Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0602180 | XP_003606450.1 | 99.041 | 417 | 4 | 0 | 1 | 417 | 1 | 417 | 0.0 | 866 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0602180 | sp|Q75IM9|IVD_ORYSJ | 88.571 | 385 | 44 | 0 | 33 | 417 | 25 | 409 | 0.0 | 724 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0374790 | Msa0602180 | 0.843252 | 1.570552e-58 | -8.615850e-47 |
| Msa0424000 | Msa0602180 | 0.828051 | 1.114257e-54 | -8.615850e-47 |
| Msa0470920 | Msa0602180 | 0.803567 | 3.277916e-49 | -8.615850e-47 |
| Msa0476070 | Msa0602180 | 0.823948 | 1.052050e-53 | -8.615850e-47 |
| Msa0481100 | Msa0602180 | 0.857353 | 1.729887e-62 | -8.615850e-47 |
| Msa0547440 | Msa0602180 | 0.892522 | 1.469393e-74 | -8.615850e-47 |
| Msa0578570 | Msa0602180 | 0.839385 | 1.635327e-57 | -8.615850e-47 |
| Msa0602180 | Msa0643520 | 0.950818 | 7.485504e-109 | -8.615850e-47 |
| Msa0602180 | Msa0649820 | 0.833226 | 6.021272e-56 | -8.615850e-47 |
| Msa0602180 | Msa0650060 | 0.807917 | 3.999119e-50 | -8.615850e-47 |
| Msa0602180 | Msa0683000 | 0.949294 | 1.701417e-107 | -8.615850e-47 |
| Msa0602180 | Msa0683030 | 0.939542 | 1.066537e-99 | -8.615850e-47 |
| Msa0602180 | Msa0982380 | 0.831764 | 1.387049e-55 | -8.615850e-47 |
| Msa0602180 | Msa1152430 | 0.804120 | 2.515462e-49 | -8.615850e-47 |
| Msa0602180 | Msa1217950 | 0.861812 | 7.883573e-64 | -8.615850e-47 |
| Msa0602180 | Msa1219790 | 0.804892 | 1.736316e-49 | -8.615850e-47 |
| Msa0602180 | Msa1370080 | 0.803367 | 3.605595e-49 | -8.615850e-47 |
| Msa0602180 | Msa1401550 | 0.812386 | 4.351309e-51 | -8.615850e-47 |
| Msa0602180 | Msa1462640 | 0.835201 | 1.926291e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0602180 | MtrunA17_Chr4g0029681 | 99.041 | 417 | 4 | 0 | 1 | 417 | 1 | 417 | 0.0 | 866 |
| Msa0602180 | MtrunA17_Chr7g0242641 | 29.641 | 334 | 228 | 4 | 81 | 413 | 17 | 344 | 1.45e-44 | 158 |
| Msa0602180 | MtrunA17_Chr2g0295521 | 26.736 | 288 | 199 | 6 | 134 | 411 | 519 | 804 | 2.34e-21 | 96.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0602180 | AT3G45300.1 | 89.153 | 378 | 41 | 0 | 40 | 417 | 32 | 409 | 0.0 | 699 |
| Msa0602180 | AT3G51840.1 | 26.790 | 377 | 267 | 5 | 38 | 413 | 54 | 422 | 7.26e-42 | 153 |
| Msa0602180 | AT3G06810.1 | 26.736 | 288 | 199 | 6 | 134 | 411 | 530 | 815 | 2.28e-21 | 97.4 |
| Msa0602180 | AT5G65110.1 | 24.309 | 362 | 216 | 14 | 109 | 415 | 133 | 491 | 1.35e-11 | 67.0 |
| Msa0602180 | AT5G65110.2 | 23.889 | 360 | 222 | 13 | 109 | 416 | 133 | 492 | 1.44e-11 | 66.6 |
Find 128 sgRNAs with CRISPR-Local
Find 463 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCCTAGTTTATCCAATTTC+TGG | 0.126605 | 4_2:+45607068 | None:intergenic |
| GGATCTGTTGGTCTTTCTTA+TGG | 0.218631 | 4_2:-45608372 | Msa0602180:CDS |
| ATTCTTGTTCTAATCATCTT+TGG | 0.276096 | 4_2:+45610631 | None:intergenic |
| ATTCAGTACTGCCCAGAAAT+TGG | 0.276268 | 4_2:-45607080 | Msa0602180:CDS |
| TGTTAACTTGTGGAAAAGTA+TGG | 0.285642 | 4_2:-45609265 | Msa0602180:CDS |
| GAGATCAGAAGAATGATTAT+TGG | 0.293324 | 4_2:-45604201 | Msa0602180:CDS |
| TGCTTATTTGCAGAGGAGTA+TGG | 0.296519 | 4_2:-45608456 | Msa0602180:intron |
| GGAATCTATTACATTACTTT+TGG | 0.301187 | 4_2:+45603933 | None:intergenic |
| AGCAACACAAGTTGCTTTGC+AGG | 0.308452 | 4_2:-45604322 | Msa0602180:CDS |
| AGGTCTGAGATTCAATAATT+TGG | 0.315835 | 4_2:-45603958 | Msa0602180:three_prime_UTR |
| CATGATGTCTGGACTGGATT+TGG | 0.321758 | 4_2:-45606183 | Msa0602180:CDS |
| AGCAGTTCGGTCGTCCTATT+GGG | 0.323036 | 4_2:-45606079 | Msa0602180:CDS |
| GAGCAGTTCGGTCGTCCTAT+TGG | 0.326208 | 4_2:-45606080 | Msa0602180:CDS |
| GTTCCGGAGGAAAATGTTCT+TGG | 0.329541 | 4_2:-45606913 | Msa0602180:CDS |
| TCTGAAAAGAGTTGAGAAAA+TGG | 0.338845 | 4_2:+45610594 | None:intergenic |
| TCTTCTGATCTCACTTGTTC+CGG | 0.339052 | 4_2:+45604212 | None:intergenic |
| CTTCGAGAATTGCTTTGTTC+CGG | 0.341846 | 4_2:-45606929 | Msa0602180:CDS |
| TACTAAATAGTAAACTAATA+TGG | 0.341856 | 4_2:+45610795 | None:intergenic |
| TGGGGATCATGTGGGAGCTT+TGG | 0.343115 | 4_2:-45607784 | Msa0602180:CDS |
| TGCAAAGCTGATCGTGTAGA+TGG | 0.343954 | 4_2:-45607634 | Msa0602180:CDS |
| AAGCACATACAGATCTAATA+TGG | 0.347321 | 4_2:+45604050 | None:intergenic |
| ACCTATTGTTGGTACTGTAT+TGG | 0.353949 | 4_2:-45603828 | Msa0602180:three_prime_UTR |
| AACAAGATGTGGTGTACTAA+TGG | 0.357977 | 4_2:-45607592 | Msa0602180:CDS |
| CAGCGCTACTACTAATTTGA+AGG | 0.364024 | 4_2:-45610928 | Msa0602180:five_prime_UTR |
| GAAGAGATTAGCCGAGCTTC+AGG | 0.365845 | 4_2:-45608393 | Msa0602180:CDS |
| CCCTAGTTTATCCAATTTCT+GGG | 0.377085 | 4_2:+45607069 | None:intergenic |
| TCAACTTTGAAGCTTATCTC+TGG | 0.384395 | 4_2:-45607804 | Msa0602180:intron |
| TTGCAGGCGATACAATGTTT+AGG | 0.392157 | 4_2:-45604306 | Msa0602180:CDS |
| CTTCGATGACACTCAGATAC+AGG | 0.395511 | 4_2:-45610512 | Msa0602180:intron |
| TTGAAGCAAATCATTCCTCT+TGG | 0.399533 | 4_2:-45604009 | Msa0602180:three_prime_UTR |
| TATTGTATATGATATGATAT+CGG | 0.403469 | 4_2:+45610699 | None:intergenic |
| ATGGAATGGGTGTAGTGTTT+TGG | 0.406758 | 4_2:+45610814 | None:intergenic |
| GGAGTCTATGTCATGATGTC+TGG | 0.411304 | 4_2:-45606194 | Msa0602180:CDS |
| TGGGGAGTTTCAGTTTATAC+AGG | 0.418608 | 4_2:-45606060 | Msa0602180:intron |
| ATGCGAAGCTCTACGAGATC+GGG | 0.423929 | 4_2:-45604236 | Msa0602180:CDS |
| TGCTCTCTTTGTCGAACATA+AGG | 0.427952 | 4_2:+45606098 | None:intergenic |
| TTACCAGTTGATTGATACAT+AGG | 0.435581 | 4_2:+45608337 | None:intergenic |
| ATAAACTGAAACTCCCCAAT+AGG | 0.438380 | 4_2:+45606065 | None:intergenic |
| GCAGAGGAGTATGGAGGGCT+TGG | 0.439310 | 4_2:-45608447 | Msa0602180:intron |
| TTCCGGAGGAAAATGTTCTT+GGG | 0.444098 | 4_2:-45606912 | Msa0602180:CDS |
| TGCAGTGCCTTACCTATTGT+TGG | 0.444742 | 4_2:-45603839 | Msa0602180:three_prime_UTR |
| TAACCTATGTATCAATCAAC+TGG | 0.447355 | 4_2:-45608340 | Msa0602180:intron |
| GACGCAACAGCAGGGTCAAA+AGG | 0.449570 | 4_2:-45607373 | Msa0602180:CDS |
| CATACTAATGTTTGAGCAGT+TGG | 0.450831 | 4_2:+45607568 | None:intergenic |
| CAACTTTGAAGCTTATCTCT+GGG | 0.454090 | 4_2:-45607803 | Msa0602180:intron |
| ACAAGATGTGGTGTACTAAT+GGG | 0.455535 | 4_2:-45607591 | Msa0602180:CDS |
| ATCATCGAGAAGGGAATGCC+TGG | 0.460608 | 4_2:-45607337 | Msa0602180:CDS |
| CAATGACATGCTGTTCCCCT+TGG | 0.465960 | 4_2:-45604159 | Msa0602180:exon |
| TAGCTGAATCAGATAGTAGT+AGG | 0.469758 | 4_2:+45610879 | None:intergenic |
| GGCAGTTGAGATAAGGATGA+AGG | 0.474878 | 4_2:+45610835 | None:intergenic |
| ATAGTAAACTAATATGGAAT+GGG | 0.480097 | 4_2:+45610801 | None:intergenic |
| ATACATCTTTACAGTCTTCA+CGG | 0.482149 | 4_2:-45605919 | Msa0602180:intron |
| AATAGTAAACTAATATGGAA+TGG | 0.482151 | 4_2:+45610800 | None:intergenic |
| GAGTATGGAGGGCTTGGTCT+AGG | 0.483008 | 4_2:-45608441 | Msa0602180:CDS |
| TCCAATACAGTACCAACAAT+AGG | 0.483846 | 4_2:+45603827 | None:intergenic |
| GAAAATGTTCTTGGGAAAGA+AGG | 0.485757 | 4_2:-45606904 | Msa0602180:CDS |
| ATGGGAGAATTTAATCTCCA+TGG | 0.486600 | 4_2:-45609246 | Msa0602180:CDS |
| TGATTGTTGATTACTTAGCT+TGG | 0.489097 | 4_2:+45610664 | None:intergenic |
| TTCCTCTTGGAAAATGATGA+TGG | 0.489349 | 4_2:-45603996 | Msa0602180:three_prime_UTR |
| TTGATTACTTAGCTTGGTGT+TGG | 0.494607 | 4_2:+45610670 | None:intergenic |
| TATTGGACGTGATCTCTTCA+AGG | 0.497284 | 4_2:-45604184 | Msa0602180:CDS |
