Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0683030 | XP_003606450.1 | 99.041 | 417 | 4 | 0 | 1 | 417 | 1 | 417 | 0.0 | 866 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0683030 | sp|Q75IM9|IVD_ORYSJ | 88.571 | 385 | 44 | 0 | 33 | 417 | 25 | 409 | 0.0 | 724 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0683030 | G7JQF7 | 99.041 | 417 | 4 | 0 | 1 | 417 | 1 | 417 | 0.0 | 866 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0643520 | Msa0683030 | 0.908921 | 1.006830e-81 | -8.615850e-47 |
| Msa0683000 | Msa0683030 | 0.967235 | 5.337065e-127 | -8.615850e-47 |
| Msa0683030 | Msa1217950 | 0.809049 | 2.293071e-50 | -8.615850e-47 |
| Msa0481100 | Msa0683030 | 0.804086 | 2.556773e-49 | -8.615850e-47 |
| Msa0547440 | Msa0683030 | 0.851451 | 8.801019e-61 | -8.615850e-47 |
| Msa0602180 | Msa0683030 | 0.939542 | 1.066537e-99 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0683030 | MtrunA17_Chr4g0029681 | 99.041 | 417 | 4 | 0 | 1 | 417 | 1 | 417 | 0.0 | 866 |
| Msa0683030 | MtrunA17_Chr7g0242641 | 29.641 | 334 | 228 | 4 | 81 | 413 | 17 | 344 | 1.45e-44 | 158 |
| Msa0683030 | MtrunA17_Chr2g0295521 | 26.736 | 288 | 199 | 6 | 134 | 411 | 519 | 804 | 2.34e-21 | 96.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0683030 | AT3G45300.1 | 89.153 | 378 | 41 | 0 | 40 | 417 | 32 | 409 | 0.0 | 699 |
| Msa0683030 | AT3G51840.1 | 26.790 | 377 | 267 | 5 | 38 | 413 | 54 | 422 | 7.26e-42 | 153 |
| Msa0683030 | AT3G06810.1 | 26.736 | 288 | 199 | 6 | 134 | 411 | 530 | 815 | 2.28e-21 | 97.4 |
| Msa0683030 | AT5G65110.1 | 24.309 | 362 | 216 | 14 | 109 | 415 | 133 | 491 | 1.35e-11 | 67.0 |
| Msa0683030 | AT5G65110.2 | 23.889 | 360 | 222 | 13 | 109 | 416 | 133 | 492 | 1.44e-11 | 66.6 |
Find 129 sgRNAs with CRISPR-Local
Find 471 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCCTAGTTTATCCAATTTC+TGG | 0.126605 | 4_4:+45389158 | None:intergenic |
| GGATCTGTTGGTCTTTCTTA+TGG | 0.218631 | 4_4:-45390466 | Msa0683030:CDS |
| ATTCTTGTTCTAATCATCTT+TGG | 0.276096 | 4_4:+45392724 | None:intergenic |
| ATTCAGTACTGCCCAGAAAT+TGG | 0.276268 | 4_4:-45389170 | Msa0683030:CDS |
| GAGATCAGAAGAATGATTAT+TGG | 0.293324 | 4_4:-45386320 | Msa0683030:CDS |
| TGTTAACCTGTGGAAAAGTA+TGG | 0.293370 | 4_4:-45391358 | Msa0683030:CDS |
| TGCTTATTTGCAGAGGAGTA+TGG | 0.296519 | 4_4:-45390550 | Msa0683030:intron |
| GGAATCTATTACATTACTTT+TGG | 0.301187 | 4_4:+45386052 | None:intergenic |
| AGCAACACAAGTTGCTTTGC+AGG | 0.308452 | 4_4:-45386441 | Msa0683030:CDS |
| AGGTCTGAGATTCAATAATT+TGG | 0.315835 | 4_4:-45386077 | Msa0683030:three_prime_UTR |
| CATGATGTCTGGACTGGATT+TGG | 0.321758 | 4_4:-45388300 | Msa0683030:CDS |
| AGCAGTTCGGTCGTCCTATT+GGG | 0.323036 | 4_4:-45388196 | Msa0683030:CDS |
| GAGCAGTTCGGTCGTCCTAT+TGG | 0.326208 | 4_4:-45388197 | Msa0683030:CDS |
| GTTCCGGAGGAAAATGTTCT+TGG | 0.329541 | 4_4:-45389003 | Msa0683030:CDS |
| TCTGAAAAGAGTTGAGAAAA+TGG | 0.338845 | 4_4:+45392687 | None:intergenic |
| TCTTCTGATCTCACTTGTTC+CGG | 0.339052 | 4_4:+45386331 | None:intergenic |
| CTTCGAGAATTGCTTTGTTC+CGG | 0.341846 | 4_4:-45389019 | Msa0683030:CDS |
| TACTAAATAGTAAACTAATA+TGG | 0.341856 | 4_4:+45392888 | None:intergenic |
| TGGGGATCATGTGGGAGCTT+TGG | 0.343115 | 4_4:-45389874 | Msa0683030:CDS |
| TGCAAAGCTGATCGTGTAGA+TGG | 0.343954 | 4_4:-45389724 | Msa0683030:CDS |
| AAGCACATACAGATCTAATA+TGG | 0.347321 | 4_4:+45386169 | None:intergenic |
| ACCTATTGTTGGTACTGTAT+TGG | 0.353949 | 4_4:-45385947 | Msa0683030:three_prime_UTR |
| AACAAGATGTGGTGTACTAA+TGG | 0.357977 | 4_4:-45389682 | Msa0683030:CDS |
| CAGCGCTACTACTAATTTGA+AGG | 0.364024 | 4_4:-45393021 | Msa0683030:five_prime_UTR |
| GAAGAGATTAGCCGAGCTTC+AGG | 0.365845 | 4_4:-45390487 | Msa0683030:CDS |
| CCCTAGTTTATCCAATTTCT+GGG | 0.377085 | 4_4:+45389159 | None:intergenic |
| TCAACTTTGAAGCTTATCTC+TGG | 0.384395 | 4_4:-45389894 | Msa0683030:intron |
| TTGCAGGCGATACAATGTTT+AGG | 0.392157 | 4_4:-45386425 | Msa0683030:CDS |
| CTTCGATGACACTCAGATAC+AGG | 0.395511 | 4_4:-45392605 | Msa0683030:intron |
| TTGAAGCAAATCATTCCTCT+TGG | 0.399533 | 4_4:-45386128 | Msa0683030:three_prime_UTR |
| TATTGTATATGATATGATAT+CGG | 0.403469 | 4_4:+45392792 | None:intergenic |
| ATGGAATGGGTGTAGTGTTT+TGG | 0.406758 | 4_4:+45392907 | None:intergenic |
| GGAGTCTATGTCATGATGTC+TGG | 0.411304 | 4_4:-45388311 | Msa0683030:CDS |
| TGGGGAGTTTCAGTTTATAC+AGG | 0.418608 | 4_4:-45388177 | Msa0683030:intron |
| ATGCGAAGCTCTACGAGATC+GGG | 0.423929 | 4_4:-45386355 | Msa0683030:CDS |
| TGCTCTCTTTGTCGAACATA+AGG | 0.427952 | 4_4:+45388215 | None:intergenic |
| TTACCAGTTGATTGATACAT+AGG | 0.435581 | 4_4:+45390431 | None:intergenic |
| ATAAACTGAAACTCCCCAAT+AGG | 0.438380 | 4_4:+45388182 | None:intergenic |
| GCAGAGGAGTATGGAGGGCT+TGG | 0.439310 | 4_4:-45390541 | Msa0683030:intron |
| TTCCGGAGGAAAATGTTCTT+GGG | 0.444098 | 4_4:-45389002 | Msa0683030:CDS |
| TGCAGTGCCTTACCTATTGT+TGG | 0.444742 | 4_4:-45385958 | Msa0683030:three_prime_UTR |
| TAACCTATGTATCAATCAAC+TGG | 0.447355 | 4_4:-45390434 | Msa0683030:intron |
| GACGCAACAGCAGGGTCAAA+AGG | 0.449570 | 4_4:-45389463 | Msa0683030:CDS |
| CATACTAATGTTTGAGCAGT+TGG | 0.450831 | 4_4:+45389658 | None:intergenic |
| CAACTTTGAAGCTTATCTCT+GGG | 0.454090 | 4_4:-45389893 | Msa0683030:intron |
| ACAAGATGTGGTGTACTAAT+GGG | 0.455535 | 4_4:-45389681 | Msa0683030:CDS |
| ATCATCGAGAAGGGAATGCC+TGG | 0.460608 | 4_4:-45389427 | Msa0683030:CDS |
| TAGCTGAATCAGATAGTAGT+AGG | 0.469758 | 4_4:+45392972 | None:intergenic |
| GGCAGTTGAGATAAGGATGA+AGG | 0.474878 | 4_4:+45392928 | None:intergenic |
| ATAGTAAACTAATATGGAAT+GGG | 0.480097 | 4_4:+45392894 | None:intergenic |
| ATACATCTTTACAGTCTTCA+CGG | 0.482149 | 4_4:-45388036 | Msa0683030:intron |
| AATAGTAAACTAATATGGAA+TGG | 0.482151 | 4_4:+45392893 | None:intergenic |
| GAGTATGGAGGGCTTGGTCT+AGG | 0.483008 | 4_4:-45390535 | Msa0683030:CDS |
| TCCAATACAGTACCAACAAT+AGG | 0.483846 | 4_4:+45385946 | None:intergenic |
| CAATGACATGCTAGTCCCCT+TGG | 0.484232 | 4_4:-45386278 | Msa0683030:exon |
| GAAAATGTTCTTGGGAAAGA+AGG | 0.485757 | 4_4:-45388994 | Msa0683030:CDS |
| ATGGGAGAATTTAATCTCCA+TGG | 0.486600 | 4_4:-45391339 | Msa0683030:CDS |
| TGATTGTTGATTACTTAGCT+TGG | 0.489097 | 4_4:+45392757 | None:intergenic |
| TTCCTCTTGGAAAATGATGA+TGG | 0.489349 | 4_4:-45386115 | Msa0683030:three_prime_UTR |
| TTGATTACTTAGCTTGGTGT+TGG | 0.494607 | 4_4:+45392763 | None:intergenic |
| TATTGGACGTGATCTCTTCA+AGG | 0.497284 | 4_4:-45386303 | Msa0683030:CDS |
| GATGCGAAGCTCTACGAGAT+CGG | 0.508301 | 4_4:-45386356 | Msa0683030:CDS |
| CTATGTCATGATGTCTGGAC+TGG | 0.510832 | 4_4:-45388306 | Msa0683030:CDS |
| CTTGTATCATTGTATAGCAA+TGG | 0.513555 | 4_4:-45390509 | Msa0683030:CDS |
| CTCCATGGGATTACTGCACC+AGG | 0.518403 | 4_4:-45391324 | Msa0683030:intron |
| GTTCTAATCATCTTTGGCAA+CGG | 0.520212 | 4_4:+45392730 | None:intergenic |
| GCAAAGCTGATCGTGTAGAT+GGG | 0.520482 | 4_4:-45389723 | Msa0683030:CDS |
| GCTTATCTCTGGGGATCATG+TGG | 0.520908 | 4_4:-45389883 | Msa0683030:CDS |
| TACTAATTTCAGGATTGTGC+TGG | 0.524388 | 4_4:-45386488 | Msa0683030:intron |
| AGCCGAGCTTCAGGATCTGT+TGG | 0.526762 | 4_4:-45390478 | Msa0683030:CDS |
| TTATGTGTATTCTGTAGCTC+GGG | 0.527867 | 4_4:-45387931 | Msa0683030:CDS |
| CTACTACTAATTTGAAGGAA+AGG | 0.528150 | 4_4:-45393016 | Msa0683030:five_prime_UTR |
