Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699110 | XP_013457393.1 | 95.382 | 693 | 12 | 2 | 1 | 676 | 1 | 690 | 0.0 | 1353 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699110 | sp|Q8H2D5|POLH_ARATH | 57.736 | 698 | 241 | 12 | 1 | 673 | 1 | 669 | 0.0 | 753 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699110 | A0A072UNP3 | 95.382 | 693 | 12 | 2 | 1 | 676 | 1 | 690 | 0.0 | 1353 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0020930 | Msa0699110 | 0.800838 | 1.194231e-48 | -8.615850e-47 |
| Msa0036140 | Msa0699110 | 0.808822 | 2.564066e-50 | -8.615850e-47 |
| Msa0084080 | Msa0699110 | 0.805287 | 1.435982e-49 | -8.615850e-47 |
| Msa0086760 | Msa0699110 | 0.805489 | 1.302396e-49 | -8.615850e-47 |
| Msa0114060 | Msa0699110 | 0.821779 | 3.366996e-53 | -8.615850e-47 |
| Msa0699110 | Msa0947660 | 0.802150 | 6.431681e-49 | -8.615850e-47 |
| Msa0699110 | Msa1225130 | 0.801346 | 9.403862e-49 | -8.615850e-47 |
| Msa0159930 | Msa0699110 | 0.810602 | 1.062438e-50 | -8.615850e-47 |
| Msa0180500 | Msa0699110 | 0.803604 | 3.220053e-49 | -8.615850e-47 |
| Msa0440750 | Msa0699110 | 0.812865 | 3.419131e-51 | -8.615850e-47 |
| Msa0516170 | Msa0699110 | 0.806445 | 8.196339e-50 | -8.615850e-47 |
| Msa0602460 | Msa0699110 | 0.818286 | 2.121363e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699110 | MtrunA17_Chr4g0052811 | 95.382 | 693 | 12 | 2 | 1 | 676 | 1 | 690 | 0.0 | 1353 |
| Msa0699110 | MtrunA17_Chr5g0393611 | 27.528 | 356 | 196 | 12 | 13 | 362 | 370 | 669 | 1.39e-23 | 106 |
| Msa0699110 | MtrunA17_Chr5g0393781 | 26.686 | 341 | 187 | 11 | 12 | 346 | 98 | 381 | 1.66e-19 | 93.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699110 | AT5G44740.2 | 57.736 | 698 | 241 | 12 | 1 | 673 | 1 | 669 | 0.0 | 753 |
| Msa0699110 | AT5G44740.3 | 54.992 | 631 | 230 | 12 | 68 | 673 | 1 | 602 | 0.0 | 636 |
| Msa0699110 | AT5G44740.1 | 52.941 | 595 | 226 | 12 | 104 | 673 | 20 | 585 | 0.0 | 568 |
| Msa0699110 | AT5G44750.2 | 29.444 | 360 | 197 | 11 | 14 | 367 | 375 | 683 | 6.27e-25 | 111 |
| Msa0699110 | AT5G44750.1 | 29.444 | 360 | 193 | 11 | 14 | 367 | 375 | 679 | 1.62e-24 | 110 |
| Msa0699110 | AT1G49980.3 | 27.907 | 344 | 179 | 11 | 12 | 346 | 103 | 386 | 3.25e-21 | 99.0 |
| Msa0699110 | AT1G49980.2 | 27.907 | 344 | 179 | 11 | 12 | 346 | 103 | 386 | 3.25e-21 | 99.0 |
| Msa0699110 | AT1G49980.1 | 27.907 | 344 | 179 | 11 | 12 | 346 | 103 | 386 | 4.13e-21 | 98.6 |
| Msa0699110 | AT1G49980.4 | 27.907 | 344 | 179 | 11 | 12 | 346 | 103 | 386 | 4.41e-21 | 98.6 |
| Msa0699110 | AT1G49980.5 | 27.907 | 344 | 179 | 11 | 12 | 346 | 103 | 386 | 4.41e-21 | 98.6 |
| Msa0699110 | AT1G49980.7 | 27.907 | 344 | 179 | 11 | 12 | 346 | 103 | 386 | 4.41e-21 | 98.6 |
| Msa0699110 | AT1G49980.8 | 27.907 | 344 | 179 | 11 | 12 | 346 | 103 | 386 | 4.41e-21 | 98.6 |
Find 152 sgRNAs with CRISPR-Local
Find 788 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAACATGTTCCACGCTTTC+AGG | 0.161323 | 4_4:-69704406 | None:intergenic |
| CGAAACTCGTCCTGAATTTC+TGG | 0.177322 | 4_4:-69715072 | None:intergenic |
| AGAGGAAGCAACCAAGTTTA+AGG | 0.221168 | 4_4:+69703887 | Msa0699110:CDS |
| TGCTGCTCAAACAATGTTAA+TGG | 0.232370 | 4_4:+69704375 | Msa0699110:CDS |
| AAGTTAGGAAGTGGATTTGT+AGG | 0.237946 | 4_4:+69705605 | Msa0699110:CDS |
| AAATCTTGTCCTTTAAGATA+TGG | 0.238114 | 4_4:+69707293 | Msa0699110:CDS |
| AGTTCTCAAGTCACATGTTT+TGG | 0.238366 | 4_4:+69704435 | Msa0699110:CDS |
| CTAGTATTACTCAATATTTC+CGG | 0.245653 | 4_4:+69715142 | Msa0699110:CDS |
| CAACGTTATGGGATCAATAC+TGG | 0.259543 | 4_4:+69706313 | Msa0699110:CDS |
| CTAACGGCAGTGAAAATAAA+TGG | 0.269737 | 4_4:+69707396 | Msa0699110:CDS |
| TTCACTCCTGTGTCTTCTTC+AGG | 0.283118 | 4_4:-69708012 | None:intergenic |
| TTTGTAGTCCCATATCTTAA+AGG | 0.296103 | 4_4:-69707302 | None:intergenic |
| CATTCGAGTTGTAATTCATT+AGG | 0.305762 | 4_4:-69707988 | None:intergenic |
| TGTTGATCTAGACACGCTTT+TGG | 0.312822 | 4_4:-69708039 | None:intergenic |
| TTTGCAGGTAAATCTCTATA+TGG | 0.313058 | 4_4:-69713673 | None:intergenic |
| CTTAAAGGACAAGATTTAGA+AGG | 0.316078 | 4_4:-69707287 | None:intergenic |
| CAGATTTGTGATTGGCAACT+TGG | 0.323395 | 4_4:+69715236 | Msa0699110:three_prime_UTR |
| AGTCATTGCTCACGTTGATA+TGG | 0.325646 | 4_4:+69703749 | Msa0699110:CDS |
| TGAATTACCACCAGAAATTC+AGG | 0.328350 | 4_4:+69715062 | Msa0699110:CDS |
| TCTGCATGCTAGAGCATATA+AGG | 0.354360 | 4_4:+69707092 | Msa0699110:CDS |
| GTTGCACCCTCGTCACCTTC+AGG | 0.357433 | 4_4:+69707848 | Msa0699110:CDS |
| CTTCTCAACTGCTTTCAAAC+TGG | 0.360138 | 4_4:-69713722 | None:intergenic |
| TCAACATTGGCTTAATGAAC+TGG | 0.361658 | 4_4:+69707002 | Msa0699110:CDS |
| AATCAAGCCACCGCCTTTGT+AGG | 0.365717 | 4_4:-69703941 | None:intergenic |
| TGCTTTCAAACTGGAAGTAT+TGG | 0.369390 | 4_4:-69713713 | None:intergenic |
| CTTCCCAAGAGCCATGGTTC+TGG | 0.370821 | 4_4:+69706663 | Msa0699110:CDS |
| CAACTTGGTTTAGATTTGTA+TGG | 0.374449 | 4_4:+69715251 | Msa0699110:three_prime_UTR |
| ATCCAGATTGAAATAGAGTT+AGG | 0.378895 | 4_4:-69707340 | None:intergenic |
| AGCAGGTAGTGAAAATTGTT+TGG | 0.383668 | 4_4:+69707957 | Msa0699110:intron |
| AATCTTGTCCTTTAAGATAT+GGG | 0.384366 | 4_4:+69707294 | Msa0699110:CDS |
| TCGACCCTTGCGCGAAAGAA+TGG | 0.386927 | 4_4:-69704308 | None:intergenic |
| ATGGATTGCTTCTACGTTCA+AGG | 0.391815 | 4_4:+69703768 | Msa0699110:CDS |
| AGCTATGAAGCTCGCAAATC+TGG | 0.392570 | 4_4:+69703970 | Msa0699110:CDS |
| AGTCAAGCCATCTACTTTCT+CGG | 0.394227 | 4_4:-69713505 | None:intergenic |
| GCCCTAACTCTATTTCAATC+TGG | 0.399449 | 4_4:+69707338 | Msa0699110:CDS |
| CTTGAACCAATTGAATTTGC+GGG | 0.399558 | 4_4:-69704125 | None:intergenic |
| GTCTTCAAAGCTTGAGGCCC+AGG | 0.409170 | 4_4:-69706696 | None:intergenic |
| ATGATGCTAAAGAAGAAGTT+AGG | 0.411696 | 4_4:+69705590 | Msa0699110:CDS |
| TAAAACTTGCATCCTGAGTT+CGG | 0.414673 | 4_4:-69705680 | None:intergenic |
| GAGAAGCTACAACAACGTTA+TGG | 0.417449 | 4_4:+69706301 | Msa0699110:CDS |
| GGCACAACTGTTTGTTGTGC+AGG | 0.421149 | 4_4:-69705906 | None:intergenic |
| GAACCTCGTTTAACCACATT+AGG | 0.427681 | 4_4:-69715120 | None:intergenic |
| ACTTCCTTACAAAGTGATCT+TGG | 0.434353 | 4_4:+69706241 | Msa0699110:CDS |
| GATGCCAAGATCACTTTGTA+AGG | 0.435099 | 4_4:-69706245 | None:intergenic |
| ATATTTAACAGATTTGTGAT+TGG | 0.439530 | 4_4:+69715228 | Msa0699110:three_prime_UTR |
| GAGGAAGCAACCAAGTTTAA+GGG | 0.441760 | 4_4:+69703888 | Msa0699110:CDS |
| AAAAGCGTGTCTAGATCAAC+AGG | 0.442157 | 4_4:+69708041 | Msa0699110:CDS |
| TTAGCTTTACCGCGTGCTAC+AGG | 0.443323 | 4_4:-69704150 | None:intergenic |
| GAAACAGCTTGGAGGAAAGC+TGG | 0.444488 | 4_4:+69706216 | Msa0699110:CDS |
| TAACGGCAGTGAAAATAAAT+GGG | 0.445670 | 4_4:+69707397 | Msa0699110:CDS |
| AGAAGCTACAACAACGTTAT+GGG | 0.445780 | 4_4:+69706302 | Msa0699110:CDS |
| GTTCAAACTTACAGATGGTA+TGG | 0.447373 | 4_4:-69707459 | None:intergenic |
| GATAAAATTACTATCAACTT+TGG | 0.454381 | 4_4:+69715178 | Msa0699110:exon |
| TTCAGTGAGACATTTCCATA+TGG | 0.460132 | 4_4:+69707785 | Msa0699110:CDS |
| AGCCTGCCCGCAAATTCAAT+TGG | 0.464458 | 4_4:+69704119 | Msa0699110:CDS |
| AATTTATCCGAGAAAGTAGA+TGG | 0.464791 | 4_4:+69713498 | Msa0699110:CDS |
| TTTCCAGAACCATGGCTCTT+GGG | 0.469924 | 4_4:-69706666 | None:intergenic |
| GCGAGAAGAGAGAGTTGTGA+TGG | 0.473469 | 4_4:+69703723 | Msa0699110:CDS |
| CTGCATTCCTGTATGTATTG+AGG | 0.473538 | 4_4:-69704173 | None:intergenic |
| TGGTTTGATGAAGAACCATA+TGG | 0.477198 | 4_4:-69707800 | None:intergenic |
| GTAGGCAAGCCCCTTAAACT+TGG | 0.479601 | 4_4:-69703898 | None:intergenic |
| CTAAAGAAGAAGTTAGGAAG+TGG | 0.480127 | 4_4:+69705596 | Msa0699110:CDS |
| ACGAGTTTCGAACATGGCTT+AGG | 0.481725 | 4_4:+69715085 | Msa0699110:CDS |
| TGCCTCAAGGAAGCCAAGCT+TGG | 0.484187 | 4_4:+69715001 | Msa0699110:CDS |
| CCTTCATTGTTGCCGAACTC+AGG | 0.490561 | 4_4:+69705668 | Msa0699110:CDS |
| AAGAAAAGCTACTAGCTTGT+GGG | 0.491514 | 4_4:+69705644 | Msa0699110:CDS |
| TGGTAATTCATCAATGATAG+AGG | 0.493290 | 4_4:-69715049 | None:intergenic |
| TTGGTCTATTGTACATATTG+AGG | 0.501946 | 4_4:+69715197 | Msa0699110:three_prime_UTR |
| TGATTCCAGGAAATGAAGAC+AGG | 0.504393 | 4_4:+69713635 | Msa0699110:intron |
| CAATGTTATAACTCCAAGCT+TGG | 0.505340 | 4_4:-69715014 | None:intergenic |
| ACTTGAACCAATTGAATTTG+CGG | 0.506366 | 4_4:-69704126 | None:intergenic |
| CAATGACATTATCTACCGAT+TGG | 0.510895 | 4_4:-69707820 | None:intergenic |
| GCTTTCAGGAAACAGCTTGG+AGG | 0.510942 | 4_4:+69706208 | Msa0699110:intron |
| GTTTCCATTCTTTCGCGCAA+GGG | 0.511441 | 4_4:+69704304 | Msa0699110:CDS |
| GTGCCACATTCATCTGTTGA+AGG | 0.513413 | 4_4:+69705924 | Msa0699110:CDS |
| CTCAATACATACAGGAATGC+AGG | 0.515776 | 4_4:+69704174 | Msa0699110:CDS |
| CCTGAGTTCGGCAACAATGA+AGG | 0.516548 | 4_4:-69705668 | None:intergenic |
| TTGGCTTTCAGGAAACAGCT+TGG | 0.521521 | 4_4:+69706205 | Msa0699110:intron |
| TAACATTGTTTGAGCAGCAT+CGG | 0.522683 | 4_4:-69704371 | None:intergenic |
| CTCGCAAATCTGGTGTCAAA+CGG | 0.523258 | 4_4:+69703980 | Msa0699110:CDS |
| AAACAGCTTGGAGGAAAGCT+GGG | 0.523685 | 4_4:+69706217 | Msa0699110:CDS |
| ATAGAGTTAGGGCATCCTCT+TGG | 0.524492 | 4_4:-69707328 | None:intergenic |
| TGTTTCCATTCTTTCGCGCA+AGG | 0.525442 | 4_4:+69704303 | Msa0699110:CDS |
| ATCCTCCCTTGTGACTCCCC+CGG | 0.525779 | 4_4:+69713533 | Msa0699110:CDS |
| AGCATTGCAGTACTTGGCTG+TGG | 0.527570 | 4_4:+69706595 | Msa0699110:intron |
| TTAAAGGACAAGATTTAGAA+GGG | 0.529814 | 4_4:-69707286 | None:intergenic |
| ACTTGTTAAATAACTAGCAC+TGG | 0.533252 | 4_4:-69714914 | None:intergenic |
| TCCAGATTGAAATAGAGTTA+GGG | 0.534381 | 4_4:-69707339 | None:intergenic |
| TGCCACATTCATCTGTTGAA+GGG | 0.538597 | 4_4:+69705925 | Msa0699110:CDS |
| CAAGTTGAGATGCCAGCTGA+GGG | 0.539617 | 4_4:+69714940 | Msa0699110:CDS |
| TTCAGGACGAGTTTCGAACA+TGG | 0.543193 | 4_4:+69715079 | Msa0699110:CDS |
| CTGACATGGATCAAAACAAA+CGG | 0.546133 | 4_4:+69707052 | Msa0699110:CDS |
| CAACATTGGCTTAATGAACT+GGG | 0.546144 | 4_4:+69707003 | Msa0699110:CDS |
| TGGTTCTTCATCAAACCAAT+CGG | 0.546708 | 4_4:+69707805 | Msa0699110:CDS |
| AACCAATTGAATTTGCGGGC+AGG | 0.547436 | 4_4:-69704121 | None:intergenic |
| AATCAGCGGAGAAGAAGTTG+AGG | 0.548506 | 4_4:+69706632 | Msa0699110:CDS |
| TTTATCTACTTCTAGCAGGC+CGG | 0.550005 | 4_4:-69715161 | None:intergenic |
| AAGCTAACCTCAATACATAC+AGG | 0.551066 | 4_4:+69704166 | Msa0699110:CDS |
| AGTTGAGATGCCAGCTGAGG+GGG | 0.556233 | 4_4:+69714942 | Msa0699110:CDS |
| CAAGAAAAGCTACTAGCTTG+TGG | 0.558456 | 4_4:+69705643 | Msa0699110:CDS |
| AACGTTATGGGATCAATACT+GGG | 0.560625 | 4_4:+69706314 | Msa0699110:CDS |
| TGAAAGCGTGGAACATGTTG+AGG | 0.566017 | 4_4:+69704408 | Msa0699110:CDS |
| GCGATTGTCTTCAAAGCTTG+AGG | 0.571750 | 4_4:-69706702 | None:intergenic |
| TTCAAACTTACAGATGGTAT+GGG | 0.579618 | 4_4:-69707458 | None:intergenic |
| TTTGATCCATGTCAGAGTCA+AGG | 0.580710 | 4_4:-69707044 | None:intergenic |
| AAGAATGTTACAAATGCTCA+AGG | 0.584491 | 4_4:+69714775 | Msa0699110:CDS |
| ATCAGCGGAGAAGAAGTTGA+GGG | 0.589659 | 4_4:+69706633 | Msa0699110:CDS |
| TAGCTTTACCGCGTGCTACA+GGG | 0.589812 | 4_4:-69704149 | None:intergenic |
| GTTCAGTACAACTCCTACAA+AGG | 0.590603 | 4_4:+69703928 | Msa0699110:CDS |
| AGGAAGCAACCAAGTTTAAG+GGG | 0.598039 | 4_4:+69703889 | Msa0699110:CDS |
| GCCTCGTAAGCGGCCTAATG+TGG | 0.599563 | 4_4:+69715107 | Msa0699110:CDS |
