AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0036140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0036140 MtrunA17_Chr1g0198281 96.204 1080 36 3 1 1077 1 1078 0.0 2155
Msa0036140 MtrunA17_Chr1g0205401 33.721 258 161 3 814 1062 210 466 8.64e-40 154
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0036140 AT3G22430.1 33.205 259 159 5 814 1063 253 506 2.66e-36 145

Find 321 sgRNAs with CRISPR-Local

Find 471 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGTTTCTGATACCTTCTT+TGG 0.153676 1_1:-64548329 None:intergenic
CTTATGTATGAACATCTATT+TGG 0.184429 1_1:+64551053 Msa0036140:three_prime_UTR
CATCAGACATTGAAATATTA+TGG 0.194619 1_1:-64549984 None:intergenic
ATATTCCTCTGCCCAATTTC+AGG 0.199663 1_1:-64547085 None:intergenic
ACTTCTCACTTGAGGGATTA+TGG 0.231283 1_1:+64546899 Msa0036140:CDS
GATATCACCTCAAGTTTCTA+TGG 0.245398 1_1:+64547990 Msa0036140:CDS
ACTAGTAGGGGTCCTGAAAT+TGG 0.249442 1_1:+64547073 Msa0036140:CDS
AAAAGGAGGATTTGATTCTT+TGG 0.251535 1_1:+64549944 Msa0036140:CDS
TGCTGACGACGACGAAAATT+TGG 0.259945 1_1:+64546235 Msa0036140:CDS
AAAGAATCAAATCCTCCTTT+TGG 0.267139 1_1:-64549942 None:intergenic
CCATTAGGAGCTACCCTTCT+AGG 0.271871 1_1:-64547226 None:intergenic
TAGCTCTCATCCCAGCCTTA+TGG 0.274500 1_1:-64549807 None:intergenic
TATGCTGCCTGTATATCTTA+TGG 0.277887 1_1:-64547915 None:intergenic
TGATTATGAAGTTTCATATC+TGG 0.278807 1_1:+64547525 Msa0036140:CDS
CTTGGGCACATTTGTTGGGC+TGG 0.303602 1_1:+64550430 Msa0036140:CDS
TGTAAAATCCTTTGCGTAAG+AGG 0.311586 1_1:-64546873 None:intergenic
TACTATTCTGGTGAAGTTCT+TGG 0.313599 1_1:+64550412 Msa0036140:CDS
CTTGCCCCATGCTGAAGCTT+TGG 0.318142 1_1:+64549918 Msa0036140:CDS
TAGGTTCAGATTCAAGTTCT+TGG 0.323338 1_1:-64548301 None:intergenic
AGTACTTCACCATCAACTTC+AGG 0.328370 1_1:+64546167 Msa0036140:CDS
AAACTGGAAGGTTATAAGTA+TGG 0.336011 1_1:+64550017 Msa0036140:CDS
TAGATTTCAATAGCAAGAAT+TGG 0.337717 1_1:+64550627 Msa0036140:CDS
ATTCGGGTCCTGACCCGTTT+AGG 0.341102 1_1:+64545913 Msa0036140:CDS
ATGAAACGTGTTTATCTTGA+TGG 0.341588 1_1:+64546260 Msa0036140:CDS
TCTCGAAGAGATGGCGCTCC+AGG 0.342353 1_1:+64547598 Msa0036140:CDS
ACGAACATCTATTTCTTCAT+TGG 0.343129 1_1:-64547764 None:intergenic
AAGTTCTTGGGCACATTTGT+TGG 0.346615 1_1:+64550425 Msa0036140:CDS
GGTAAGAGTGAAGATTATTA+TGG 0.347319 1_1:+64547337 Msa0036140:CDS