| GATGCGAAGCTCTACGAGAT+CGG | 0.508301 | 4_2:-45604237 | Msa0602180:CDS |
| CTATGTCATGATGTCTGGAC+TGG | 0.510832 | 4_2:-45606189 | Msa0602180:CDS |
| CTTGTATCATTGTATAGCAA+TGG | 0.513555 | 4_2:-45608415 | Msa0602180:CDS |
| CTCCATGGGATTACTGCACC+AGG | 0.518403 | 4_2:-45609231 | Msa0602180:intron |
| GTTCTAATCATCTTTGGCAA+CGG | 0.520212 | 4_2:+45610637 | None:intergenic |
| GCAAAGCTGATCGTGTAGAT+GGG | 0.520482 | 4_2:-45607633 | Msa0602180:CDS |
| GCTTATCTCTGGGGATCATG+TGG | 0.520908 | 4_2:-45607793 | Msa0602180:CDS |
| TACTAATTTCAGGATTGTGC+TGG | 0.524388 | 4_2:-45604369 | Msa0602180:intron |
| AGCCGAGCTTCAGGATCTGT+TGG | 0.526762 | 4_2:-45608384 | Msa0602180:CDS |
| TTATGTGTATTCTGTAGCTC+GGG | 0.527867 | 4_2:-45605814 | Msa0602180:CDS |
| CTACTACTAATTTGAAGGAA+AGG | 0.528150 | 4_2:-45610923 | Msa0602180:five_prime_UTR |
| AAGCTCTACGAGATCGGGGC+CGG | 0.529045 | 4_2:-45604231 | Msa0602180:CDS |
| ATACAATGTTTAGGTGGAAA+CGG | 0.532313 | 4_2:-45604297 | Msa0602180:CDS |
| CTTATGTGTATTCTGTAGCT+CGG | 0.533799 | 4_2:-45605815 | Msa0602180:CDS |
| CACTGCATTTATCATCGAGA+AGG | 0.536640 | 4_2:-45607347 | Msa0602180:CDS |
| TACAGTACCAACAATAGGTA+AGG | 0.541934 | 4_2:+45603832 | None:intergenic |
| CGAGAATTGCTTTGTTCCGG+AGG | 0.542177 | 4_2:-45606926 | Msa0602180:CDS |
| AAAATGTTCTTGGGAAAGAA+GGG | 0.542799 | 4_2:-45606903 | Msa0602180:CDS |
| TTGACTGGAACTGAGCGCCT+CGG | 0.545543 | 4_2:-45604133 | Msa0602180:three_prime_UTR |
| GTTAACTTGTGGAAAAGTAT+GGG | 0.545610 | 4_2:-45609264 | Msa0602180:CDS |
| TAATTTAGGATGTTAACTTG+TGG | 0.547605 | 4_2:-45609275 | Msa0602180:intron |
| CCCAGAAATTGGATAAACTA+GGG | 0.547673 | 4_2:-45607069 | Msa0602180:CDS |
| ATAATTTGTGTGATCAATGT+GGG | 0.552867 | 4_2:+45609773 | None:intergenic |
| TGGGAGAATTTAATCTCCAT+GGG | 0.554351 | 4_2:-45609245 | Msa0602180:CDS |
| TCAGTTCCAGTCAAAATCCA+AGG | 0.562699 | 4_2:+45604142 | None:intergenic |
| GCCCAGAAATTGGATAAACT+AGG | 0.571430 | 4_2:-45607070 | Msa0602180:CDS |
| CTGCATAATACCAAGGGGAC+CGG | 0.575815 | 4_2:+45606142 | None:intergenic |
| AACATAAATAACTGTACTGG+AGG | 0.582553 | 4_2:+45603912 | None:intergenic |
| GTTCGACAAAGAGAGCAGTT+CGG | 0.583442 | 4_2:-45606092 | Msa0602180:CDS |
| TATGTGAACGAGTATCCAAC+CGG | 0.585904 | 4_2:-45604273 | Msa0602180:CDS |
| CAGGCGATACAATGTTTAGG+TGG | 0.587882 | 4_2:-45604303 | Msa0602180:CDS |
| AATAATTTGTGTGATCAATG+TGG | 0.589596 | 4_2:+45609772 | None:intergenic |
| TACTTAACGGGAACAAGATG+TGG | 0.589905 | 4_2:-45607603 | Msa0602180:CDS |
| GACCAACAGATCCTGAAGCT+CGG | 0.593218 | 4_2:+45608382 | None:intergenic |
| AACTTTGAAGCTTATCTCTG+GGG | 0.593388 | 4_2:-45607802 | Msa0602180:intron |
| TCACACAAATTATTTCCCAA+AGG | 0.594666 | 4_2:-45609763 | Msa0602180:intron |
| TACCTGGTGCAGTAATCCCA+TGG | 0.597662 | 4_2:+45609229 | None:intergenic |
| ATCGAAGAGGAATGAAGTAG+TGG | 0.599042 | 4_2:+45610528 | None:intergenic |
| CAAAGCTGATCGTGTAGATG+GGG | 0.599234 | 4_2:-45607632 | Msa0602180:CDS |
| CGCATCTCTGAGGAGACGAC+CGG | 0.599352 | 4_2:+45604254 | None:intergenic |
| CAGTTCCAGTCAAAATCCAA+GGG | 0.600077 | 4_2:+45604143 | None:intergenic |
| GTAGCTCGGGACTGTGACAA+CGG | 0.602533 | 4_2:-45605801 | Msa0602180:CDS |
| TTATTTGCAGAGGAGTATGG+AGG | 0.603677 | 4_2:-45608453 | Msa0602180:intron |
| CTTATCTCTGGGGATCATGT+GGG | 0.603883 | 4_2:-45607792 | Msa0602180:CDS |
| TATTTGCAGAGGAGTATGGA+GGG | 0.604314 | 4_2:-45608452 | Msa0602180:intron |
| ACTGCATTTATCATCGAGAA+GGG | 0.609190 | 4_2:-45607346 | Msa0602180:CDS |
| ATCAATGTGGGAAGCATGAG+GGG | 0.621018 | 4_2:+45609785 | None:intergenic |
| GTTCTTGGGAAAGAAGGGAA+AGG | 0.623097 | 4_2:-45606898 | Msa0602180:intron |
| TGTCTGGACTGGATTTGGAA+AGG | 0.626784 | 4_2:-45606178 | Msa0602180:CDS |
| ACATGACTGCATAATACCAA+GGG | 0.627108 | 4_2:+45606136 | None:intergenic |
| CTCTTTGTCGAACATAAGGA+AGG | 0.631959 | 4_2:+45606102 | None:intergenic |
| GTATCTGAGTGTCATCGAAG+AGG | 0.631985 | 4_2:+45610515 | None:intergenic |
| TTGGATAAACTAGGGATGCG+AGG | 0.637106 | 4_2:-45607061 | Msa0602180:CDS |
| TCTCTGAGGAGACGACCGGT+TGG | 0.638940 | 4_2:+45604258 | None:intergenic |
| TCATCGAGAAGGGAATGCCT+GGG | 0.639355 | 4_2:-45607336 | Msa0602180:intron |
| GACATGACTGCATAATACCA+AGG | 0.639799 | 4_2:+45606135 | None:intergenic |
| GATCAATGTGGGAAGCATGA+GGG | 0.653184 | 4_2:+45609784 | None:intergenic |
| GCAGTTCGGTCGTCCTATTG+GGG | 0.659632 | 4_2:-45606078 | Msa0602180:CDS |
| TATATGATATGATATCGGTA+TGG | 0.660165 | 4_2:+45610704 | None:intergenic |
| TGATCAATGTGGGAAGCATG+AGG | 0.662322 | 4_2:+45609783 | None:intergenic |
| CGTAGAGCTTCGCATCTCTG+AGG | 0.668421 | 4_2:+45604244 | None:intergenic |
| TGCGAAGCTCTACGAGATCG+GGG | 0.673463 | 4_2:-45604235 | Msa0602180:CDS |
| CAACGGAAAAGTTGACCCAA+AGG | 0.674588 | 4_2:-45605784 | Msa0602180:intron |
| AAAGCTGATCGTGTAGATGG+GGG | 0.688332 | 4_2:-45607631 | Msa0602180:CDS |
| AGTTCCAGTCAAAATCCAAG+GGG | 0.739919 | 4_2:+45604144 | None:intergenic |
| TTACAAAGGAATCATCTCCG+AGG | 0.747071 | 4_2:+45604116 | None:intergenic |
| CATGACTGCATAATACCAAG+GGG | 0.751632 | 4_2:+45606137 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTTAAACTTTTTCATT+TGG | - | chr4_2:45604294-45604313 | Msa0602180:CDS | 10.0% |
| !!! | AAATTTAAACTTTTTCATTT+GGG | - | chr4_2:45604295-45604314 | Msa0602180:CDS | 10.0% |
| !! | TTAAACAAAGAAAATTAAAA+TGG | + | chr4_2:45607710-45607729 | None:intergenic | 10.0% |
| !! | GAAATAATCTTTATATTATT+TGG | - | chr4_2:45607885-45607904 | Msa0602180:intron | 10.0% |
| !! | AATTGAAAAATTCAATTAAA+GGG | + | chr4_2:45609058-45609077 | None:intergenic | 10.0% |
| !! | TAATTGAAAAATTCAATTAA+AGG | + | chr4_2:45609059-45609078 | None:intergenic | 10.0% |
| !! | AAGATAATAAAAAAAATCAA+AGG | + | chr4_2:45609633-45609652 | None:intergenic | 10.0% |
| !! | TACTAAATAGTAAACTAATA+TGG | + | chr4_2:45603929-45603948 | None:intergenic | 15.0% |
| !! | TATTGTATATGATATGATAT+CGG | + | chr4_2:45604025-45604044 | None:intergenic | 15.0% |
| !!! | TTTTACAACTAACTAAAAAT+GGG | + | chr4_2:45604277-45604296 | None:intergenic | 15.0% |
| !!! | TTTTTACAACTAACTAAAAA+TGG | + | chr4_2:45604278-45604297 | None:intergenic | 15.0% |
| !!! | TTTTACAAAAACAGAATAAT+GGG | + | chr4_2:45604351-45604370 | None:intergenic | 15.0% |
| !!! | TTTTTACAAAAACAGAATAA+TGG | + | chr4_2:45604352-45604371 | None:intergenic | 15.0% |
| !!! | AAAAATTGAACTTTTTTAGT+TGG | - | chr4_2:45604368-45604387 | Msa0602180:intron | 15.0% |
| !!! | AAAATTGAACTTTTTTAGTT+GGG | - | chr4_2:45604369-45604388 | Msa0602180:intron | 15.0% |
| !!! | TTTTATGAAAACAGATAAAT+GGG | + | chr4_2:45604776-45604795 | None:intergenic | 15.0% |
| !!! | TTTTTATGAAAACAGATAAA+TGG | + | chr4_2:45604777-45604796 | None:intergenic | 15.0% |
| !!! | AATTTGAACTTTTTTTCATT+TGG | - | chr4_2:45604795-45604814 | Msa0602180:intron | 15.0% |
| !!! | ATTTGAACTTTTTTTCATTT+GGG | - | chr4_2:45604796-45604815 | Msa0602180:intron | 15.0% |
| !! | ATTTAATAATACATACCTTT+GGG | + | chr4_2:45604976-45604995 | None:intergenic | 15.0% |
| !!! | ATTTTAGAATACAGAAAATA+CGG | + | chr4_2:45605591-45605610 | None:intergenic | 15.0% |
| !!! | ATTTTATATGTCTTACAATT+TGG | + | chr4_2:45606974-45606993 | None:intergenic | 15.0% |
| !!! | GTTTTATACTATATATATGT+GGG | + | chr4_2:45607235-45607254 | None:intergenic | 15.0% |
| !! | ACATATATATAGTATAAAAC+CGG | - | chr4_2:45607235-45607254 | Msa0602180:intron | 15.0% |