| TTGTACTGAACAACTGCAGT+AGG | 0.601929 | 4_4:-69703916 | None:intergenic |
| TACAACTCCTACAAAGGCGG+TGG | 0.603301 | 4_4:+69703934 | Msa0699110:CDS |
| GGTAATTCATCAATGATAGA+GGG | 0.607506 | 4_4:-69715048 | None:intergenic |
| CGACTACTTCCCAAGAGCCA+TGG | 0.611151 | 4_4:+69706657 | Msa0699110:CDS |
| AATGCGTGGCGATGAAGCAA+AGG | 0.613750 | 4_4:+69704095 | Msa0699110:CDS |
| GGAAACTCCTCCTGAAAGCG+TGG | 0.613918 | 4_4:+69704396 | Msa0699110:CDS |
| TGAACGCCTTGACTCTGACA+TGG | 0.615794 | 4_4:+69707038 | Msa0699110:CDS |
| TCCAGGAAATGAAGACAGGA+TGG | 0.616784 | 4_4:+69713639 | Msa0699110:intron |
| ATACAGGAATGCAGGTTCAG+AGG | 0.618464 | 4_4:+69704182 | Msa0699110:CDS |
| AGCGTAGATAATATGCCTCA+AGG | 0.618979 | 4_4:+69714988 | Msa0699110:CDS |
| TCTAAAACCTGAAGGTGACG+AGG | 0.619107 | 4_4:-69707855 | None:intergenic |
| TCAAGTTGAGATGCCAGCTG+AGG | 0.620244 | 4_4:+69714939 | Msa0699110:CDS |
| ACATGTTCCACGCTTTCAGG+AGG | 0.622571 | 4_4:-69704403 | None:intergenic |
| CTCCAAGCTTGGCTTCCTTG+AGG | 0.623465 | 4_4:-69715003 | None:intergenic |
| ACTTGATTGCAGTGGAACAG+AGG | 0.624243 | 4_4:+69703869 | Msa0699110:intron |
| GATCTTGGCATCAACACCGT+TGG | 0.625005 | 4_4:+69706256 | Msa0699110:CDS |
| TTGTACAACTCTAAGACTAA+CGG | 0.629649 | 4_4:+69707380 | Msa0699110:CDS |
| AACTCGTCCTGAATTTCTGG+TGG | 0.634605 | 4_4:-69715069 | None:intergenic |
| CGGCCTAATGTGGTTAAACG+AGG | 0.645480 | 4_4:+69715117 | Msa0699110:CDS |
| ACATTTACATAAGATTACAA+AGG | 0.652983 | 4_4:-69715306 | None:intergenic |
| ACCACATTAGGCCGCTTACG+AGG | 0.654091 | 4_4:-69715108 | None:intergenic |
| AGAAAAGCTACTAGCTTGTG+GGG | 0.656519 | 4_4:+69705645 | Msa0699110:CDS |
| GAGAGAGAGAGGTATGCGGG+TGG | 0.657926 | 4_4:+69703701 | Msa0699110:exon |
| CTAAAACCTGAAGGTGACGA+GGG | 0.662874 | 4_4:-69707854 | None:intergenic |
| AAACTGAAGCAGATCACCAA+CGG | 0.665670 | 4_4:-69706272 | None:intergenic |
| TTGTTTGAGCAGCATCGGTG+AGG | 0.666748 | 4_4:-69704366 | None:intergenic |
| TGAGAGAGCTTCAATTGATG+AGG | 0.669380 | 4_4:+69704333 | Msa0699110:CDS |
| AACAGCTTGGAGGAAAGCTG+GGG | 0.669741 | 4_4:+69706218 | Msa0699110:CDS |
| TCAAACTTACAGATGGTATG+GGG | 0.673402 | 4_4:-69707457 | None:intergenic |
| GGGGTTGATACAAATAACAG+TGG | 0.684049 | 4_4:+69714961 | Msa0699110:CDS |
| AACCCTTCAACAGATGAATG+TGG | 0.684076 | 4_4:-69705927 | None:intergenic |
| AACGGCAGTGAAAATAAATG+GGG | 0.684334 | 4_4:+69707398 | Msa0699110:CDS |
| GTTCAAGTCCCTGTAGCACG+CGG | 0.689011 | 4_4:+69704141 | Msa0699110:CDS |
| TCAGCGGAGAAGAAGTTGAG+GGG | 0.689369 | 4_4:+69706634 | Msa0699110:CDS |
| TGGCTGTGGAATATTGCGAG+AGG | 0.692385 | 4_4:+69706609 | Msa0699110:CDS |
| CAGTACAACTCCTACAAAGG+CGG | 0.700106 | 4_4:+69703931 | Msa0699110:CDS |
| AAGTTGAGATGCCAGCTGAG+GGG | 0.708128 | 4_4:+69714941 | Msa0699110:CDS |
| AATATTGCGAGAGGAATCAG+CGG | 0.711561 | 4_4:+69706618 | Msa0699110:CDS |
| CATGGCTTAGGCCTCGTAAG+CGG | 0.714652 | 4_4:+69715097 | Msa0699110:CDS |
| GAATGTCCTGAAGAAGACAC+AGG | 0.726806 | 4_4:+69708006 | Msa0699110:CDS |
| TGGGACTACAAAGATCCAAG+AGG | 0.730216 | 4_4:+69707313 | Msa0699110:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATTATATAATAATTT+AGG | + | chr4_4:69712360-69712379 | Msa0699110:intron | 0.0% |
| !! | ACATTAATTAAATTAAATTG+GGG | - | chr4_4:69703843-69703862 | None:intergenic | 10.0% |
| !!! | AATTTTTTTGATTTTTATGT+TGG | + | chr4_4:69706870-69706889 | Msa0699110:intron | 10.0% |
| !!! | AATTTAATTTGTGAAAATTT+TGG | + | chr4_4:69708699-69708718 | Msa0699110:intron | 10.0% |
| !!! | ATTTAATTTGTGAAAATTTT+GGG | + | chr4_4:69708700-69708719 | Msa0699110:intron | 10.0% |
| !!! | AATTTTATAAAGTATTTACT+TGG | + | chr4_4:69709561-69709580 | Msa0699110:intron | 10.0% |
| !!! | TTATTTATTGTTATTTACTT+TGG | + | chr4_4:69710292-69710311 | Msa0699110:intron | 10.0% |
| !!! | TTTTATTAAACTGATATAAA+GGG | - | chr4_4:69712051-69712070 | None:intergenic | 10.0% |
| !!! | TTTTTATTAAACTGATATAA+AGG | - | chr4_4:69712052-69712071 | None:intergenic | 10.0% |
| !!! | ATTTCACAATAAATTTATTT+TGG | + | chr4_4:69712950-69712969 | Msa0699110:intron | 10.0% |
| !!! | TTTCACAATAAATTTATTTT+GGG | + | chr4_4:69712951-69712970 | Msa0699110:intron | 10.0% |
| !! | AATGTATATGTTAAAATTAT+TGG | - | chr4_4:69714686-69714705 | None:intergenic | 10.0% |
| !!! | TTTTCTTTATTATATTTTTG+AGG | + | chr4_4:69714837-69714856 | Msa0699110:intron | 10.0% |
| !!! | TGATTGTTAATTTTAAAAGT+GGG | + | chr4_4:69704507-69704526 | Msa0699110:intron | 15.0% |
| !!! | TTAAAGTTATTTGTTTTAGT+TGG | + | chr4_4:69704542-69704561 | Msa0699110:intron | 15.0% |
| !! | ATAAAATTCAGATTTAACAT+TGG | - | chr4_4:69704656-69704675 | None:intergenic | 15.0% |
| !!! | TTATTTGTATGGTTTTTTAA+GGG | - | chr4_4:69705235-69705254 | None:intergenic | 15.0% |
| !!! | TTTATTTGTATGGTTTTTTA+AGG | - | chr4_4:69705236-69705255 | None:intergenic | 15.0% |
| !! | AAAACCATACAAATAAATAA+AGG | + | chr4_4:69705239-69705258 | Msa0699110:intron | 15.0% |
| !!! | ATAACCTTTATTTATTTGTA+TGG | - | chr4_4:69705246-69705265 | None:intergenic | 15.0% |
| !! | TTTATGAAGCATAATAAAAT+AGG | + | chr4_4:69705269-69705288 | Msa0699110:intron | 15.0% |
| !!! | ATTTAAAATGCTTTTTATTC+AGG | + | chr4_4:69705561-69705580 | Msa0699110:intron | 15.0% |
| !! | AAAAATTCATATACTGTAAA+TGG | + | chr4_4:69708117-69708136 | Msa0699110:intron | 15.0% |
| !! | TTAAAAGCTTATAAAATTCA+TGG | + | chr4_4:69708467-69708486 | Msa0699110:intron | 15.0% |
| !!! | AATTTGATTATTTTTTTGGT+TGG | + | chr4_4:69708637-69708656 | Msa0699110:intron | 15.0% |
| !!! | TTTTTTTGAGTTAGTTTAAT+CGG | - | chr4_4:69708820-69708839 | None:intergenic | 15.0% |
| !! | TAGATTTATTACATTTGATT+TGG | - | chr4_4:69709535-69709554 | Msa0699120:intron | 15.0% |
| !! | GTTAAAAATGACATTATTAT+TGG | - | chr4_4:69710116-69710135 | Msa0699120:intron | 15.0% |
| !!! | TTAAATCTTGAATTATTTTG+AGG | - | chr4_4:69710189-69710208 | Msa0699120:intron | 15.0% |
| !! | TTCATAGATATAATTAGATA+TGG | + | chr4_4:69710250-69710269 | Msa0699110:intron | 15.0% |
| !!! | CTTTTAAATTTTATTGCTTT+GGG | - | chr4_4:69711393-69711412 | None:intergenic | 15.0% |
| !!! | TCTTTTAAATTTTATTGCTT+TGG | - | chr4_4:69711394-69711413 | None:intergenic | 15.0% |
| !!! | ACTTATTTTACTTCTAATAT+AGG | - | chr4_4:69711618-69711637 | None:intergenic | 15.0% |
| !!! | AATTTTTTATGTCAATTCAA+CGG | - | chr4_4:69712348-69712367 | None:intergenic | 15.0% |
| !!! | ATATAATAATTTAGGTTACA+TGG | + | chr4_4:69712368-69712387 | Msa0699110:intron | 15.0% |
| !!! | TTGAATATAGGATAATATTT+TGG | - | chr4_4:69712581-69712600 | None:intergenic | 15.0% |
| !! | ATTGTTAACTAATATATTAG+AGG | - | chr4_4:69712645-69712664 | None:intergenic | 15.0% |
| !!! | CAAACAAATATATATAGTTT+TGG | - | chr4_4:69713905-69713924 | None:intergenic | 15.0% |
| !!! | TATTCACTCATGTTAAATTT+TGG | + | chr4_4:69704260-69704279 | Msa0699110:intron | 20.0% |
| !!! | TTGGTGATTTTGAATTTTAA+AGG | + | chr4_4:69704279-69704298 | Msa0699110:intron | 20.0% |
| !!! | GTGATTGTTAATTTTAAAAG+TGG | + | chr4_4:69704506-69704525 | Msa0699110:intron | 20.0% |
| !!! | TAAATCTGAATTTTATTGTG+TGG | + | chr4_4:69704660-69704679 | Msa0699110:intron | 20.0% |
| !! | TCACTAAATTGTTATCTATA+TGG | - | chr4_4:69704715-69704734 | None:intergenic | 20.0% |
| !!! | TTGTCTTTGTTTTTAAGATA+TGG | - | chr4_4:69704759-69704778 | None:intergenic | 20.0% |
| !! | TGATATATGACATAACATTA+TGG | - | chr4_4:69704836-69704855 | None:intergenic | 20.0% |
| !!! | TTTGAAGTTTATGAATCAAA+TGG | + | chr4_4:69706067-69706086 | Msa0699110:intron | 20.0% |
| !!! | TTTTCCTTTACAAAAAAACA+AGG | + | chr4_4:69706097-69706116 | Msa0699110:intron | 20.0% |
| !!! | GATCTTAGTAATTTTAACAT+GGG | - | chr4_4:69706146-69706165 | None:intergenic | 20.0% |
| !!! | TGATCTTAGTAATTTTAACA+TGG | - | chr4_4:69706147-69706166 | None:intergenic | 20.0% |
| !!! | TTATTTGTGTTTTAACATAG+AGG | + | chr4_4:69706340-69706359 | Msa0699110:intron | 20.0% |
| !! | CGTTTATTAATTATAGTATG+TGG | + | chr4_4:69707582-69707601 | Msa0699110:intron | 20.0% |
| !!! | TTATTTTTCTTTTATCTGTG+TGG | + | chr4_4:69707666-69707685 | Msa0699110:intron | 20.0% |
| !! | AATATCATTATGTGATCTAA+AGG | - | chr4_4:69707713-69707732 | None:intergenic | 20.0% |
| !!! | GATTTTTTGATAGGTTTTAA+TGG | + | chr4_4:69708189-69708208 | Msa0699110:intron | 20.0% |
| !! | AAATAATCAAATTGCACAAT+GGG | - | chr4_4:69708630-69708649 | None:intergenic | 20.0% |
| !! | AAAATAATCAAATTGCACAA+TGG | - | chr4_4:69708631-69708650 | None:intergenic | 20.0% |
| !!! | GTGCAATTTGATTATTTTTT+TGG | + | chr4_4:69708633-69708652 | Msa0699110:intron | 20.0% |
| !! | CTAAATTGTTTCATTAATGT+CGG | + | chr4_4:69709337-69709356 | Msa0699110:intron | 20.0% |
| !! | TTGGTTATATATTAACTATG+AGG | - | chr4_4:69709516-69709535 | Msa0699120:intron | 20.0% |
| !! | ACCATGATTTAAATGATTAA+CGG | - | chr4_4:69710013-69710032 | Msa0699120:intron | 20.0% |
| !!! | TTTATTGTTATTTACTTTGG+TGG | + | chr4_4:69710295-69710314 | Msa0699110:intron | 20.0% |
| !! | TTATAAAAAAAGGTCTCTTA+TGG | - | chr4_4:69711450-69711469 | None:intergenic | 20.0% |
| !!! | AGTGAAAGTGTTATAAAAAA+AGG | - | chr4_4:69711460-69711479 | None:intergenic | 20.0% |
| !! | TAATTTCTTTCTTGTTGAAA+GGG | - | chr4_4:69711568-69711587 | None:intergenic | 20.0% |
| !! | TTCAAGAGATTGTAAAATAA+GGG | - | chr4_4:69712240-69712259 | None:intergenic | 20.0% |
| !! | ATTCAAGAGATTGTAAAATA+AGG | - | chr4_4:69712241-69712260 | None:intergenic | 20.0% |
| !!! | TCACATTTTGCTAAAAAAAA+TGG | - | chr4_4:69712807-69712826 | None:intergenic | 20.0% |
| !!! | TATTCAAGTTGTAATTCATT+AGG | - | chr4_4:69713093-69713112 | None:intergenic | 20.0% |
| !!! | AATACCAATTTATCTTTTAC+AGG | + | chr4_4:69713464-69713483 | Msa0699110:intron | 20.0% |
| !! | AAAATTGTAACCAAATTTGA+AGG | - | chr4_4:69713835-69713854 | None:intergenic | 20.0% |
| !! | CTAATTGACATAATTGTTAT+TGG | - | chr4_4:69714005-69714024 | None:intergenic | 20.0% |
| !!! | TTTCAAACAATGTCAATTTT+TGG | - | chr4_4:69714086-69714105 | None:intergenic | 20.0% |
| !! | AAAAATTGACATTGTTTGAA+AGG | + | chr4_4:69714085-69714104 | Msa0699110:intron | 20.0% |
| !!! | TTCCATTCTTTTCATTAATA+AGG | - | chr4_4:69714571-69714590 | None:intergenic | 20.0% |
| !!! | TTAATGCTGTTTTGATTAAA+GGG | - | chr4_4:69714626-69714645 | None:intergenic | 20.0% |
| !! | TAGGAATAAGAAATAGTTAA+GGG | - | chr4_4:69714864-69714883 | None:intergenic | 20.0% |
| !! | TTAGGAATAAGAAATAGTTA+AGG | - | chr4_4:69714865-69714884 | None:intergenic | 20.0% |
| !! | GATAAAATTACTATCAACTT+TGG | + | chr4_4:69715178-69715197 | Msa0699110:exon | 20.0% |
| !! | ATATTTAACAGATTTGTGAT+TGG | + | chr4_4:69715228-69715247 | Msa0699110:three_prime_UTR | 20.0% |
| !! | ACATTTACATAAGATTACAA+AGG | - | chr4_4:69715309-69715328 | None:intergenic | 20.0% |
| ! | ATTTGAATTGAGGATCAAAA+TGG | - | chr4_4:69704022-69704041 | None:intergenic | 25.0% |
| !!! | TTGTTAATTTTAAAAGTGGG+TGG | + | chr4_4:69704510-69704529 | Msa0699110:intron | 25.0% |
| !!! | TGTTAATTTTAAAAGTGGGT+GGG | + | chr4_4:69704511-69704530 | Msa0699110:intron | 25.0% |
| !!! | AAGTTATTTGTTTTAGTTGG+CGG | + | chr4_4:69704545-69704564 | Msa0699110:intron | 25.0% |
| ! | TAACAATTTAGTGAAAGCTT+AGG | + | chr4_4:69704721-69704740 | Msa0699110:intron | 25.0% |
| !!! | ATTTTTGAATAAAGAGCATG+TGG | + | chr4_4:69705534-69705553 | Msa0699110:intron | 25.0% |
| !!! | AAAATGCTTTTTATTCAGGA+TGG | + | chr4_4:69705565-69705584 | Msa0699110:intron | 25.0% |
| ! | GCACTAATGTTATTATTGAA+AGG | + | chr4_4:69705982-69706001 | Msa0699110:intron | 25.0% |