CTTTCCCACACATGTATTCA+TGG 0.350550 1_1:-64551004 None:intergenic
AACATCAATTCAATCAAAAC+AGG 0.351689 1_1:+64547444 Msa0036140:CDS
TCATGCATAATATCCCTTCT+TGG 0.354699 1_1:-64547364 None:intergenic
GGTGATGGCTATTTGCGTTC+TGG 0.360484 1_1:+64547466 Msa0036140:CDS
CTCAGAGCCCTCAGTTGGCT+CGG 0.366081 1_1:-64548238 None:intergenic
AGTTAGCAGTTCTTGTATAC+AGG 0.367677 1_1:+64550805 Msa0036140:three_prime_UTR
TACCCAGCAAAGGGTTGATT+CGG 0.372041 1_1:+64545896 Msa0036140:CDS
CTGTAATGGAGTATGATAAC+AGG 0.372044 1_1:+64547269 Msa0036140:CDS
GAATCCCACGGTGGAGGAAC+AGG 0.375778 1_1:+64546626 Msa0036140:CDS
AAATTGGGCAGAGGAATATT+AGG 0.376917 1_1:+64547089 Msa0036140:CDS
CTGATGACAATCCTCAAAAC+TGG 0.376922 1_1:+64550001 Msa0036140:CDS
GAATCCCACGGTGAGGGAAC+AGG 0.376937 1_1:+64546713 Msa0036140:CDS
ATATTCATCTTGTGCTGCTC+TGG 0.379815 1_1:-64547182 None:intergenic
TCATTTAAATACAAGGGTTA+AGG 0.384541 1_1:+64550935 Msa0036140:three_prime_UTR
AGAGGGAGATAATGTGGAAT+AGG 0.386699 1_1:-64546855 None:intergenic
GACCCGAATCAACCCTTTGC+TGG 0.389412 1_1:-64545899 None:intergenic
TTGGGCACATTTGTTGGGCT+GGG 0.390607 1_1:+64550431 Msa0036140:CDS
CCACCATGGGATTCTGTAAT+GGG 0.391737 1_1:-64546530 None:intergenic
CAGGAAGGATATTGATGATC+TGG 0.394028 1_1:+64550664 Msa0036140:CDS
CCTTTGCTGGGTACGCAACT+TGG 0.395916 1_1:-64545886 None:intergenic
TATGAAACTTCATAATCATT+TGG 0.397981 1_1:-64547520 None:intergenic
TGCTGAAGCTTTGGCCCAAA+AGG 0.398735 1_1:+64549927 Msa0036140:CDS
CCACCGTGGGATTCTGTAAT+GGG 0.399704 1_1:-64546617 None:intergenic
TGTGGCAATTGCAGAGGACT+TGG 0.400070 1_1:+64550598 Msa0036140:CDS
GATTTGATTGAAAGCAGATT+AGG 0.400639 1_1:+64546290 Msa0036140:CDS
AGCTCTCATCCCAGCCTTAT+GGG 0.401015 1_1:-64549806 None:intergenic
CAAAGCAATATGTGTTATGA+TGG 0.402079 1_1:+64549846 Msa0036140:CDS
AATATCTTTCTGATAGCAAC+CGG 0.402101 1_1:+64550474 Msa0036140:CDS
TCATAGTCCAATCGACCATT+AGG 0.402690 1_1:-64547241 None:intergenic
AAGTTCATATAGGTCTATTC+CGG 0.403247 1_1:+64546367 Msa0036140:CDS
GTTCATACATAAGCTAACTA+TGG 0.405200 1_1:-64551043 None:intergenic
AGATGATGAAGACATGAATA+TGG 0.405985 1_1:+64547864 Msa0036140:CDS
TAACTATGGAGGGAACAAAT+TGG 0.409036 1_1:-64551029 None:intergenic
AGCAAAAGGGGTGGTGGTGA+TGG 0.410695 1_1:+64546020 Msa0036140:CDS
TGCAGACCAAAGTACTATTC+TGG 0.411266 1_1:+64550400 Msa0036140:CDS