| AAGCTCTACGAGATCGGGGC+CGG | 0.529045 | 4_4:-45386350 | Msa0683030:CDS |
| ATACAATGTTTAGGTGGAAA+CGG | 0.532313 | 4_4:-45386416 | Msa0683030:CDS |
| CTTATGTGTATTCTGTAGCT+CGG | 0.533799 | 4_4:-45387932 | Msa0683030:CDS |
| CATGCTGACAACATCAGATC+CGG | 0.534166 | 4_4:+45389750 | None:intergenic |
| CACTGCATTTATCATCGAGA+AGG | 0.536640 | 4_4:-45389437 | Msa0683030:CDS |
| TACAGTACCAACAATAGGTA+AGG | 0.541934 | 4_4:+45385951 | None:intergenic |
| CGAGAATTGCTTTGTTCCGG+AGG | 0.542177 | 4_4:-45389016 | Msa0683030:CDS |
| AAAATGTTCTTGGGAAAGAA+GGG | 0.542799 | 4_4:-45388993 | Msa0683030:CDS |
| TTGACTGGAACTGAGCGCCT+CGG | 0.545543 | 4_4:-45386252 | Msa0683030:three_prime_UTR |
| CCCAGAAATTGGATAAACTA+GGG | 0.547673 | 4_4:-45389159 | Msa0683030:CDS |
| ATAATTTGTGTGATCAATGT+GGG | 0.552867 | 4_4:+45391866 | None:intergenic |
| TGGGAGAATTTAATCTCCAT+GGG | 0.554351 | 4_4:-45391338 | Msa0683030:CDS |
| TCAGTTCCAGTCAAAATCCA+AGG | 0.562699 | 4_4:+45386261 | None:intergenic |
| GTTAACCTGTGGAAAAGTAT+GGG | 0.571158 | 4_4:-45391357 | Msa0683030:CDS |
| GCCCAGAAATTGGATAAACT+AGG | 0.571430 | 4_4:-45389160 | Msa0683030:CDS |
| CTGCATAATACCAAGGGGAC+CGG | 0.575815 | 4_4:+45388259 | None:intergenic |
| AACATAAATAACTGTACTGG+AGG | 0.582553 | 4_4:+45386031 | None:intergenic |
| GTTCGACAAAGAGAGCAGTT+CGG | 0.583442 | 4_4:-45388209 | Msa0683030:CDS |
| TATGTGAACGAGTATCCAAC+CGG | 0.585904 | 4_4:-45386392 | Msa0683030:CDS |
| CAGGCGATACAATGTTTAGG+TGG | 0.587882 | 4_4:-45386422 | Msa0683030:CDS |
| AATAATTTGTGTGATCAATG+TGG | 0.589596 | 4_4:+45391865 | None:intergenic |
| TACTTAACGGGAACAAGATG+TGG | 0.589905 | 4_4:-45389693 | Msa0683030:CDS |
| GACCAACAGATCCTGAAGCT+CGG | 0.593218 | 4_4:+45390476 | None:intergenic |
| AACTTTGAAGCTTATCTCTG+GGG | 0.593388 | 4_4:-45389892 | Msa0683030:intron |
| TCACACAAATTATTTCCCAA+AGG | 0.594666 | 4_4:-45391856 | Msa0683030:intron |
| TACCTGGTGCAGTAATCCCA+TGG | 0.597662 | 4_4:+45391322 | None:intergenic |
| ATCGAAGAGGAATGAAGTAG+TGG | 0.599042 | 4_4:+45392621 | None:intergenic |
| CAAAGCTGATCGTGTAGATG+GGG | 0.599234 | 4_4:-45389722 | Msa0683030:CDS |
| CGCATCTCTGAGGAGACGAC+CGG | 0.599352 | 4_4:+45386373 | None:intergenic |
| GTAGCTCGGGACTGTGACAA+CGG | 0.602533 | 4_4:-45387918 | Msa0683030:CDS |
| TTATTTGCAGAGGAGTATGG+AGG | 0.603677 | 4_4:-45390547 | Msa0683030:intron |
| CTTATCTCTGGGGATCATGT+GGG | 0.603883 | 4_4:-45389882 | Msa0683030:CDS |
| TATTTGCAGAGGAGTATGGA+GGG | 0.604314 | 4_4:-45390546 | Msa0683030:intron |
| CAGTTCCAGTCAAAATCCAA+GGG | 0.606897 | 4_4:+45386262 | None:intergenic |
| ACTGCATTTATCATCGAGAA+GGG | 0.609190 | 4_4:-45389436 | Msa0683030:CDS |
| ATCAATGTGGGAAGCATGAG+GGG | 0.621018 | 4_4:+45391878 | None:intergenic |
| GTTCTTGGGAAAGAAGGGAA+AGG | 0.623097 | 4_4:-45388988 | Msa0683030:intron |
| TGTCTGGACTGGATTTGGAA+AGG | 0.626784 | 4_4:-45388295 | Msa0683030:CDS |
| ACATGACTGCATAATACCAA+GGG | 0.627108 | 4_4:+45388253 | None:intergenic |
| CTCTTTGTCGAACATAAGGA+AGG | 0.631959 | 4_4:+45388219 | None:intergenic |
| GTATCTGAGTGTCATCGAAG+AGG | 0.631985 | 4_4:+45392608 | None:intergenic |
| TTGGATAAACTAGGGATGCG+AGG | 0.637106 | 4_4:-45389151 | Msa0683030:CDS |
| TCTCTGAGGAGACGACCGGT+TGG | 0.638940 | 4_4:+45386377 | None:intergenic |
| TCATCGAGAAGGGAATGCCT+GGG | 0.639355 | 4_4:-45389426 | Msa0683030:intron |
| GACATGACTGCATAATACCA+AGG | 0.639799 | 4_4:+45388252 | None:intergenic |
| TAATTTAGGATGTTAACCTG+TGG | 0.645371 | 4_4:-45391368 | Msa0683030:intron |
| GATCAATGTGGGAAGCATGA+GGG | 0.653184 | 4_4:+45391877 | None:intergenic |
| GCAGTTCGGTCGTCCTATTG+GGG | 0.659632 | 4_4:-45388195 | Msa0683030:CDS |
| TATATGATATGATATCGGTA+TGG | 0.660165 | 4_4:+45392797 | None:intergenic |
| TGATCAATGTGGGAAGCATG+AGG | 0.662322 | 4_4:+45391876 | None:intergenic |
| CGTAGAGCTTCGCATCTCTG+AGG | 0.668421 | 4_4:+45386363 | None:intergenic |
| TGCGAAGCTCTACGAGATCG+GGG | 0.673463 | 4_4:-45386354 | Msa0683030:CDS |
| CAACGGAAAAGTTGACCCAA+AGG | 0.674588 | 4_4:-45387901 | Msa0683030:intron |
| AAAGCTGATCGTGTAGATGG+GGG | 0.688332 | 4_4:-45389721 | Msa0683030:CDS |
| AGTTCCAGTCAAAATCCAAG+GGG | 0.744256 | 4_4:+45386263 | None:intergenic |
| TTACAAAGGAATCATCTCCG+AGG | 0.747071 | 4_4:+45386235 | None:intergenic |
| CATGACTGCATAATACCAAG+GGG | 0.751632 | 4_4:+45388254 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTTAAACTTTTTCATT+TGG | - | chr4_4:45386413-45386432 | Msa0683030:CDS | 10.0% |
| !!! | AAATTTAAACTTTTTCATTT+GGG | - | chr4_4:45386414-45386433 | Msa0683030:CDS | 10.0% |
| !! | TTAAACAAAGAAAATTAAAA+TGG | + | chr4_4:45389832-45389851 | None:intergenic | 10.0% |
| !! | AATTGAAAAATTCAATTAAA+GGG | + | chr4_4:45391153-45391172 | None:intergenic | 10.0% |
| !! | TAATTGAAAAATTCAATTAA+AGG | + | chr4_4:45391154-45391173 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAAAGAAGAA+TGG | - | chr4_4:45391518-45391537 | Msa0683030:intron | 10.0% |
| !! | AAGATAATAAAAAAAATCAA+AGG | + | chr4_4:45391726-45391745 | None:intergenic | 10.0% |
| !! | TACTAAATAGTAAACTAATA+TGG | + | chr4_4:45386048-45386067 | None:intergenic | 15.0% |
| !! | TATTGTATATGATATGATAT+CGG | + | chr4_4:45386144-45386163 | None:intergenic | 15.0% |
| !!! | TTTTACAACTAACTAAAAAT+GGG | + | chr4_4:45386396-45386415 | None:intergenic | 15.0% |
| !!! | TTTTTACAACTAACTAAAAA+TGG | + | chr4_4:45386397-45386416 | None:intergenic | 15.0% |
| !!! | TTTTACAAAAACAGAATAAT+GGG | + | chr4_4:45386470-45386489 | None:intergenic | 15.0% |
| !!! | TTTTTACAAAAACAGAATAA+TGG | + | chr4_4:45386471-45386490 | None:intergenic | 15.0% |
| !!! | AAAAATTGAACTTTTTTAGT+TGG | - | chr4_4:45386487-45386506 | Msa0683030:intron | 15.0% |
| !!! | AAAATTGAACTTTTTTAGTT+GGG | - | chr4_4:45386488-45386507 | Msa0683030:intron | 15.0% |
| !!! | TTTTATGAAAACAGATAAAT+GGG | + | chr4_4:45386895-45386914 | None:intergenic | 15.0% |
| !!! | TTTTTATGAAAACAGATAAA+TGG | + | chr4_4:45386896-45386915 | None:intergenic | 15.0% |
| !!! | AATTTGAACTTTTTTTCATT+TGG | - | chr4_4:45386914-45386933 | Msa0683030:intron | 15.0% |
| !!! | ATTTGAACTTTTTTTCATTT+GGG | - | chr4_4:45386915-45386934 | Msa0683030:intron | 15.0% |
| !! | ATTTAATAATACATACCTTT+GGG | + | chr4_4:45387095-45387114 | None:intergenic | 15.0% |
| !!! | ATTTTAGAATACAGAAAATA+CGG | + | chr4_4:45387709-45387728 | None:intergenic | 15.0% |
| !!! | ATTTTATATGTCTTACAATT+TGG | + | chr4_4:45389096-45389115 | None:intergenic | 15.0% |
| !!! | GTTTTATACTATATATATGT+GGG | + | chr4_4:45389357-45389376 | None:intergenic | 15.0% |
| !! | ACATATATATAGTATAAAAC+CGG | - | chr4_4:45389357-45389376 | Msa0683030:intron | 15.0% |
| !! | ACTGTAATAAAATGATTTAT+CGG | + | chr4_4:45389688-45389707 | None:intergenic | 15.0% |
| !!! | TAGTCTTTATTATTTTTGAA+AGG | - | chr4_4:45389985-45390004 | Msa0683030:intron | 15.0% |
| !! | ATAAAATAAACCCTTAATTT+GGG | + | chr4_4:45390206-45390225 | None:intergenic | 15.0% |
| !! | AATAAAATAAACCCTTAATT+TGG | + | chr4_4:45390207-45390226 | None:intergenic | 15.0% |
| !!! | AATGAAAATTACTTTTACAA+AGG | + | chr4_4:45392715-45392734 | None:intergenic | 15.0% |
| !!! | AACCTTTTTGAATAATAAAA+AGG | - | chr4_4:45392934-45392953 | Msa0683030:five_prime_UTR | 15.0% |
| !!! | ACCTTTTTGAATAATAAAAA+GGG | - | chr4_4:45392935-45392954 | Msa0683030:five_prime_UTR | 15.0% |
| !!! | TAGGATAGTTATTTTATTCA+CGG | + | chr4_4:45385945-45385964 | None:intergenic | 20.0% |