| !! | ACTGTAATAAAATGATTTAT+CGG | + | chr4_2:45607566-45607585 | None:intergenic | 15.0% |
| !!! | TAGTCTTTATTATTTTTGAA+AGG | - | chr4_2:45607863-45607882 | Msa0602180:intron | 15.0% |
| !! | ATAAAATAAACCCTTAATTT+GGG | + | chr4_2:45608094-45608113 | None:intergenic | 15.0% |
| !! | AATAAAATAAACCCTTAATT+TGG | + | chr4_2:45608095-45608114 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAAGAAGAAGAA+TGG | - | chr4_2:45609425-45609444 | Msa0602180:intron | 15.0% |
| !!! | AATTATTAAGAAAGACTTTT+TGG | - | chr4_2:45609604-45609623 | Msa0602180:intron | 15.0% |
| !!! | AATGAAAATTACTTTTACAA+AGG | + | chr4_2:45610622-45610641 | None:intergenic | 15.0% |
| !!! | AACCTTTTTGAATAATAAAA+AGG | - | chr4_2:45610841-45610860 | Msa0602180:five_prime_UTR | 15.0% |
| !!! | ACCTTTTTGAATAATAAAAA+GGG | - | chr4_2:45610842-45610861 | Msa0602180:five_prime_UTR | 15.0% |
| !!! | TAGGATAGTTATTTTATTCA+CGG | + | chr4_2:45603826-45603845 | None:intergenic | 20.0% |
| !! | ATAGTAAACTAATATGGAAT+GGG | + | chr4_2:45603923-45603942 | None:intergenic | 20.0% |
| !! | AATAGTAAACTAATATGGAA+TGG | + | chr4_2:45603924-45603943 | None:intergenic | 20.0% |
| !! | TTTACAACTAACTAAAAATG+GGG | + | chr4_2:45604276-45604295 | None:intergenic | 20.0% |
| !! | TTTACAAAAACAGAATAATG+GGG | + | chr4_2:45604350-45604369 | None:intergenic | 20.0% |
| !! | GTTACAAAAACAGATAAATT+GGG | + | chr4_2:45604421-45604440 | None:intergenic | 20.0% |
| !! | TGTTACAAAAACAGATAAAT+TGG | + | chr4_2:45604422-45604441 | None:intergenic | 20.0% |
| !!! | AATTTGAACTTTTTATACCT+TGG | - | chr4_2:45604441-45604460 | Msa0602180:intron | 20.0% |
| !! | TTTATGAAAACAGATAAATG+GGG | + | chr4_2:45604775-45604794 | None:intergenic | 20.0% |
| !! | CATTTAATAATACATACCTT+TGG | + | chr4_2:45604977-45604996 | None:intergenic | 20.0% |
| !! | TCCTTCATATAAAAACATTA+GGG | - | chr4_2:45605268-45605287 | Msa0602180:intron | 20.0% |
| !!! | TTTTTAGTAAGAGACTAAAT+TGG | - | chr4_2:45605308-45605327 | Msa0602180:intron | 20.0% |
| !!! | TTTTAGTAAGAGACTAAATT+GGG | - | chr4_2:45605309-45605328 | Msa0602180:intron | 20.0% |
| !!! | GAAAATAAAAAAGTATTACC+TGG | + | chr4_2:45605511-45605530 | None:intergenic | 20.0% |
| !!! | TTTTAGAATACAGAAAATAC+GGG | + | chr4_2:45605590-45605609 | None:intergenic | 20.0% |
| !!! | TGTAATTTCTAGAATCATTT+TGG | - | chr4_2:45605777-45605796 | Msa0602180:intron | 20.0% |
| !! | ATTACACAAATTGAATGATA+TGG | - | chr4_2:45606118-45606137 | Msa0602180:CDS | 20.0% |
| !! | AAATTGAATGATATGGAATA+GGG | - | chr4_2:45606125-45606144 | Msa0602180:CDS | 20.0% |
| !! | CTTAAATATTTGATATTCCA+AGG | - | chr4_2:45607007-45607026 | Msa0602180:intron | 20.0% |
| !!! | GGTTTTATACTATATATATG+TGG | + | chr4_2:45607236-45607255 | None:intergenic | 20.0% |
| !!! | ATATCTAAGATCTGTTTTAA+AGG | - | chr4_2:45607945-45607964 | Msa0602180:intron | 20.0% |
| !! | AGTAAAACTTCAAAAATAAG+TGG | + | chr4_2:45608058-45608077 | None:intergenic | 20.0% |
| !!! | TCTGTTTCTTATTGTTAATA+CGG | - | chr4_2:45608972-45608991 | Msa0602180:intron | 20.0% |
| !! | AAAATGTAAACATCATTCTT+GGG | - | chr4_2:45609032-45609051 | Msa0602180:intron | 20.0% |
| !! | ATGAATACAAAGAAAACTAT+AGG | - | chr4_2:45609243-45609262 | Msa0602180:CDS | 20.0% |
| !!! | AAGATTTTTAAAGATTGTGT+AGG | + | chr4_2:45609797-45609816 | None:intergenic | 20.0% |
| !! | TGATTTATGATAGAGAATTA+TGG | - | chr4_2:45609899-45609918 | Msa0602180:intron | 20.0% |
| !!! | AATGATGATGGAAAAAAAAA+AGG | - | chr4_2:45610737-45610756 | Msa0602180:five_prime_UTR | 20.0% |
| !! | AAAAACATAAATAACTGTAC+TGG | + | chr4_2:45610815-45610834 | None:intergenic | 20.0% |
| !!! | ACCCTTTTTATTATTCAAAA+AGG | + | chr4_2:45610846-45610865 | None:intergenic | 20.0% |
| ! | TATATGATATGATATCGGTA+TGG | + | chr4_2:45604020-45604039 | None:intergenic | 25.0% |
| ! | ATTCTTGTTCTAATCATCTT+TGG | + | chr4_2:45604093-45604112 | None:intergenic | 25.0% |
| !! | TCTTCTATTTTCTATCAACT+TGG | - | chr4_2:45604822-45604841 | Msa0602180:intron | 25.0% |
| !! | ATTGCATATCATGCTTTTAA+TGG | - | chr4_2:45604854-45604873 | Msa0602180:intron | 25.0% |
| !! | ATAATTTGTGTGATCAATGT+GGG | + | chr4_2:45604951-45604970 | None:intergenic | 25.0% |
| !! | AATAATTTGTGTGATCAATG+TGG | + | chr4_2:45604952-45604971 | None:intergenic | 25.0% |
| !! | GTATTATTTATCTTTTGCTG+GGG | + | chr4_2:45605071-45605090 | None:intergenic | 25.0% |
| !! | GGTATTATTTATCTTTTGCT+GGG | + | chr4_2:45605072-45605091 | None:intergenic | 25.0% |
| !! | TGGTATTATTTATCTTTTGC+TGG | + | chr4_2:45605073-45605092 | None:intergenic | 25.0% |
| !!! | TAGTCTGTCATTTTCAAATT+GGG | - | chr4_2:45605096-45605115 | Msa0602180:intron | 25.0% |
| ! | ACAAATTAGTCCATCTATTA+AGG | - | chr4_2:45605120-45605139 | Msa0602180:intron | 25.0% |
| ! | TACGATTAACATACTAACAT+CGG | - | chr4_2:45605193-45605212 | Msa0602180:intron | 25.0% |
| ! | GTCCTTCATATAAAAACATT+AGG | - | chr4_2:45605267-45605286 | Msa0602180:intron | 25.0% |
| ! | CCTTCATATAAAAACATTAG+GGG | - | chr4_2:45605269-45605288 | Msa0602180:intron | 25.0% |
| ! | AAATTAGTAAACACCCAATT+TGG | + | chr4_2:45605356-45605375 | None:intergenic | 25.0% |
| !!! | GTTGTGTTTTGATCTAATTT+AGG | - | chr4_2:45605432-45605451 | Msa0602180:intron | 25.0% |
| !! | TAATTTAGGATGTTAACTTG+TGG | - | chr4_2:45605446-45605465 | Msa0602180:intron | 25.0% |
| ! | GATTATATGTATGTGATTCT+AGG | + | chr4_2:45605618-45605637 | None:intergenic | 25.0% |
| ! | CATTGTCTCTTTAATACAAA+CGG | - | chr4_2:45605731-45605750 | Msa0602180:intron | 25.0% |
| !!! | ATTTTGGAATATTGATAACG+TGG | - | chr4_2:45605793-45605812 | Msa0602180:CDS | 25.0% |
| ! | TACAATTTCAAAGACCAAAT+TGG | - | chr4_2:45605837-45605856 | Msa0602180:intron | 25.0% |
| ! | TTACTCTACTTTACTTTGTT+TGG | - | chr4_2:45605868-45605887 | Msa0602180:intron | 25.0% |
| ! | AATTTGTGTAATACTGCAAA+AGG | + | chr4_2:45606110-45606129 | None:intergenic | 25.0% |
| ! | CAAATTGAATGATATGGAAT+AGG | - | chr4_2:45606124-45606143 | Msa0602180:CDS | 25.0% |
| !!! | AGTATTTTTGTTTCTGTTCA+TGG | + | chr4_2:45606508-45606527 | None:intergenic | 25.0% |
| ! | GAATTACACAACATTAAACT+AGG | + | chr4_2:45606557-45606576 | None:intergenic | 25.0% |
| !! | TATTTTCCAGCTATAAACTA+AGG | + | chr4_2:45607498-45607517 | None:intergenic | 25.0% |
| ! | GTAATAAAATGATTTATCGG+TGG | + | chr4_2:45607563-45607582 | None:intergenic | 25.0% |
| ! | AAAATAAGTGGAAGATTAAG+AGG | + | chr4_2:45608046-45608065 | None:intergenic | 25.0% |
| !!! | ATTTTGGAAAATTATGCAAC+TGG | + | chr4_2:45608381-45608400 | None:intergenic | 25.0% |
| ! | CCTGAACAAAAAGAAAATAA+TGG | + | chr4_2:45608509-45608528 | None:intergenic | 25.0% |
| !! | CCATTATTTTCTTTTTGTTC+AGG | - | chr4_2:45608506-45608525 | Msa0602180:intron | 25.0% |
| ! | TTTATACAGGTTCATTTCAT+CGG | - | chr4_2:45608674-45608693 | Msa0602180:intron | 25.0% |
| !! | TTCATTGTCAATTGATCTTT+TGG | - | chr4_2:45608754-45608773 | Msa0602180:intron | 25.0% |
| ! | AACAATAAGAAACAGATTTG+AGG | + | chr4_2:45608968-45608987 | None:intergenic | 25.0% |
| ! | GAAAATGTAAACATCATTCT+TGG | - | chr4_2:45609031-45609050 | Msa0602180:intron | 25.0% |
| ! | CCTTATCTTGTCTAATAATA+GGG | + | chr4_2:45609094-45609113 | None:intergenic | 25.0% |
| ! | ACCTTATCTTGTCTAATAAT+AGG | + | chr4_2:45609095-45609114 | None:intergenic | 25.0% |
| ! | TTATTAGACAAGATAAGGTT+AGG | - | chr4_2:45609096-45609115 | Msa0602180:intron | 25.0% |