TTGAGAAGTGAAAATGAAGT+TGG 0.411832 1_1:+64546344 Msa0036140:CDS
TATAGGTCTATTCCGGATAC+TGG 0.412175 1_1:+64546374 Msa0036140:CDS
GCAGAAGGTGCAGGGTTTAG+TGG 0.417580 1_1:+64547025 Msa0036140:CDS
CAGTTCCTCAAAGGAATTCA+TGG 0.417940 1_1:+64549750 Msa0036140:intron
AGTATGATGATATACCTAGA+AGG 0.418639 1_1:+64547212 Msa0036140:CDS
GGACGAATCAAATTATGCTT+AGG 0.419599 1_1:+64550371 Msa0036140:CDS
TTACCAGTTCTATCTAAATC+TGG 0.419998 1_1:-64547319 None:intergenic
CAAAGTCTAGTTCATCAAAC+TGG 0.423080 1_1:+64548076 Msa0036140:CDS
AACCTTTCTTGCTGATGCCC+TGG 0.424265 1_1:-64547616 None:intergenic
ACTATTCTGGTGAAGTTCTT+GGG 0.424626 1_1:+64550413 Msa0036140:CDS
TACAGGTACTTCTCACTTGA+GGG 0.428689 1_1:+64546892 Msa0036140:CDS
TCACGACGGTTTCTCCTAAA+CGG 0.429363 1_1:-64545927 None:intergenic
TCAGGGTTGAGACCTAGATA+TGG 0.430452 1_1:+64546185 Msa0036140:CDS
AGTTCTTGGGCACATTTGTT+GGG 0.431898 1_1:+64550426 Msa0036140:CDS
TGTTATTTCATTTAAATACA+AGG 0.435022 1_1:+64550928 Msa0036140:three_prime_UTR
CCAGCTGGCACACTCCTTGA+CGG 0.438403 1_1:-64546452 None:intergenic
ACAATTGAGGCGTTTATAAG+AGG 0.441319 1_1:+64550042 Msa0036140:CDS
GATCCAACCATAAGATATAC+AGG 0.441421 1_1:+64547908 Msa0036140:CDS
GAGTTGGCAGTGGTAGCAAA+AGG 0.443006 1_1:+64546006 Msa0036140:CDS
AATGTGAGTTAAGTCCTTCC+AGG 0.443209 1_1:+64547122 Msa0036140:CDS
GTGGATGGAGTTAGAAGAGT+TGG 0.443260 1_1:+64545990 Msa0036140:CDS
TTCTGATACCTTCTTTGGAC+AGG 0.443740 1_1:-64548324 None:intergenic
CTAGTAGGGGTCCTGAAATT+GGG 0.443796 1_1:+64547074 Msa0036140:CDS
CTTCAGCATGGGGCAAGACC+TGG 0.444206 1_1:-64549912 None:intergenic
TTGAAGGGAGGGATTCTGAT+TGG 0.445016 1_1:+64546045 Msa0036140:CDS
TCACCGTGGGATTCTGTGAT+GGG 0.447702 1_1:-64546704 None:intergenic
CTCACCGTGGGATTCTGTGA+TGG 0.451047 1_1:-64546705 None:intergenic
CCCACCATGGGATTCTGTAA+TGG 0.451138 1_1:-64546531 None:intergenic
CGTCCAGATTTAGATAGAAC+TGG 0.451984 1_1:+64547316 Msa0036140:CDS
GGCCACCTATAGACACTAGT+AGG 0.456470 1_1:+64547059 Msa0036140:CDS
AAATACAATGAGTTGGAGAA+TGG 0.462746 1_1:+64547943 Msa0036140:CDS
TTCTAGGTATATCATCATAC+TGG 0.464627 1_1:-64547210 None:intergenic
TATGTTGGATCCTGCGATGC+AGG 0.466035 1_1:-64547397 None:intergenic
GGTCTCAACCCTGAAGTTGA+TGG 0.468413 1_1:-64546176 None:intergenic
TCCACCGTGGGATTCTGTAA+TGG 0.470224 1_1:-64546618 None:intergenic