| !! | ATAGTAAACTAATATGGAAT+GGG | + | chr4_4:45386042-45386061 | None:intergenic | 20.0% |
| !! | AATAGTAAACTAATATGGAA+TGG | + | chr4_4:45386043-45386062 | None:intergenic | 20.0% |
| !! | TTTACAACTAACTAAAAATG+GGG | + | chr4_4:45386395-45386414 | None:intergenic | 20.0% |
| !! | TTTACAAAAACAGAATAATG+GGG | + | chr4_4:45386469-45386488 | None:intergenic | 20.0% |
| !! | GTTACAAAAACAGATAAATT+GGG | + | chr4_4:45386540-45386559 | None:intergenic | 20.0% |
| !! | TGTTACAAAAACAGATAAAT+TGG | + | chr4_4:45386541-45386560 | None:intergenic | 20.0% |
| !!! | AATTTGAACTTTTTATACCT+TGG | - | chr4_4:45386560-45386579 | Msa0683030:intron | 20.0% |
| !! | TTTATGAAAACAGATAAATG+GGG | + | chr4_4:45386894-45386913 | None:intergenic | 20.0% |
| !! | CATTTAATAATACATACCTT+TGG | + | chr4_4:45387096-45387115 | None:intergenic | 20.0% |
| !! | TCCTTCATATAAAAACATTA+GGG | - | chr4_4:45387387-45387406 | Msa0683030:intron | 20.0% |
| !!! | TTTTTAGTAAGAGACTAAAT+TGG | - | chr4_4:45387427-45387446 | Msa0683030:intron | 20.0% |
| !!! | TTTTAGTAAGAGACTAAATT+GGG | - | chr4_4:45387428-45387447 | Msa0683030:intron | 20.0% |
| !!! | GAAAATAAAAAAGTATTACC+TGG | + | chr4_4:45387630-45387649 | None:intergenic | 20.0% |
| !!! | TTTTAGAATACAGAAAATAC+GGG | + | chr4_4:45387708-45387727 | None:intergenic | 20.0% |
| !!! | TGTAATTTCTAGAATCATTT+TGG | - | chr4_4:45387895-45387914 | Msa0683030:intron | 20.0% |
| !! | ATTACACAAATTGAATGATA+TGG | - | chr4_4:45388236-45388255 | Msa0683030:CDS | 20.0% |
| !! | AAATTGAATGATATGGAATA+GGG | - | chr4_4:45388243-45388262 | Msa0683030:CDS | 20.0% |
| !! | CTTAAATATTTGATATTCCA+AGG | - | chr4_4:45389129-45389148 | Msa0683030:intron | 20.0% |
| !!! | GGTTTTATACTATATATATG+TGG | + | chr4_4:45389358-45389377 | None:intergenic | 20.0% |
| !!! | ATATCTAAGATCTGTTTTAA+AGG | - | chr4_4:45390057-45390076 | Msa0683030:intron | 20.0% |
| !! | AGTAAAACTTCAAAAATAAG+TGG | + | chr4_4:45390170-45390189 | None:intergenic | 20.0% |
| !!! | TCTGTTTCTTATTGTTAATA+CGG | - | chr4_4:45391067-45391086 | Msa0683030:intron | 20.0% |
| !! | AAAATGTAAACATCATTCTT+GGG | - | chr4_4:45391127-45391146 | Msa0683030:intron | 20.0% |
| !! | ATGAATACAAAGAAAACTAT+AGG | - | chr4_4:45391338-45391357 | Msa0683030:CDS | 20.0% |
| !!! | AATTATTAAGAAAGCCTTTT+TGG | - | chr4_4:45391697-45391716 | Msa0683030:intron | 20.0% |
| !!! | AAGATTTTTAAAGATTGTGT+AGG | + | chr4_4:45391890-45391909 | None:intergenic | 20.0% |
| !! | TGATTTATGATAGAGAATTA+TGG | - | chr4_4:45391992-45392011 | Msa0683030:intron | 20.0% |
| !!! | AATGATGATGGAAAAAAAAA+AGG | - | chr4_4:45392830-45392849 | Msa0683030:five_prime_UTR | 20.0% |
| !! | AAAAACATAAATAACTGTAC+TGG | + | chr4_4:45392908-45392927 | None:intergenic | 20.0% |
| !!! | ACCCTTTTTATTATTCAAAA+AGG | + | chr4_4:45392939-45392958 | None:intergenic | 20.0% |
| ! | TATATGATATGATATCGGTA+TGG | + | chr4_4:45386139-45386158 | None:intergenic | 25.0% |
| ! | ATTCTTGTTCTAATCATCTT+TGG | + | chr4_4:45386212-45386231 | None:intergenic | 25.0% |
| !! | TCTTCTATTTTCTATCAACT+TGG | - | chr4_4:45386941-45386960 | Msa0683030:intron | 25.0% |
| !! | ATTGCATATCATGCTTTTAA+TGG | - | chr4_4:45386973-45386992 | Msa0683030:intron | 25.0% |
| !! | ATAATTTGTGTGATCAATGT+GGG | + | chr4_4:45387070-45387089 | None:intergenic | 25.0% |
| !! | AATAATTTGTGTGATCAATG+TGG | + | chr4_4:45387071-45387090 | None:intergenic | 25.0% |
| !! | GTATTATTTATCTTTTGCTG+GGG | + | chr4_4:45387190-45387209 | None:intergenic | 25.0% |
| !! | GGTATTATTTATCTTTTGCT+GGG | + | chr4_4:45387191-45387210 | None:intergenic | 25.0% |
| !! | TGGTATTATTTATCTTTTGC+TGG | + | chr4_4:45387192-45387211 | None:intergenic | 25.0% |
| !!! | TAGTCTGTCATTTTCAAATT+GGG | - | chr4_4:45387215-45387234 | Msa0683030:intron | 25.0% |
| ! | ACAAATTAGTCCATCTATTA+AGG | - | chr4_4:45387239-45387258 | Msa0683030:intron | 25.0% |
| ! | TACGATTAACATACTAACAT+CGG | - | chr4_4:45387312-45387331 | Msa0683030:intron | 25.0% |
| ! | TTCTGTTATAATGAATGATC+CGG | - | chr4_4:45387353-45387372 | Msa0683030:intron | 25.0% |
| ! | GTCCTTCATATAAAAACATT+AGG | - | chr4_4:45387386-45387405 | Msa0683030:intron | 25.0% |
| ! | CCTTCATATAAAAACATTAG+GGG | - | chr4_4:45387388-45387407 | Msa0683030:intron | 25.0% |
| !!! | GTTGTGTTTTGATCTAATTT+AGG | - | chr4_4:45387551-45387570 | Msa0683030:intron | 25.0% |
| ! | GATTATATGTATGTGATTCT+AGG | + | chr4_4:45387736-45387755 | None:intergenic | 25.0% |
| ! | CATTGTCTCTTTAATACAAA+CGG | - | chr4_4:45387849-45387868 | Msa0683030:intron | 25.0% |
| !!! | ATTTTGGAATATTGATAACG+TGG | - | chr4_4:45387911-45387930 | Msa0683030:CDS | 25.0% |
| ! | TACAATTTCAAAGACCAAAT+TGG | - | chr4_4:45387955-45387974 | Msa0683030:intron | 25.0% |
| ! | TTACTCTACTTTACTTTGTT+TGG | - | chr4_4:45387986-45388005 | Msa0683030:intron | 25.0% |
| ! | AATTTGTGTAATACTGCAAA+AGG | + | chr4_4:45388228-45388247 | None:intergenic | 25.0% |
| ! | CAAATTGAATGATATGGAAT+AGG | - | chr4_4:45388242-45388261 | Msa0683030:CDS | 25.0% |
| !!! | AGTATTTTTGTTTCTGTTCA+TGG | + | chr4_4:45388626-45388645 | None:intergenic | 25.0% |
| ! | GAATTACACAACATTAAACT+AGG | + | chr4_4:45388675-45388694 | None:intergenic | 25.0% |
| !! | TATTTTCCAGCTATAAACTA+AGG | + | chr4_4:45389620-45389639 | None:intergenic | 25.0% |
| ! | GTAATAAAATGATTTATCGG+TGG | + | chr4_4:45389685-45389704 | None:intergenic | 25.0% |
| ! | TAATCTTTATATTGCTCGTT+TGG | - | chr4_4:45390011-45390030 | Msa0683030:intron | 25.0% |
| ! | AAAATAAGTGGAAGATTAAG+AGG | + | chr4_4:45390158-45390177 | None:intergenic | 25.0% |
| !!! | ATTTTGGAAAATTATGCAAC+TGG | + | chr4_4:45390476-45390495 | None:intergenic | 25.0% |
| ! | CCTGAACAAAAAGAAAATAA+TGG | + | chr4_4:45390604-45390623 | None:intergenic | 25.0% |
| !! | CCATTATTTTCTTTTTGTTC+AGG | - | chr4_4:45390601-45390620 | Msa0683030:intron | 25.0% |
| ! | TTTATACAGGTTCATTTCAT+CGG | - | chr4_4:45390769-45390788 | Msa0683030:intron | 25.0% |
| !! | TTCATTGTCAATTGATCTTT+TGG | - | chr4_4:45390849-45390868 | Msa0683030:intron | 25.0% |
| ! | AACAATAAGAAACAGATTTG+AGG | + | chr4_4:45391063-45391082 | None:intergenic | 25.0% |
| ! | GAAAATGTAAACATCATTCT+TGG | - | chr4_4:45391126-45391145 | Msa0683030:intron | 25.0% |
| ! | CCTTATCTTGTCTAATAATA+GGG | + | chr4_4:45391189-45391208 | None:intergenic | 25.0% |
| ! | ACCTTATCTTGTCTAATAAT+AGG | + | chr4_4:45391190-45391209 | None:intergenic | 25.0% |
| ! | TTATTAGACAAGATAAGGTT+AGG | - | chr4_4:45391191-45391210 | Msa0683030:intron | 25.0% |
| ! | AAAAAAGAAGAATGGTAACA+AGG | - | chr4_4:45391526-45391545 | Msa0683030:intron | 25.0% |
| !!! | ATCAGACAATTTTGAGATTA+AGG | - | chr4_4:45391557-45391576 | Msa0683030:intron | 25.0% |
| !!! | AATTGCAATTTTGATAACAC+CGG | - | chr4_4:45391670-45391689 | Msa0683030:intron | 25.0% |
| ! | AAAATACCAAATTACAAGAG+TGG | + | chr4_4:45391756-45391775 | None:intergenic | 25.0% |
| ! | ATTAACTTTCATGATTTCGA+GGG | + | chr4_4:45391862-45391881 | None:intergenic | 25.0% |
| ! | TATTAACTTTCATGATTTCG+AGG | + | chr4_4:45391863-45391882 | None:intergenic | 25.0% |
| !!! | GGGATTTTAAAAGACTATTT+TGG | + | chr4_4:45391927-45391946 | None:intergenic | 25.0% |
| ! | TGAATAGTATGATGCAAAAA+AGG | + | chr4_4:45392402-45392421 | None:intergenic | 25.0% |
| !! | GGAATCTATTACATTACTTT+TGG | + | chr4_4:45392884-45392903 | None:intergenic | 25.0% |