| !!! | ATCAGACAATTTTGAGATTA+AGG | - | chr4_2:45609464-45609483 | Msa0602180:intron | 25.0% |
| !!! | AATTGCAATTTTGATAACAC+CGG | - | chr4_2:45609577-45609596 | Msa0602180:intron | 25.0% |
| ! | AAAATACCAAATTACAAGAG+TGG | + | chr4_2:45609663-45609682 | None:intergenic | 25.0% |
| ! | ATTAACTTTCATGATTTCGA+GGG | + | chr4_2:45609769-45609788 | None:intergenic | 25.0% |
| ! | TATTAACTTTCATGATTTCG+AGG | + | chr4_2:45609770-45609789 | None:intergenic | 25.0% |
| !!! | GGGATTTTAAAAGACTATTT+TGG | + | chr4_2:45609834-45609853 | None:intergenic | 25.0% |
| !!! | TTACAACTTTGTTTTTGTCA+TGG | - | chr4_2:45610144-45610163 | Msa0602180:intron | 25.0% |
| ! | TGAATAGTATGATGCAAAAA+AGG | + | chr4_2:45610309-45610328 | None:intergenic | 25.0% |
| !! | GGAATCTATTACATTACTTT+TGG | + | chr4_2:45610791-45610810 | None:intergenic | 25.0% |
| CTACTACTAATTTGAAGGAA+AGG | - | chr4_2:45603798-45603817 | Msa0602180:three_prime_UTR | 30.0% | |
| ! | TGATTGTTGATTACTTAGCT+TGG | + | chr4_2:45604060-45604079 | None:intergenic | 30.0% |
| TCTGAAAAGAGTTGAGAAAA+TGG | + | chr4_2:45604130-45604149 | None:intergenic | 30.0% | |
| TAAGATGTTAGAGAAAGTAG+TGG | + | chr4_2:45604239-45604258 | None:intergenic | 30.0% | |
| !!! | GTCAATCTTATTTTTGACCA+AGG | + | chr4_2:45604461-45604480 | None:intergenic | 30.0% |
| TTGAAATTCAGTGACTTTCA+TGG | - | chr4_2:45604589-45604608 | Msa0602180:intron | 30.0% | |
| TTTCTCTTTCACTAAGGTTA+TGG | + | chr4_2:45604626-45604645 | None:intergenic | 30.0% | |
| GTATCATTTCTCTTTCACTA+AGG | + | chr4_2:45604632-45604651 | None:intergenic | 30.0% | |
| ! | CTATTTTCTATCAACTTGGT+TGG | - | chr4_2:45604826-45604845 | Msa0602180:intron | 30.0% |
| TCACACAAATTATTTCCCAA+AGG | - | chr4_2:45604958-45604977 | Msa0602180:intron | 30.0% | |
| ! | TTGAAAATGACAGACTAGTT+TGG | + | chr4_2:45605093-45605112 | None:intergenic | 30.0% |
| !!! | CTAGTCTGTCATTTTCAAAT+TGG | - | chr4_2:45605095-45605114 | Msa0602180:intron | 30.0% |
| !!! | AGTCTGTCATTTTCAAATTG+GGG | - | chr4_2:45605097-45605116 | Msa0602180:intron | 30.0% |
| TCCATCTATTAAGGAGTTAA+AGG | - | chr4_2:45605129-45605148 | Msa0602180:intron | 30.0% | |
| CCATCTATTAAGGAGTTAAA+GGG | - | chr4_2:45605130-45605149 | Msa0602180:intron | 30.0% | |
| GGATCATTCATTATAACAGA+AGG | + | chr4_2:45605235-45605254 | None:intergenic | 30.0% | |
| TCTGTTATAATGAATGATCC+AGG | - | chr4_2:45605235-45605254 | Msa0602180:intron | 30.0% | |
| CTGTTATAATGAATGATCCA+GGG | - | chr4_2:45605236-45605255 | Msa0602180:intron | 30.0% | |
| !! | CCCCTAATGTTTTTATATGA+AGG | + | chr4_2:45605272-45605291 | None:intergenic | 30.0% |
| AAAACATTAGGGGATTAACT+TGG | - | chr4_2:45605279-45605298 | Msa0602180:intron | 30.0% | |
| AAACATTAGGGGATTAACTT+GGG | - | chr4_2:45605280-45605299 | Msa0602180:intron | 30.0% | |
| !! | TGTTAACTTGTGGAAAAGTA+TGG | - | chr4_2:45605456-45605475 | Msa0602180:intron | 30.0% |
| !! | GTTAACTTGTGGAAAAGTAT+GGG | - | chr4_2:45605457-45605476 | Msa0602180:intron | 30.0% |
| TGATAACATATCCAAACAGA+AGG | + | chr4_2:45605649-45605668 | None:intergenic | 30.0% | |
| AAGAGACAATGACATTATGT+TGG | + | chr4_2:45605722-45605741 | None:intergenic | 30.0% | |
| !! | ATATTGATAACGTGGATGAT+TGG | - | chr4_2:45605801-45605820 | Msa0602180:CDS | 30.0% |
| !! | TATTGATAACGTGGATGATT+GGG | - | chr4_2:45605802-45605821 | Msa0602180:CDS | 30.0% |
| GAGTAACTAACTATCCAATT+TGG | + | chr4_2:45605854-45605873 | None:intergenic | 30.0% | |
| TTCACTATCTCATAGTATAC+AGG | + | chr4_2:45605977-45605996 | None:intergenic | 30.0% | |
| AGAATGTAGATACTATTTGC+AGG | - | chr4_2:45606045-45606064 | Msa0602180:intron | 30.0% | |
| ATTTCAAATCGTCCTTCTTT+AGG | - | chr4_2:45606154-45606173 | Msa0602180:CDS | 30.0% | |
| TAAATCAGAACACCTAAAGA+AGG | + | chr4_2:45606169-45606188 | None:intergenic | 30.0% | |
| CAAATAAGCAGACATAGAAT+TGG | + | chr4_2:45606255-45606274 | None:intergenic | 30.0% | |
| CTTGTATCATTGTATAGCAA+TGG | - | chr4_2:45606306-45606325 | Msa0602180:intron | 30.0% | |
| TAACCTATGTATCAATCAAC+TGG | - | chr4_2:45606381-45606400 | Msa0602180:intron | 30.0% | |
| TTACCAGTTGATTGATACAT+AGG | + | chr4_2:45606387-45606406 | None:intergenic | 30.0% | |
| ATCAATCAACTGGTAATTGA+AGG | - | chr4_2:45606391-45606410 | Msa0602180:intron | 30.0% | |
| TCAATCAACTGGTAATTGAA+GGG | - | chr4_2:45606392-45606411 | Msa0602180:intron | 30.0% | |
| ! | CAATTTTTAAACGAGTCTTC+AGG | - | chr4_2:45606444-45606463 | Msa0602180:intron | 30.0% |
| !!! | TTTTTTGTTTAGGTGAGGAA+TGG | - | chr4_2:45606479-45606498 | Msa0602180:intron | 30.0% |
| GAAACAAAAATACTTGCCAA+AGG | - | chr4_2:45606514-45606533 | Msa0602180:intron | 30.0% | |
| ! | CAACTAGTTATGAGCATTTT+TGG | + | chr4_2:45606648-45606667 | None:intergenic | 30.0% |
| AAAGGAGTTGAAGGAATTAA+AGG | - | chr4_2:45606714-45606733 | Msa0602180:intron | 30.0% | |
| TAATTTAGTAGCTGTGACTA+GGG | + | chr4_2:45606753-45606772 | None:intergenic | 30.0% | |
| TTAATTTAGTAGCTGTGACT+AGG | + | chr4_2:45606754-45606773 | None:intergenic | 30.0% | |
| CTATTAATGAGCACAAGAAA+TGG | + | chr4_2:45606830-45606849 | None:intergenic | 30.0% | |
| CTTAACTGTAGACAAACAAA+TGG | + | chr4_2:45606874-45606893 | None:intergenic | 30.0% | |
| AAAACCGGATGTAATAATGT+AGG | - | chr4_2:45607250-45607269 | Msa0602180:intron | 30.0% | |
| TATGCCTACATTATTACATC+CGG | + | chr4_2:45607257-45607276 | None:intergenic | 30.0% | |
| !! | TATCACAAAACTTGTTGTCA+AGG | + | chr4_2:45607424-45607443 | None:intergenic | 30.0% |
| TTGATTCCTTAGTTTATAGC+TGG | - | chr4_2:45607489-45607508 | Msa0602180:intron | 30.0% | |
| TAAAATCAAGTGGTTGGAAA+TGG | + | chr4_2:45607734-45607753 | None:intergenic | 30.0% | |
| ATCTTGTCAGTAAAATCAAG+TGG | + | chr4_2:45607744-45607763 | None:intergenic | 30.0% | |
| ! | ACTGACAAGATAGAATTTTG+TGG | - | chr4_2:45607753-45607772 | Msa0602180:intron | 30.0% |
| ! | CTGACAAGATAGAATTTTGT+GGG | - | chr4_2:45607754-45607773 | Msa0602180:intron | 30.0% |
| AAAATGTTCTTGGGAAAGAA+GGG | - | chr4_2:45607818-45607837 | Msa0602180:intron | 30.0% | |
| ! | TAAGAGAGTAATTTTGCATC+TGG | - | chr4_2:45607976-45607995 | Msa0602180:intron | 30.0% |
| ! | AAATAAACCCTTAATTTGGG+AGG | + | chr4_2:45608091-45608110 | None:intergenic | 30.0% |
| ! | ATAGTCTCACAACAAACTTT+TGG | + | chr4_2:45608135-45608154 | None:intergenic | 30.0% |
| ! | ATGTGTCAATCTAGTGATTT+TGG | + | chr4_2:45608397-45608416 | None:intergenic | 30.0% |
| GATTCACCATACAATACAAA+GGG | + | chr4_2:45608730-45608749 | None:intergenic | 30.0% | |
| AGATTCACCATACAATACAA+AGG | + | chr4_2:45608731-45608750 | None:intergenic | 30.0% | |
| ATACATCTTTACAGTCTTCA+CGG | - | chr4_2:45608802-45608821 | Msa0602180:intron | 30.0% | |
| TCGATAATGTTCTTCATTTC+AGG | - | chr4_2:45608882-45608901 | Msa0602180:intron | 30.0% | |
| AATAAGAAACAGATTTGAGG+AGG | + | chr4_2:45608965-45608984 | None:intergenic | 30.0% | |
| CCCTATTATTAGACAAGATA+AGG | - | chr4_2:45609091-45609110 | Msa0602180:intron | 30.0% | |
| CTTCTTAGTATGGAATCAAA+AGG | + | chr4_2:45609184-45609203 | None:intergenic | 30.0% | |
| !! | GAATGAATGTTTTCAAGATC+AGG | - | chr4_2:45609268-45609287 | Msa0602180:CDS | 30.0% |
| ! | AGGGTATCATGATCATAAAA+AGG | - | chr4_2:45609312-45609331 | Msa0602180:intron | 30.0% |
| !!! | ATTCTAGGTAATTTTTGGGT+AGG | + | chr4_2:45609348-45609367 | None:intergenic | 30.0% |
| ACCCAAAAATTACCTAGAAT+TGG | - | chr4_2:45609348-45609367 | Msa0602180:intron | 30.0% | |