CTCCAGGGCATCAGCAAGAA+AGG 0.470589 1_1:+64547614 Msa0036140:CDS
GATTCTGATTGGCATTTGAA+TGG 0.473068 1_1:+64546056 Msa0036140:CDS
ATCACTCCTCCTCGTTTCCA+TGG 0.474968 1_1:-64546930 None:intergenic
TACTTCTGAAATCGAAATGA+TGG 0.474975 1_1:-64548027 None:intergenic
CCACTATGGGATTGTGTGAT+GGG 0.475618 1_1:-64546791 None:intergenic
TAGTGTCTATAGGTGGCCTT+TGG 0.475715 1_1:-64547054 None:intergenic
GATATTTGATGATATGCCTC+TGG 0.476891 1_1:-64547553 None:intergenic
TGTTTATCTTGATGGAGATA+AGG 0.477076 1_1:+64546268 Msa0036140:CDS
GGAAAACTTGCAGAAGGTGC+AGG 0.477723 1_1:+64547016 Msa0036140:CDS
CCGTCAAGGAGTGTGCCAGC+TGG 0.478784 1_1:+64546452 Msa0036140:CDS
GACGAATCAAATTATGCTTA+GGG 0.479482 1_1:+64550372 Msa0036140:CDS
CACGACGGTTTCTCCTAAAC+GGG 0.481176 1_1:-64545926 None:intergenic
ACCCAGCAAAGGGTTGATTC+GGG 0.481562 1_1:+64545897 Msa0036140:CDS
TTCAGCATGGGGCAAGACCT+GGG 0.482729 1_1:-64549911 None:intergenic
CCTAGAAGGGTAGCTCCTAA+TGG 0.486860 1_1:+64547226 Msa0036140:CDS
AGAACTGCTAACTTAAGTAT+AGG 0.487013 1_1:-64550795 None:intergenic
AGAATAGTACTTTGGTCTGC+AGG 0.487298 1_1:-64550398 None:intergenic
TAACATTGAAGAGACAGATC+AGG 0.487630 1_1:+64550544 Msa0036140:CDS
GGACCCCTACTAGTGTCTAT+AGG 0.487836 1_1:-64547064 None:intergenic
TCATGATAGTCTACATATGT+TGG 0.489317 1_1:-64547412 None:intergenic
GGACTATGAGCAAGCTGTAA+TGG 0.491273 1_1:+64547255 Msa0036140:CDS
TTTAGGAGAAACCGTCGTGA+TGG 0.491905 1_1:+64545930 Msa0036140:CDS
CTGTTGATCAAATGAGGAAA+AGG 0.494442 1_1:+64546114 Msa0036140:CDS
TACAGTAACCTGGGTTCCCC+AGG 0.495394 1_1:+64549894 Msa0036140:CDS
GGATATTGATGATCTGGATA+AGG 0.498399 1_1:+64550670 Msa0036140:CDS
CAGGGAGATTTGAGCATGAA+AGG 0.498596 1_1:+64546645 Msa0036140:CDS
TTTGGGCCAAAGCTTCAGCA+TGG 0.500106 1_1:-64549924 None:intergenic
TTAGGAGAAACCGTCGTGAT+GGG 0.500425 1_1:+64545931 Msa0036140:CDS
AAGGACTTAACTCACATTGA+TGG 0.501202 1_1:-64547117 None:intergenic
TCAGAGCCCTCAGTTGGCTC+GGG 0.502509 1_1:-64548237 None:intergenic
CCCATCACACAATCCCATAG+TGG 0.503039 1_1:+64546791 Msa0036140:CDS
CGTCAAGGAGTGTGCCAGCT+GGG 0.504102 1_1:+64546453 Msa0036140:CDS
ACTTCACCAGAATAGTACTT+TGG 0.504806 1_1:-64550406 None:intergenic
CAAGTGGTAGGGTTCAATCT+AGG 0.504955 1_1:+64546084 Msa0036140:CDS
ACACTTACACCACCAGTATC+CGG 0.506546 1_1:-64546386 None:intergenic