| CTACTACTAATTTGAAGGAA+AGG | - | chr4_4:45385917-45385936 | Msa0683030:three_prime_UTR | 30.0% | |
| ! | TGATTGTTGATTACTTAGCT+TGG | + | chr4_4:45386179-45386198 | None:intergenic | 30.0% |
| TCTGAAAAGAGTTGAGAAAA+TGG | + | chr4_4:45386249-45386268 | None:intergenic | 30.0% | |
| TAAGATGTTAGAGAAAGTAG+TGG | + | chr4_4:45386358-45386377 | None:intergenic | 30.0% | |
| !!! | GTCAATCTTATTTTTGACCA+AGG | + | chr4_4:45386580-45386599 | None:intergenic | 30.0% |
| TTGAAATTCAGTGACTTTCA+TGG | - | chr4_4:45386708-45386727 | Msa0683030:intron | 30.0% | |
| TTTCTCTTTCACTAAGGTTA+TGG | + | chr4_4:45386745-45386764 | None:intergenic | 30.0% | |
| GTATCATTTCTCTTTCACTA+AGG | + | chr4_4:45386751-45386770 | None:intergenic | 30.0% | |
| ! | CTATTTTCTATCAACTTGGT+TGG | - | chr4_4:45386945-45386964 | Msa0683030:intron | 30.0% |
| TCACACAAATTATTTCCCAA+AGG | - | chr4_4:45387077-45387096 | Msa0683030:intron | 30.0% | |
| ! | TTGAAAATGACAGACTAGTT+TGG | + | chr4_4:45387212-45387231 | None:intergenic | 30.0% |
| !!! | CTAGTCTGTCATTTTCAAAT+TGG | - | chr4_4:45387214-45387233 | Msa0683030:intron | 30.0% |
| !!! | AGTCTGTCATTTTCAAATTG+GGG | - | chr4_4:45387216-45387235 | Msa0683030:intron | 30.0% |
| TCCATCTATTAAGGAGTTAA+AGG | - | chr4_4:45387248-45387267 | Msa0683030:intron | 30.0% | |
| CCATCTATTAAGGAGTTAAA+GGG | - | chr4_4:45387249-45387268 | Msa0683030:intron | 30.0% | |
| GGATCATTCATTATAACAGA+AGG | + | chr4_4:45387354-45387373 | None:intergenic | 30.0% | |
| TCTGTTATAATGAATGATCC+GGG | - | chr4_4:45387354-45387373 | Msa0683030:intron | 30.0% | |
| !! | CCCCTAATGTTTTTATATGA+AGG | + | chr4_4:45387391-45387410 | None:intergenic | 30.0% |
| AAAACATTAGGGGATTAACT+TGG | - | chr4_4:45387398-45387417 | Msa0683030:intron | 30.0% | |
| AAACATTAGGGGATTAACTT+GGG | - | chr4_4:45387399-45387418 | Msa0683030:intron | 30.0% | |
| AAATTAGTAAGCACCCAATT+TGG | + | chr4_4:45387475-45387494 | None:intergenic | 30.0% | |
| ! | TAATTTAGGATGTTAACCTG+TGG | - | chr4_4:45387565-45387584 | Msa0683030:intron | 30.0% |
| TGATAACATATCCAAACAGA+AGG | + | chr4_4:45387767-45387786 | None:intergenic | 30.0% | |
| AAGAGACAATGACATTATGT+TGG | + | chr4_4:45387840-45387859 | None:intergenic | 30.0% | |
| !! | ATATTGATAACGTGGATGAT+TGG | - | chr4_4:45387919-45387938 | Msa0683030:CDS | 30.0% |
| !! | TATTGATAACGTGGATGATT+GGG | - | chr4_4:45387920-45387939 | Msa0683030:CDS | 30.0% |
| GAGTAACTAACTATCCAATT+TGG | + | chr4_4:45387972-45387991 | None:intergenic | 30.0% | |
| TTCACTATCTCATAGTATAC+AGG | + | chr4_4:45388095-45388114 | None:intergenic | 30.0% | |
| AGAATGTAGATACTATTTGC+AGG | - | chr4_4:45388163-45388182 | Msa0683030:intron | 30.0% | |
| ATTTCAAATCGTCCTTCTTT+AGG | - | chr4_4:45388272-45388291 | Msa0683030:CDS | 30.0% | |
| TAAATCAGAACACCTAAAGA+AGG | + | chr4_4:45388287-45388306 | None:intergenic | 30.0% | |
| CAAATAAGCAGACATAGAAT+TGG | + | chr4_4:45388373-45388392 | None:intergenic | 30.0% | |
| CTTGTATCATTGTATAGCAA+TGG | - | chr4_4:45388424-45388443 | Msa0683030:intron | 30.0% | |
| TAACCTATGTATCAATCAAC+TGG | - | chr4_4:45388499-45388518 | Msa0683030:intron | 30.0% | |
| TTACCAGTTGATTGATACAT+AGG | + | chr4_4:45388505-45388524 | None:intergenic | 30.0% | |
| ATCAATCAACTGGTAATTGA+AGG | - | chr4_4:45388509-45388528 | Msa0683030:intron | 30.0% | |
| TCAATCAACTGGTAATTGAA+GGG | - | chr4_4:45388510-45388529 | Msa0683030:intron | 30.0% | |
| ! | CAATTTTTAAACGAGTCTTC+AGG | - | chr4_4:45388562-45388581 | Msa0683030:intron | 30.0% |
| !!! | TTTTTTGTTTAGGTGAGGAA+TGG | - | chr4_4:45388597-45388616 | Msa0683030:intron | 30.0% |
| GAAACAAAAATACTTGCCAA+AGG | - | chr4_4:45388632-45388651 | Msa0683030:intron | 30.0% | |
| ! | CAACTAGTTATGAGCATTTT+TGG | + | chr4_4:45388766-45388785 | None:intergenic | 30.0% |
| AAAGGAGTTGAAGGAATTAA+AGG | - | chr4_4:45388832-45388851 | Msa0683030:intron | 30.0% | |
| CTATTAATGAGCACAAGAAA+TGG | + | chr4_4:45388952-45388971 | None:intergenic | 30.0% | |
| CTTAACTGTAGACAAACAAA+TGG | + | chr4_4:45388996-45389015 | None:intergenic | 30.0% | |
| AAAACCGGATGTAATAATGT+AGG | - | chr4_4:45389372-45389391 | Msa0683030:intron | 30.0% | |
| TATGCCTACATTATTACATC+CGG | + | chr4_4:45389379-45389398 | None:intergenic | 30.0% | |
| !! | TATCACAAAACTTGTTGTCA+AGG | + | chr4_4:45389546-45389565 | None:intergenic | 30.0% |
| TTGATTCCTTAGTTTATAGC+TGG | - | chr4_4:45389611-45389630 | Msa0683030:intron | 30.0% | |
| ! | AGCTGGAAAATATCCTTTTA+TGG | - | chr4_4:45389628-45389647 | Msa0683030:intron | 30.0% |
| TTCATGTACACTTCCATAAA+AGG | + | chr4_4:45389644-45389663 | None:intergenic | 30.0% | |
| TAAAATCAAGTGGTTGGAAA+TGG | + | chr4_4:45389856-45389875 | None:intergenic | 30.0% | |
| ATCTTGTCAGTAAAATCAAG+TGG | + | chr4_4:45389866-45389885 | None:intergenic | 30.0% | |
| ! | ACTGACAAGATAGAATTTTG+TGG | - | chr4_4:45389875-45389894 | Msa0683030:CDS | 30.0% |
| ! | CTGACAAGATAGAATTTTGT+GGG | - | chr4_4:45389876-45389895 | Msa0683030:CDS | 30.0% |
| AAAATGTTCTTGGGAAAGAA+GGG | - | chr4_4:45389940-45389959 | Msa0683030:intron | 30.0% | |
| ! | TAAGAGAGTAATTTTGCATC+TGG | - | chr4_4:45390088-45390107 | Msa0683030:intron | 30.0% |
| ! | AAATAAACCCTTAATTTGGG+AGG | + | chr4_4:45390203-45390222 | None:intergenic | 30.0% |
| ! | ATAGTCTCACAACAAACTTT+TGG | + | chr4_4:45390247-45390266 | None:intergenic | 30.0% |
| ! | ATGTGTCAATCTAGTGATTT+TGG | + | chr4_4:45390492-45390511 | None:intergenic | 30.0% |
| GATTCACCATACAATACAAA+GGG | + | chr4_4:45390825-45390844 | None:intergenic | 30.0% | |
| AGATTCACCATACAATACAA+AGG | + | chr4_4:45390826-45390845 | None:intergenic | 30.0% | |
| !! | TCAATTGATCTTTTGGTTAC+AGG | - | chr4_4:45390856-45390875 | Msa0683030:intron | 30.0% |
| !! | CAATTGATCTTTTGGTTACA+GGG | - | chr4_4:45390857-45390876 | Msa0683030:intron | 30.0% |
| !! | AATTGATCTTTTGGTTACAG+GGG | - | chr4_4:45390858-45390877 | Msa0683030:intron | 30.0% |
| ATACATCTTTACAGTCTTCA+CGG | - | chr4_4:45390897-45390916 | Msa0683030:intron | 30.0% | |
| TCGATAATGTTCTTCATTTC+AGG | - | chr4_4:45390977-45390996 | Msa0683030:intron | 30.0% | |
| AATAAGAAACAGATTTGAGG+AGG | + | chr4_4:45391060-45391079 | None:intergenic | 30.0% | |
| CCCTATTATTAGACAAGATA+AGG | - | chr4_4:45391186-45391205 | Msa0683030:intron | 30.0% | |
| CTTCTTAGTATGGAATCAAA+AGG | + | chr4_4:45391279-45391298 | None:intergenic | 30.0% | |
| !! | GAATGAATGTTTTCAAGATC+AGG | - | chr4_4:45391363-45391382 | Msa0683030:CDS | 30.0% |
| ! | AGGGTATCATGATCATAAAA+AGG | - | chr4_4:45391407-45391426 | Msa0683030:intron | 30.0% |
| !!! | ATTCTAGGTAATTTTTGGGT+AGG | + | chr4_4:45391443-45391462 | None:intergenic | 30.0% |
| ACCCAAAAATTACCTAGAAT+TGG | - | chr4_4:45391443-45391462 | Msa0683030:intron | 30.0% | |
| ! | CCCAATTCTAGGTAATTTTT+GGG | + | chr4_4:45391447-45391466 | None:intergenic | 30.0% |
| CCCAAAAATTACCTAGAATT+GGG | - | chr4_4:45391444-45391463 | Msa0683030:intron | 30.0% | |
| ! | TCCCAATTCTAGGTAATTTT+TGG | + | chr4_4:45391448-45391467 | None:intergenic | 30.0% |
| AAAAATTACCTAGAATTGGG+AGG | - | chr4_4:45391447-45391466 | Msa0683030:intron | 30.0% | |
| AAAATTACCTAGAATTGGGA+GGG | - | chr4_4:45391448-45391467 | Msa0683030:intron | 30.0% | |
| TAAAACGTAGAATCGTAACA+AGG | - | chr4_4:45391484-45391503 | Msa0683030:intron | 30.0% | |
| !!! | CAATTTTGAGATTAAGGTAC+CGG | - | chr4_4:45391563-45391582 | Msa0683030:intron | 30.0% |