| ! | CCCAATTCTAGGTAATTTTT+GGG | + | chr4_2:45609352-45609371 | None:intergenic | 30.0% |
| CCCAAAAATTACCTAGAATT+GGG | - | chr4_2:45609349-45609368 | Msa0602180:intron | 30.0% | |
| ! | TCCCAATTCTAGGTAATTTT+TGG | + | chr4_2:45609353-45609372 | None:intergenic | 30.0% |
| AAAAATTACCTAGAATTGGG+AGG | - | chr4_2:45609352-45609371 | Msa0602180:intron | 30.0% | |
| AAAATTACCTAGAATTGGGA+GGG | - | chr4_2:45609353-45609372 | Msa0602180:intron | 30.0% | |
| TAAAACGTAGAATCGTAACA+AGG | - | chr4_2:45609389-45609408 | Msa0602180:intron | 30.0% | |
| AAAGAAGAAGAATGGTAACA+AGG | - | chr4_2:45609433-45609452 | Msa0602180:intron | 30.0% | |
| !!! | CAATTTTGAGATTAAGGTAC+CGG | - | chr4_2:45609470-45609489 | Msa0602180:intron | 30.0% |
| !! | ATTGCAATTTTGATAACACC+GGG | - | chr4_2:45609578-45609597 | Msa0602180:intron | 30.0% |
| TCTTTCTTAATAATTCTCCC+CGG | + | chr4_2:45609599-45609618 | None:intergenic | 30.0% | |
| ! | TTTTTGTGTTTTTCCCCTTT+CGG | - | chr4_2:45610043-45610062 | Msa0602180:intron | 30.0% |
| TTGTGTTACATCATGCAAAT+TGG | + | chr4_2:45610090-45610109 | None:intergenic | 30.0% | |
| TTGGCTCATTATAATTGTAG+TGG | - | chr4_2:45610247-45610266 | Msa0602180:intron | 30.0% | |
| TGGCTCATTATAATTGTAGT+GGG | - | chr4_2:45610248-45610267 | Msa0602180:intron | 30.0% | |
| AAATAGTAGAGTTGTTGCAT+TGG | + | chr4_2:45610285-45610304 | None:intergenic | 30.0% | |
| ATACAATGTTTAGGTGGAAA+CGG | - | chr4_2:45610424-45610443 | Msa0602180:intron | 30.0% | |
| GAGATCAGAAGAATGATTAT+TGG | - | chr4_2:45610520-45610539 | Msa0602180:CDS | 30.0% | |
| AAGCACATACAGATCTAATA+TGG | + | chr4_2:45610674-45610693 | None:intergenic | 30.0% | |
| GATGGAAAAAAAAAAGGTTC+AGG | - | chr4_2:45610743-45610762 | Msa0602180:five_prime_UTR | 30.0% | |
| ! | AGGTCTGAGATTCAATAATT+TGG | - | chr4_2:45610763-45610782 | Msa0602180:five_prime_UTR | 30.0% |
| AACATAAATAACTGTACTGG+AGG | + | chr4_2:45610812-45610831 | None:intergenic | 30.0% | |
| TAGCTGAATCAGATAGTAGT+AGG | + | chr4_2:45603845-45603864 | None:intergenic | 35.0% | |
| !! | TTGATTACTTAGCTTGGTGT+TGG | + | chr4_2:45604054-45604073 | None:intergenic | 35.0% |
| GTTCTAATCATCTTTGGCAA+CGG | + | chr4_2:45604087-45604106 | None:intergenic | 35.0% | |
| TGAGTTAAGTCTTACGAACT+GGG | + | chr4_2:45604489-45604508 | None:intergenic | 35.0% | |
| TTGAGTTAAGTCTTACGAAC+TGG | + | chr4_2:45604490-45604509 | None:intergenic | 35.0% | |
| TTCGTAAGACTTAACTCAAC+TGG | - | chr4_2:45604491-45604510 | Msa0602180:intron | 35.0% | |
| AGACTTAACTCAACTGGTTA+AGG | - | chr4_2:45604497-45604516 | Msa0602180:intron | 35.0% | |
| ATCGAGATCCACTACATTTA+AGG | + | chr4_2:45604697-45604716 | None:intergenic | 35.0% | |
| AAACTGTCAGGGAACAAATT+GGG | + | chr4_2:45605029-45605048 | None:intergenic | 35.0% | |
| AAAACTGTCAGGGAACAAAT+TGG | + | chr4_2:45605030-45605049 | None:intergenic | 35.0% | |
| CCCTTTAACTCCTTAATAGA+TGG | + | chr4_2:45605133-45605152 | None:intergenic | 35.0% | |
| ! | TAGTATTTTTCTCCCTTGTC+TGG | + | chr4_2:45605169-45605188 | None:intergenic | 35.0% |
| AAAGTTGTGAGAGACCAAAT+TGG | - | chr4_2:45605339-45605358 | Msa0602180:intron | 35.0% | |
| AAGTTGTGAGAGACCAAATT+GGG | - | chr4_2:45605340-45605359 | Msa0602180:intron | 35.0% | |
| CATAGTGTAACTGAATATGC+TGG | - | chr4_2:45605410-45605429 | Msa0602180:intron | 35.0% | |
| ATGGGAGAATTTAATCTCCA+TGG | - | chr4_2:45605475-45605494 | Msa0602180:intron | 35.0% | |
| TGGGAGAATTTAATCTCCAT+GGG | - | chr4_2:45605476-45605495 | Msa0602180:intron | 35.0% | |
| ATCAAGTTCATCCTTCTGTT+TGG | - | chr4_2:45605635-45605654 | Msa0602180:intron | 35.0% | |
| ACATTATGTTGGCAATGCAT+AGG | + | chr4_2:45605711-45605730 | None:intergenic | 35.0% | |
| !!! | TGCTGCCTTCTTTTTTGTTT+AGG | - | chr4_2:45606469-45606488 | Msa0602180:intron | 35.0% |
| CCTCACCTAAACAAAAAAGA+AGG | + | chr4_2:45606477-45606496 | None:intergenic | 35.0% | |
| !!! | CCTTCTTTTTTGTTTAGGTG+AGG | - | chr4_2:45606474-45606493 | Msa0602180:intron | 35.0% |
| CATTGCACATATCAGCAATA+GGG | + | chr4_2:45606612-45606631 | None:intergenic | 35.0% | |
| ACATTGCACATATCAGCAAT+AGG | + | chr4_2:45606613-45606632 | None:intergenic | 35.0% | |
| CATAACTAGTTGTAGCTTTC+AGG | - | chr4_2:45606656-45606675 | Msa0602180:intron | 35.0% | |
| AATGAGCACAAGAAATGGTT+GGG | + | chr4_2:45606825-45606844 | None:intergenic | 35.0% | |
| TAATGAGCACAAGAAATGGT+TGG | + | chr4_2:45606826-45606845 | None:intergenic | 35.0% | |
| !! | TCAACTTTGAAGCTTATCTC+TGG | - | chr4_2:45606917-45606936 | Msa0602180:CDS | 35.0% |
| !! | CAACTTTGAAGCTTATCTCT+GGG | - | chr4_2:45606918-45606937 | Msa0602180:CDS | 35.0% |
| !! | AACTTTGAAGCTTATCTCTG+GGG | - | chr4_2:45606919-45606938 | Msa0602180:CDS | 35.0% |
| GCAGAAAAGACAAATTCACT+AGG | + | chr4_2:45607039-45607058 | None:intergenic | 35.0% | |
| AACAAGATGTGGTGTACTAA+TGG | - | chr4_2:45607129-45607148 | Msa0602180:intron | 35.0% | |
| ACAAGATGTGGTGTACTAAT+GGG | - | chr4_2:45607130-45607149 | Msa0602180:intron | 35.0% | |
| CATACTAATGTTTGAGCAGT+TGG | + | chr4_2:45607156-45607175 | None:intergenic | 35.0% | |
| AAACATGCTTAGCATGGAAA+TGG | + | chr4_2:45607210-45607229 | None:intergenic | 35.0% | |
| TGATTGTGTTGAATTGCATC+AGG | - | chr4_2:45607308-45607327 | Msa0602180:intron | 35.0% | |
| ACTGCATTTATCATCGAGAA+GGG | - | chr4_2:45607375-45607394 | Msa0602180:CDS | 35.0% | |
| AGCTGGAAAATATCCTTCTA+TGG | - | chr4_2:45607506-45607525 | Msa0602180:intron | 35.0% | |
| TTCAAGTACACTTCCATAGA+AGG | + | chr4_2:45607522-45607541 | None:intergenic | 35.0% | |
| ! | GACAAACATCATTGATTGTC+AGG | + | chr4_2:45607616-45607635 | None:intergenic | 35.0% |
| CCCTAGTTTATCCAATTTCT+GGG | + | chr4_2:45607655-45607674 | None:intergenic | 35.0% | |
| CCCAGAAATTGGATAAACTA+GGG | - | chr4_2:45607652-45607671 | Msa0602180:CDS | 35.0% | |
| TCCCTAGTTTATCCAATTTC+TGG | + | chr4_2:45607656-45607675 | None:intergenic | 35.0% | |
| TGTCAGTAAAATCAAGTGGT+TGG | + | chr4_2:45607740-45607759 | None:intergenic | 35.0% | |
| GAAAATGTTCTTGGGAAAGA+AGG | - | chr4_2:45607817-45607836 | Msa0602180:intron | 35.0% | |
| !! | ATTATTTGGTAGTGCTCGTT+TGG | - | chr4_2:45607899-45607918 | Msa0602180:intron | 35.0% |
| ! | ACTCTTTTCCTCCCAAATTA+AGG | - | chr4_2:45608080-45608099 | Msa0602180:intron | 35.0% |
| ! | CTCTTTTCCTCCCAAATTAA+GGG | - | chr4_2:45608081-45608100 | Msa0602180:intron | 35.0% |
| GGAAAATTATGCAACTGGAA+AGG | + | chr4_2:45608376-45608395 | None:intergenic | 35.0% | |
| !! | AAAACCACTTTTGCTTTGTC+AGG | - | chr4_2:45608461-45608480 | Msa0602180:intron | 35.0% |
| ACATGACTGCATAATACCAA+GGG | + | chr4_2:45608588-45608607 | None:intergenic | 35.0% | |
| ATAAACTGAAACTCCCCAAT+AGG | + | chr4_2:45608659-45608678 | None:intergenic | 35.0% | |
| !! | TCCTGCTAAATTAGTTTGCA+CGG | - | chr4_2:45608856-45608875 | Msa0602180:intron | 35.0% |
| CTTATGTGTATTCTGTAGCT+CGG | - | chr4_2:45608906-45608925 | Msa0602180:intron | 35.0% | |
| TTATGTGTATTCTGTAGCTC+GGG | - | chr4_2:45608907-45608926 | Msa0602180:intron | 35.0% | |
| ATGATAGCATTAGAGAGAGT+TGG | - | chr4_2:45609120-45609139 | Msa0602180:intron | 35.0% | |
| !! | AGTTGGTAGTAGCACAAATT+AGG | - | chr4_2:45609137-45609156 | Msa0602180:intron | 35.0% |
| !! | GTTGGTAGTAGCACAAATTA+GGG | - | chr4_2:45609138-45609157 | Msa0602180:intron | 35.0% |
| CTGATCTACTCTTCTTAGTA+TGG | + | chr4_2:45609194-45609213 | None:intergenic | 35.0% | |