TAAGAATAAATACAATGAGT+TGG 0.509334 1_1:+64547936 Msa0036140:CDS
TCATCAATTGTGGATGGCCT+TGG 0.509510 1_1:-64550973 None:intergenic
GCAGTTCTTGTATACAGGAC+AGG 0.510407 1_1:+64550810 Msa0036140:three_prime_UTR
CTGGGAGATTTGAGCATGAA+AGG 0.510967 1_1:+64546471 Msa0036140:CDS
GCATAACCACCCTGCATCGC+AGG 0.511022 1_1:+64547387 Msa0036140:CDS
CCCACTATGGGATTGTGTGA+TGG 0.512039 1_1:-64546792 None:intergenic
CACTCTGCCAGCTTGTCTGT+AGG 0.513950 1_1:-64547674 None:intergenic
TATCAGAAACAAGGAAAAGC+TGG 0.514659 1_1:+64548339 Msa0036140:CDS
TTTCCCACACATGTATTCAT+GGG 0.515246 1_1:-64551003 None:intergenic
CTTTGCTGGGTACGCAACTT+GGG 0.517439 1_1:-64545885 None:intergenic
GTACTTCACCATCAACTTCA+GGG 0.517769 1_1:+64546168 Msa0036140:CDS
CTCCTCCTGTTGATCAAATG+AGG 0.518702 1_1:+64546108 Msa0036140:CDS
CGGTTTCTCCTAAACGGGTC+AGG 0.519772 1_1:-64545921 None:intergenic
TTGGGCCAAAGCTTCAGCAT+GGG 0.519858 1_1:-64549923 None:intergenic
GTTACAGCTTGTGACCCCTC+CGG 0.520746 1_1:-64550525 None:intergenic
ATAATCTGCATGCTCAGACC+TGG 0.522168 1_1:-64547140 None:intergenic
ACCCGAATCAACCCTTTGCT+GGG 0.522594 1_1:-64545898 None:intergenic
ACTGCATCGTATGTGGTAGA+AGG 0.522642 1_1:+64548370 Msa0036140:CDS
CTGCCTGTATATCTTATGGT+TGG 0.523970 1_1:-64547911 None:intergenic
GTGATGGGTTTCCTATCCAC+AGG 0.525869 1_1:-64546689 None:intergenic
GGAGTTAGAAGAGTTGGCAG+TGG 0.526267 1_1:+64545996 Msa0036140:CDS
TGATGGGTTGGATCCGTCGC+CGG 0.526918 1_1:+64545947 Msa0036140:CDS
TTCAGAGGACTCAATTTCAC+CGG 0.528835 1_1:-64545966 None:intergenic
TTATTATGAAAGTGAAGAGT+GGG 0.529170 1_1:+64547840 Msa0036140:CDS
ATGAAGTTGGAAGTTCATAT+AGG 0.529341 1_1:+64546357 Msa0036140:CDS
ATTGGAGTACGGTAAAGAGC+AGG 0.530763 1_1:+64550645 Msa0036140:CDS
GACAGATCAGGGAGACAAAG+TGG 0.531730 1_1:+64550556 Msa0036140:CDS
TTACAGGTACTTCTCACTTG+AGG 0.534120 1_1:+64546891 Msa0036140:CDS
TTGATTGAAAGCAGATTAGG+TGG 0.537390 1_1:+64546293 Msa0036140:CDS
GGTGGTGGTGATGGATTTGA+AGG 0.537679 1_1:+64546029 Msa0036140:CDS
CTGTTAAAACCGACGAGAGG+CGG 0.537706 1_1:+64550696 Msa0036140:CDS
TGAACCTACCTGTCCAAAGA+AGG 0.538300 1_1:+64548316 Msa0036140:CDS
TCATGCTCAAATCTCCCAGC+TGG 0.538349 1_1:-64546467 None:intergenic
GGTAGCTCCTAATGGTCGAT+TGG 0.538717 1_1:+64547234 Msa0036140:CDS
CAATAGCAAGAATTGGAGTA+CGG 0.538887 1_1:+64550634 Msa0036140:CDS
CAGGGTTGAGACCTAGATAT+GGG 0.539027 1_1:+64546186 Msa0036140:CDS