| !!! | ACAACCTTGTTTTTTTGTAA+AGG | - | chr4_4:69706104-69706123 | None:intergenic | 25.0% |
| ! | AAATATTGTCATCCTAGTTA+AGG | - | chr4_4:69706461-69706480 | None:intergenic | 25.0% |
| ! | AATGCTGTAAAAGTTAAAAC+AGG | - | chr4_4:69706581-69706600 | None:intergenic | 25.0% |
| !!! | AAACTTCTAGCACTTTATTT+TGG | + | chr4_4:69706755-69706774 | Msa0699110:intron | 25.0% |
| !!! | GTTTTGTTGATTAAGATTCA+AGG | + | chr4_4:69706894-69706913 | Msa0699110:intron | 25.0% |
| ! | TTGATTAAGATTCAAGGATT+GGG | + | chr4_4:69706900-69706919 | Msa0699110:intron | 25.0% |
| !!! | TTCATTTTTTTCTTGCAGAA+AGG | + | chr4_4:69707239-69707258 | Msa0699110:intron | 25.0% |
| !!! | TCATTTTTTTCTTGCAGAAA+GGG | + | chr4_4:69707240-69707259 | Msa0699110:intron | 25.0% |
| ! | TTAAAGGACAAGATTTAGAA+GGG | - | chr4_4:69707289-69707308 | None:intergenic | 25.0% |
| !!! | AAATCTTGTCCTTTAAGATA+TGG | + | chr4_4:69707293-69707312 | Msa0699110:CDS | 25.0% |
| !!! | AATCTTGTCCTTTAAGATAT+GGG | + | chr4_4:69707294-69707313 | Msa0699110:CDS | 25.0% |
| ! | ATTGAACTTCATTTGTATCT+AGG | + | chr4_4:69707739-69707758 | Msa0699110:intron | 25.0% |
| ! | TTGAACTTCATTTGTATCTA+GGG | + | chr4_4:69707740-69707759 | Msa0699110:intron | 25.0% |
| ! | TAGATCAACAGGTATATTAA+TGG | + | chr4_4:69708052-69708071 | Msa0699110:intron | 25.0% |
| ! | ATAACAGAATTTCTCTTACA+CGG | - | chr4_4:69708387-69708406 | None:intergenic | 25.0% |
| ! | GAAATTCAACAGAATTTGAA+GGG | + | chr4_4:69708489-69708508 | Msa0699110:intron | 25.0% |
| !!! | AATTTGTGAAAATTTTGGGT+AGG | + | chr4_4:69708704-69708723 | Msa0699110:intron | 25.0% |
| !!! | GTTTTGACTTTTATGTATGA+TGG | + | chr4_4:69708741-69708760 | Msa0699110:intron | 25.0% |
| !!! | ATGTATTTGCTATTATAGAG+AGG | + | chr4_4:69708858-69708877 | Msa0699110:intron | 25.0% |
| !!! | TGTATTTGCTATTATAGAGA+GGG | + | chr4_4:69708859-69708878 | Msa0699110:intron | 25.0% |
| ! | ATATTTCATTGACATGAAGT+TGG | - | chr4_4:69708903-69708922 | None:intergenic | 25.0% |
| ! | TTATTTGCCAAAACATGAAA+AGG | + | chr4_4:69708980-69708999 | Msa0699110:intron | 25.0% |
| !! | TACTTTACCTTTTCATGTTT+TGG | - | chr4_4:69708990-69709009 | None:intergenic | 25.0% |
| ! | AAAAAAGAGCAAGCTTATAA+AGG | + | chr4_4:69709093-69709112 | Msa0699110:intron | 25.0% |
| !!! | TTCTTTTTTATGGTACTTTG+TGG | - | chr4_4:69709225-69709244 | None:intergenic | 25.0% |
| !!! | CTTTGTGTCTTTCTTTTTTA+TGG | - | chr4_4:69709235-69709254 | None:intergenic | 25.0% |
| ! | GTTATAGTGATACTTTCATA+GGG | - | chr4_4:69709298-69709317 | None:intergenic | 25.0% |
| ! | AGTTATAGTGATACTTTCAT+AGG | - | chr4_4:69709299-69709318 | None:intergenic | 25.0% |
| ! | CCATGATTTAAATGATTAAC+GGG | - | chr4_4:69710012-69710031 | Msa0699120:intron | 25.0% |
| ! | TTATTTACTTTGGTGGAATT+TGG | + | chr4_4:69710302-69710321 | Msa0699110:intron | 25.0% |
| ! | TATTTACTTTGGTGGAATTT+GGG | + | chr4_4:69710303-69710322 | Msa0699110:intron | 25.0% |
| !! | AAAATCTTGGTTTGAACATA+GGG | - | chr4_4:69710964-69710983 | Msa0699120:CDS | 25.0% |
| ! | TGCATATTTAACTATCACAA+AGG | + | chr4_4:69711347-69711366 | Msa0699110:intron | 25.0% |
| ! | ACTGATTAAAACTATATCTG+AGG | + | chr4_4:69711477-69711496 | Msa0699110:intron | 25.0% |
| ! | TGATCATTTGAATCATGTTA+TGG | + | chr4_4:69711502-69711521 | Msa0699110:intron | 25.0% |
| ! | GTAATTTCTTTCTTGTTGAA+AGG | - | chr4_4:69711569-69711588 | None:intergenic | 25.0% |
| ! | GCTTATAATCTGTTAGAAAT+AGG | + | chr4_4:69711822-69711841 | Msa0699110:intron | 25.0% |
| ! | TAATCTGTTAGAAATAGGAT+AGG | + | chr4_4:69711827-69711846 | Msa0699110:intron | 25.0% |
| !! | TGAAAAGATTGTTCTGTTTT+TGG | + | chr4_4:69711865-69711884 | Msa0699110:intron | 25.0% |
| !!! | GAAAAGATTGTTCTGTTTTT+GGG | + | chr4_4:69711866-69711885 | Msa0699110:intron | 25.0% |
| !!! | AAAAGATTGTTCTGTTTTTG+GGG | + | chr4_4:69711867-69711886 | Msa0699110:intron | 25.0% |
| !! | AGTCATATTTGTTTCTTCTT+GGG | + | chr4_4:69711934-69711953 | Msa0699110:intron | 25.0% |
| ! | TTAAACTGATATAAAGGGTT+TGG | - | chr4_4:69712046-69712065 | None:intergenic | 25.0% |
| ! | AAAAAGACTAACACTTAATC+CGG | - | chr4_4:69712436-69712455 | None:intergenic | 25.0% |
| ! | TCCTATATTCAATACATTTG+AGG | + | chr4_4:69712589-69712608 | Msa0699110:intron | 25.0% |
| ! | AAATTTGGGTGTAATAATTG+CGG | - | chr4_4:69712709-69712728 | None:intergenic | 25.0% |
| ! | AAAAGAGTAAGTCGAAATTT+GGG | - | chr4_4:69712723-69712742 | None:intergenic | 25.0% |
| ! | AAAAAGAGTAAGTCGAAATT+TGG | - | chr4_4:69712724-69712743 | None:intergenic | 25.0% |
| ! | CCAGTCTTAAATCTTTAATT+TGG | - | chr4_4:69712873-69712892 | None:intergenic | 25.0% |
| !! | CCAAATTAAAGATTTAAGAC+TGG | + | chr4_4:69712870-69712889 | Msa0699110:intron | 25.0% |
| !!! | GTTTTAAATATCAGCAATGT+AGG | + | chr4_4:69712916-69712935 | Msa0699110:intron | 25.0% |
| ! | CTTTCTTAACTAATGTCATT+AGG | - | chr4_4:69712985-69713004 | None:intergenic | 25.0% |
| !! | CCAATACAAAACTTCTATTT+TGG | - | chr4_4:69713008-69713027 | None:intergenic | 25.0% |
| !!! | CCAAAATAGAAGTTTTGTAT+TGG | + | chr4_4:69713005-69713024 | Msa0699110:intron | 25.0% |
| !!! | TAGATCAACAGGTATTTTAA+CGG | + | chr4_4:69713154-69713173 | Msa0699110:intron | 25.0% |
| !!! | AAGGTTTTAATGTCTAATGT+TGG | + | chr4_4:69713301-69713320 | Msa0699110:intron | 25.0% |
| !!! | AGGTTTTAATGTCTAATGTT+GGG | + | chr4_4:69713302-69713321 | Msa0699110:intron | 25.0% |
| ! | ACTACTTCTATATTCATACA+AGG | - | chr4_4:69713366-69713385 | None:intergenic | 25.0% |
| ! | AGATCCTGTAAAAGATAAAT+TGG | - | chr4_4:69713471-69713490 | None:intergenic | 25.0% |
| ! | AGTGTAAAAACCTTCAAATT+TGG | + | chr4_4:69713822-69713841 | Msa0699110:intron | 25.0% |
| !! | ATTTGGTTACAATTTTGCAA+AGG | + | chr4_4:69713839-69713858 | Msa0699110:intron | 25.0% |
| !!! | ATATAGTTTTGGTAAAGCAA+CGG | - | chr4_4:69713894-69713913 | None:intergenic | 25.0% |
| !! | TGACATAATTGTTATTGGAT+TGG | - | chr4_4:69714000-69714019 | None:intergenic | 25.0% |
| !!! | AATTAGTCTAACACTTTTCT+TGG | + | chr4_4:69714019-69714038 | Msa0699110:intron | 25.0% |
| ! | AGACATGCTATAATGATATA+TGG | + | chr4_4:69714299-69714318 | Msa0699110:intron | 25.0% |
| !!! | AGCCTTATTAATGAAAAGAA+TGG | + | chr4_4:69714566-69714585 | Msa0699110:intron | 25.0% |
| !!! | TAATGCTGTTTTGATTAAAG+GGG | - | chr4_4:69714625-69714644 | None:intergenic | 25.0% |
| !!! | GTTAATGCTGTTTTGATTAA+AGG | - | chr4_4:69714627-69714646 | None:intergenic | 25.0% |
| !!! | ATACATTTTTTTTGTGTGAC+AGG | + | chr4_4:69714699-69714718 | Msa0699110:intron | 25.0% |
| !!! | TACATTTTTTTTGTGTGACA+GGG | + | chr4_4:69714700-69714719 | Msa0699110:intron | 25.0% |
| ! | AGGAATAAGAAATAGTTAAG+GGG | - | chr4_4:69714863-69714882 | None:intergenic | 25.0% |
| ! | CTAGTATTACTCAATATTTC+CGG | + | chr4_4:69715142-69715161 | Msa0699110:CDS | 25.0% |
| !! | TAATTTTATCTACTTCTAGC+AGG | - | chr4_4:69715168-69715187 | None:intergenic | 25.0% |
| TCAAAATGGTTGTATCGAAT+AGG | - | chr4_4:69704008-69704027 | None:intergenic | 30.0% | |
| CTAAACACACATTTGAATTG+AGG | - | chr4_4:69704032-69704051 | None:intergenic | 30.0% | |
| ACTTGAACCAATTGAATTTG+CGG | - | chr4_4:69704129-69704148 | None:intergenic | 30.0% | |
| !! | GAGGTATTTCTTTTATCATC+AGG | + | chr4_4:69704201-69704220 | Msa0699110:intron | 30.0% |
| ATGAAAAATTGAATGCCTCA+TGG | + | chr4_4:69704617-69704636 | Msa0699110:intron | 30.0% | |
| ! | GACTTGTAGATTTTGTAGTA+TGG | - | chr4_4:69704974-69704993 | None:intergenic | 30.0% |
| ! | TAGAAAATATGGTGGAAACT+CGG | - | chr4_4:69705025-69705044 | None:intergenic | 30.0% |
| ! | TCCACCATATTTTCTATGAT+CGG | + | chr4_4:69705029-69705048 | Msa0699110:intron | 30.0% |
| CAATATTACAGAGAGAATCT+GGG | - | chr4_4:69705060-69705079 | None:intergenic | 30.0% | |
| ACAATATTACAGAGAGAATC+TGG | - | chr4_4:69705061-69705080 | None:intergenic | 30.0% | |
| !!! | CGCTTATTTTATTCTTGTGT+TGG | + | chr4_4:69705143-69705162 | Msa0699110:intron | 30.0% |
| ! | TCTTTTGCCAAACAAATTCA+TGG | + | chr4_4:69705478-69705497 | Msa0699110:intron | 30.0% |
| ! | CTTTTGCCAAACAAATTCAT+GGG | + | chr4_4:69705479-69705498 | Msa0699110:intron | 30.0% |
| ! | TTTTGCCAAACAAATTCATG+GGG | + | chr4_4:69705480-69705499 | Msa0699110:intron | 30.0% |
| ATGATGCTAAAGAAGAAGTT+AGG | + | chr4_4:69705590-69705609 | Msa0699110:CDS | 30.0% | |
| !! | AAGGTGTTGTAAGAAATTTG+GGG | - | chr4_4:69705784-69705803 | None:intergenic | 30.0% |
| !! | GAAGGTGTTGTAAGAAATTT+GGG | - | chr4_4:69705785-69705804 | None:intergenic | 30.0% |
| CTACAACTTTACAAACATCA+AGG | - | chr4_4:69705820-69705839 | None:intergenic | 30.0% | |
| TGATGTTTGTAAAGTTGTAG+TGG | + | chr4_4:69705820-69705839 | Msa0699110:intron | 30.0% | |
| ! | GTGCGTTACATTTTCTTTAT+CGG | - | chr4_4:69705966-69705985 | None:intergenic | 30.0% |
| ! | TTCAAAAGAAAGTACATTCG+AGG | - | chr4_4:69706053-69706072 | None:intergenic | 30.0% |
| GTGTGATATTGAAGAAAACT+TGG | + | chr4_4:69706186-69706205 | Msa0699110:intron | 30.0% | |
| TAACATAGAGGAACATAGTT+TGG | + | chr4_4:69706352-69706371 | Msa0699110:intron | 30.0% | |
| GAGATCGCAAAAATAAAATC+AGG | - | chr4_4:69706386-69706405 | None:intergenic | 30.0% | |
| ATGCATGCATATTTACGAAT+TGG | - | chr4_4:69706492-69706511 | None:intergenic | 30.0% | |
| GTTGATTAAGATTCAAGGAT+TGG | + | chr4_4:69706899-69706918 | Msa0699110:intron | 30.0% | |
| !!! | ACATCTAGTTTTTTTCCTTC+AGG | + | chr4_4:69706978-69706997 | Msa0699110:intron | 30.0% |
| TCACTCAAAGATAGTGAAAA+TGG | - | chr4_4:69707169-69707188 | None:intergenic | 30.0% | |
| !!! | CATTTTTTTCTTGCAGAAAG+GGG | + | chr4_4:69707241-69707260 | Msa0699110:intron | 30.0% |
| CTTAAAGGACAAGATTTAGA+AGG | - | chr4_4:69707290-69707309 | None:intergenic | 30.0% | |
| TTTGTAGTCCCATATCTTAA+AGG | - | chr4_4:69707305-69707324 | None:intergenic | 30.0% | |
| TCCAGATTGAAATAGAGTTA+GGG | - | chr4_4:69707342-69707361 | None:intergenic | 30.0% | |
| ATCCAGATTGAAATAGAGTT+AGG | - | chr4_4:69707343-69707362 | None:intergenic | 30.0% | |
| !!! | ATCTGGATTACGTGATTTTT+TGG | + | chr4_4:69707355-69707374 | Msa0699110:CDS | 30.0% |
| !!! | TCTGGATTACGTGATTTTTT+GGG | + | chr4_4:69707356-69707375 | Msa0699110:CDS | 30.0% |
| !! | TTGTACAACTCTAAGACTAA+CGG | + | chr4_4:69707380-69707399 | Msa0699110:CDS | 30.0% |
| TAACGGCAGTGAAAATAAAT+GGG | + | chr4_4:69707397-69707416 | Msa0699110:CDS | 30.0% | |
| TTCAAACTTACAGATGGTAT+GGG | - | chr4_4:69707461-69707480 | None:intergenic | 30.0% | |
| TTGGATTACTAACTTGATTG+TGG | + | chr4_4:69707485-69707504 | Msa0699110:intron | 30.0% | |
| CAAACACATAGCTTAGAATA+CGG | - | chr4_4:69707641-69707660 | None:intergenic | 30.0% | |
| TGAACTTCATTTGTATCTAG+GGG | + | chr4_4:69707741-69707760 | Msa0699110:intron | 30.0% | |
| ATTCCACTGTAATTTGATTG+AGG | + | chr4_4:69707923-69707942 | Msa0699110:intron | 30.0% | |
| !! | CATTCGAGTTGTAATTCATT+AGG | - | chr4_4:69707991-69708010 | None:intergenic | 30.0% |
| ! | GGTTTTTACAATCATGATGA+TGG | + | chr4_4:69708138-69708157 | Msa0699110:intron | 30.0% |
| !!! | AGGTGGATAGATTTTTTGAT+AGG | + | chr4_4:69708180-69708199 | Msa0699110:intron | 30.0% |
| !! | TAGGTTTTAATGGCTTATAC+TGG | + | chr4_4:69708199-69708218 | Msa0699110:intron | 30.0% |
| !! | AGGTTTTAATGGCTTATACT+GGG | + | chr4_4:69708200-69708219 | Msa0699110:intron | 30.0% |
| CTTAAAAAGACATTAGCACT+TGG | + | chr4_4:69708259-69708278 | Msa0699110:intron | 30.0% | |
| TATGTTAAGAGAAATGCAGA+AGG | + | chr4_4:69708305-69708324 | Msa0699110:intron | 30.0% | |