| ACTAAGAAGAGTAGATCAGA+TGG | - | chr4_2:45609195-45609214 | Msa0602180:intron | 35.0% | |
| AAATTACCTAGAATTGGGAG+GGG | - | chr4_2:45609354-45609373 | Msa0602180:intron | 35.0% | |
| TAAAAGACCGCAATTGAAAC+CGG | + | chr4_2:45609492-45609511 | None:intergenic | 35.0% | |
| ! | CGTAAAATCGTGCGATTTTA+CGG | - | chr4_2:45609550-45609569 | Msa0602180:intron | 35.0% |
| !! | TTGCAATTTTGATAACACCG+GGG | - | chr4_2:45609579-45609598 | Msa0602180:intron | 35.0% |
| AGTCATCCACTCTTGTAATT+TGG | - | chr4_2:45609654-45609673 | Msa0602180:intron | 35.0% | |
| !! | AAACCATTGATTTCTAAGGG+GGG | + | chr4_2:45609868-45609887 | None:intergenic | 35.0% |
| !! | CAAACCATTGATTTCTAAGG+GGG | + | chr4_2:45609869-45609888 | None:intergenic | 35.0% |
| !! | CCAAACCATTGATTTCTAAG+GGG | + | chr4_2:45609870-45609889 | None:intergenic | 35.0% |
| !! | GCCAAACCATTGATTTCTAA+GGG | + | chr4_2:45609871-45609890 | None:intergenic | 35.0% |
| !! | AGCCAAACCATTGATTTCTA+AGG | + | chr4_2:45609872-45609891 | None:intergenic | 35.0% |
| CACGCAATGCATAAGAAATA+TGG | + | chr4_2:45609999-45610018 | None:intergenic | 35.0% | |
| ACAAAATCAACAAGCCGAAA+GGG | + | chr4_2:45610060-45610079 | None:intergenic | 35.0% | |
| AACAAAATCAACAAGCCGAA+AGG | + | chr4_2:45610061-45610080 | None:intergenic | 35.0% | |
| !!! | CGGCTTGTTGATTTTGTTTT+TGG | - | chr4_2:45610063-45610082 | Msa0602180:intron | 35.0% |
| ATAATGAGCCAACATGATCT+TGG | + | chr4_2:45610239-45610258 | None:intergenic | 35.0% | |
| !! | TTATAATTGTAGTGGGCTAG+TGG | - | chr4_2:45610255-45610274 | Msa0602180:intron | 35.0% |
| ! | TCTCATGTGCTACTAATTTC+AGG | - | chr4_2:45610342-45610361 | Msa0602180:intron | 35.0% |
| TACTAATTTCAGGATTGTGC+TGG | - | chr4_2:45610352-45610371 | Msa0602180:intron | 35.0% | |
| TTGAAGCAAATCATTCCTCT+TGG | - | chr4_2:45610712-45610731 | Msa0602180:five_prime_UTR | 35.0% | |
| TTCCTCTTGGAAAATGATGA+TGG | - | chr4_2:45610725-45610744 | Msa0602180:five_prime_UTR | 35.0% | |
| ! | TTCCATCATCATTTTCCAAG+AGG | + | chr4_2:45610730-45610749 | None:intergenic | 35.0% |
| TACAGTACCAACAATAGGTA+AGG | + | chr4_2:45610892-45610911 | None:intergenic | 35.0% | |
| ACCTATTGTTGGTACTGTAT+TGG | - | chr4_2:45610893-45610912 | Msa0602180:five_prime_UTR | 35.0% | |
| TCCAATACAGTACCAACAAT+AGG | + | chr4_2:45610897-45610916 | None:intergenic | 35.0% | |
| CAGCGCTACTACTAATTTGA+AGG | - | chr4_2:45603793-45603812 | Msa0602180:three_prime_UTR | 40.0% | |
| !!! | GTGTTTTGGCAGTTGAGATA+AGG | + | chr4_2:45603896-45603915 | None:intergenic | 40.0% |
| ! | ATGGAATGGGTGTAGTGTTT+TGG | + | chr4_2:45603910-45603929 | None:intergenic | 40.0% |
| ATCGAAGAGGAATGAAGTAG+TGG | + | chr4_2:45604196-45604215 | None:intergenic | 40.0% | |
| GAGTTAAGTCTTACGAACTG+GGG | + | chr4_2:45604488-45604507 | None:intergenic | 40.0% | |
| TGGTTAAGGATCGTCAAAGT+TGG | - | chr4_2:45604511-45604530 | Msa0602180:intron | 40.0% | |
| ATCCTTAACCAGTTCGAACT+CGG | + | chr4_2:45604547-45604566 | None:intergenic | 40.0% | |
| AATTCAGTGACTTTCATGGC+AGG | - | chr4_2:45604593-45604612 | Msa0602180:intron | 40.0% | |
| ! | AGATCCACTACATTTAAGGC+GGG | + | chr4_2:45604693-45604712 | None:intergenic | 40.0% |
| GAGATCCACTACATTTAAGG+CGG | + | chr4_2:45604694-45604713 | None:intergenic | 40.0% | |
| ATTAAGGAGTTAAAGGGCCA+AGG | - | chr4_2:45605136-45605155 | Msa0602180:intron | 40.0% | |
| CAAGGTTCAAATCCAGACAA+GGG | - | chr4_2:45605154-45605173 | Msa0602180:intron | 40.0% | |
| ATGAAGGACAAATTAGTCCC+TGG | + | chr4_2:45605256-45605275 | None:intergenic | 40.0% | |
| CTACAATTCCATGACCAACA+TGG | + | chr4_2:45605547-45605566 | None:intergenic | 40.0% | |
| CATGTTGGTCATGGAATTGT+AGG | - | chr4_2:45605545-45605564 | Msa0602180:intron | 40.0% | |
| TACAGAAAATACGGGAGACT+TGG | + | chr4_2:45605582-45605601 | None:intergenic | 40.0% | |
| CTATGTCTGCTTATTTGCAG+AGG | - | chr4_2:45606258-45606277 | Msa0602180:intron | 40.0% | |
| TGCTTATTTGCAGAGGAGTA+TGG | - | chr4_2:45606265-45606284 | Msa0602180:intron | 40.0% | |
| ! | TTATTTGCAGAGGAGTATGG+AGG | - | chr4_2:45606268-45606287 | Msa0602180:intron | 40.0% |
| ! | TATTTGCAGAGGAGTATGGA+GGG | - | chr4_2:45606269-45606288 | Msa0602180:intron | 40.0% |
| !! | GGATCTGTTGGTCTTTCTTA+TGG | - | chr4_2:45606349-45606368 | Msa0602180:intron | 40.0% |
| !! | AAACTAGAGTGTCGAACCTT+TGG | + | chr4_2:45606533-45606552 | None:intergenic | 40.0% |
| AACTAGTTGTAGCTTTCAGG+TGG | - | chr4_2:45606659-45606678 | Msa0602180:intron | 40.0% | |
| !! | AGCTCAATTGGTTTGAGCTA+AGG | - | chr4_2:45606688-45606707 | Msa0602180:intron | 40.0% |
| !! | GCTCAATTGGTTTGAGCTAA+GGG | - | chr4_2:45606689-45606708 | Msa0602180:intron | 40.0% |
| TGGTTTGAGCTAAGGGTTAA+AGG | - | chr4_2:45606696-45606715 | Msa0602180:intron | 40.0% | |
| CTAAGGGTTAAAGGAGTTGA+AGG | - | chr4_2:45606705-45606724 | Msa0602180:intron | 40.0% | |
| AATTCACTAGGCTAAGTCCT+TGG | + | chr4_2:45607027-45607046 | None:intergenic | 40.0% | |
| ! | GAATTTGTCTTTTCTGCAGC+TGG | - | chr4_2:45607042-45607061 | Msa0602180:intron | 40.0% |
| GATGGGGGATATGTACTTAA+CGG | - | chr4_2:45607105-45607124 | Msa0602180:intron | 40.0% | |
| ATGGGGGATATGTACTTAAC+GGG | - | chr4_2:45607106-45607125 | Msa0602180:intron | 40.0% | |
| TACTTAACGGGAACAAGATG+TGG | - | chr4_2:45607118-45607137 | Msa0602180:intron | 40.0% | |
| CACTGCATTTATCATCGAGA+AGG | - | chr4_2:45607374-45607393 | Msa0602180:CDS | 40.0% | |
| AAGGTTCAGTACAATTACCC+AGG | + | chr4_2:45607405-45607424 | None:intergenic | 40.0% | |
| ATTCAGTACTGCCCAGAAAT+TGG | - | chr4_2:45607641-45607660 | Msa0602180:CDS | 40.0% | |
| GCCCAGAAATTGGATAAACT+AGG | - | chr4_2:45607651-45607670 | Msa0602180:CDS | 40.0% | |
| ! | CTTCGAGAATTGCTTTGTTC+CGG | - | chr4_2:45607792-45607811 | Msa0602180:CDS | 40.0% |
| TTCCGGAGGAAAATGTTCTT+GGG | - | chr4_2:45607809-45607828 | Msa0602180:intron | 40.0% | |
| ! | TTCCCAAGAACATTTTCCTC+CGG | + | chr4_2:45607814-45607833 | None:intergenic | 40.0% |
| AAGCTGATATGATGCAAGAG+AGG | + | chr4_2:45608178-45608197 | None:intergenic | 40.0% | |
| CATGACTGCATAATACCAAG+GGG | + | chr4_2:45608587-45608606 | None:intergenic | 40.0% | |
| GACATGACTGCATAATACCA+AGG | + | chr4_2:45608589-45608608 | None:intergenic | 40.0% | |
| CTCTTTGTCGAACATAAGGA+AGG | + | chr4_2:45608622-45608641 | None:intergenic | 40.0% | |
| TGCTCTCTTTGTCGAACATA+AGG | + | chr4_2:45608626-45608645 | None:intergenic | 40.0% | |
| TGGGGAGTTTCAGTTTATAC+AGG | - | chr4_2:45608661-45608680 | Msa0602180:intron | 40.0% | |
| ATCGTGCCCTTTGTATTGTA+TGG | - | chr4_2:45608721-45608740 | Msa0602180:intron | 40.0% | |
| GGTATGAGATTCTAATGCCA+TGG | - | chr4_2:45608823-45608842 | Msa0602180:intron | 40.0% | |
| GTAGCACAAATTAGGGAGTT+TGG | - | chr4_2:45609145-45609164 | Msa0602180:intron | 40.0% | |
| AAGAAGAGTAGATCAGATGG+AGG | - | chr4_2:45609198-45609217 | Msa0602180:intron | 40.0% | |
| AGAAGAGTAGATCAGATGGA+GGG | - | chr4_2:45609199-45609218 | Msa0602180:intron | 40.0% | |
| TCAAGATCAGGATCTTGCTT+AGG | - | chr4_2:45609280-45609299 | Msa0602180:intron | 40.0% | |
| ATCAGGATCTTGCTTAGGAT+TGG | - | chr4_2:45609285-45609304 | Msa0602180:intron | 40.0% | |
| AATTACCTAGAATTGGGAGG+GGG | - | chr4_2:45609355-45609374 | Msa0602180:intron | 40.0% | |
| !! | TAAGGTACCGGTTTCAATTG+CGG | - | chr4_2:45609482-45609501 | Msa0602180:intron | 40.0% |
| AAACGATCTTACTCGTTCCA+TGG | - | chr4_2:45609518-45609537 | Msa0602180:intron | 40.0% | |