GATACCTTCTTTGGACAGGT+AGG 0.540326 1_1:-64548320 None:intergenic
ATTGAAAGCAGATTAGGTGG+TGG 0.541045 1_1:+64546296 Msa0036140:CDS
GGCGTTTGCCTCCACCGTCA+AGG 0.541534 1_1:+64546438 Msa0036140:CDS
ATTATTATGGAAATCCAAGA+AGG 0.542489 1_1:+64547350 Msa0036140:CDS
GGCACACTCCTTGACGGTGG+AGG 0.543168 1_1:-64546446 None:intergenic
TGAATGGTAGAACAAGTGGT+AGG 0.545441 1_1:+64546072 Msa0036140:CDS
AGTGTCCATGAATTCCTTTG+AGG 0.546295 1_1:-64549755 None:intergenic
CAATATGTGTTATGATGGGA+TGG 0.546565 1_1:+64549851 Msa0036140:CDS
GTTATTTCATTTAAATACAA+GGG 0.547305 1_1:+64550929 Msa0036140:three_prime_UTR
GTGATGGGTTTCCTATCCAC+AGG 0.548064 1_1:-64546776 None:intergenic
GAGAAACCGTCGTGATGGGT+TGG 0.548181 1_1:+64545935 Msa0036140:CDS
TTTCTATGCTCGCATGGTGA+TGG 0.548274 1_1:+64546953 Msa0036140:CDS
AGTGGTAGCAAAAGGGGTGG+TGG 0.550703 1_1:+64546014 Msa0036140:CDS
CCATTACAGAATCCCATGGT+GGG 0.551520 1_1:+64546531 Msa0036140:CDS
CAAGTTGCGTACCCAGCAAA+GGG 0.551699 1_1:+64545887 Msa0036140:CDS
TATCCACGGGCAAATGCTCT+CGG 0.552610 1_1:-64546502 None:intergenic
TATCCACAGGCAAATGCTCT+CGG 0.553255 1_1:-64546676 None:intergenic
TGCAGAACCCGAGCCAACTG+AGG 0.553369 1_1:+64548230 Msa0036140:CDS
CAGACAAGCTGGCAGAGTGC+AGG 0.553853 1_1:+64547678 Msa0036140:CDS
GCAGAACCCGAGCCAACTGA+GGG 0.554178 1_1:+64548231 Msa0036140:CDS
CCATCACACAATCCCATAGT+GGG 0.554875 1_1:+64546792 Msa0036140:CDS
AGTTGGCAGTGGTAGCAAAA+GGG 0.556305 1_1:+64546007 Msa0036140:CDS
TATAAGTATGGAAACAATTG+AGG 0.556311 1_1:+64550029 Msa0036140:CDS
GGACTCAATTTCACCGGCGA+CGG 0.556718 1_1:-64545960 None:intergenic
GTGGTGATGGATTTGAAGGG+AGG 0.557298 1_1:+64546033 Msa0036140:CDS
ATATCACCTCAAGTTTCTAT+GGG 0.558486 1_1:+64547991 Msa0036140:CDS
ATTATTATGAAAGTGAAGAG+TGG 0.559206 1_1:+64547839 Msa0036140:CDS
GGGCAAGACCTGGGGAACCC+AGG 0.559724 1_1:-64549902 None:intergenic
TGTTTGTACTGCATCGTATG+TGG 0.560011 1_1:+64548363 Msa0036140:CDS
GGGTTAAGTATCATCAATTG+TGG 0.560220 1_1:-64550983 None:intergenic
GTAAAATCCTTTGCGTAAGA+GGG 0.562512 1_1:-64546872 None:intergenic
CAGGACGGTTTGAGCATGAA+AGG 0.562755 1_1:+64546558 Msa0036140:CDS
TCTCATAATCAGCTCTCCCC+CGG 0.562920 1_1:-64550493 None:intergenic
GAGAGCATTTGCCTGTGGAT+AGG 0.563005 1_1:+64546678 Msa0036140:CDS
TTGAGTCCTCTGAAGGTGGA+TGG 0.565747 1_1:+64545975 Msa0036140:CDS