| ATGTTAAGAGAAATGCAGAA+GGG | + | chr4_4:69708306-69708325 | Msa0699110:intron | 30.0% | |
| GGAAATTCAACAGAATTTGA+AGG | + | chr4_4:69708488-69708507 | Msa0699110:intron | 30.0% | |
| !! | TTTTATGTATGATGGAACGA+AGG | + | chr4_4:69708749-69708768 | Msa0699110:intron | 30.0% |
| !! | GTATTTGCTATTATAGAGAG+GGG | + | chr4_4:69708860-69708879 | Msa0699110:intron | 30.0% |
| TGAAATATCTCTCAGAGAAA+TGG | + | chr4_4:69708915-69708934 | Msa0699110:intron | 30.0% | |
| CGGCAATATTTGTAATTTCA+AGG | + | chr4_4:69708941-69708960 | Msa0699110:intron | 30.0% | |
| !! | TACTTTAGTTTAGCTTTAGC+AGG | - | chr4_4:69709054-69709073 | None:intergenic | 30.0% |
| AATGTCGGTACTAATTAATC+TGG | + | chr4_4:69709352-69709371 | Msa0699110:intron | 30.0% | |
| CCCGTTAATCATTTAAATCA+TGG | + | chr4_4:69710009-69710028 | Msa0699110:intron | 30.0% | |
| ! | TTGTTATGTCACTTGTAGTT+TGG | - | chr4_4:69710138-69710157 | Msa0699120:intron | 30.0% |
| ATCTAATGACAAAAGCAAAG+TGG | + | chr4_4:69710216-69710235 | Msa0699110:intron | 30.0% | |
| TTTGTTTATGGTTGTGTAGT+TGG | + | chr4_4:69710828-69710847 | Msa0699110:intron | 30.0% | |
| ! | CAACAACATGGATAACATTT+TGG | - | chr4_4:69710930-69710949 | Msa0699120:CDS | 30.0% |
| ! | CAAAATCTTGGTTTGAACAT+AGG | - | chr4_4:69710965-69710984 | Msa0699120:CDS | 30.0% |
| AACATTGCACAACAAAATCT+TGG | - | chr4_4:69710977-69710996 | Msa0699120:CDS | 30.0% | |
| AGTGAATCCATTTGTATAAG+TGG | + | chr4_4:69711009-69711028 | Msa0699110:intron | 30.0% | |
| ! | ATAGCATTGAAGAGAATTTC+AGG | - | chr4_4:69711096-69711115 | Msa0699120:CDS | 30.0% |
| AAAGGAAAACACCAAAAGAA+AGG | + | chr4_4:69711365-69711384 | Msa0699110:intron | 30.0% | |
| !! | CTCTTATGGTGATTATTTTG+TGG | - | chr4_4:69711436-69711455 | None:intergenic | 30.0% |
| TTTGAATCATGTTATGGTGA+AGG | + | chr4_4:69711508-69711527 | Msa0699110:intron | 30.0% | |
| !! | CACTAGAAAACAGCTTTAAA+TGG | + | chr4_4:69711639-69711658 | Msa0699110:intron | 30.0% |
| ! | AAACTCTCTTTTCTTGAGTT+TGG | - | chr4_4:69711714-69711733 | None:intergenic | 30.0% |
| !!! | CAAGAAAAGAGAGTTTTTTG+TGG | + | chr4_4:69711718-69711737 | Msa0699110:intron | 30.0% |
| !!! | GAGTTTTTTGTGGTGAATAA+AGG | + | chr4_4:69711728-69711747 | Msa0699110:intron | 30.0% |
| ! | TTTTTGTGGTGAATAAAGGT+AGG | + | chr4_4:69711732-69711751 | Msa0699110:intron | 30.0% |
| AAGGGTTATGGTACTTAAAA+AGG | + | chr4_4:69711765-69711784 | Msa0699110:intron | 30.0% | |
| TTAGAAATAGGATAGGAGTT+GGG | + | chr4_4:69711834-69711853 | Msa0699110:intron | 30.0% | |
| ! | CAGTCATATTTGTTTCTTCT+TGG | + | chr4_4:69711933-69711952 | Msa0699110:intron | 30.0% |
| AAGTACAGTAACAAACTTCT+TGG | + | chr4_4:69711980-69711999 | Msa0699110:intron | 30.0% | |
| AGTACAGTAACAAACTTCTT+GGG | + | chr4_4:69711981-69712000 | Msa0699110:intron | 30.0% | |
| ! | AGGTCATTCTATTTAGAATG+TGG | - | chr4_4:69712008-69712027 | None:intergenic | 30.0% |
| GAATGACCTACAAATTTGAT+AGG | + | chr4_4:69712019-69712038 | Msa0699110:intron | 30.0% | |
| TTTGGTCCTATCAAATTTGT+AGG | - | chr4_4:69712028-69712047 | None:intergenic | 30.0% | |
| ! | ATTTGTTACTTCTGCATATG+TGG | + | chr4_4:69712129-69712148 | Msa0699110:intron | 30.0% |
| TGGTAGAAGGTAGTTTAAAA+TGG | + | chr4_4:69712191-69712210 | Msa0699110:intron | 30.0% | |
| AGGTATAGTTACGAATTAGA+AGG | - | chr4_4:69712473-69712492 | None:intergenic | 30.0% | |
| CTCAAAGAAGAAAAACAAAC+AGG | - | chr4_4:69712493-69712512 | None:intergenic | 30.0% | |
| GTTTAGTGCTATATTGTTCA+GGG | - | chr4_4:69712535-69712554 | None:intergenic | 30.0% | |
| AGTTTAGTGCTATATTGTTC+AGG | - | chr4_4:69712536-69712555 | None:intergenic | 30.0% | |
| GCCTCAAATGTATTGAATAT+AGG | - | chr4_4:69712593-69712612 | None:intergenic | 30.0% | |
| GAGAAAAGAGTGAAAGTAAA+AGG | - | chr4_4:69712769-69712788 | None:intergenic | 30.0% | |
| GATCTAGACAATTCTATGAA+AGG | - | chr4_4:69713140-69713159 | None:intergenic | 30.0% | |
| ATAGAATTGTCTAGATCAAC+AGG | + | chr4_4:69713143-69713162 | Msa0699110:intron | 30.0% | |
| TGTCATGAGTAATATTTACG+TGG | + | chr4_4:69713187-69713206 | Msa0699110:intron | 30.0% | |
| !!! | GTTTTTTACAATCACGATGA+TGG | + | chr4_4:69713242-69713261 | Msa0699110:intron | 30.0% |
| GTTAATATTAGATGACTGCA+AGG | + | chr4_4:69713264-69713283 | Msa0699110:intron | 30.0% | |
| CTTCTATATTCATACAAGGA+TGG | - | chr4_4:69713362-69713381 | None:intergenic | 30.0% | |
| ATGATAGATCCTTTGCTTAT+TGG | + | chr4_4:69713425-69713444 | Msa0699110:intron | 30.0% | |
| GATAGAATACCAATAAGCAA+AGG | - | chr4_4:69713437-69713456 | None:intergenic | 30.0% | |
| AATTTATCCGAGAAAGTAGA+TGG | + | chr4_4:69713498-69713517 | Msa0699110:CDS | 30.0% | |
| AGAAGAAAACAAGAGAGAAT+GGG | - | chr4_4:69713591-69713610 | None:intergenic | 30.0% | |
| AAACAACGGTTAAATTAGTG+AGG | - | chr4_4:69713785-69713804 | None:intergenic | 30.0% | |
| GACAGTAGCTATATAAACAA+CGG | - | chr4_4:69713799-69713818 | None:intergenic | 30.0% | |
| ! | ATTTGAAGGTTTTTACACTC+AGG | - | chr4_4:69713821-69713840 | None:intergenic | 30.0% |
| ACCAGATTAAGCATATGAAT+CGG | + | chr4_4:69713950-69713969 | Msa0699110:intron | 30.0% | |
| ! | CATAATTGTTATTGGATTGG+TGG | - | chr4_4:69713997-69714016 | None:intergenic | 30.0% |
| !!! | CAGACGGTTCAATTTTTTAA+AGG | + | chr4_4:69714046-69714065 | Msa0699110:intron | 30.0% |
| AACAAAACAATGTTACCTTC+TGG | + | chr4_4:69714122-69714141 | Msa0699110:intron | 30.0% | |
| !! | GCGCATTTTAACATCTATTT+AGG | - | chr4_4:69714164-69714183 | None:intergenic | 30.0% |
| !!! | ATGAAGTTTTTCAAGAGACT+GGG | - | chr4_4:69714480-69714499 | None:intergenic | 30.0% |
| !!! | TATGAAGTTTTTCAAGAGAC+TGG | - | chr4_4:69714481-69714500 | None:intergenic | 30.0% |
| !!! | TGATTTAGTTTTCAGAACCT+GGG | + | chr4_4:69714503-69714522 | Msa0699110:intron | 30.0% |
| ! | GCAATATTTGGAATTAGAAC+AGG | - | chr4_4:69714540-69714559 | None:intergenic | 30.0% |
| !! | AAGGCTTCTAAAGCAATATT+TGG | - | chr4_4:69714552-69714571 | None:intergenic | 30.0% |
| !!! | AATGCTGTTTTGATTAAAGG+GGG | - | chr4_4:69714624-69714643 | None:intergenic | 30.0% |
| AAGAATGTTACAAATGCTCA+AGG | + | chr4_4:69714775-69714794 | Msa0699110:CDS | 30.0% | |
| AAATGATTAACATGCAACAG+AGG | - | chr4_4:69714811-69714830 | None:intergenic | 30.0% | |
| ! | ACTTGTTAAATAACTAGCAC+TGG | - | chr4_4:69714917-69714936 | None:intergenic | 30.0% |
| GGTAATTCATCAATGATAGA+GGG | - | chr4_4:69715051-69715070 | None:intergenic | 30.0% | |
| TGGTAATTCATCAATGATAG+AGG | - | chr4_4:69715052-69715071 | None:intergenic | 30.0% | |
| TTGGTCTATTGTACATATTG+AGG | + | chr4_4:69715197-69715216 | Msa0699110:three_prime_UTR | 30.0% | |
| CAACTTGGTTTAGATTTGTA+TGG | + | chr4_4:69715251-69715270 | Msa0699110:three_prime_UTR | 30.0% | |
| ! | GTTTCACAATCACTCTTTTC+CGG | + | chr4_4:69703799-69703818 | Msa0699110:intron | 35.0% |
| GAAGTTGAAATTTACAGTGC+CGG | - | chr4_4:69703821-69703840 | None:intergenic | 35.0% | |
| ! | GTAATGTTACTTGATTGCAG+TGG | + | chr4_4:69703861-69703880 | Msa0699110:intron | 35.0% |
| !! | TTTGTTTTCAGTTCAATGCG+TGG | + | chr4_4:69704081-69704100 | Msa0699110:intron | 35.0% |
| CTTGAACCAATTGAATTTGC+GGG | - | chr4_4:69704128-69704147 | None:intergenic | 35.0% | |
| AAGCTAACCTCAATACATAC+AGG | + | chr4_4:69704166-69704185 | Msa0699110:CDS | 35.0% | |
| TAACATTGTTTGAGCAGCAT+CGG | - | chr4_4:69704374-69704393 | None:intergenic | 35.0% | |
| TGCTGCTCAAACAATGTTAA+TGG | + | chr4_4:69704375-69704394 | Msa0699110:CDS | 35.0% | |
| ! | AGTTCTCAAGTCACATGTTT+TGG | + | chr4_4:69704435-69704454 | Msa0699110:CDS | 35.0% |
| ! | GTTCTCAAGTCACATGTTTT+GGG | + | chr4_4:69704436-69704455 | Msa0699110:CDS | 35.0% |
| ! | TTCTCAAGTCACATGTTTTG+GGG | + | chr4_4:69704437-69704456 | Msa0699110:CDS | 35.0% |
| !!! | TGTTTTGGGGCTTCAAATTA+AGG | + | chr4_4:69704450-69704469 | Msa0699110:CDS | 35.0% |
| AGGTCAGAGGTTATTCTTAA+AGG | + | chr4_4:69704470-69704489 | Msa0699110:intron | 35.0% | |
| ACCGATCATAGAAAATATGG+TGG | - | chr4_4:69705033-69705052 | None:intergenic | 35.0% | |
| !! | AGCACCGATCATAGAAAATA+TGG | - | chr4_4:69705036-69705055 | None:intergenic | 35.0% |
| AGACTAGACGATATAGGATT+AGG | - | chr4_4:69705087-69705106 | None:intergenic | 35.0% | |
| !! | AGAATGGTGTGTTTGATTTG+TGG | - | chr4_4:69705112-69705131 | None:intergenic | 35.0% |
| ! | AGAAGTATAGCTTGAGACAT+GGG | - | chr4_4:69705411-69705430 | None:intergenic | 35.0% |
| TAAGCTAATGAAGCGTATCA+CGG | - | chr4_4:69705444-69705463 | None:intergenic | 35.0% | |
| TTTGCCAAACAAATTCATGG+GGG | + | chr4_4:69705481-69705500 | Msa0699110:intron | 35.0% | |
| CTAAAGAAGAAGTTAGGAAG+TGG | + | chr4_4:69705596-69705615 | Msa0699110:CDS | 35.0% | |
| ! | AAGTTAGGAAGTGGATTTGT+AGG | + | chr4_4:69705605-69705624 | Msa0699110:CDS | 35.0% |
| ! | AAGAAAAGCTACTAGCTTGT+GGG | + | chr4_4:69705644-69705663 | Msa0699110:CDS | 35.0% |
| TAAAACTTGCATCCTGAGTT+CGG | - | chr4_4:69705683-69705702 | None:intergenic | 35.0% | |
| ! | TGCCTTATTATGAGCAATAC+CGG | - | chr4_4:69705731-69705750 | None:intergenic | 35.0% |
| GCGTAATTATAAACAAGCCA+AGG | - | chr4_4:69705762-69705781 | None:intergenic | 35.0% | |
| !! | GGAAGGTGTTGTAAGAAATT+TGG | - | chr4_4:69705786-69705805 | None:intergenic | 35.0% |
| TTTCTTACAACACCTTCCTT+AGG | + | chr4_4:69705788-69705807 | Msa0699110:intron | 35.0% | |
| ! | TTGAAGAAAACTTGGCTTTC+AGG | + | chr4_4:69706194-69706213 | Msa0699110:intron | 35.0% |
| ACTTCCTTACAAAGTGATCT+TGG | + | chr4_4:69706241-69706260 | Msa0699110:CDS | 35.0% | |
| AGAAGCTACAACAACGTTAT+GGG | + | chr4_4:69706302-69706321 | Msa0699110:CDS | 35.0% | |
| AACGTTATGGGATCAATACT+GGG | + | chr4_4:69706314-69706333 | Msa0699110:CDS | 35.0% | |
| !!! | TGCGATCTCATGTTTTTAGT+AGG | + | chr4_4:69706397-69706416 | Msa0699110:intron | 35.0% |
| CTGCATGTATTACCTTAACT+AGG | + | chr4_4:69706446-69706465 | Msa0699110:intron | 35.0% | |
| ! | TTTTACAGCATTGCAGTACT+TGG | + | chr4_4:69706589-69706608 | Msa0699110:intron | 35.0% |
| ! | GAAATGTTTTTCCAGAACCA+TGG | - | chr4_4:69706677-69706696 | None:intergenic | 35.0% |
| !! | GTTCTGGAAAAACATTTCCT+GGG | + | chr4_4:69706679-69706698 | Msa0699110:CDS | 35.0% |
| ! | CCTTTGAGAAACTAAGGATT+GGG | - | chr4_4:69706821-69706840 | None:intergenic | 35.0% |
| ! | ACCTTTGAGAAACTAAGGAT+TGG | - | chr4_4:69706822-69706841 | None:intergenic | 35.0% |
| CTTAGTTTCTCAAAGGTCTT+GGG | + | chr4_4:69706825-69706844 | Msa0699110:intron | 35.0% | |
| !! | TTTTCCTTCAGGTTCAACAT+TGG | + | chr4_4:69706989-69707008 | Msa0699110:intron | 35.0% |
| !! | TCAACATTGGCTTAATGAAC+TGG | + | chr4_4:69707002-69707021 | Msa0699110:CDS | 35.0% |
| !! | CAACATTGGCTTAATGAACT+GGG | + | chr4_4:69707003-69707022 | Msa0699110:CDS | 35.0% |
| CTGACATGGATCAAAACAAA+CGG | + | chr4_4:69707052-69707071 | Msa0699110:CDS | 35.0% | |
| CTAACGGCAGTGAAAATAAA+TGG | + | chr4_4:69707396-69707415 | Msa0699110:CDS | 35.0% | |
| AACGGCAGTGAAAATAAATG+GGG | + | chr4_4:69707398-69707417 | Msa0699110:CDS | 35.0% | |
| TCAAACTTACAGATGGTATG+GGG | - | chr4_4:69707460-69707479 | None:intergenic | 35.0% | |
| GTTCAAACTTACAGATGGTA+TGG | - | chr4_4:69707462-69707481 | None:intergenic | 35.0% | |
| AAGCAGTTCAAACTTACAGA+TGG | - | chr4_4:69707467-69707486 | None:intergenic | 35.0% | |
| ATCTGTAAGTTTGAACTGCT+TGG | + | chr4_4:69707466-69707485 | Msa0699110:intron | 35.0% | |
| TACTAACTTGATTGTGGTTC+AGG | + | chr4_4:69707491-69707510 | Msa0699110:intron | 35.0% | |