| AACGATCTTACTCGTTCCAT+GGG | - | chr4_2:45609519-45609538 | Msa0602180:intron | 40.0% | |
| CCCCTTAGAAATCAATGGTT+TGG | - | chr4_2:45609867-45609886 | Msa0602180:intron | 40.0% | |
| CAAAATCAACAAGCCGAAAG+GGG | + | chr4_2:45610059-45610078 | None:intergenic | 40.0% | |
| AACACAAGTACAGTGTGTAG+TGG | - | chr4_2:45610103-45610122 | Msa0602180:intron | 40.0% | |
| AACTTGAGCCAAGATCATGT+TGG | - | chr4_2:45610228-45610247 | Msa0602180:intron | 40.0% | |
| TTGCAGGCGATACAATGTTT+AGG | - | chr4_2:45610415-45610434 | Msa0602180:intron | 40.0% | |
| TATGTGAACGAGTATCCAAC+CGG | - | chr4_2:45610448-45610467 | Msa0602180:intron | 40.0% | |
| TCTTCTGATCTCACTTGTTC+CGG | + | chr4_2:45610512-45610531 | None:intergenic | 40.0% | |
| TATTGGACGTGATCTCTTCA+AGG | - | chr4_2:45610537-45610556 | Msa0602180:CDS | 40.0% | |
| AGTTCCAGTCAAAATCCAAG+GGG | + | chr4_2:45610580-45610599 | None:intergenic | 40.0% | |
| CAGTTCCAGTCAAAATCCAA+GGG | + | chr4_2:45610581-45610600 | None:intergenic | 40.0% | |
| TCAGTTCCAGTCAAAATCCA+AGG | + | chr4_2:45610582-45610601 | None:intergenic | 40.0% | |
| TTACAAAGGAATCATCTCCG+AGG | + | chr4_2:45610608-45610627 | None:intergenic | 40.0% | |
| GGCAGTTGAGATAAGGATGA+AGG | + | chr4_2:45603889-45603908 | None:intergenic | 45.0% | |
| GTATCTGAGTGTCATCGAAG+AGG | + | chr4_2:45604209-45604228 | None:intergenic | 45.0% | |
| CTTCGATGACACTCAGATAC+AGG | - | chr4_2:45604209-45604228 | Msa0602180:CDS | 45.0% | |
| TAAGTCTTACGAACTGGGGT+GGG | + | chr4_2:45604484-45604503 | None:intergenic | 45.0% | |
| TTAAGTCTTACGAACTGGGG+TGG | + | chr4_2:45604485-45604504 | None:intergenic | 45.0% | |
| ATCCGAGTTCGAACTGGTTA+AGG | - | chr4_2:45604542-45604561 | Msa0602180:intron | 45.0% | |
| CTTTCCCGCCTTAAATGTAG+TGG | - | chr4_2:45604686-45604705 | Msa0602180:intron | 45.0% | |
| GTGGATCTCGATCTCAGTTT+CGG | - | chr4_2:45604705-45604724 | Msa0602180:intron | 45.0% | |
| ATCTCGATCTCAGTTTCGGA+TGG | - | chr4_2:45604709-45604728 | Msa0602180:intron | 45.0% | |
| ! | ATCAATGTGGGAAGCATGAG+GGG | + | chr4_2:45604939-45604958 | None:intergenic | 45.0% |
| ! | GATCAATGTGGGAAGCATGA+GGG | + | chr4_2:45604940-45604959 | None:intergenic | 45.0% |
| ! | TGATCAATGTGGGAAGCATG+AGG | + | chr4_2:45604941-45604960 | None:intergenic | 45.0% |
| CCTTGTCTGGATTTGAACCT+TGG | + | chr4_2:45605156-45605175 | None:intergenic | 45.0% | |
| CCAAGGTTCAAATCCAGACA+AGG | - | chr4_2:45605153-45605172 | Msa0602180:intron | 45.0% | |
| CACATATCAGCAATAGGGCA+AGG | + | chr4_2:45606607-45606626 | None:intergenic | 45.0% | |
| ! | AGTTGTAGCTTTCAGGTGGT+TGG | - | chr4_2:45606663-45606682 | Msa0602180:intron | 45.0% |
| ! | GTTGTAGCTTTCAGGTGGTT+GGG | - | chr4_2:45606664-45606683 | Msa0602180:intron | 45.0% |
| ! | CTTATCTCTGGGGATCATGT+GGG | - | chr4_2:45606929-45606948 | Msa0602180:CDS | 45.0% |
| TGCAAAGCTGATCGTGTAGA+TGG | - | chr4_2:45607087-45607106 | Msa0602180:intron | 45.0% | |
| GCAAAGCTGATCGTGTAGAT+GGG | - | chr4_2:45607088-45607107 | Msa0602180:intron | 45.0% | |
| CAAAGCTGATCGTGTAGATG+GGG | - | chr4_2:45607089-45607108 | Msa0602180:intron | 45.0% | |
| AAAGCTGATCGTGTAGATGG+GGG | - | chr4_2:45607090-45607109 | Msa0602180:intron | 45.0% | |
| TGCTTAGCATGGAAATGGCA+TGG | + | chr4_2:45607205-45607224 | None:intergenic | 45.0% | |
| TGGGACAAACATGCTTAGCA+TGG | + | chr4_2:45607216-45607235 | None:intergenic | 45.0% | |
| CAAAAACAGACGCAACAGCA+GGG | - | chr4_2:45607340-45607359 | Msa0602180:CDS | 45.0% | |
| TTGGATAAACTAGGGATGCG+AGG | - | chr4_2:45607660-45607679 | Msa0602180:CDS | 45.0% | |
| GTTCCGGAGGAAAATGTTCT+TGG | - | chr4_2:45607808-45607827 | Msa0602180:intron | 45.0% | |
| GTTCTTGGGAAAGAAGGGAA+AGG | - | chr4_2:45607823-45607842 | Msa0602180:intron | 45.0% | |
| AGCCACTCACTAAGAACGTA+AGG | - | chr4_2:45608274-45608293 | Msa0602180:intron | 45.0% | |
| GTCCTTACGTTCTTAGTGAG+TGG | + | chr4_2:45608279-45608298 | None:intergenic | 45.0% | |
| GACACCTGACAAAGCAAAAG+TGG | + | chr4_2:45608468-45608487 | None:intergenic | 45.0% | |
| GGAGTCTATGTCATGATGTC+TGG | - | chr4_2:45608527-45608546 | Msa0602180:intron | 45.0% | |
| CTATGTCATGATGTCTGGAC+TGG | - | chr4_2:45608532-45608551 | Msa0602180:intron | 45.0% | |
| ! | CATGATGTCTGGACTGGATT+TGG | - | chr4_2:45608538-45608557 | Msa0602180:intron | 45.0% |
| ! | TGTCTGGACTGGATTTGGAA+AGG | - | chr4_2:45608543-45608562 | Msa0602180:intron | 45.0% |
| !!! | GAAAGGCTTGTTTTAGCAGC+CGG | - | chr4_2:45608560-45608579 | Msa0602180:intron | 45.0% |
| GTTCGACAAAGAGAGCAGTT+CGG | - | chr4_2:45608629-45608648 | Msa0602180:intron | 45.0% | |
| AGCAGGAGAAAATAGCACCA+TGG | + | chr4_2:45608843-45608862 | None:intergenic | 45.0% | |
| GCCGTGCAAACTAATTTAGC+AGG | + | chr4_2:45608860-45608879 | None:intergenic | 45.0% | |
| CAACGGAAAAGTTGACCCAA+AGG | - | chr4_2:45608937-45608956 | Msa0602180:intron | 45.0% | |
| !! | AGATTTGAGGAGGCACCTTT+GGG | + | chr4_2:45608955-45608974 | None:intergenic | 45.0% |
| !! | TGGAGGGTATCCTAATCACT+AGG | - | chr4_2:45609215-45609234 | Msa0602180:intron | 45.0% |
| !! | GGAGGGTATCCTAATCACTA+GGG | - | chr4_2:45609216-45609235 | Msa0602180:intron | 45.0% |
| !! | GAGGGTATCCTAATCACTAG+GGG | - | chr4_2:45609217-45609236 | Msa0602180:intron | 45.0% |
| TTCATCAGCCCCTAGTGATT+AGG | + | chr4_2:45609228-45609247 | None:intergenic | 45.0% | |
| ! | TCTTGCTTAGGATTGGCAAG+AGG | - | chr4_2:45609292-45609311 | Msa0602180:intron | 45.0% |
| ! | CTTGCTTAGGATTGGCAAGA+GGG | - | chr4_2:45609293-45609312 | Msa0602180:intron | 45.0% |
| ! | TAAGGGGGGTGTATTGGATT+GGG | + | chr4_2:45609854-45609873 | None:intergenic | 45.0% |
| ! | GATTTCTAAGGGGGGTGTAT+TGG | + | chr4_2:45609860-45609879 | None:intergenic | 45.0% |
| ACACCCCCCTTAGAAATCAA+TGG | - | chr4_2:45609862-45609881 | Msa0602180:intron | 45.0% | |
| ACTAGGTGGAGTCAGATACA+TGG | + | chr4_2:45609936-45609955 | None:intergenic | 45.0% | |
| ATGTATCTGACTCCACCTAG+TGG | - | chr4_2:45609935-45609954 | Msa0602180:intron | 45.0% | |
| TGTATCTGACTCCACCTAGT+GGG | - | chr4_2:45609936-45609955 | Msa0602180:intron | 45.0% | |
| CAACCAAGATTTGTCCCACT+AGG | + | chr4_2:45609953-45609972 | None:intergenic | 45.0% | |
| GGGACAAATCTTGGTTGTTG+TGG | - | chr4_2:45609956-45609975 | Msa0602180:intron | 45.0% | |
| ! | AGCAACACAAGTTGCTTTGC+AGG | - | chr4_2:45610399-45610418 | Msa0602180:intron | 45.0% |
| CAGGCGATACAATGTTTAGG+TGG | - | chr4_2:45610418-45610437 | Msa0602180:intron | 45.0% | |
| !! | TGTTCCCCTTGGATTTTGAC+TGG | - | chr4_2:45610573-45610592 | Msa0602180:CDS | 45.0% |
| TGCAGTGCCTTACCTATTGT+TGG | - | chr4_2:45610882-45610901 | Msa0602180:five_prime_UTR | 45.0% | |
| AAGTCTTACGAACTGGGGTG+GGG | + | chr4_2:45604483-45604502 | None:intergenic | 50.0% | |
| ACCTTCATCCGAGTTCGAAC+TGG | - | chr4_2:45604536-45604555 | Msa0602180:intron | 50.0% | |
| ACCAGTTCGAACTCGGATGA+AGG | + | chr4_2:45604540-45604559 | None:intergenic | 50.0% | |
| GAGCAGCGAGAAAACTGTCA+GGG | + | chr4_2:45605040-45605059 | None:intergenic | 50.0% | |
| TGAGCAGCGAGAAAACTGTC+AGG | + | chr4_2:45605041-45605060 | None:intergenic | 50.0% | |
| GGTCTCTCACAACTTTCTCG+CGG | + | chr4_2:45605335-45605354 | None:intergenic | 50.0% | |
| TACCTGGTGCAGTAATCCCA+TGG | + | chr4_2:45605495-45605514 | None:intergenic | 50.0% | |
| CCAACATGGATGCTCACTCA+AGG | + | chr4_2:45605533-45605552 | None:intergenic | 50.0% | |