| !! | ATTGCAATTTTGATAACACC+GGG | - | chr4_4:45391671-45391690 | Msa0683030:intron | 30.0% |
| AAAATCAAAGGCTTCCAAAA+AGG | + | chr4_4:45391714-45391733 | None:intergenic | 30.0% | |
| TTGTGTTACATCATGCAAAT+TGG | + | chr4_4:45392183-45392202 | None:intergenic | 30.0% | |
| !!! | TTACAACGTTGTTTTTGTCA+TGG | - | chr4_4:45392237-45392256 | Msa0683030:intron | 30.0% |
| TTGGCTCATTATAATTCTAG+TGG | - | chr4_4:45392340-45392359 | Msa0683030:intron | 30.0% | |
| TGGCTCATTATAATTCTAGT+GGG | - | chr4_4:45392341-45392360 | Msa0683030:intron | 30.0% | |
| AAATAGTAGAGTTGTTGCAT+TGG | + | chr4_4:45392378-45392397 | None:intergenic | 30.0% | |
| ATACAATGTTTAGGTGGAAA+CGG | - | chr4_4:45392517-45392536 | Msa0683030:intron | 30.0% | |
| GAGATCAGAAGAATGATTAT+TGG | - | chr4_4:45392613-45392632 | Msa0683030:CDS | 30.0% | |
| AAGCACATACAGATCTAATA+TGG | + | chr4_4:45392767-45392786 | None:intergenic | 30.0% | |
| GATGGAAAAAAAAAAGGTTC+AGG | - | chr4_4:45392836-45392855 | Msa0683030:five_prime_UTR | 30.0% | |
| ! | AGGTCTGAGATTCAATAATT+TGG | - | chr4_4:45392856-45392875 | Msa0683030:five_prime_UTR | 30.0% |
| AACATAAATAACTGTACTGG+AGG | + | chr4_4:45392905-45392924 | None:intergenic | 30.0% | |
| TAGCTGAATCAGATAGTAGT+AGG | + | chr4_4:45385964-45385983 | None:intergenic | 35.0% | |
| !! | TTGATTACTTAGCTTGGTGT+TGG | + | chr4_4:45386173-45386192 | None:intergenic | 35.0% |
| GTTCTAATCATCTTTGGCAA+CGG | + | chr4_4:45386206-45386225 | None:intergenic | 35.0% | |
| TGAGTTAAGTCTTACGAACT+GGG | + | chr4_4:45386608-45386627 | None:intergenic | 35.0% | |
| TTGAGTTAAGTCTTACGAAC+TGG | + | chr4_4:45386609-45386628 | None:intergenic | 35.0% | |
| TTCGTAAGACTTAACTCAAC+TGG | - | chr4_4:45386610-45386629 | Msa0683030:intron | 35.0% | |
| AGACTTAACTCAACTGGTTA+AGG | - | chr4_4:45386616-45386635 | Msa0683030:intron | 35.0% | |
| ATCGAGATCCACTACATTTA+AGG | + | chr4_4:45386816-45386835 | None:intergenic | 35.0% | |
| CCCTTTAACTCCTTAATAGA+TGG | + | chr4_4:45387252-45387271 | None:intergenic | 35.0% | |
| ! | TAGTATTTTTCTCCCTTGTC+TGG | + | chr4_4:45387288-45387307 | None:intergenic | 35.0% |
| CTGTTATAATGAATGATCCG+GGG | - | chr4_4:45387355-45387374 | Msa0683030:intron | 35.0% | |
| AAAGTTGTGAGAGACCAAAT+TGG | - | chr4_4:45387458-45387477 | Msa0683030:intron | 35.0% | |
| AAGTTGTGAGAGACCAAATT+GGG | - | chr4_4:45387459-45387478 | Msa0683030:intron | 35.0% | |
| CATAGTGTAACTGAATATGC+TGG | - | chr4_4:45387529-45387548 | Msa0683030:intron | 35.0% | |
| TGTTAACCTGTGGAAAAGTA+TGG | - | chr4_4:45387575-45387594 | Msa0683030:intron | 35.0% | |
| ! | GTTAACCTGTGGAAAAGTAT+GGG | - | chr4_4:45387576-45387595 | Msa0683030:intron | 35.0% |
| ATGGGAGAATTTAATCTCCA+TGG | - | chr4_4:45387594-45387613 | Msa0683030:intron | 35.0% | |
| TGGGAGAATTTAATCTCCAT+GGG | - | chr4_4:45387595-45387614 | Msa0683030:intron | 35.0% | |
| CTACAATTTCATGACCAACA+TGG | + | chr4_4:45387666-45387685 | None:intergenic | 35.0% | |
| CATGTTGGTCATGAAATTGT+AGG | - | chr4_4:45387664-45387683 | Msa0683030:intron | 35.0% | |
| ATCAAGTTCATCCTTCTGTT+TGG | - | chr4_4:45387753-45387772 | Msa0683030:intron | 35.0% | |
| ACATTATGTTGGCAATGCAT+AGG | + | chr4_4:45387829-45387848 | None:intergenic | 35.0% | |
| !!! | TGCTGCCTTCTTTTTTGTTT+AGG | - | chr4_4:45388587-45388606 | Msa0683030:intron | 35.0% |
| CCTCACCTAAACAAAAAAGA+AGG | + | chr4_4:45388595-45388614 | None:intergenic | 35.0% | |
| !!! | CCTTCTTTTTTGTTTAGGTG+AGG | - | chr4_4:45388592-45388611 | Msa0683030:intron | 35.0% |
| CATTGCACATATCAGCAATA+GGG | + | chr4_4:45388730-45388749 | None:intergenic | 35.0% | |
| ACATTGCACATATCAGCAAT+AGG | + | chr4_4:45388731-45388750 | None:intergenic | 35.0% | |
| CATAACTAGTTGTAGCTTTC+AGG | - | chr4_4:45388774-45388793 | Msa0683030:intron | 35.0% | |
| AATGAGCACAAGAAATGGTT+GGG | + | chr4_4:45388947-45388966 | None:intergenic | 35.0% | |
| TAATGAGCACAAGAAATGGT+TGG | + | chr4_4:45388948-45388967 | None:intergenic | 35.0% | |
| !! | TCAACTTTGAAGCTTATCTC+TGG | - | chr4_4:45389039-45389058 | Msa0683030:intron | 35.0% |
| !! | CAACTTTGAAGCTTATCTCT+GGG | - | chr4_4:45389040-45389059 | Msa0683030:intron | 35.0% |
| !! | AACTTTGAAGCTTATCTCTG+GGG | - | chr4_4:45389041-45389060 | Msa0683030:intron | 35.0% |
| GCAGAAAAGACAAATTCACT+AGG | + | chr4_4:45389161-45389180 | None:intergenic | 35.0% | |
| AACAAGATGTGGTGTACTAA+TGG | - | chr4_4:45389251-45389270 | Msa0683030:intron | 35.0% | |
| ACAAGATGTGGTGTACTAAT+GGG | - | chr4_4:45389252-45389271 | Msa0683030:intron | 35.0% | |
| CATACTAATGTTTGAGCAGT+TGG | + | chr4_4:45389278-45389297 | None:intergenic | 35.0% | |
| AAACATGCTTAGCATGGAAA+TGG | + | chr4_4:45389332-45389351 | None:intergenic | 35.0% | |
| TGATTGTGTTGAATTGCATC+AGG | - | chr4_4:45389430-45389449 | Msa0683030:CDS | 35.0% | |
| ACTGCATTTATCATCGAGAA+GGG | - | chr4_4:45389497-45389516 | Msa0683030:intron | 35.0% | |
| ! | GACAAACATCATTGATTGTC+AGG | + | chr4_4:45389738-45389757 | None:intergenic | 35.0% |
| CCCTAGTTTATCCAATTTCT+GGG | + | chr4_4:45389777-45389796 | None:intergenic | 35.0% | |
| CCCAGAAATTGGATAAACTA+GGG | - | chr4_4:45389774-45389793 | Msa0683030:intron | 35.0% | |
| TCCCTAGTTTATCCAATTTC+TGG | + | chr4_4:45389778-45389797 | None:intergenic | 35.0% | |
| TGTCAGTAAAATCAAGTGGT+TGG | + | chr4_4:45389862-45389881 | None:intergenic | 35.0% | |
| GAAAATGTTCTTGGGAAAGA+AGG | - | chr4_4:45389939-45389958 | Msa0683030:intron | 35.0% | |
| ! | ACTCTTTTCCTCCCAAATTA+AGG | - | chr4_4:45390192-45390211 | Msa0683030:intron | 35.0% |
| ! | CTCTTTTCCTCCCAAATTAA+GGG | - | chr4_4:45390193-45390212 | Msa0683030:intron | 35.0% |
| GGAAAATTATGCAACTGGAA+AGG | + | chr4_4:45390471-45390490 | None:intergenic | 35.0% | |
| !! | AAAACCACTTTTGCTTTGTC+AGG | - | chr4_4:45390556-45390575 | Msa0683030:intron | 35.0% |
| ACATGACTGCATAATACCAA+GGG | + | chr4_4:45390683-45390702 | None:intergenic | 35.0% | |
| ATAAACTGAAACTCCCCAAT+AGG | + | chr4_4:45390754-45390773 | None:intergenic | 35.0% | |
| !! | TCCTGCTAAATTAGTTTGCA+CGG | - | chr4_4:45390951-45390970 | Msa0683030:intron | 35.0% |
| CTTATGTGTATTCTGTAGCT+CGG | - | chr4_4:45391001-45391020 | Msa0683030:intron | 35.0% | |
| TTATGTGTATTCTGTAGCTC+GGG | - | chr4_4:45391002-45391021 | Msa0683030:intron | 35.0% | |
| ATGATAGCATTAGAGAGAGT+TGG | - | chr4_4:45391215-45391234 | Msa0683030:intron | 35.0% | |
| !! | AGTTGGTAGTAGCACAAATT+AGG | - | chr4_4:45391232-45391251 | Msa0683030:intron | 35.0% |
| !! | GTTGGTAGTAGCACAAATTA+GGG | - | chr4_4:45391233-45391252 | Msa0683030:intron | 35.0% |
| CTGATCTACTCTTCTTAGTA+TGG | + | chr4_4:45391289-45391308 | None:intergenic | 35.0% | |
| ACTAAGAAGAGTAGATCAGA+TGG | - | chr4_4:45391290-45391309 | Msa0683030:intron | 35.0% | |
| AAATTACCTAGAATTGGGAG+GGG | - | chr4_4:45391449-45391468 | Msa0683030:intron | 35.0% | |
| TAAAAGACCGCAATTGAAAC+CGG | + | chr4_4:45391585-45391604 | None:intergenic | 35.0% | |
| ! | CGTAAAATCGTGCGATTTTA+CGG | - | chr4_4:45391643-45391662 | Msa0683030:intron | 35.0% |
| !! | TTGCAATTTTGATAACACCG+GGG | - | chr4_4:45391672-45391691 | Msa0683030:intron | 35.0% |
| GCTTTCTTAATAATTCTCCC+CGG | + | chr4_4:45391692-45391711 | None:intergenic | 35.0% | |
| AGTCATCCACTCTTGTAATT+TGG | - | chr4_4:45391747-45391766 | Msa0683030:intron | 35.0% | |
| !! | AAACCATTGATTTCTAAGGG+GGG | + | chr4_4:45391961-45391980 | None:intergenic | 35.0% |