| ! | TGATATCGCTATCTGTTTTG+AGG | - | chr4_4:69707546-69707565 | None:intergenic | 35.0% |
| ! | ATAGCTTAGAATACGGACTA+CGG | - | chr4_4:69707634-69707653 | None:intergenic | 35.0% |
| TTCAGTGAGACATTTCCATA+TGG | + | chr4_4:69707785-69707804 | Msa0699110:CDS | 35.0% | |
| TGGTTTGATGAAGAACCATA+TGG | - | chr4_4:69707803-69707822 | None:intergenic | 35.0% | |
| TGGTTCTTCATCAAACCAAT+CGG | + | chr4_4:69707805-69707824 | Msa0699110:CDS | 35.0% | |
| CAATGACATTATCTACCGAT+TGG | - | chr4_4:69707823-69707842 | None:intergenic | 35.0% | |
| ! | AGAGAAGATCTAAAACCTGA+AGG | - | chr4_4:69707866-69707885 | None:intergenic | 35.0% |
| TAGCCTCAATCAAATTACAG+TGG | - | chr4_4:69707929-69707948 | None:intergenic | 35.0% | |
| AGCAGGTAGTGAAAATTGTT+TGG | + | chr4_4:69707957-69707976 | Msa0699110:intron | 35.0% | |
| ! | ATTTTCACGTAAAATGCGAC+TGG | - | chr4_4:69708090-69708109 | None:intergenic | 35.0% |
| CAAAAAATCTATCCACCTTG+CGG | - | chr4_4:69708178-69708197 | None:intergenic | 35.0% | |
| !! | TTGGCTAGTTCTATAGTGTA+GGG | + | chr4_4:69708278-69708297 | Msa0699110:intron | 35.0% |
| TCTGTTATAAGAATGCTGAG+TGG | + | chr4_4:69708399-69708418 | Msa0699110:intron | 35.0% | |
| AGCCATACACTTAGATCTAA+AGG | + | chr4_4:69708569-69708588 | Msa0699110:intron | 35.0% | |
| GCCATACACTTAGATCTAAA+GGG | + | chr4_4:69708570-69708589 | Msa0699110:intron | 35.0% | |
| GTATCTTATGTGAGAATGGT+AGG | - | chr4_4:69708608-69708627 | None:intergenic | 35.0% | |
| ATGGGTATCTTATGTGAGAA+TGG | - | chr4_4:69708612-69708631 | None:intergenic | 35.0% | |
| ATCTCTCAGAGAAATGGAAA+CGG | + | chr4_4:69708921-69708940 | Msa0699110:intron | 35.0% | |
| !!! | GTCGTCGGGATTTTTAATTT+GGG | - | chr4_4:69709166-69709185 | None:intergenic | 35.0% |
| !! | TGTCGTCGGGATTTTTAATT+TGG | - | chr4_4:69709167-69709186 | None:intergenic | 35.0% |
| TACTTTCATAGGGAACATCT+AGG | - | chr4_4:69709288-69709307 | None:intergenic | 35.0% | |
| TGTAGGTTGTAGTCAGTATT+AGG | - | chr4_4:69709380-69709399 | None:intergenic | 35.0% | |
| ACAACCTACATCCTATTATG+TGG | + | chr4_4:69709390-69709409 | Msa0699110:intron | 35.0% | |
| CAACCTACATCCTATTATGT+GGG | + | chr4_4:69709391-69709410 | Msa0699110:intron | 35.0% | |
| !! | TATCAACCTTGCTATTGAAC+AGG | + | chr4_4:69709587-69709606 | Msa0699110:intron | 35.0% |
| TAGTTTCCTGTTCAATAGCA+AGG | - | chr4_4:69709596-69709615 | Msa0699120:CDS | 35.0% | |
| CAAACTGTTTCAGAGAAAGA+AGG | - | chr4_4:69709707-69709726 | Msa0699120:CDS | 35.0% | |
| AGTGAATGAGCTGAAACTAT+TGG | - | chr4_4:69709911-69709930 | Msa0699120:CDS | 35.0% | |
| AGGGAAGATACAAAATCTTG+AGG | - | chr4_4:69710337-69710356 | Msa0699120:CDS | 35.0% | |
| CAAAGAAGAGAGCAATTGAA+GGG | - | chr4_4:69710356-69710375 | Msa0699120:CDS | 35.0% | |
| ACAAAGAAGAGAGCAATTGA+AGG | - | chr4_4:69710357-69710376 | Msa0699120:CDS | 35.0% | |
| AGCTACAGAACATTTGACAA+CGG | - | chr4_4:69710384-69710403 | Msa0699120:CDS | 35.0% | |
| AGATTGAGGCAATTCTCTAA+GGG | + | chr4_4:69710544-69710563 | Msa0699110:intron | 35.0% | |
| !! | AAATTAGGTGGCTTTTGAGT+TGG | + | chr4_4:69710680-69710699 | Msa0699110:intron | 35.0% |
| !!! | AATTAGGTGGCTTTTGAGTT+GGG | + | chr4_4:69710681-69710700 | Msa0699110:intron | 35.0% |
| TGGTGAAGATTTAGTACATC+TGG | + | chr4_4:69710764-69710783 | Msa0699110:intron | 35.0% | |
| AGATTTAGTACATCTGGTGA+AGG | + | chr4_4:69710770-69710789 | Msa0699110:intron | 35.0% | |
| !! | AGGGATTGTAGCTTTGTTTA+TGG | + | chr4_4:69710816-69710835 | Msa0699110:intron | 35.0% |
| GAACTACTACTACAACAACA+TGG | - | chr4_4:69710942-69710961 | Msa0699120:CDS | 35.0% | |
| ! | TTGTGCAATGTTTTCTGATG+AGG | + | chr4_4:69710985-69711004 | Msa0699110:intron | 35.0% |
| ! | TGTGCAATGTTTTCTGATGA+GGG | + | chr4_4:69710986-69711005 | Msa0699110:intron | 35.0% |
| GATGTCTCCACTTATACAAA+TGG | - | chr4_4:69711019-69711038 | Msa0699120:CDS | 35.0% | |
| CAAAATATGCATGAGCAAAC+TGG | - | chr4_4:69711223-69711242 | Msa0699120:CDS | 35.0% | |
| !! | CAGTTTGCTCATGCATATTT+TGG | + | chr4_4:69711221-69711240 | Msa0699110:intron | 35.0% |
| AAAGGTAGGAGGAAGTAAAA+AGG | + | chr4_4:69711746-69711765 | Msa0699110:intron | 35.0% | |
| AAGGTAGGAGGAAGTAAAAA+GGG | + | chr4_4:69711747-69711766 | Msa0699110:intron | 35.0% | |
| GTTAGAAATAGGATAGGAGT+TGG | + | chr4_4:69711833-69711852 | Msa0699110:intron | 35.0% | |
| TAGAAATAGGATAGGAGTTG+GGG | + | chr4_4:69711835-69711854 | Msa0699110:intron | 35.0% | |
| ! | CATGAACCTAGGAATTTTTC+CGG | + | chr4_4:69712414-69712433 | Msa0699110:intron | 35.0% |
| CTTAATCCGGAAAAATTCCT+AGG | - | chr4_4:69712423-69712442 | None:intergenic | 35.0% | |
| TGTAATGTTCAGACTTCAGA+TGG | + | chr4_4:69712555-69712574 | Msa0699110:intron | 35.0% | |
| ! | TTCAATACATTTGAGGCACA+TGG | + | chr4_4:69712596-69712615 | Msa0699110:intron | 35.0% |
| GGAATCACTCGAAAACATTT+AGG | - | chr4_4:69713072-69713091 | None:intergenic | 35.0% | |
| AATATTAGATGACTGCAAGG+TGG | + | chr4_4:69713267-69713286 | Msa0699110:intron | 35.0% | |
| ! | CAAGGTGGATAGATTTTGAA+AGG | + | chr4_4:69713282-69713301 | Msa0699110:intron | 35.0% |
| TAATGTCTAATGTTGGGATC+TGG | + | chr4_4:69713308-69713327 | Msa0699110:intron | 35.0% | |
| CAGAAGAAAACAAGAGAGAA+TGG | - | chr4_4:69713592-69713611 | None:intergenic | 35.0% | |
| !!! | TTCTCTCTTGTTTTCTTCTG+AGG | + | chr4_4:69713592-69713611 | Msa0699110:intron | 35.0% |
| !!! | GTTTTCTTCTGAGGTTATGA+TGG | + | chr4_4:69713601-69713620 | Msa0699110:intron | 35.0% |
| CTTCATTTCCTGGAATCAAA+AGG | - | chr4_4:69713633-69713652 | None:intergenic | 35.0% | |
| ! | TGCTTTCAAACTGGAAGTAT+TGG | - | chr4_4:69713716-69713735 | None:intergenic | 35.0% |
| ! | GGTTACAATTTTGCAAAGGA+AGG | + | chr4_4:69713843-69713862 | Msa0699110:intron | 35.0% |
| ! | ACCGATTCATATGCTTAATC+TGG | - | chr4_4:69713954-69713973 | None:intergenic | 35.0% |
| ! | TAGTCTAACACTTTTCTTGG+AGG | + | chr4_4:69714022-69714041 | Msa0699110:intron | 35.0% |
| ! | TGTATAAAGTGCGTTTTCCT+GGG | + | chr4_4:69714215-69714234 | Msa0699110:intron | 35.0% |
| GTTTCATACACTGAAATGCA+TGG | + | chr4_4:69714237-69714256 | Msa0699110:intron | 35.0% | |
| !! | AGCATGTCTTTCAAGTTTCA+AGG | - | chr4_4:69714288-69714307 | None:intergenic | 35.0% |
| ! | GGTTGAACTTTTCATGAATG+TGG | + | chr4_4:69714320-69714339 | Msa0699110:intron | 35.0% |
| ! | AACTTTTCATGAATGTGGCA+TGG | + | chr4_4:69714325-69714344 | Msa0699110:intron | 35.0% |
| AGTGGACATACCTATATGTA+TGG | + | chr4_4:69714418-69714437 | Msa0699110:intron | 35.0% | |
| TCAACTGCAACCATACATAT+AGG | - | chr4_4:69714431-69714450 | None:intergenic | 35.0% | |
| !!! | CTGATTTAGTTTTCAGAACC+TGG | + | chr4_4:69714502-69714521 | Msa0699110:intron | 35.0% |
| GTCATATCAACCCTTCAATT+CGG | + | chr4_4:69714593-69714612 | Msa0699110:intron | 35.0% | |
| ATCAAAACAGCATTAACTCG+TGG | + | chr4_4:69714630-69714649 | Msa0699110:intron | 35.0% | |
| CAATGTTATAACTCCAAGCT+TGG | - | chr4_4:69715017-69715036 | None:intergenic | 35.0% | |
| TGAATTACCACCAGAAATTC+AGG | + | chr4_4:69715062-69715081 | Msa0699110:CDS | 35.0% | |
| AGTCATTGCTCACGTTGATA+TGG | + | chr4_4:69703749-69703768 | Msa0699110:CDS | 40.0% | |
| ! | ATGGATTGCTTCTACGTTCA+AGG | + | chr4_4:69703768-69703787 | Msa0699110:CDS | 40.0% |
| TTCTACGTTCAAGGTTCCTA+GGG | + | chr4_4:69703777-69703796 | Msa0699110:intron | 40.0% | |
| AAGAGTGATTGTGAAACCCT+AGG | - | chr4_4:69703796-69703815 | None:intergenic | 40.0% | |
| AGAGGAAGCAACCAAGTTTA+AGG | + | chr4_4:69703887-69703906 | Msa0699110:CDS | 40.0% | |
| GAGGAAGCAACCAAGTTTAA+GGG | + | chr4_4:69703888-69703907 | Msa0699110:CDS | 40.0% | |
| AGGAAGCAACCAAGTTTAAG+GGG | + | chr4_4:69703889-69703908 | Msa0699110:CDS | 40.0% | |
| TTGTACTGAACAACTGCAGT+AGG | - | chr4_4:69703919-69703938 | None:intergenic | 40.0% | |
| GTTCAGTACAACTCCTACAA+AGG | + | chr4_4:69703928-69703947 | Msa0699110:CDS | 40.0% | |
| CTGCATTCCTGTATGTATTG+AGG | - | chr4_4:69704176-69704195 | None:intergenic | 40.0% | |
| CTCAATACATACAGGAATGC+AGG | + | chr4_4:69704174-69704193 | Msa0699110:CDS | 40.0% | |
| TGAGAGAGCTTCAATTGATG+AGG | + | chr4_4:69704333-69704352 | Msa0699110:CDS | 40.0% | |
| ! | AAGCCTTATCCCAGTAAGTA+AGG | + | chr4_4:69704787-69704806 | Msa0699110:intron | 40.0% |
| CAACCTTACTTACTGGGATA+AGG | - | chr4_4:69704793-69704812 | None:intergenic | 40.0% | |
| CTTATCCCAGTAAGTAAGGT+TGG | + | chr4_4:69704791-69704810 | Msa0699110:intron | 40.0% | |
| TGTAGCCAACCTTACTTACT+GGG | - | chr4_4:69704799-69704818 | None:intergenic | 40.0% | |
| ATGTAGCCAACCTTACTTAC+TGG | - | chr4_4:69704800-69704819 | None:intergenic | 40.0% | |
| ! | AGTAAGTAAGGTTGGCTACA+TGG | + | chr4_4:69704799-69704818 | Msa0699110:intron | 40.0% |
| AGTATGGAGAGTAGATCATG+CGG | - | chr4_4:69704958-69704977 | None:intergenic | 40.0% | |
| GTGGTAAGACTAGACGATAT+AGG | - | chr4_4:69705093-69705112 | None:intergenic | 40.0% | |
| AAGCGTAGCAAAGATGAGAA+TGG | - | chr4_4:69705128-69705147 | None:intergenic | 40.0% | |
| ACCAGCAATGTTGTATGCAA+CGG | - | chr4_4:69705188-69705207 | None:intergenic | 40.0% | |
| ! | AGTCCACCTTTGAGTCTTTT+TGG | + | chr4_4:69705321-69705340 | Msa0699110:intron | 40.0% |
| AGTGAGCCAAAAAGACTCAA+AGG | - | chr4_4:69705330-69705349 | None:intergenic | 40.0% | |
| !!! | TTGAGTCTTTTTGGCTCACT+AGG | + | chr4_4:69705330-69705349 | Msa0699110:intron | 40.0% |
| ! | CAGAAGTATAGCTTGAGACA+TGG | - | chr4_4:69705412-69705431 | None:intergenic | 40.0% |
| ! | CATACCCCCATGAATTTGTT+TGG | - | chr4_4:69705488-69705507 | None:intergenic | 40.0% |
| ! | CACAAGCTAGTAGCTTTTCT+TGG | - | chr4_4:69705645-69705664 | None:intergenic | 40.0% |
| ! | CAAGAAAAGCTACTAGCTTG+TGG | + | chr4_4:69705643-69705662 | Msa0699110:CDS | 40.0% |
| ! | AGAAAAGCTACTAGCTTGTG+GGG | + | chr4_4:69705645-69705664 | Msa0699110:CDS | 40.0% |
| CTTATTATGAGCAATACCGG+CGG | - | chr4_4:69705728-69705747 | None:intergenic | 40.0% | |
| !! | AACATCAAGGACTAGTCCTA+AGG | - | chr4_4:69705807-69705826 | None:intergenic | 40.0% |
| TGCCACATTCATCTGTTGAA+GGG | + | chr4_4:69705925-69705944 | Msa0699110:CDS | 40.0% | |
| AACCCTTCAACAGATGAATG+TGG | - | chr4_4:69705930-69705949 | None:intergenic | 40.0% | |
| GATGCCAAGATCACTTTGTA+AGG | - | chr4_4:69706248-69706267 | None:intergenic | 40.0% | |
| AAACTGAAGCAGATCACCAA+CGG | - | chr4_4:69706275-69706294 | None:intergenic | 40.0% | |
| ! | TGATCTGCTTCAGTTTTCAG+AGG | + | chr4_4:69706279-69706298 | Msa0699110:CDS | 40.0% |
| GAGAAGCTACAACAACGTTA+TGG | + | chr4_4:69706301-69706320 | Msa0699110:CDS | 40.0% | |
| CAACGTTATGGGATCAATAC+TGG | + | chr4_4:69706313-69706332 | Msa0699110:CDS | 40.0% | |
| TGTGCGTTCATGGTTTCTTA+TGG | + | chr4_4:69706511-69706530 | Msa0699110:intron | 40.0% | |
| AATATTGCGAGAGGAATCAG+CGG | + | chr4_4:69706618-69706637 | Msa0699110:CDS | 40.0% | |
| !! | GGTTCTGGAAAAACATTTCC+TGG | + | chr4_4:69706678-69706697 | Msa0699110:CDS | 40.0% |
| ! | GCTAGAAGTTTTCATCAGCT+CGG | - | chr4_4:69706746-69706765 | None:intergenic | 40.0% |
| CCCAATCCTTAGTTTCTCAA+AGG | + | chr4_4:69706818-69706837 | Msa0699110:intron | 40.0% | |
| ! | CCAAGACCTTTGAGAAACTA+AGG | - | chr4_4:69706827-69706846 | None:intergenic | 40.0% |
| CCTTAGTTTCTCAAAGGTCT+TGG | + | chr4_4:69706824-69706843 | Msa0699110:intron | 40.0% | |
| TAAGCCAATGTTGAACCTGA+AGG | - | chr4_4:69706996-69707015 | None:intergenic | 40.0% | |
| TTTGATCCATGTCAGAGTCA+AGG | - | chr4_4:69707047-69707066 | None:intergenic | 40.0% | |
| TCTGCATGCTAGAGCATATA+AGG | + | chr4_4:69707092-69707111 | Msa0699110:CDS | 40.0% | |