| CCTTGAGTGAGCATCCATGT+TGG | - | chr4_2:45605530-45605549 | Msa0602180:intron | 50.0% | |
| GTGAGCATCCATGTTGGTCA+TGG | - | chr4_2:45605536-45605555 | Msa0602180:intron | 50.0% | |
| ! | GAAGAGATTAGCCGAGCTTC+AGG | - | chr4_2:45606328-45606347 | Msa0602180:intron | 50.0% |
| GACCAACAGATCCTGAAGCT+CGG | + | chr4_2:45606342-45606361 | None:intergenic | 50.0% | |
| AGGTGGTTGGGTAGCTCAAT+TGG | - | chr4_2:45606676-45606695 | Msa0602180:intron | 50.0% | |
| ! | GCTTATCTCTGGGGATCATG+TGG | - | chr4_2:45606928-45606947 | Msa0602180:CDS | 50.0% |
| GCAAAAACAGACGCAACAGC+AGG | - | chr4_2:45607339-45607358 | Msa0602180:CDS | 50.0% | |
| ATCATCGAGAAGGGAATGCC+TGG | - | chr4_2:45607384-45607403 | Msa0602180:CDS | 50.0% | |
| TCATCGAGAAGGGAATGCCT+GGG | - | chr4_2:45607385-45607404 | Msa0602180:CDS | 50.0% | |
| ! | CGAGAATTGCTTTGTTCCGG+AGG | - | chr4_2:45607795-45607814 | Msa0602180:CDS | 50.0% |
| GTTCTTAGTGAGTGGCTGAG+TGG | + | chr4_2:45608271-45608290 | None:intergenic | 50.0% | |
| CTGCATAATACCAAGGGGAC+CGG | + | chr4_2:45608582-45608601 | None:intergenic | 50.0% | |
| AGCAGTTCGGTCGTCCTATT+GGG | - | chr4_2:45608642-45608661 | Msa0602180:intron | 50.0% | |
| !! | CAGATTTGAGGAGGCACCTT+TGG | + | chr4_2:45608956-45608975 | None:intergenic | 50.0% |
| TCTTACTCGTTCCATGGGAG+TGG | - | chr4_2:45609524-45609543 | Msa0602180:intron | 50.0% | |
| CTTACTCGTTCCATGGGAGT+GGG | - | chr4_2:45609525-45609544 | Msa0602180:intron | 50.0% | |
| TTACTCGTTCCATGGGAGTG+GGG | - | chr4_2:45609526-45609545 | Msa0602180:intron | 50.0% | |
| ! | ATTTTACGACCCCACTCCCA+TGG | + | chr4_2:45609538-45609557 | None:intergenic | 50.0% |
| ! | CTAAGGGGGGTGTATTGGAT+TGG | + | chr4_2:45609855-45609874 | None:intergenic | 50.0% |
| CCAAGATTTGTCCCACTAGG+TGG | + | chr4_2:45609950-45609969 | None:intergenic | 50.0% | |
| CCACCTAGTGGGACAAATCT+TGG | - | chr4_2:45609947-45609966 | Msa0602180:intron | 50.0% | |
| GATGCGAAGCTCTACGAGAT+CGG | - | chr4_2:45610484-45610503 | Msa0602180:intron | 50.0% | |
| ATGCGAAGCTCTACGAGATC+GGG | - | chr4_2:45610485-45610504 | Msa0602180:intron | 50.0% | |
| CAATGACATGCTGTTCCCCT+TGG | - | chr4_2:45610562-45610581 | Msa0602180:CDS | 50.0% | |
| CTCCATGGGATTACTGCACC+AGG | - | chr4_2:45605490-45605509 | Msa0602180:intron | 55.0% | |
| ! | GAGTATGGAGGGCTTGGTCT+AGG | - | chr4_2:45606280-45606299 | Msa0602180:intron | 55.0% |
| AGCCGAGCTTCAGGATCTGT+TGG | - | chr4_2:45606337-45606356 | Msa0602180:intron | 55.0% | |
| TGGGGATCATGTGGGAGCTT+TGG | - | chr4_2:45606937-45606956 | Msa0602180:CDS | 55.0% | |
| GACGCAACAGCAGGGTCAAA+AGG | - | chr4_2:45607348-45607367 | Msa0602180:CDS | 55.0% | |
| GAGCAGTTCGGTCGTCCTAT+TGG | - | chr4_2:45608641-45608660 | Msa0602180:intron | 55.0% | |
| GCAGTTCGGTCGTCCTATTG+GGG | - | chr4_2:45608643-45608662 | Msa0602180:intron | 55.0% | |
| GTAGCTCGGGACTGTGACAA+CGG | - | chr4_2:45608920-45608939 | Msa0602180:intron | 55.0% | |
| TGCAACCCCCTCCCAATTCT+AGG | + | chr4_2:45609363-45609382 | None:intergenic | 55.0% | |
| CGTAGAGCTTCGCATCTCTG+AGG | + | chr4_2:45610480-45610499 | None:intergenic | 55.0% | |
| TGCGAAGCTCTACGAGATCG+GGG | - | chr4_2:45610486-45610505 | Msa0602180:intron | 55.0% | |
| TTGACTGGAACTGAGCGCCT+CGG | - | chr4_2:45610588-45610607 | Msa0602180:CDS | 55.0% | |
| ! | GCAGAGGAGTATGGAGGGCT+TGG | - | chr4_2:45606274-45606293 | Msa0602180:intron | 60.0% |
| !! | GTTTTAGCAGCCGGTCCCCT+TGG | - | chr4_2:45608569-45608588 | Msa0602180:intron | 60.0% |
| ! | TCTCTGAGGAGACGACCGGT+TGG | + | chr4_2:45610466-45610485 | None:intergenic | 60.0% |
| ! | CGCATCTCTGAGGAGACGAC+CGG | + | chr4_2:45610470-45610489 | None:intergenic | 60.0% |
| AAGCTCTACGAGATCGGGGC+CGG | - | chr4_2:45610490-45610509 | Msa0602180:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 45603778 | 45610965 | 45603778 | ID=Msa0602180;Name=Msa0602180 |
| chr4_2 | mRNA | 45603778 | 45610965 | 45603778 | ID=Msa0602180-mRNA-1;Parent=Msa0602180;Name=Msa0602180-mRNA-1;_AED=0.11;_eAED=0.11;_QI=318|1|1|1|1|1|14|398|417 |
| chr4_2 | exon | 45603778 | 45604379 | 45603778 | ID=Msa0602180-mRNA-1:exon:10265;Parent=Msa0602180-mRNA-1 |
| chr4_2 | exon | 45605785 | 45605839 | 45605785 | ID=Msa0602180-mRNA-1:exon:10264;Parent=Msa0602180-mRNA-1 |
| chr4_2 | exon | 45605920 | 45605960 | 45605920 | ID=Msa0602180-mRNA-1:exon:10263;Parent=Msa0602180-mRNA-1 |
| chr4_2 | exon | 45606061 | 45606215 | 45606061 | ID=Msa0602180-mRNA-1:exon:10262;Parent=Msa0602180-mRNA-1 |
| chr4_2 | exon | 45606899 | 45606963 | 45606899 | ID=Msa0602180-mRNA-1:exon:10261;Parent=Msa0602180-mRNA-1 |
| chr4_2 | exon | 45607052 | 45607102 | 45607052 | ID=Msa0602180-mRNA-1:exon:10260;Parent=Msa0602180-mRNA-1 |
| chr4_2 | exon | 45607337 | 45607413 | 45607337 | ID=Msa0602180-mRNA-1:exon:10259;Parent=Msa0602180-mRNA-1 |
| chr4_2 | exon | 45607573 | 45607682 | 45607573 | ID=Msa0602180-mRNA-1:exon:10258;Parent=Msa0602180-mRNA-1 |
| chr4_2 | exon | 45607766 | 45607814 | 45607766 | ID=Msa0602180-mRNA-1:exon:10257;Parent=Msa0602180-mRNA-1 |
| chr4_2 | exon | 45608208 | 45608252 | 45608208 | ID=Msa0602180-mRNA-1:exon:10256;Parent=Msa0602180-mRNA-1 |
| chr4_2 | exon | 45608341 | 45608465 | 45608341 | ID=Msa0602180-mRNA-1:exon:10255;Parent=Msa0602180-mRNA-1 |
| chr4_2 | exon | 45609232 | 45609289 | 45609232 | ID=Msa0602180-mRNA-1:exon:10254;Parent=Msa0602180-mRNA-1 |
| chr4_2 | exon | 45609764 | 45609847 | 45609764 | ID=Msa0602180-mRNA-1:exon:10253;Parent=Msa0602180-mRNA-1 |
| chr4_2 | exon | 45610513 | 45610965 | 45610513 | ID=Msa0602180-mRNA-1:exon:10252;Parent=Msa0602180-mRNA-1 |
| chr4_2 | five_prime_UTR | 45610648 | 45610965 | 45610648 | ID=Msa0602180-mRNA-1:five_prime_utr;Parent=Msa0602180-mRNA-1 |
| chr4_2 | CDS | 45610513 | 45610647 | 45610513 | ID=Msa0602180-mRNA-1:cds;Parent=Msa0602180-mRNA-1 |
| chr4_2 | CDS | 45609764 | 45609847 | 45609764 | ID=Msa0602180-mRNA-1:cds;Parent=Msa0602180-mRNA-1 |
| chr4_2 | CDS | 45609232 | 45609289 | 45609232 | ID=Msa0602180-mRNA-1:cds;Parent=Msa0602180-mRNA-1 |
| chr4_2 | CDS | 45608341 | 45608465 | 45608341 | ID=Msa0602180-mRNA-1:cds;Parent=Msa0602180-mRNA-1 |
| chr4_2 | CDS | 45608208 | 45608252 | 45608208 | ID=Msa0602180-mRNA-1:cds;Parent=Msa0602180-mRNA-1 |
| chr4_2 | CDS | 45607766 | 45607814 | 45607766 | ID=Msa0602180-mRNA-1:cds;Parent=Msa0602180-mRNA-1 |
| chr4_2 | CDS | 45607573 | 45607682 | 45607573 | ID=Msa0602180-mRNA-1:cds;Parent=Msa0602180-mRNA-1 |
| chr4_2 | CDS | 45607337 | 45607413 | 45607337 | ID=Msa0602180-mRNA-1:cds;Parent=Msa0602180-mRNA-1 |
| chr4_2 | CDS | 45607052 | 45607102 | 45607052 | ID=Msa0602180-mRNA-1:cds;Parent=Msa0602180-mRNA-1 |
| chr4_2 | CDS | 45606899 | 45606963 | 45606899 | ID=Msa0602180-mRNA-1:cds;Parent=Msa0602180-mRNA-1 |
| chr4_2 | CDS | 45606061 | 45606215 | 45606061 | ID=Msa0602180-mRNA-1:cds;Parent=Msa0602180-mRNA-1 |
| chr4_2 | CDS | 45605920 | 45605960 | 45605920 | ID=Msa0602180-mRNA-1:cds;Parent=Msa0602180-mRNA-1 |
| chr4_2 | CDS | 45605785 | 45605839 | 45605785 | ID=Msa0602180-mRNA-1:cds;Parent=Msa0602180-mRNA-1 |
| chr4_2 | CDS | 45604176 | 45604379 | 45604176 | ID=Msa0602180-mRNA-1:cds;Parent=Msa0602180-mRNA-1 |
| chr4_2 | three_prime_UTR | 45603778 | 45604175 | 45603778 | ID=Msa0602180-mRNA-1:three_prime_utr;Parent=Msa0602180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