| !! | CAAACCATTGATTTCTAAGG+GGG | + | chr4_4:45391962-45391981 | None:intergenic | 35.0% |
| !! | CCAAACCATTGATTTCTAAG+GGG | + | chr4_4:45391963-45391982 | None:intergenic | 35.0% |
| !! | GCCAAACCATTGATTTCTAA+GGG | + | chr4_4:45391964-45391983 | None:intergenic | 35.0% |
| !! | AGCCAAACCATTGATTTCTA+AGG | + | chr4_4:45391965-45391984 | None:intergenic | 35.0% |
| CACGCAATGCATAAGAAATA+TGG | + | chr4_4:45392092-45392111 | None:intergenic | 35.0% | |
| ! | TTTTTGTGTTTTTCCCCGTT+CGG | - | chr4_4:45392136-45392155 | Msa0683030:intron | 35.0% |
| AACAAAATCAACAAGCCGAA+CGG | + | chr4_4:45392154-45392173 | None:intergenic | 35.0% | |
| !!! | CGGCTTGTTGATTTTGTTTT+TGG | - | chr4_4:45392156-45392175 | Msa0683030:intron | 35.0% |
| ATAATGAGCCAACATGATCT+TGG | + | chr4_4:45392332-45392351 | None:intergenic | 35.0% | |
| !! | TTATAATTCTAGTGGGCTAG+TGG | - | chr4_4:45392348-45392367 | Msa0683030:intron | 35.0% |
| ! | TCTCATGTGCTACTAATTTC+AGG | - | chr4_4:45392435-45392454 | Msa0683030:intron | 35.0% |
| TACTAATTTCAGGATTGTGC+TGG | - | chr4_4:45392445-45392464 | Msa0683030:intron | 35.0% | |
| TTGAAGCAAATCATTCCTCT+TGG | - | chr4_4:45392805-45392824 | Msa0683030:five_prime_UTR | 35.0% | |
| TTCCTCTTGGAAAATGATGA+TGG | - | chr4_4:45392818-45392837 | Msa0683030:five_prime_UTR | 35.0% | |
| ! | TTCCATCATCATTTTCCAAG+AGG | + | chr4_4:45392823-45392842 | None:intergenic | 35.0% |
| TACAGTACCAACAATAGGTA+AGG | + | chr4_4:45392985-45393004 | None:intergenic | 35.0% | |
| ACCTATTGTTGGTACTGTAT+TGG | - | chr4_4:45392986-45393005 | Msa0683030:five_prime_UTR | 35.0% | |
| TCCAATACAGTACCAACAAT+AGG | + | chr4_4:45392990-45393009 | None:intergenic | 35.0% | |
| CAGCGCTACTACTAATTTGA+AGG | - | chr4_4:45385912-45385931 | Msa0683030:three_prime_UTR | 40.0% | |
| !!! | GTGTTTTGGCAGTTGAGATA+AGG | + | chr4_4:45386015-45386034 | None:intergenic | 40.0% |
| ! | ATGGAATGGGTGTAGTGTTT+TGG | + | chr4_4:45386029-45386048 | None:intergenic | 40.0% |
| ATCGAAGAGGAATGAAGTAG+TGG | + | chr4_4:45386315-45386334 | None:intergenic | 40.0% | |
| GAGTTAAGTCTTACGAACTG+GGG | + | chr4_4:45386607-45386626 | None:intergenic | 40.0% | |
| TGGTTAAGGATCGTCAAAGT+TGG | - | chr4_4:45386630-45386649 | Msa0683030:intron | 40.0% | |
| ATCCTTAACCAGTTCGAACT+CGG | + | chr4_4:45386666-45386685 | None:intergenic | 40.0% | |
| AATTCAGTGACTTTCATGGC+AGG | - | chr4_4:45386712-45386731 | Msa0683030:intron | 40.0% | |
| ! | AGATCCACTACATTTAAGGC+GGG | + | chr4_4:45386812-45386831 | None:intergenic | 40.0% |
| GAGATCCACTACATTTAAGG+CGG | + | chr4_4:45386813-45386832 | None:intergenic | 40.0% | |
| AAACTGTCGGGGAACAAATT+GGG | + | chr4_4:45387148-45387167 | None:intergenic | 40.0% | |
| AAAACTGTCGGGGAACAAAT+TGG | + | chr4_4:45387149-45387168 | None:intergenic | 40.0% | |
| ATTAAGGAGTTAAAGGGCCA+AGG | - | chr4_4:45387255-45387274 | Msa0683030:intron | 40.0% | |
| CAAGGTTCAAATCCAGACAA+GGG | - | chr4_4:45387273-45387292 | Msa0683030:intron | 40.0% | |
| ATGAAGGACAAATTAGTCCC+CGG | + | chr4_4:45387375-45387394 | None:intergenic | 40.0% | |
| ! | ATTCTCCCATACTTTTCCAC+AGG | + | chr4_4:45387584-45387603 | None:intergenic | 40.0% |
| TACAGAAAATACGGGAGACT+TGG | + | chr4_4:45387700-45387719 | None:intergenic | 40.0% | |
| CTATGTCTGCTTATTTGCAG+AGG | - | chr4_4:45388376-45388395 | Msa0683030:intron | 40.0% | |
| TGCTTATTTGCAGAGGAGTA+TGG | - | chr4_4:45388383-45388402 | Msa0683030:intron | 40.0% | |
| ! | TTATTTGCAGAGGAGTATGG+AGG | - | chr4_4:45388386-45388405 | Msa0683030:intron | 40.0% |
| ! | TATTTGCAGAGGAGTATGGA+GGG | - | chr4_4:45388387-45388406 | Msa0683030:intron | 40.0% |
| !! | GGATCTGTTGGTCTTTCTTA+TGG | - | chr4_4:45388467-45388486 | Msa0683030:intron | 40.0% |
| !! | AAACTAGAGTGTCGAACCTT+TGG | + | chr4_4:45388651-45388670 | None:intergenic | 40.0% |
| AACTAGTTGTAGCTTTCAGG+TGG | - | chr4_4:45388777-45388796 | Msa0683030:intron | 40.0% | |
| !! | AGCTCAATTGGTTTGAGCTA+AGG | - | chr4_4:45388806-45388825 | Msa0683030:intron | 40.0% |
| !! | GCTCAATTGGTTTGAGCTAA+GGG | - | chr4_4:45388807-45388826 | Msa0683030:intron | 40.0% |
| TGGTTTGAGCTAAGGGTTAA+AGG | - | chr4_4:45388814-45388833 | Msa0683030:intron | 40.0% | |
| CTAAGGGTTAAAGGAGTTGA+AGG | - | chr4_4:45388823-45388842 | Msa0683030:intron | 40.0% | |
| AAGGACTAGATTTCAAACCC+TGG | - | chr4_4:45388851-45388870 | Msa0683030:intron | 40.0% | |
| TAGATTTCAAACCCTGGTGA+AGG | - | chr4_4:45388857-45388876 | Msa0683030:intron | 40.0% | |
| ! | CAGTATTTTCTCCTTCACCA+GGG | + | chr4_4:45388871-45388890 | None:intergenic | 40.0% |
| ! | TCAGTATTTTCTCCTTCACC+AGG | + | chr4_4:45388872-45388891 | None:intergenic | 40.0% |
| AATTCACTAGGCTAAGTCCT+TGG | + | chr4_4:45389149-45389168 | None:intergenic | 40.0% | |
| ! | GAATTTGTCTTTTCTGCAGC+CGG | - | chr4_4:45389164-45389183 | Msa0683030:CDS | 40.0% |
| GATGGGGGATATGTACTTAA+CGG | - | chr4_4:45389227-45389246 | Msa0683030:intron | 40.0% | |
| ATGGGGGATATGTACTTAAC+GGG | - | chr4_4:45389228-45389247 | Msa0683030:intron | 40.0% | |
| TACTTAACGGGAACAAGATG+TGG | - | chr4_4:45389240-45389259 | Msa0683030:intron | 40.0% | |
| CACTGCATTTATCATCGAGA+AGG | - | chr4_4:45389496-45389515 | Msa0683030:intron | 40.0% | |
| AAGGTTCAGTACAATTACCC+AGG | + | chr4_4:45389527-45389546 | None:intergenic | 40.0% | |
| ATTCAGTACTGCCCAGAAAT+TGG | - | chr4_4:45389763-45389782 | Msa0683030:intron | 40.0% | |
| GCCCAGAAATTGGATAAACT+AGG | - | chr4_4:45389773-45389792 | Msa0683030:intron | 40.0% | |
| ! | CTTCGAGAATTGCTTTGTTC+CGG | - | chr4_4:45389914-45389933 | Msa0683030:intron | 40.0% |
| TTCCGGAGGAAAATGTTCTT+GGG | - | chr4_4:45389931-45389950 | Msa0683030:intron | 40.0% | |
| ! | TTCCCAAGAACATTTTCCTC+CGG | + | chr4_4:45389936-45389955 | None:intergenic | 40.0% |
| AAGCTGATATGATGCAAGAG+AGG | + | chr4_4:45390290-45390309 | None:intergenic | 40.0% | |
| CATGACTGCATAATACCAAG+GGG | + | chr4_4:45390682-45390701 | None:intergenic | 40.0% | |
| GACATGACTGCATAATACCA+AGG | + | chr4_4:45390684-45390703 | None:intergenic | 40.0% | |
| CTCTTTGTCGAACATAAGGA+AGG | + | chr4_4:45390717-45390736 | None:intergenic | 40.0% | |
| TGCTCTCTTTGTCGAACATA+AGG | + | chr4_4:45390721-45390740 | None:intergenic | 40.0% | |
| TGGGGAGTTTCAGTTTATAC+AGG | - | chr4_4:45390756-45390775 | Msa0683030:intron | 40.0% | |
| GGTATGAGATTCTAATGCCA+TGG | - | chr4_4:45390918-45390937 | Msa0683030:intron | 40.0% | |
| GTAGCACAAATTAGGGAGTT+TGG | - | chr4_4:45391240-45391259 | Msa0683030:intron | 40.0% | |
| AAGAAGAGTAGATCAGATGG+AGG | - | chr4_4:45391293-45391312 | Msa0683030:intron | 40.0% | |
| AGAAGAGTAGATCAGATGGA+GGG | - | chr4_4:45391294-45391313 | Msa0683030:intron | 40.0% | |
| TCAAGATCAGGATCTTGCTT+AGG | - | chr4_4:45391375-45391394 | Msa0683030:intron | 40.0% | |
| ATCAGGATCTTGCTTAGGAT+TGG | - | chr4_4:45391380-45391399 | Msa0683030:intron | 40.0% | |
| AATTACCTAGAATTGGGAGG+GGG | - | chr4_4:45391450-45391469 | Msa0683030:intron | 40.0% | |
| !! | TAAGGTACCGGTTTCAATTG+CGG | - | chr4_4:45391575-45391594 | Msa0683030:intron | 40.0% |
| AAACGATCTTACTCGTTCCA+TGG | - | chr4_4:45391611-45391630 | Msa0683030:intron | 40.0% | |
| AACGATCTTACTCGTTCCAT+GGG | - | chr4_4:45391612-45391631 | Msa0683030:intron | 40.0% | |
| CCCCTTAGAAATCAATGGTT+TGG | - | chr4_4:45391960-45391979 | Msa0683030:intron | 40.0% | |
| ACAAAATCAACAAGCCGAAC+GGG | + | chr4_4:45392153-45392172 | None:intergenic | 40.0% | |