| ! | TCTTTTGTCCTCTTCATCAG+AGG | + | chr4_4:69707194-69707213 | Msa0699110:intron | 40.0% |
| GCATAAAACCTCTGATGAAG+AGG | - | chr4_4:69707205-69707224 | None:intergenic | 40.0% | |
| GCCCTAACTCTATTTCAATC+TGG | + | chr4_4:69707338-69707357 | Msa0699110:CDS | 40.0% | |
| ! | TAGCTTAGAATACGGACTAC+GGG | - | chr4_4:69707633-69707652 | None:intergenic | 40.0% |
| ! | TGTTGATCTAGACACGCTTT+TGG | - | chr4_4:69708042-69708061 | None:intergenic | 40.0% |
| ! | AAAAGCGTGTCTAGATCAAC+AGG | + | chr4_4:69708041-69708060 | Msa0699110:CDS | 40.0% |
| GCAAATATTAGATGACCGCA+AGG | + | chr4_4:69708160-69708179 | Msa0699110:intron | 40.0% | |
| AATATTAGATGACCGCAAGG+TGG | + | chr4_4:69708163-69708182 | Msa0699110:intron | 40.0% | |
| TTAAGCCAACTTTCTCATCC+CGG | - | chr4_4:69708244-69708263 | None:intergenic | 40.0% | |
| !! | CTTGGCTAGTTCTATAGTGT+AGG | + | chr4_4:69708277-69708296 | Msa0699110:intron | 40.0% |
| GCCCTTTAGATCTAAGTGTA+TGG | - | chr4_4:69708574-69708593 | None:intergenic | 40.0% | |
| ! | TATGTATGATGGAACGAAGG+AGG | + | chr4_4:69708752-69708771 | Msa0699110:intron | 40.0% |
| !!! | GTCTGTTATTTTGTCTCTGC+TGG | - | chr4_4:69709025-69709044 | None:intergenic | 40.0% |
| TTCCGATGCAAAATTGTCGT+CGG | - | chr4_4:69709181-69709200 | None:intergenic | 40.0% | |
| TGTCCCACATAATAGGATGT+AGG | - | chr4_4:69709397-69709416 | Msa0699120:CDS | 40.0% | |
| AAACAGGGTGATTGATGTTC+TGG | - | chr4_4:69709439-69709458 | Msa0699120:CDS | 40.0% | |
| TGCAAGTGCTATAGCAAACA+GGG | - | chr4_4:69709454-69709473 | Msa0699120:CDS | 40.0% | |
| ATGCAAGTGCTATAGCAAAC+AGG | - | chr4_4:69709455-69709474 | Msa0699120:CDS | 40.0% | |
| TCACTTATGCAGGTAACTGA+AGG | - | chr4_4:69709489-69709508 | Msa0699120:intron | 40.0% | |
| ! | ATGAGGTGTTTCACTTATGC+AGG | - | chr4_4:69709499-69709518 | Msa0699120:intron | 40.0% |
| TTGGAACTTAACCATGTTGC+AGG | - | chr4_4:69709640-69709659 | Msa0699120:CDS | 40.0% | |
| GTTTGTTTCCAAGGTTATGG+AGG | - | chr4_4:69709671-69709690 | Msa0699120:CDS | 40.0% | |
| GCTGTTTGTTTCCAAGGTTA+TGG | - | chr4_4:69709674-69709693 | Msa0699120:CDS | 40.0% | |
| !! | TTGCTTGCTGTTTGTTTCCA+AGG | - | chr4_4:69709680-69709699 | Msa0699120:CDS | 40.0% |
| !! | AAGACAGTGAGGTTGATGTT+CGG | - | chr4_4:69709753-69709772 | Msa0699120:CDS | 40.0% |
| GAGGAAATCAAAAGACAGTG+AGG | - | chr4_4:69709764-69709783 | Msa0699120:CDS | 40.0% | |
| GAATGAGCTGAAACTATTGG+AGG | - | chr4_4:69709908-69709927 | Msa0699120:CDS | 40.0% | |
| !! | GGGCAGTTTTGATCTAATAC+AGG | - | chr4_4:69709992-69710011 | Msa0699120:intron | 40.0% |
| ! | GCTTTTGTTGGCAAAGGAAA+AGG | - | chr4_4:69710410-69710429 | Msa0699120:CDS | 40.0% |
| !! | AACAAGGTCACTGCTTTTGT+TGG | - | chr4_4:69710422-69710441 | Msa0699120:CDS | 40.0% |
| ! | TCAAGGAATGGTTCTCGTTT+TGG | - | chr4_4:69710494-69710513 | Msa0699120:CDS | 40.0% |
| GAGATTGAGGCAATTCTCTA+AGG | + | chr4_4:69710543-69710562 | Msa0699110:intron | 40.0% | |
| GGAAGGTTCATAGGAAATAG+AGG | + | chr4_4:69710581-69710600 | Msa0699110:intron | 40.0% | |
| TTTCTTGGAGACCTTCCAAT+AGG | - | chr4_4:69710644-69710663 | Msa0699120:CDS | 40.0% | |
| ! | CATTACTCGAGGAGTTTTCT+TGG | - | chr4_4:69710659-69710678 | Msa0699120:CDS | 40.0% |
| CAAGAAAACTCCTCGAGTAA+TGG | + | chr4_4:69710657-69710676 | Msa0699110:intron | 40.0% | |
| ! | CTCCTCGAGTAATGGAAATT+AGG | + | chr4_4:69710665-69710684 | Msa0699110:intron | 40.0% |
| CACCTAATTTCCATTACTCG+AGG | - | chr4_4:69710670-69710689 | Msa0699120:CDS | 40.0% | |
| ! | CTCGAGTAATGGAAATTAGG+TGG | + | chr4_4:69710668-69710687 | Msa0699110:intron | 40.0% |
| AGTTGGGTTTGTGATGCAAA+TGG | + | chr4_4:69710697-69710716 | Msa0699110:intron | 40.0% | |
| ! | TTTGTGATGCAAATGGTGGA+TGG | + | chr4_4:69710704-69710723 | Msa0699110:intron | 40.0% |
| TGTGAGAATAGATGAAGCTG+AGG | + | chr4_4:69710730-69710749 | Msa0699110:intron | 40.0% | |
| ATAGATGAAGCTGAGGATCT+AGG | + | chr4_4:69710737-69710756 | Msa0699110:intron | 40.0% | |
| ACATCTGGTGAAGGATAATG+AGG | + | chr4_4:69710779-69710798 | Msa0699110:intron | 40.0% | |
| CATCTGGTGAAGGATAATGA+GGG | + | chr4_4:69710780-69710799 | Msa0699110:intron | 40.0% | |
| AGGATAATGAGGGTCTTGAA+TGG | + | chr4_4:69710790-69710809 | Msa0699110:intron | 40.0% | |
| GTTTATGGTTGTGTAGTTGG+TGG | + | chr4_4:69710831-69710850 | Msa0699110:intron | 40.0% | |
| !! | TGTGTAGTTGGTGGTATTCT+TGG | + | chr4_4:69710840-69710859 | Msa0699110:intron | 40.0% |
| ! | TTGGTGGTATTCTTGGTGAT+TGG | + | chr4_4:69710847-69710866 | Msa0699110:intron | 40.0% |
| ! | GGTGTATCAGAATTCGAGTT+GGG | - | chr4_4:69710900-69710919 | Msa0699120:CDS | 40.0% |
| AGGTGTATCAGAATTCGAGT+TGG | - | chr4_4:69710901-69710920 | Msa0699120:CDS | 40.0% | |
| !!! | GGATAACATTTTGGAGCAAG+AGG | - | chr4_4:69710921-69710940 | Msa0699120:CDS | 40.0% |
| TATAAGTGGAGACATCTTCC+AGG | + | chr4_4:69711023-69711042 | Msa0699110:intron | 40.0% | |
| TAAGAGAATTCCTCCACAGA+AGG | + | chr4_4:69711070-69711089 | Msa0699110:intron | 40.0% | |
| TTACCTGCAACCACTTGATT+TGG | + | chr4_4:69711124-69711143 | Msa0699110:intron | 40.0% | |
| !! | CACTTGATTTGGCATGGTTT+GGG | + | chr4_4:69711135-69711154 | Msa0699110:intron | 40.0% |
| !! | ACTTGATTTGGCATGGTTTG+GGG | + | chr4_4:69711136-69711155 | Msa0699110:intron | 40.0% |
| TGGGGAGAGTTATTATCTTC+TGG | + | chr4_4:69711154-69711173 | Msa0699110:intron | 40.0% | |
| TTGCTTTGATTCCGACACAA+TGG | - | chr4_4:69711200-69711219 | Msa0699120:CDS | 40.0% | |
| TCTCCTGAAACTGAACTCAT+TGG | + | chr4_4:69711247-69711266 | Msa0699110:intron | 40.0% | |
| AGACCAATGAGTTCAGTTTC+AGG | - | chr4_4:69711253-69711272 | None:intergenic | 40.0% | |
| TTGTGGTGAATAAAGGTAGG+AGG | + | chr4_4:69711735-69711754 | Msa0699110:intron | 40.0% | |
| GGAGGAAGTAAAAAGGGTTA+TGG | + | chr4_4:69711753-69711772 | Msa0699110:intron | 40.0% | |
| !!! | TTGTTCTGTTTTTGGGGTCA+AGG | + | chr4_4:69711873-69711892 | Msa0699110:intron | 40.0% |
| ! | GGTCAAGGAAATGTGTTGTT+TGG | + | chr4_4:69711888-69711907 | Msa0699110:intron | 40.0% |
| GTTCTTGCAAGTACTTGAGT+AGG | - | chr4_4:69712171-69712190 | None:intergenic | 40.0% | |
| ACTCAAGTACTTGCAAGAAC+TGG | + | chr4_4:69712171-69712190 | Msa0699110:intron | 40.0% | |
| TACTTGCAAGAACTGGTAGA+AGG | + | chr4_4:69712178-69712197 | Msa0699110:intron | 40.0% | |
| GTACTATTCTCCATGAACCT+AGG | + | chr4_4:69712403-69712422 | Msa0699110:intron | 40.0% | |
| CGGAAAAATTCCTAGGTTCA+TGG | - | chr4_4:69712416-69712435 | None:intergenic | 40.0% | |
| GTTACGAATTAGAAGGACAC+TGG | - | chr4_4:69712466-69712485 | None:intergenic | 40.0% | |
| TAGTGCTATATTGTTCAGGG+AGG | - | chr4_4:69712532-69712551 | None:intergenic | 40.0% | |
| AGTCAAGCCATCTACTTTCT+CGG | - | chr4_4:69713508-69713527 | None:intergenic | 40.0% | |
| TGATTCCAGGAAATGAAGAC+AGG | + | chr4_4:69713635-69713654 | Msa0699110:intron | 40.0% | |
| ! | GCAAGCTTAGATTCTTTTGC+AGG | - | chr4_4:69713691-69713710 | None:intergenic | 40.0% |
| CTTCTCAACTGCTTTCAAAC+TGG | - | chr4_4:69713725-69713744 | None:intergenic | 40.0% | |
| GTTGAGAAGAAAAATGCTGC+AGG | + | chr4_4:69713736-69713755 | Msa0699110:CDS | 40.0% | |
| ! | ATTTTGCAAAGGAAGGATCC+AGG | + | chr4_4:69713850-69713869 | Msa0699110:intron | 40.0% |
| !! | TCAGTTTGCTGAACTAGGAT+TGG | - | chr4_4:69713930-69713949 | None:intergenic | 40.0% |
| AGCATATGAATCGGTTAAGC+TGG | + | chr4_4:69713959-69713978 | Msa0699110:intron | 40.0% | |
| ! | TGTTAAAATGCGCTCTAGAC+AGG | + | chr4_4:69714171-69714190 | Msa0699110:intron | 40.0% |
| ! | GTTAAAATGCGCTCTAGACA+GGG | + | chr4_4:69714172-69714191 | Msa0699110:intron | 40.0% |
| ! | CTGTATAAAGTGCGTTTTCC+TGG | + | chr4_4:69714214-69714233 | Msa0699110:intron | 40.0% |
| CATTTCAGTGTATGAAACCC+AGG | - | chr4_4:69714235-69714254 | None:intergenic | 40.0% | |
| TTCTATGTTGCCTCTCAATG+TGG | + | chr4_4:69714261-69714280 | Msa0699110:intron | 40.0% | |
| ! | TGTTTTACTCTCAGTACACC+TGG | + | chr4_4:69714369-69714388 | Msa0699110:intron | 40.0% |
| GTATGGTTGCAGTTGAAGTA+TGG | + | chr4_4:69714435-69714454 | Msa0699110:intron | 40.0% | |
| GAGACTGGGTAAAGATTTGA+TGG | - | chr4_4:69714466-69714485 | None:intergenic | 40.0% | |
| TGGAATTAGAACAGGCACAA+AGG | - | chr4_4:69714532-69714551 | None:intergenic | 40.0% | |
| ATATCAACCCTTCAATTCGG+AGG | + | chr4_4:69714596-69714615 | Msa0699110:intron | 40.0% | |
| !! | GGGGTTGATACAAATAACAG+TGG | + | chr4_4:69714961-69714980 | Msa0699110:CDS | 40.0% |
| AGCGTAGATAATATGCCTCA+AGG | + | chr4_4:69714988-69715007 | Msa0699110:CDS | 40.0% | |
| GAACCTCGTTTAACCACATT+AGG | - | chr4_4:69715123-69715142 | None:intergenic | 40.0% | |
| TTTATCTACTTCTAGCAGGC+CGG | - | chr4_4:69715164-69715183 | None:intergenic | 40.0% | |
| CAGATTTGTGATTGGCAACT+TGG | + | chr4_4:69715236-69715255 | Msa0699110:three_prime_UTR | 40.0% | |
| CTTCTACGTTCAAGGTTCCT+AGG | + | chr4_4:69703776-69703795 | Msa0699110:intron | 45.0% | |
| ACTTGATTGCAGTGGAACAG+AGG | + | chr4_4:69703869-69703888 | Msa0699110:intron | 45.0% | |
| CAGTACAACTCCTACAAAGG+CGG | + | chr4_4:69703931-69703950 | Msa0699110:CDS | 45.0% | |
| AGCTATGAAGCTCGCAAATC+TGG | + | chr4_4:69703970-69703989 | Msa0699110:CDS | 45.0% | |
| ! | CTCGCAAATCTGGTGTCAAA+CGG | + | chr4_4:69703980-69703999 | Msa0699110:CDS | 45.0% |
| AACCAATTGAATTTGCGGGC+AGG | - | chr4_4:69704124-69704143 | None:intergenic | 45.0% | |
| ATACAGGAATGCAGGTTCAG+AGG | + | chr4_4:69704182-69704201 | Msa0699110:CDS | 45.0% | |
| TGTTTCCATTCTTTCGCGCA+AGG | + | chr4_4:69704303-69704322 | Msa0699110:CDS | 45.0% | |
| GTTTCCATTCTTTCGCGCAA+GGG | + | chr4_4:69704304-69704323 | Msa0699110:CDS | 45.0% | |
| TCAACATGTTCCACGCTTTC+AGG | - | chr4_4:69704409-69704428 | None:intergenic | 45.0% | |
| ! | TGAAAGCGTGGAACATGTTG+AGG | + | chr4_4:69704408-69704427 | Msa0699110:CDS | 45.0% |
| GGGCTTCAAATTAAGGTCAG+AGG | + | chr4_4:69704457-69704476 | Msa0699110:intron | 45.0% | |
| GGTTGAACTTGTGAACCATG+AGG | - | chr4_4:69704635-69704654 | None:intergenic | 45.0% | |
| !! | GCTTAGTTGGTTTGAGCATG+TGG | - | chr4_4:69705003-69705022 | None:intergenic | 45.0% |
| ! | GTTGTATGCAACGGAGTGTT+GGG | - | chr4_4:69705179-69705198 | None:intergenic | 45.0% |
| TGTTGTATGCAACGGAGTGT+TGG | - | chr4_4:69705180-69705199 | None:intergenic | 45.0% | |
| TCCGTTGCATACAACATTGC+TGG | + | chr4_4:69705184-69705203 | Msa0699110:intron | 45.0% | |
| GAGCCAAAAAGACTCAAAGG+TGG | - | chr4_4:69705327-69705346 | None:intergenic | 45.0% | |
| !!! | AGTCTTTTTGGCTCACTAGG+TGG | + | chr4_4:69705333-69705352 | Msa0699110:intron | 45.0% |
| !!! | GTCTTTTTGGCTCACTAGGT+GGG | + | chr4_4:69705334-69705353 | Msa0699110:intron | 45.0% |
| !!! | TCTTTTTGGCTCACTAGGTG+GGG | + | chr4_4:69705335-69705354 | Msa0699110:intron | 45.0% |
| CGCCGGTATTGCTCATAATA+AGG | + | chr4_4:69705726-69705745 | Msa0699110:intron | 45.0% | |
| AATAAGGCAAGCAGCATCCT+TGG | + | chr4_4:69705742-69705761 | Msa0699110:intron | 45.0% | |
| !! | TCAAGGACTAGTCCTAAGGA+AGG | - | chr4_4:69705803-69705822 | None:intergenic | 45.0% |
| !! | CAGCATCTGAAAAAAGCACC+AGG | - | chr4_4:69705859-69705878 | None:intergenic | 45.0% |
| !!! | CTGGTGCTTTTTTCAGATGC+TGG | + | chr4_4:69705857-69705876 | Msa0699110:intron | 45.0% |
| GTGCCACATTCATCTGTTGA+AGG | + | chr4_4:69705924-69705943 | Msa0699110:CDS | 45.0% | |
| ! | TTGGCTTTCAGGAAACAGCT+TGG | + | chr4_4:69706205-69706224 | Msa0699110:intron | 45.0% |
| AAACAGCTTGGAGGAAAGCT+GGG | + | chr4_4:69706217-69706236 | Msa0699110:CDS | 45.0% | |
| TATGCATGCATGTGCGTTCA+TGG | + | chr4_4:69706501-69706520 | Msa0699110:intron | 45.0% | |
| TTGTCTGCATAGCGATCTGT+AGG | + | chr4_4:69706546-69706565 | Msa0699110:intron | 45.0% | |
| AATCAGCGGAGAAGAAGTTG+AGG | + | chr4_4:69706632-69706651 | Msa0699110:CDS | 45.0% | |
| ATCAGCGGAGAAGAAGTTGA+GGG | + | chr4_4:69706633-69706652 | Msa0699110:CDS | 45.0% | |
| TTTCCAGAACCATGGCTCTT+GGG | - | chr4_4:69706669-69706688 | None:intergenic | 45.0% | |
| ! | TTTTCCAGAACCATGGCTCT+TGG | - | chr4_4:69706670-69706689 | None:intergenic | 45.0% |
| GCGATTGTCTTCAAAGCTTG+AGG | - | chr4_4:69706705-69706724 | None:intergenic | 45.0% | |
| GCATGCTAGAGCATATAAGG+TGG | + | chr4_4:69707095-69707114 | Msa0699110:intron | 45.0% | |
| TGGGACTACAAAGATCCAAG+AGG | + | chr4_4:69707313-69707332 | Msa0699110:CDS | 45.0% | |
| ! | ATAGAGTTAGGGCATCCTCT+TGG | - | chr4_4:69707331-69707350 | None:intergenic | 45.0% |
| CTAAAACCTGAAGGTGACGA+GGG | - | chr4_4:69707857-69707876 | None:intergenic | 45.0% | |
| ! | TCTAAAACCTGAAGGTGACG+AGG | - | chr4_4:69707858-69707877 | None:intergenic | 45.0% |
| TTGAGGCTATATGCTGAAGC+AGG | + | chr4_4:69707940-69707959 | Msa0699110:intron | 45.0% | |
| GAATGTCCTGAAGAAGACAC+AGG | + | chr4_4:69708006-69708025 | Msa0699110:CDS | 45.0% | |
| TTCACTCCTGTGTCTTCTTC+AGG | - | chr4_4:69708015-69708034 | None:intergenic | 45.0% | |
| ! | GATCTAGACACGCTTTTGGA+TGG | - | chr4_4:69708038-69708057 | None:intergenic | 45.0% |
| TACTGGGATCTAGTCCTGAT+AGG | + | chr4_4:69708216-69708235 | Msa0699110:intron | 45.0% | |
| TAAGCCAACTTTCTCATCCC+GGG | - | chr4_4:69708243-69708262 | None:intergenic | 45.0% | |
| AGAAATGCAGAAGGGCAGAA+CGG | + | chr4_4:69708314-69708333 | Msa0699110:intron | 45.0% | |
| AATGCTGAGTGGAGAGAGAA+GGG | + | chr4_4:69708410-69708429 | Msa0699110:intron | 45.0% | |
| ! | TCCCGACGACAATTTTGCAT+CGG | + | chr4_4:69709176-69709195 | Msa0699110:intron | 45.0% |
| TCCGATGCAAAATTGTCGTC+GGG | - | chr4_4:69709180-69709199 | None:intergenic | 45.0% | |
| CAGCAGTTGTCCCACATAAT+AGG | - | chr4_4:69709404-69709423 | Msa0699120:CDS | 45.0% | |
| GAACTTAACCATGTTGCAGG+TGG | - | chr4_4:69709637-69709656 | Msa0699120:CDS | 45.0% | |
| GGTTATGGAGGAACTTCAGT+TGG | - | chr4_4:69709659-69709678 | Msa0699120:CDS | 45.0% | |
| CTGAAGTTCCTCCATAACCT+TGG | + | chr4_4:69709660-69709679 | Msa0699110:intron | 45.0% | |
| ! | ATGGAAGCATAAGGACCTCA+TGG | - | chr4_4:69709792-69709811 | Msa0699120:CDS | 45.0% |
| ! | GTGATCCAGATGGAAGCATA+AGG | - | chr4_4:69709801-69709820 | Msa0699120:CDS | 45.0% |
| CTTCCATCTGGATCACCAAA+AGG | + | chr4_4:69709805-69709824 | Msa0699110:intron | 45.0% | |
| !! | AAGCCTTTTGGTGATCCAGA+TGG | - | chr4_4:69709811-69709830 | Msa0699120:CDS | 45.0% |
| ! | AGCTGTCACATGAAGCCTTT+TGG | - | chr4_4:69709823-69709842 | Msa0699120:CDS | 45.0% |
| GGAGAAGAAAAGACACGAGA+TGG | - | chr4_4:69709887-69709906 | Msa0699120:CDS | 45.0% | |
| !! | GTCACTGCTTTTGTTGGCAA+AGG | - | chr4_4:69710416-69710435 | Msa0699120:CDS | 45.0% |
| !! | ATGGTTCTCGTTTTGGTGGA+GGG | - | chr4_4:69710487-69710506 | Msa0699120:CDS | 45.0% |
| !! | AATGGTTCTCGTTTTGGTGG+AGG | - | chr4_4:69710488-69710507 | Msa0699120:CDS | 45.0% |
| ! | AGGAATGGTTCTCGTTTTGG+TGG | - | chr4_4:69710491-69710510 | Msa0699120:CDS | 45.0% |
| ACGAGAACCATTCCTTGAGT+TGG | + | chr4_4:69710496-69710515 | Msa0699110:intron | 45.0% | |
| !! | GAACCATTCCTTGAGTTGGT+AGG | + | chr4_4:69710500-69710519 | Msa0699110:intron | 45.0% |
| ATGCCTACCAACTCAAGGAA+TGG | - | chr4_4:69710506-69710525 | Msa0699120:CDS | 45.0% | |
| ATAGCATGCCTACCAACTCA+AGG | - | chr4_4:69710511-69710530 | Msa0699120:CDS | 45.0% | |
| TAGGCATGCTATAGACGTGA+GGG | + | chr4_4:69710519-69710538 | Msa0699110:intron | 45.0% | |
| AACTGTGCAGGAAGGTTCAT+AGG | + | chr4_4:69710572-69710591 | Msa0699110:intron | 45.0% | |
| ATAGGCTCAGACAACTCAAG+TGG | - | chr4_4:69710626-69710645 | Msa0699120:CDS | 45.0% | |
| ! | CTTGAGTTGTCTGAGCCTAT+TGG | + | chr4_4:69710626-69710645 | Msa0699110:intron | 45.0% |
| AGTTGTCTGAGCCTATTGGA+AGG | + | chr4_4:69710630-69710649 | Msa0699110:intron | 45.0% | |
| TGGGTTTGTGATGCAAATGG+TGG | + | chr4_4:69710700-69710719 | Msa0699110:intron | 45.0% | |
| AAGCTGAGGATCTAGGAAAG+TGG | + | chr4_4:69710744-69710763 | Msa0699110:intron | 45.0% | |
| ATGAGGGTCTTGAATGGTTG+AGG | + | chr4_4:69710796-69710815 | Msa0699110:intron | 45.0% | |
| TGAGGGTCTTGAATGGTTGA+GGG | + | chr4_4:69710797-69710816 | Msa0699110:intron | 45.0% | |
| TAGTCCATATCCTGAGCACT+AGG | + | chr4_4:69710872-69710891 | Msa0699110:intron | 45.0% | |
| AGTCCATATCCTGAGCACTA+GGG | + | chr4_4:69710873-69710892 | Msa0699110:intron | 45.0% | |
| ! | AGACATCTTCCAGGTGTTGT+GGG | + | chr4_4:69711032-69711051 | Msa0699110:intron | 45.0% |
| AGAGAATTTCAGGCCTTCTG+TGG | - | chr4_4:69711086-69711105 | Msa0699120:CDS | 45.0% | |
| ATGCCAAATCAAGTGGTTGC+AGG | - | chr4_4:69711130-69711149 | Msa0699120:CDS | 45.0% | |
| !! | TGCAACCACTTGATTTGGCA+TGG | + | chr4_4:69711129-69711148 | Msa0699110:intron | 45.0% |
| CCAAACCATGCCAAATCAAG+TGG | - | chr4_4:69711137-69711156 | Msa0699120:CDS | 45.0% | |
| !! | CCACTTGATTTGGCATGGTT+TGG | + | chr4_4:69711134-69711153 | Msa0699110:intron | 45.0% |
| AACACCTTCTGCCATTGTGT+CGG | + | chr4_4:69711186-69711205 | Msa0699110:intron | 45.0% | |
| !! | TGCTTTGGGCTCCTTTCTTT+TGG | - | chr4_4:69711379-69711398 | None:intergenic | 45.0% |
| TACGTGACTGACTGGAAATG+TGG | - | chr4_4:69711961-69711980 | None:intergenic | 45.0% | |
| ACTGTACTTACGTGACTGAC+TGG | - | chr4_4:69711969-69711988 | None:intergenic | 45.0% | |
| TTGTTCAGGGAGGATAGAAG+AGG | - | chr4_4:69712522-69712541 | None:intergenic | 45.0% | |
| AACTAGCATGACACAGTACC+CGG | - | chr4_4:69713555-69713574 | None:intergenic | 45.0% | |
| !! | GGATGTTGCCTTTTGATTCC+AGG | + | chr4_4:69713622-69713641 | Msa0699110:intron | 45.0% |
| TCCAGGAAATGAAGACAGGA+TGG | + | chr4_4:69713639-69713658 | Msa0699110:intron | 45.0% | |
| AGTGAGGCAATGCATACTTG+AGG | - | chr4_4:69713769-69713788 | None:intergenic | 45.0% | |
| !! | CTGGTTCAGTTTGCTGAACT+AGG | - | chr4_4:69713935-69713954 | None:intergenic | 45.0% |
| ! | CACTTTTCTTGGAGGTCAGA+CGG | + | chr4_4:69714030-69714049 | Msa0699110:intron | 45.0% |
| ATTTAGGCCCGCATAATAGC+TGG | - | chr4_4:69714148-69714167 | None:intergenic | 45.0% | |
| ATACAGCATGCCTTACACTC+AGG | - | chr4_4:69714200-69714219 | None:intergenic | 45.0% | |
| GTTTCAAGGTCCACATTGAG+AGG | - | chr4_4:69714274-69714293 | None:intergenic | 45.0% | |
| !! | CCTGCAGTATTGGTGACATT+AGG | - | chr4_4:69714883-69714902 | None:intergenic | 45.0% |
| CCTAATGTCACCAATACTGC+AGG | + | chr4_4:69714880-69714899 | Msa0699110:intron | 45.0% | |
| AGACTGAGATCCTGCAGTAT+TGG | - | chr4_4:69714893-69714912 | None:intergenic | 45.0% | |
| ! | AACTCGTCCTGAATTTCTGG+TGG | - | chr4_4:69715072-69715091 | None:intergenic | 45.0% |
| CGAAACTCGTCCTGAATTTC+TGG | - | chr4_4:69715075-69715094 | None:intergenic | 45.0% | |
| TTCAGGACGAGTTTCGAACA+TGG | + | chr4_4:69715079-69715098 | Msa0699110:CDS | 45.0% | |
| ACGAGTTTCGAACATGGCTT+AGG | + | chr4_4:69715085-69715104 | Msa0699110:CDS | 45.0% | |
| !! | TACATTAATTAAATTAAATT+GGG | - | chr4_4:69703844-69703863 | None:intergenic | 5.0% |
| !! | TTACATTAATTAAATTAAAT+TGG | - | chr4_4:69703845-69703864 | None:intergenic | 5.0% |
| !! | TTAAAAAAAATTAAAATTGA+AGG | + | chr4_4:69708789-69708808 | Msa0699110:intron | 5.0% |
| AGAGAGAGAGAGAGAGAGAG+AGG | + | chr4_4:69703682-69703701 | Msa0699110:five_prime_UTR | 50.0% | |
| ! | GAGAGAGAGAGAGAGGTATG+CGG | + | chr4_4:69703697-69703716 | Msa0699110:exon | 50.0% |
| ! | AGAGAGAGAGAGAGGTATGC+GGG | + | chr4_4:69703698-69703717 | Msa0699110:exon | 50.0% |
| GCGAGAAGAGAGAGTTGTGA+TGG | + | chr4_4:69703723-69703742 | Msa0699110:CDS | 50.0% | |
| GTAGGCAAGCCCCTTAAACT+TGG | - | chr4_4:69703901-69703920 | None:intergenic | 50.0% | |
| TACAACTCCTACAAAGGCGG+TGG | + | chr4_4:69703934-69703953 | Msa0699110:CDS | 50.0% | |
| AATCAAGCCACCGCCTTTGT+AGG | - | chr4_4:69703944-69703963 | None:intergenic | 50.0% | |
| AATGCGTGGCGATGAAGCAA+AGG | + | chr4_4:69704095-69704114 | Msa0699110:CDS | 50.0% | |
| AGCCTGCCCGCAAATTCAAT+TGG | + | chr4_4:69704119-69704138 | Msa0699110:CDS | 50.0% | |
| ! | TAGCTTTACCGCGTGCTACA+GGG | - | chr4_4:69704152-69704171 | None:intergenic | 50.0% |
| !! | TTAGCTTTACCGCGTGCTAC+AGG | - | chr4_4:69704153-69704172 | None:intergenic | 50.0% |
| !! | TTGTTTGAGCAGCATCGGTG+AGG | - | chr4_4:69704369-69704388 | None:intergenic | 50.0% |
| ACATGTTCCACGCTTTCAGG+AGG | - | chr4_4:69704406-69704425 | None:intergenic | 50.0% | |
| GAGGGTAGTCAAATGGCTAG+AGG | - | chr4_4:69704933-69704952 | None:intergenic | 50.0% | |
| AGAGTAGATCATGCGGAGGA+GGG | - | chr4_4:69704951-69704970 | None:intergenic | 50.0% | |
| ATGGAGAGTAGATCATGCGG+AGG | - | chr4_4:69704955-69704974 | None:intergenic | 50.0% | |
| TGGTGGAAACTCGGCTTAGT+TGG | - | chr4_4:69705016-69705035 | None:intergenic | 50.0% | |
| CGTCAGTTTACCAGCCAAAC+TGG | + | chr4_4:69705381-69705400 | Msa0699110:intron | 50.0% | |
| CCTGAGTTCGGCAACAATGA+AGG | - | chr4_4:69705671-69705690 | None:intergenic | 50.0% | |
| CCTTCATTGTTGCCGAACTC+AGG | + | chr4_4:69705668-69705687 | Msa0699110:CDS | 50.0% | |
| AAGCACCAGGCATACGTTAG+TGG | - | chr4_4:69705846-69705865 | None:intergenic | 50.0% | |
| !! | GGCACAACTGTTTGTTGTGC+AGG | - | chr4_4:69705909-69705928 | None:intergenic | 50.0% |
| GCTTTCAGGAAACAGCTTGG+AGG | + | chr4_4:69706208-69706227 | Msa0699110:intron | 50.0% | |
| GAAACAGCTTGGAGGAAAGC+TGG | + | chr4_4:69706216-69706235 | Msa0699110:CDS | 50.0% | |
| AACAGCTTGGAGGAAAGCTG+GGG | + | chr4_4:69706218-69706237 | Msa0699110:CDS | 50.0% | |
| GATCTTGGCATCAACACCGT+TGG | + | chr4_4:69706256-69706275 | Msa0699110:CDS | 50.0% | |
| AGCATTGCAGTACTTGGCTG+TGG | + | chr4_4:69706595-69706614 | Msa0699110:intron | 50.0% | |
| TGGCTGTGGAATATTGCGAG+AGG | + | chr4_4:69706609-69706628 | Msa0699110:CDS | 50.0% | |
| TCAGCGGAGAAGAAGTTGAG+GGG | + | chr4_4:69706634-69706653 | Msa0699110:CDS | 50.0% | |
| !! | GATGTTGCTGCTTTCAGCAG+CGG | + | chr4_4:69706777-69706796 | Msa0699110:intron | 50.0% |
| TGAACGCCTTGACTCTGACA+TGG | + | chr4_4:69707038-69707057 | Msa0699110:CDS | 50.0% | |
| ! | TGTGGTTCAGGTTCATCCTC+TGG | + | chr4_4:69707503-69707522 | Msa0699110:intron | 50.0% |
| !! | CATCCTCTGGCTCTTGACAT+AGG | + | chr4_4:69707516-69707535 | Msa0699110:intron | 50.0% |
| GATCCTATGTCAAGAGCCAG+AGG | - | chr4_4:69707522-69707541 | None:intergenic | 50.0% | |
| GATCTAGTCCTGATAGGACC+CGG | + | chr4_4:69708222-69708241 | Msa0699110:intron | 50.0% | |
| ATCTAGTCCTGATAGGACCC+GGG | + | chr4_4:69708223-69708242 | Msa0699110:intron | 50.0% | |
| GAAATGCAGAAGGGCAGAAC+GGG | + | chr4_4:69708315-69708334 | Msa0699110:intron | 50.0% | |
| GCAGAACGGGAATATCCACA+CGG | + | chr4_4:69708328-69708347 | Msa0699110:intron | 50.0% | |
| TGAGAGTGAGAGGTGGGAAA+CGG | + | chr4_4:69708352-69708371 | Msa0699110:intron | 50.0% | |
| GAATGCTGAGTGGAGAGAGA+AGG | + | chr4_4:69708409-69708428 | Msa0699110:intron | 50.0% | |
| CATGTTGCAGGTGGACATGT+TGG | - | chr4_4:69709628-69709647 | Msa0699120:CDS | 50.0% | |
| CAACATGTCCACCTGCAACA+TGG | + | chr4_4:69709626-69709645 | Msa0699110:intron | 50.0% | |
| TGATTTCCTCTGCAGCCATG+AGG | + | chr4_4:69709774-69709793 | Msa0699110:intron | 50.0% | |
| GAGGTCCTTATGCTTCCATC+TGG | + | chr4_4:69709793-69709812 | Msa0699110:intron | 50.0% | |