| AACTTGAGCCAAGATCATGT+TGG | - | chr4_4:45392321-45392340 | Msa0683030:intron | 40.0% | |
| TTGCAGGCGATACAATGTTT+AGG | - | chr4_4:45392508-45392527 | Msa0683030:intron | 40.0% | |
| TATGTGAACGAGTATCCAAC+CGG | - | chr4_4:45392541-45392560 | Msa0683030:intron | 40.0% | |
| TCTTCTGATCTCACTTGTTC+CGG | + | chr4_4:45392605-45392624 | None:intergenic | 40.0% | |
| TATTGGACGTGATCTCTTCA+AGG | - | chr4_4:45392630-45392649 | Msa0683030:CDS | 40.0% | |
| AGTTCCAGTCAAAATCCAAG+GGG | + | chr4_4:45392673-45392692 | None:intergenic | 40.0% | |
| CAGTTCCAGTCAAAATCCAA+GGG | + | chr4_4:45392674-45392693 | None:intergenic | 40.0% | |
| TCAGTTCCAGTCAAAATCCA+AGG | + | chr4_4:45392675-45392694 | None:intergenic | 40.0% | |
| TTACAAAGGAATCATCTCCG+AGG | + | chr4_4:45392701-45392720 | None:intergenic | 40.0% | |
| GGCAGTTGAGATAAGGATGA+AGG | + | chr4_4:45386008-45386027 | None:intergenic | 45.0% | |
| GTATCTGAGTGTCATCGAAG+AGG | + | chr4_4:45386328-45386347 | None:intergenic | 45.0% | |
| CTTCGATGACACTCAGATAC+AGG | - | chr4_4:45386328-45386347 | Msa0683030:CDS | 45.0% | |
| TAAGTCTTACGAACTGGGGT+GGG | + | chr4_4:45386603-45386622 | None:intergenic | 45.0% | |
| TTAAGTCTTACGAACTGGGG+TGG | + | chr4_4:45386604-45386623 | None:intergenic | 45.0% | |
| ATCCGAGTTCGAACTGGTTA+AGG | - | chr4_4:45386661-45386680 | Msa0683030:intron | 45.0% | |
| CTTTCCCGCCTTAAATGTAG+TGG | - | chr4_4:45386805-45386824 | Msa0683030:intron | 45.0% | |
| GTGGATCTCGATCTCAGTTT+CGG | - | chr4_4:45386824-45386843 | Msa0683030:intron | 45.0% | |
| ATCTCGATCTCAGTTTCGGA+TGG | - | chr4_4:45386828-45386847 | Msa0683030:intron | 45.0% | |
| ! | ATCAATGTGGGAAGCATGAG+GGG | + | chr4_4:45387058-45387077 | None:intergenic | 45.0% |
| ! | GATCAATGTGGGAAGCATGA+GGG | + | chr4_4:45387059-45387078 | None:intergenic | 45.0% |
| ! | TGATCAATGTGGGAAGCATG+AGG | + | chr4_4:45387060-45387079 | None:intergenic | 45.0% |
| TTGAGCAGCGAGAAAACTGT+CGG | + | chr4_4:45387161-45387180 | None:intergenic | 45.0% | |
| CCTTGTCTGGATTTGAACCT+TGG | + | chr4_4:45387275-45387294 | None:intergenic | 45.0% | |
| CCAAGGTTCAAATCCAGACA+AGG | - | chr4_4:45387272-45387291 | Msa0683030:intron | 45.0% | |
| CACATATCAGCAATAGGGCA+AGG | + | chr4_4:45388725-45388744 | None:intergenic | 45.0% | |
| ! | AGTTGTAGCTTTCAGGTGGT+TGG | - | chr4_4:45388781-45388800 | Msa0683030:intron | 45.0% |
| ! | GTTGTAGCTTTCAGGTGGTT+GGG | - | chr4_4:45388782-45388801 | Msa0683030:intron | 45.0% |
| ! | CTTATCTCTGGGGATCATGT+GGG | - | chr4_4:45389051-45389070 | Msa0683030:intron | 45.0% |
| CATGCTGACAACATCAGATC+CGG | + | chr4_4:45389186-45389205 | None:intergenic | 45.0% | |
| TGCAAAGCTGATCGTGTAGA+TGG | - | chr4_4:45389209-45389228 | Msa0683030:intron | 45.0% | |
| GCAAAGCTGATCGTGTAGAT+GGG | - | chr4_4:45389210-45389229 | Msa0683030:intron | 45.0% | |
| CAAAGCTGATCGTGTAGATG+GGG | - | chr4_4:45389211-45389230 | Msa0683030:intron | 45.0% | |
| AAAGCTGATCGTGTAGATGG+GGG | - | chr4_4:45389212-45389231 | Msa0683030:intron | 45.0% | |
| TGCTTAGCATGGAAATGGCA+TGG | + | chr4_4:45389327-45389346 | None:intergenic | 45.0% | |
| TGGGACAAACATGCTTAGCA+TGG | + | chr4_4:45389338-45389357 | None:intergenic | 45.0% | |
| CAAAAACAGACGCAACAGCA+GGG | - | chr4_4:45389462-45389481 | Msa0683030:CDS | 45.0% | |
| TTGGATAAACTAGGGATGCG+AGG | - | chr4_4:45389782-45389801 | Msa0683030:intron | 45.0% | |
| GTTCCGGAGGAAAATGTTCT+TGG | - | chr4_4:45389930-45389949 | Msa0683030:intron | 45.0% | |
| GTTCTTGGGAAAGAAGGGAA+AGG | - | chr4_4:45389945-45389964 | Msa0683030:intron | 45.0% | |
| AGCCACTCACTAAGAACGTA+AGG | - | chr4_4:45390368-45390387 | Msa0683030:intron | 45.0% | |
| GTCCTTACGTTCTTAGTGAG+TGG | + | chr4_4:45390373-45390392 | None:intergenic | 45.0% | |
| GACACCTGACAAAGCAAAAG+TGG | + | chr4_4:45390563-45390582 | None:intergenic | 45.0% | |
| GGAGTCTATGTCATGATGTC+TGG | - | chr4_4:45390622-45390641 | Msa0683030:intron | 45.0% | |
| CTATGTCATGATGTCTGGAC+TGG | - | chr4_4:45390627-45390646 | Msa0683030:intron | 45.0% | |
| ! | CATGATGTCTGGACTGGATT+TGG | - | chr4_4:45390633-45390652 | Msa0683030:intron | 45.0% |
| ! | TGTCTGGACTGGATTTGGAA+AGG | - | chr4_4:45390638-45390657 | Msa0683030:intron | 45.0% |
| !!! | GAAAGGCTTGTTTTAGCAGC+CGG | - | chr4_4:45390655-45390674 | Msa0683030:intron | 45.0% |
| GTTCGACAAAGAGAGCAGTT+CGG | - | chr4_4:45390724-45390743 | Msa0683030:intron | 45.0% | |
| ATCGCGCCCTTTGTATTGTA+TGG | - | chr4_4:45390816-45390835 | Msa0683030:intron | 45.0% | |
| AGCAGGAGAAAATAGCACCA+TGG | + | chr4_4:45390938-45390957 | None:intergenic | 45.0% | |
| GCCGTGCAAACTAATTTAGC+AGG | + | chr4_4:45390955-45390974 | None:intergenic | 45.0% | |
| CAACGGAAAAGTTGACCCAA+AGG | - | chr4_4:45391032-45391051 | Msa0683030:intron | 45.0% | |
| !! | AGATTTGAGGAGGCACCTTT+GGG | + | chr4_4:45391050-45391069 | None:intergenic | 45.0% |
| !! | TGGAGGGTATCCTAATCACT+AGG | - | chr4_4:45391310-45391329 | Msa0683030:intron | 45.0% |
| !! | GGAGGGTATCCTAATCACTA+GGG | - | chr4_4:45391311-45391330 | Msa0683030:intron | 45.0% |
| !! | GAGGGTATCCTAATCACTAG+GGG | - | chr4_4:45391312-45391331 | Msa0683030:intron | 45.0% |
| TTCATCAGCCCCTAGTGATT+AGG | + | chr4_4:45391323-45391342 | None:intergenic | 45.0% | |
| ! | TCTTGCTTAGGATTGGCAAG+AGG | - | chr4_4:45391387-45391406 | Msa0683030:intron | 45.0% |
| ! | CTTGCTTAGGATTGGCAAGA+GGG | - | chr4_4:45391388-45391407 | Msa0683030:intron | 45.0% |
| ! | GATTTCTAAGGGGGGTGTAT+CGG | + | chr4_4:45391953-45391972 | None:intergenic | 45.0% |
| ACACCCCCCTTAGAAATCAA+TGG | - | chr4_4:45391955-45391974 | Msa0683030:intron | 45.0% | |
| ACTAGGTGGAGTCAGATACA+TGG | + | chr4_4:45392029-45392048 | None:intergenic | 45.0% | |
| ATGTATCTGACTCCACCTAG+TGG | - | chr4_4:45392028-45392047 | Msa0683030:intron | 45.0% | |
| TGTATCTGACTCCACCTAGT+GGG | - | chr4_4:45392029-45392048 | Msa0683030:intron | 45.0% | |
| CAACCAAGATTTGTCCCACT+AGG | + | chr4_4:45392046-45392065 | None:intergenic | 45.0% | |
| GGGACAAATCTTGGTTGTTG+TGG | - | chr4_4:45392049-45392068 | Msa0683030:intron | 45.0% | |
| CAAAATCAACAAGCCGAACG+GGG | + | chr4_4:45392152-45392171 | None:intergenic | 45.0% | |
| AACACAAGTACAGTGTGCAG+TGG | - | chr4_4:45392196-45392215 | Msa0683030:intron | 45.0% | |
| ! | AGCAACACAAGTTGCTTTGC+AGG | - | chr4_4:45392492-45392511 | Msa0683030:intron | 45.0% |
| CAGGCGATACAATGTTTAGG+TGG | - | chr4_4:45392511-45392530 | Msa0683030:intron | 45.0% | |
| !! | TAGTCCCCTTGGATTTTGAC+TGG | - | chr4_4:45392666-45392685 | Msa0683030:CDS | 45.0% |
| TGCAGTGCCTTACCTATTGT+TGG | - | chr4_4:45392975-45392994 | Msa0683030:five_prime_UTR | 45.0% | |
| AAGTCTTACGAACTGGGGTG+GGG | + | chr4_4:45386602-45386621 | None:intergenic | 50.0% | |
| ACCTTCATCCGAGTTCGAAC+TGG | - | chr4_4:45386655-45386674 | Msa0683030:intron | 50.0% | |
| ACCAGTTCGAACTCGGATGA+AGG | + | chr4_4:45386659-45386678 | None:intergenic | 50.0% | |
| TGAGCAGCGAGAAAACTGTC+GGG | + | chr4_4:45387160-45387179 | None:intergenic | 50.0% | |
| GGTCTCTCACAACTTTCTCG+CGG | + | chr4_4:45387454-45387473 | None:intergenic | 50.0% | |
| TACCTGGTGCAGTAATCCCA+TGG | + | chr4_4:45387614-45387633 | None:intergenic | 50.0% | |
| CCAACATGGATGCTCACTCA+AGG | + | chr4_4:45387652-45387671 | None:intergenic | 50.0% | |
| CCTTGAGTGAGCATCCATGT+TGG | - | chr4_4:45387649-45387668 | Msa0683030:intron | 50.0% | |