| ! | GATGACAGAGCATCAGTGGT+CGG | - | chr4_4:69709970-69709989 | Msa0699120:CDS | 50.0% |
| ! | ACAGGATGACAGAGCATCAG+TGG | - | chr4_4:69709974-69709993 | Msa0699120:intron | 50.0% |
| !! | GGGAGTGTCGGAATTCAACA+AGG | - | chr4_4:69710438-69710457 | Msa0699120:CDS | 50.0% |
| ! | AGATGGAGGTATGGGAGTGT+CGG | - | chr4_4:69710450-69710469 | Msa0699120:CDS | 50.0% |
| ! | ATGGAGGGAGATGGAGGTAT+GGG | - | chr4_4:69710458-69710477 | Msa0699120:CDS | 50.0% |
| ! | TTTTGGTGGAGGGGATGAGA+TGG | - | chr4_4:69710477-69710496 | Msa0699120:CDS | 50.0% |
| !! | TGGTTCTCGTTTTGGTGGAG+GGG | - | chr4_4:69710486-69710505 | Msa0699120:CDS | 50.0% |
| GTAGGCATGCTATAGACGTG+AGG | + | chr4_4:69710518-69710537 | Msa0699110:intron | 50.0% | |
| TAGACGTGAGGGAGAGATTG+AGG | + | chr4_4:69710530-69710549 | Msa0699110:intron | 50.0% | |
| ! | TGAGGCAATTCTCTAAGGGC+CGG | + | chr4_4:69710548-69710567 | Msa0699110:intron | 50.0% |
| GAACCTTCCTGCACAGTTTC+CGG | - | chr4_4:69710570-69710589 | Msa0699120:CDS | 50.0% | |
| ! | GAGACATCTTCCAGGTGTTG+TGG | + | chr4_4:69711031-69711050 | Msa0699110:intron | 50.0% |
| TCATCACAACCCACAACACC+TGG | - | chr4_4:69711044-69711063 | Msa0699120:CDS | 50.0% | |
| GAATTTCAGGCCTTCTGTGG+AGG | - | chr4_4:69711083-69711102 | Msa0699120:CDS | 50.0% | |
| GATTCCGACACAATGGCAGA+AGG | - | chr4_4:69711193-69711212 | Msa0699120:CDS | 50.0% | |
| ACTAGCATGACACAGTACCC+GGG | - | chr4_4:69713554-69713573 | None:intergenic | 50.0% | |
| GCCATCCTGTCTTCATTTCC+TGG | - | chr4_4:69713643-69713662 | None:intergenic | 50.0% | |
| TGCAAAGGAAGGATCCAGGA+TGG | + | chr4_4:69713854-69713873 | Msa0699110:intron | 50.0% | |
| GCAAAGGAAGGATCCAGGAT+GGG | + | chr4_4:69713855-69713874 | Msa0699110:intron | 50.0% | |
| TAGCAGCACATAACCCATCC+TGG | - | chr4_4:69713871-69713890 | None:intergenic | 50.0% | |
| CCTTCTGGCCAGCTATTATG+CGG | + | chr4_4:69714137-69714156 | Msa0699110:intron | 50.0% | |
| CTTCTGGCCAGCTATTATGC+GGG | + | chr4_4:69714138-69714157 | Msa0699110:intron | 50.0% | |
| ACATGTGAAGACTGCGAACC+AGG | - | chr4_4:69714390-69714409 | None:intergenic | 50.0% | |
| TGGTTCGCAGTCTTCACATG+TGG | + | chr4_4:69714389-69714408 | Msa0699110:intron | 50.0% | |
| GGTTCGCAGTCTTCACATGT+GGG | + | chr4_4:69714390-69714409 | Msa0699110:intron | 50.0% | |
| AACAGGCACAAAGGAATCCC+AGG | - | chr4_4:69714523-69714542 | None:intergenic | 50.0% | |
| !! | TCAAGTTGAGATGCCAGCTG+AGG | + | chr4_4:69714939-69714958 | Msa0699110:CDS | 50.0% |
| ! | CAAGTTGAGATGCCAGCTGA+GGG | + | chr4_4:69714940-69714959 | Msa0699110:CDS | 50.0% |
| AAGTTGAGATGCCAGCTGAG+GGG | + | chr4_4:69714941-69714960 | Msa0699110:CDS | 50.0% | |
| TTTGTATCAACCCCCTCAGC+TGG | - | chr4_4:69714955-69714974 | None:intergenic | 50.0% | |
| CGGCCTAATGTGGTTAAACG+AGG | + | chr4_4:69715117-69715136 | Msa0699110:CDS | 50.0% | |
| GTTCAAGTCCCTGTAGCACG+CGG | + | chr4_4:69704141-69704160 | Msa0699110:CDS | 55.0% | |
| TCGACCCTTGCGCGAAAGAA+TGG | - | chr4_4:69704311-69704330 | None:intergenic | 55.0% | |
| GGAAACTCCTCCTGAAAGCG+TGG | + | chr4_4:69704396-69704415 | Msa0699110:CDS | 55.0% | |
| TGCGGAGGAGGGTAGTCAAA+TGG | - | chr4_4:69704940-69704959 | None:intergenic | 55.0% | |
| GAGAGTAGATCATGCGGAGG+AGG | - | chr4_4:69704952-69704971 | None:intergenic | 55.0% | |
| ! | GAGACATGGGCTGACCAGTT+TGG | - | chr4_4:69705398-69705417 | None:intergenic | 55.0% |
| ! | GGGGTATGACGAGAGCATGT+AGG | + | chr4_4:69705500-69705519 | Msa0699110:intron | 55.0% |
| ACAGAATTCACGTGCTCCGC+CGG | + | chr4_4:69705709-69705728 | Msa0699110:intron | 55.0% | |
| AGTGGCCACTAACGTATGCC+TGG | + | chr4_4:69705838-69705857 | Msa0699110:intron | 55.0% | |
| CGACTACTTCCCAAGAGCCA+TGG | + | chr4_4:69706657-69706676 | Msa0699110:CDS | 55.0% | |
| CTTCCCAAGAGCCATGGTTC+TGG | + | chr4_4:69706663-69706682 | Msa0699110:CDS | 55.0% | |
| GTCTTCAAAGCTTGAGGCCC+AGG | - | chr4_4:69706699-69706718 | None:intergenic | 55.0% | |
| TTCTCATCCCGGGTCCTATC+AGG | - | chr4_4:69708233-69708252 | None:intergenic | 55.0% | |
| AGGACCCGGGATGAGAAAGT+TGG | + | chr4_4:69708236-69708255 | Msa0699110:intron | 55.0% | |
| GAGAGTGAGAGGTGGGAAAC+GGG | + | chr4_4:69708353-69708372 | Msa0699110:intron | 55.0% | |
| TAAGGACCTCATGGCTGCAG+AGG | - | chr4_4:69709783-69709802 | Msa0699120:CDS | 55.0% | |
| GATGGAGGGAGATGGAGGTA+TGG | - | chr4_4:69710459-69710478 | Msa0699120:CDS | 55.0% | |
| GATGAGATGGAGGGAGATGG+AGG | - | chr4_4:69710464-69710483 | Msa0699120:CDS | 55.0% | |
| GGACCCTAGTGCTCAGGATA+TGG | - | chr4_4:69710879-69710898 | Msa0699120:CDS | 55.0% | |
| TAGCATGACACAGTACCCGG+GGG | - | chr4_4:69713552-69713571 | None:intergenic | 55.0% | |
| CTAGCATGACACAGTACCCG+GGG | - | chr4_4:69713553-69713572 | None:intergenic | 55.0% | |
| CCGCATAATAGCTGGCCAGA+AGG | - | chr4_4:69714140-69714159 | None:intergenic | 55.0% | |
| ! | AGACAGGGTGCCTGAGTGTA+AGG | + | chr4_4:69714187-69714206 | Msa0699110:intron | 55.0% |
| GGGGGAACCTCCGAATTGAA+GGG | - | chr4_4:69714606-69714625 | None:intergenic | 55.0% | |
| AGGGGGAACCTCCGAATTGA+AGG | - | chr4_4:69714607-69714626 | None:intergenic | 55.0% | |
| AGTTGAGATGCCAGCTGAGG+GGG | + | chr4_4:69714942-69714961 | Msa0699110:CDS | 55.0% | |
| TGCCTCAAGGAAGCCAAGCT+TGG | + | chr4_4:69715001-69715020 | Msa0699110:CDS | 55.0% | |
| CTCCAAGCTTGGCTTCCTTG+AGG | - | chr4_4:69715006-69715025 | None:intergenic | 55.0% | |
| CATGGCTTAGGCCTCGTAAG+CGG | + | chr4_4:69715097-69715116 | Msa0699110:CDS | 55.0% | |
| ACCACATTAGGCCGCTTACG+AGG | - | chr4_4:69715111-69715130 | None:intergenic | 55.0% | |
| ! | GAGAGAGAGAGGTATGCGGG+TGG | + | chr4_4:69703701-69703720 | Msa0699110:exon | 60.0% |
| ! | CATGGGCTGACCAGTTTGGC+TGG | - | chr4_4:69705394-69705413 | None:intergenic | 60.0% |
| GTTGCACCCTCGTCACCTTC+AGG | + | chr4_4:69707848-69707867 | Msa0699110:CDS | 60.0% | |
| TCCACACGGCTGAGAGTGAG+AGG | + | chr4_4:69708342-69708361 | Msa0699110:intron | 60.0% | |
| ACCTCTCACTCTCAGCCGTG+TGG | - | chr4_4:69708346-69708365 | None:intergenic | 60.0% | |
| ACACGGCTGAGAGTGAGAGG+TGG | + | chr4_4:69708345-69708364 | Msa0699110:intron | 60.0% | |
| CACGGCTGAGAGTGAGAGGT+GGG | + | chr4_4:69708346-69708365 | Msa0699110:intron | 60.0% | |
| GGGGATGAGATGGAGGGAGA+TGG | - | chr4_4:69710467-69710486 | Msa0699120:CDS | 60.0% | |
| GGTGGAGGGGATGAGATGGA+GGG | - | chr4_4:69710473-69710492 | Msa0699120:CDS | 60.0% | |
| TGGTGGAGGGGATGAGATGG+AGG | - | chr4_4:69710474-69710493 | Msa0699120:CDS | 60.0% | |
| CTAAGGGCCGGAAACTGTGC+AGG | + | chr4_4:69710560-69710579 | Msa0699110:intron | 60.0% | |
| GAGTTGGGACCCTAGTGCTC+AGG | - | chr4_4:69710885-69710904 | Msa0699120:CDS | 60.0% | |
| ATCCTCCCTTGTGACTCCCC+CGG | + | chr4_4:69713533-69713552 | Msa0699110:CDS | 60.0% | |
| AGTACCCGGGGGAGTCACAA+GGG | - | chr4_4:69713541-69713560 | None:intergenic | 60.0% | |
| CTTCACATGTGGGCGTGCAG+TGG | + | chr4_4:69714400-69714419 | Msa0699110:intron | 60.0% | |
| GCCTCGTAAGCGGCCTAATG+TGG | + | chr4_4:69715107-69715126 | Msa0699110:CDS | 60.0% | |
| GGGCCGGAAACTGTGCAGGA+AGG | + | chr4_4:69710564-69710583 | Msa0699110:intron | 65.0% | |
| TCCTCCCTTGTGACTCCCCC+GGG | + | chr4_4:69713534-69713553 | Msa0699110:CDS | 65.0% | |
| CAGTACCCGGGGGAGTCACA+AGG | - | chr4_4:69713542-69713561 | None:intergenic | 65.0% | |
| ACCCGGGGGAGTCACAAGGG+AGG | - | chr4_4:69713538-69713557 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 69703681 | 69715357 | 69703681 | ID=Msa0699110;Name=Msa0699110 |
| chr4_4 | mRNA | 69703681 | 69715357 | 69703681 | ID=Msa0699110-mRNA-1;Parent=Msa0699110;Name=Msa0699110-mRNA-1;_AED=0.14;_eAED=0.14;_QI=33|0.93|0.93|1|0.93|1|16|175|677 |
| chr4_4 | exon | 69703681 | 69703789 | 69703681 | ID=Msa0699110-mRNA-1:exon:20945;Parent=Msa0699110-mRNA-1 |
| chr4_4 | exon | 69703881 | 69704001 | 69703881 | ID=Msa0699110-mRNA-1:exon:20946;Parent=Msa0699110-mRNA-1 |
| chr4_4 | exon | 69704092 | 69704203 | 69704092 | ID=Msa0699110-mRNA-1:exon:20947;Parent=Msa0699110-mRNA-1 |
| chr4_4 | exon | 69704301 | 69704471 | 69704301 | ID=Msa0699110-mRNA-1:exon:20948;Parent=Msa0699110-mRNA-1 |
| chr4_4 | exon | 69705583 | 69705696 | 69705583 | ID=Msa0699110-mRNA-1:exon:20949;Parent=Msa0699110-mRNA-1 |
| chr4_4 | exon | 69705873 | 69705976 | 69705873 | ID=Msa0699110-mRNA-1:exon:20950;Parent=Msa0699110-mRNA-1 |
| chr4_4 | exon | 69706216 | 69706335 | 69706216 | ID=Msa0699110-mRNA-1:exon:20951;Parent=Msa0699110-mRNA-1 |
| chr4_4 | exon | 69706605 | 69706728 | 69706605 | ID=Msa0699110-mRNA-1:exon:20952;Parent=Msa0699110-mRNA-1 |
| chr4_4 | exon | 69707000 | 69707113 | 69707000 | ID=Msa0699110-mRNA-1:exon:20953;Parent=Msa0699110-mRNA-1 |
| chr4_4 | exon | 69707257 | 69707469 | 69707257 | ID=Msa0699110-mRNA-1:exon:20954;Parent=Msa0699110-mRNA-1 |
| chr4_4 | exon | 69707761 | 69707869 | 69707761 | ID=Msa0699110-mRNA-1:exon:20955;Parent=Msa0699110-mRNA-1 |
| chr4_4 | exon | 69707962 | 69708062 | 69707962 | ID=Msa0699110-mRNA-1:exon:20956;Parent=Msa0699110-mRNA-1 |
| chr4_4 | exon | 69713486 | 69713555 | 69713486 | ID=Msa0699110-mRNA-1:exon:20957;Parent=Msa0699110-mRNA-1 |
| chr4_4 | exon | 69713644 | 69713771 | 69713644 | ID=Msa0699110-mRNA-1:exon:20958;Parent=Msa0699110-mRNA-1 |
| chr4_4 | exon | 69714721 | 69714796 | 69714721 | ID=Msa0699110-mRNA-1:exon:20959;Parent=Msa0699110-mRNA-1 |
| chr4_4 | exon | 69714902 | 69715357 | 69714902 | ID=Msa0699110-mRNA-1:exon:20960;Parent=Msa0699110-mRNA-1 |
| chr4_4 | five_prime_UTR | 69703681 | 69703713 | 69703681 | ID=Msa0699110-mRNA-1:five_prime_utr;Parent=Msa0699110-mRNA-1 |
| chr4_4 | CDS | 69703714 | 69703789 | 69703714 | ID=Msa0699110-mRNA-1:cds;Parent=Msa0699110-mRNA-1 |
| chr4_4 | CDS | 69703881 | 69704001 | 69703881 | ID=Msa0699110-mRNA-1:cds;Parent=Msa0699110-mRNA-1 |
| chr4_4 | CDS | 69704092 | 69704203 | 69704092 | ID=Msa0699110-mRNA-1:cds;Parent=Msa0699110-mRNA-1 |
| chr4_4 | CDS | 69704301 | 69704471 | 69704301 | ID=Msa0699110-mRNA-1:cds;Parent=Msa0699110-mRNA-1 |
| chr4_4 | CDS | 69705583 | 69705696 | 69705583 | ID=Msa0699110-mRNA-1:cds;Parent=Msa0699110-mRNA-1 |
| chr4_4 | CDS | 69705873 | 69705976 | 69705873 | ID=Msa0699110-mRNA-1:cds;Parent=Msa0699110-mRNA-1 |
| chr4_4 | CDS | 69706216 | 69706335 | 69706216 | ID=Msa0699110-mRNA-1:cds;Parent=Msa0699110-mRNA-1 |
| chr4_4 | CDS | 69706605 | 69706728 | 69706605 | ID=Msa0699110-mRNA-1:cds;Parent=Msa0699110-mRNA-1 |
| chr4_4 | CDS | 69707000 | 69707113 | 69707000 | ID=Msa0699110-mRNA-1:cds;Parent=Msa0699110-mRNA-1 |
| chr4_4 | CDS | 69707257 | 69707469 | 69707257 | ID=Msa0699110-mRNA-1:cds;Parent=Msa0699110-mRNA-1 |
| chr4_4 | CDS | 69707761 | 69707869 | 69707761 | ID=Msa0699110-mRNA-1:cds;Parent=Msa0699110-mRNA-1 |
| chr4_4 | CDS | 69707962 | 69708062 | 69707962 | ID=Msa0699110-mRNA-1:cds;Parent=Msa0699110-mRNA-1 |
| chr4_4 | CDS | 69713486 | 69713555 | 69713486 | ID=Msa0699110-mRNA-1:cds;Parent=Msa0699110-mRNA-1 |
| chr4_4 | CDS | 69713644 | 69713771 | 69713644 | ID=Msa0699110-mRNA-1:cds;Parent=Msa0699110-mRNA-1 |
| chr4_4 | CDS | 69714721 | 69714796 | 69714721 | ID=Msa0699110-mRNA-1:cds;Parent=Msa0699110-mRNA-1 |
| chr4_4 | CDS | 69714902 | 69715182 | 69714902 | ID=Msa0699110-mRNA-1:cds;Parent=Msa0699110-mRNA-1 |
| chr4_4 | three_prime_UTR | 69715183 | 69715357 | 69715183 | ID=Msa0699110-mRNA-1:three_prime_utr;Parent=Msa0699110-mRNA-1 |
| Gene Sequence |
| Protein sequence |