| ! | GAAGAGATTAGCCGAGCTTC+AGG | - | chr4_4:45388446-45388465 | Msa0683030:intron | 50.0% |
| GACCAACAGATCCTGAAGCT+CGG | + | chr4_4:45388460-45388479 | None:intergenic | 50.0% | |
| AGGTGGTTGGGTAGCTCAAT+TGG | - | chr4_4:45388794-45388813 | Msa0683030:intron | 50.0% | |
| ! | GCTTATCTCTGGGGATCATG+TGG | - | chr4_4:45389050-45389069 | Msa0683030:intron | 50.0% |
| GCAAAAACAGACGCAACAGC+AGG | - | chr4_4:45389461-45389480 | Msa0683030:CDS | 50.0% | |
| ATCATCGAGAAGGGAATGCC+TGG | - | chr4_4:45389506-45389525 | Msa0683030:intron | 50.0% | |
| TCATCGAGAAGGGAATGCCT+GGG | - | chr4_4:45389507-45389526 | Msa0683030:intron | 50.0% | |
| ! | CGAGAATTGCTTTGTTCCGG+AGG | - | chr4_4:45389917-45389936 | Msa0683030:intron | 50.0% |
| GTTCTTAGTGAGTGGCTGAG+TGG | + | chr4_4:45390365-45390384 | None:intergenic | 50.0% | |
| CTGCATAATACCAAGGGGAC+CGG | + | chr4_4:45390677-45390696 | None:intergenic | 50.0% | |
| AGCAGTTCGGTCGTCCTATT+GGG | - | chr4_4:45390737-45390756 | Msa0683030:intron | 50.0% | |
| !! | CAGATTTGAGGAGGCACCTT+TGG | + | chr4_4:45391051-45391070 | None:intergenic | 50.0% |
| TCTTACTCGTTCCATGGGAG+TGG | - | chr4_4:45391617-45391636 | Msa0683030:intron | 50.0% | |
| CTTACTCGTTCCATGGGAGT+GGG | - | chr4_4:45391618-45391637 | Msa0683030:intron | 50.0% | |
| TTACTCGTTCCATGGGAGTG+GGG | - | chr4_4:45391619-45391638 | Msa0683030:intron | 50.0% | |
| ! | ATTTTACGACCCCACTCCCA+TGG | + | chr4_4:45391631-45391650 | None:intergenic | 50.0% |
| ! | TAAGGGGGGTGTATCGGATT+GGG | + | chr4_4:45391947-45391966 | None:intergenic | 50.0% |
| CCAAGATTTGTCCCACTAGG+TGG | + | chr4_4:45392043-45392062 | None:intergenic | 50.0% | |
| CCACCTAGTGGGACAAATCT+TGG | - | chr4_4:45392040-45392059 | Msa0683030:intron | 50.0% | |
| GATGCGAAGCTCTACGAGAT+CGG | - | chr4_4:45392577-45392596 | Msa0683030:intron | 50.0% | |
| ATGCGAAGCTCTACGAGATC+GGG | - | chr4_4:45392578-45392597 | Msa0683030:intron | 50.0% | |
| CAATGACATGCTAGTCCCCT+TGG | - | chr4_4:45392655-45392674 | Msa0683030:CDS | 50.0% | |
| GAGCAGCGAGAAAACTGTCG+GGG | + | chr4_4:45387159-45387178 | None:intergenic | 55.0% | |
| CTCCATGGGATTACTGCACC+AGG | - | chr4_4:45387609-45387628 | Msa0683030:intron | 55.0% | |
| ! | GAGTATGGAGGGCTTGGTCT+AGG | - | chr4_4:45388398-45388417 | Msa0683030:intron | 55.0% |
| AGCCGAGCTTCAGGATCTGT+TGG | - | chr4_4:45388455-45388474 | Msa0683030:intron | 55.0% | |
| TGGGGATCATGTGGGAGCTT+TGG | - | chr4_4:45389059-45389078 | Msa0683030:intron | 55.0% | |
| GACGCAACAGCAGGGTCAAA+AGG | - | chr4_4:45389470-45389489 | Msa0683030:CDS | 55.0% | |
| GAGCAGTTCGGTCGTCCTAT+TGG | - | chr4_4:45390736-45390755 | Msa0683030:intron | 55.0% | |
| GCAGTTCGGTCGTCCTATTG+GGG | - | chr4_4:45390738-45390757 | Msa0683030:intron | 55.0% | |
| GTAGCTCGGGACTGTGACAA+CGG | - | chr4_4:45391015-45391034 | Msa0683030:intron | 55.0% | |
| TGCAACCCCCTCCCAATTCT+AGG | + | chr4_4:45391458-45391477 | None:intergenic | 55.0% | |
| ! | CTAAGGGGGGTGTATCGGAT+TGG | + | chr4_4:45391948-45391967 | None:intergenic | 55.0% |
| CGTAGAGCTTCGCATCTCTG+AGG | + | chr4_4:45392573-45392592 | None:intergenic | 55.0% | |
| TGCGAAGCTCTACGAGATCG+GGG | - | chr4_4:45392579-45392598 | Msa0683030:intron | 55.0% | |
| TTGACTGGAACTGAGCGCCT+CGG | - | chr4_4:45392681-45392700 | Msa0683030:CDS | 55.0% | |
| ! | GCAGAGGAGTATGGAGGGCT+TGG | - | chr4_4:45388392-45388411 | Msa0683030:intron | 60.0% |
| !! | GTTTTAGCAGCCGGTCCCCT+TGG | - | chr4_4:45390664-45390683 | Msa0683030:intron | 60.0% |
| ! | TCTCTGAGGAGACGACCGGT+TGG | + | chr4_4:45392559-45392578 | None:intergenic | 60.0% |
| ! | CGCATCTCTGAGGAGACGAC+CGG | + | chr4_4:45392563-45392582 | None:intergenic | 60.0% |
| AAGCTCTACGAGATCGGGGC+CGG | - | chr4_4:45392583-45392602 | Msa0683030:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 45385897 | 45393058 | 45385897 | ID=Msa0683030;Name=Msa0683030 |
| chr4_4 | mRNA | 45385897 | 45393058 | 45385897 | ID=Msa0683030-mRNA-1;Parent=Msa0683030;Name=Msa0683030-mRNA-1;_AED=0.10;_eAED=0.10;_QI=318|1|1|1|1|1|14|398|417 |
| chr4_4 | exon | 45385897 | 45386498 | 45385897 | ID=Msa0683030-mRNA-1:exon:11039;Parent=Msa0683030-mRNA-1 |
| chr4_4 | exon | 45387902 | 45387956 | 45387902 | ID=Msa0683030-mRNA-1:exon:11038;Parent=Msa0683030-mRNA-1 |
| chr4_4 | exon | 45388037 | 45388077 | 45388037 | ID=Msa0683030-mRNA-1:exon:11037;Parent=Msa0683030-mRNA-1 |
| chr4_4 | exon | 45388178 | 45388332 | 45388178 | ID=Msa0683030-mRNA-1:exon:11036;Parent=Msa0683030-mRNA-1 |
| chr4_4 | exon | 45388989 | 45389053 | 45388989 | ID=Msa0683030-mRNA-1:exon:11035;Parent=Msa0683030-mRNA-1 |
| chr4_4 | exon | 45389142 | 45389192 | 45389142 | ID=Msa0683030-mRNA-1:exon:11034;Parent=Msa0683030-mRNA-1 |
| chr4_4 | exon | 45389427 | 45389503 | 45389427 | ID=Msa0683030-mRNA-1:exon:11033;Parent=Msa0683030-mRNA-1 |
| chr4_4 | exon | 45389663 | 45389772 | 45389663 | ID=Msa0683030-mRNA-1:exon:11032;Parent=Msa0683030-mRNA-1 |
| chr4_4 | exon | 45389856 | 45389904 | 45389856 | ID=Msa0683030-mRNA-1:exon:11031;Parent=Msa0683030-mRNA-1 |
| chr4_4 | exon | 45390302 | 45390346 | 45390302 | ID=Msa0683030-mRNA-1:exon:11030;Parent=Msa0683030-mRNA-1 |
| chr4_4 | exon | 45390435 | 45390559 | 45390435 | ID=Msa0683030-mRNA-1:exon:11029;Parent=Msa0683030-mRNA-1 |
| chr4_4 | exon | 45391325 | 45391382 | 45391325 | ID=Msa0683030-mRNA-1:exon:11028;Parent=Msa0683030-mRNA-1 |
| chr4_4 | exon | 45391857 | 45391940 | 45391857 | ID=Msa0683030-mRNA-1:exon:11027;Parent=Msa0683030-mRNA-1 |
| chr4_4 | exon | 45392606 | 45393058 | 45392606 | ID=Msa0683030-mRNA-1:exon:11026;Parent=Msa0683030-mRNA-1 |
| chr4_4 | five_prime_UTR | 45392741 | 45393058 | 45392741 | ID=Msa0683030-mRNA-1:five_prime_utr;Parent=Msa0683030-mRNA-1 |
| chr4_4 | CDS | 45392606 | 45392740 | 45392606 | ID=Msa0683030-mRNA-1:cds;Parent=Msa0683030-mRNA-1 |
| chr4_4 | CDS | 45391857 | 45391940 | 45391857 | ID=Msa0683030-mRNA-1:cds;Parent=Msa0683030-mRNA-1 |
| chr4_4 | CDS | 45391325 | 45391382 | 45391325 | ID=Msa0683030-mRNA-1:cds;Parent=Msa0683030-mRNA-1 |
| chr4_4 | CDS | 45390435 | 45390559 | 45390435 | ID=Msa0683030-mRNA-1:cds;Parent=Msa0683030-mRNA-1 |
| chr4_4 | CDS | 45390302 | 45390346 | 45390302 | ID=Msa0683030-mRNA-1:cds;Parent=Msa0683030-mRNA-1 |
| chr4_4 | CDS | 45389856 | 45389904 | 45389856 | ID=Msa0683030-mRNA-1:cds;Parent=Msa0683030-mRNA-1 |
| chr4_4 | CDS | 45389663 | 45389772 | 45389663 | ID=Msa0683030-mRNA-1:cds;Parent=Msa0683030-mRNA-1 |
| chr4_4 | CDS | 45389427 | 45389503 | 45389427 | ID=Msa0683030-mRNA-1:cds;Parent=Msa0683030-mRNA-1 |
| chr4_4 | CDS | 45389142 | 45389192 | 45389142 | ID=Msa0683030-mRNA-1:cds;Parent=Msa0683030-mRNA-1 |
| chr4_4 | CDS | 45388989 | 45389053 | 45388989 | ID=Msa0683030-mRNA-1:cds;Parent=Msa0683030-mRNA-1 |
| chr4_4 | CDS | 45388178 | 45388332 | 45388178 | ID=Msa0683030-mRNA-1:cds;Parent=Msa0683030-mRNA-1 |
| chr4_4 | CDS | 45388037 | 45388077 | 45388037 | ID=Msa0683030-mRNA-1:cds;Parent=Msa0683030-mRNA-1 |
| chr4_4 | CDS | 45387902 | 45387956 | 45387902 | ID=Msa0683030-mRNA-1:cds;Parent=Msa0683030-mRNA-1 |
| chr4_4 | CDS | 45386295 | 45386498 | 45386295 | ID=Msa0683030-mRNA-1:cds;Parent=Msa0683030-mRNA-1 |
| chr4_4 | three_prime_UTR | 45385897 | 45386294 | 45385897 | ID=Msa0683030-mRNA-1:three_prime_utr;Parent=Msa0683030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