GCCACCTATAGACACTAGTA+GGG 0.567101 1_1:+64547060 Msa0036140:CDS
GGTGGTGTAAGTGTAACATC+AGG 0.567283 1_1:+64546395 Msa0036140:CDS
CCAAGTTGCGTACCCAGCAA+AGG 0.567307 1_1:+64545886 Msa0036140:CDS
TGGTGATGGATTTGAAGGGA+GGG 0.568476 1_1:+64546034 Msa0036140:CDS
GATTATGAGAGGATAAAATC+CGG 0.568891 1_1:+64550506 Msa0036140:CDS
TTTCATCTTATGATCAGCCT+AGG 0.571186 1_1:+64546987 Msa0036140:CDS
AATGAGTTGGAGAATGGAGA+AGG 0.571373 1_1:+64547949 Msa0036140:CDS
CTAACTCCATCCACCTTCAG+AGG 0.571656 1_1:-64545981 None:intergenic
TTCCTCAAGATACAGTAACC+TGG 0.571698 1_1:+64549884 Msa0036140:CDS
CATACATAAGCTAACTATGG+AGG 0.573930 1_1:-64551040 None:intergenic
AACTCCTCAGAGCCCTCAGT+TGG 0.574076 1_1:-64548243 None:intergenic
TCTCCCTGTTCCTCCACCGT+GGG 0.574178 1_1:-64546630 None:intergenic
TGTAATGGGTATCTTATCCA+CGG 0.575463 1_1:-64546516 None:intergenic
CAAAGAAGGTATCAGAAACA+AGG 0.576004 1_1:+64548330 Msa0036140:CDS
TGGACGTGAGATGTAATGTC+TGG 0.576907 1_1:-64547299 None:intergenic
GAAAGAGTATTGTGAATCAG+AGG 0.576978 1_1:+64546318 Msa0036140:CDS
GAATGGTAGAACAAGTGGTA+GGG 0.577843 1_1:+64546073 Msa0036140:CDS
TGGTTATGTGGCAATTGCAG+AGG 0.579048 1_1:+64550592 Msa0036140:CDS
ATTCAATCAAAACAGGGTGA+TGG 0.581142 1_1:+64547451 Msa0036140:CDS
ATCTCCCTGTTCCTCCACCG+TGG 0.582616 1_1:-64546631 None:intergenic
AATCCCACGGTGAGGGAACA+GGG 0.583286 1_1:+64546714 Msa0036140:CDS
TCCTCAAGATACAGTAACCT+GGG 0.584295 1_1:+64549885 Msa0036140:CDS
GAATATGAATCTCGAAGAGA+TGG 0.584947 1_1:+64547589 Msa0036140:CDS
GAAAACTTGCAGAAGGTGCA+GGG 0.585064 1_1:+64547017 Msa0036140:CDS
ATATTATGGATGATAACAAC+TGG 0.585196 1_1:-64549970 None:intergenic
CATTTGAATGGTAGAACAAG+TGG 0.587209 1_1:+64546068 Msa0036140:CDS
GGATTATGGAAACTGCTCCA+TGG 0.590332 1_1:+64546913 Msa0036140:CDS
TAACCCATGAATACATGTGT+GGG 0.590532 1_1:+64551000 Msa0036140:three_prime_UTR
TGAAGCTTTGGCCCAAAAGG+AGG 0.590534 1_1:+64549930 Msa0036140:CDS
TTAGAAACCTACAGACAAGC+TGG 0.592375 1_1:+64547667 Msa0036140:CDS
CTCGAAGAGATGGCGCTCCA+GGG 0.592518 1_1:+64547599 Msa0036140:CDS
TGGGCCAAAGCTTCAGCATG+GGG 0.593414 1_1:-64549922 None:intergenic
TTCCTCATTTGATCAACAGG+AGG 0.593694 1_1:-64546110 None:intergenic
TCTAAATCATGCTTAGACAG+AGG 0.593939 1_1:-64547649 None:intergenic
CGAGCCAACTGAGGGCTCTG+AGG 0.594117 1_1:+64548239 Msa0036140:CDS
TCAGCATGGGGCAAGACCTG+GGG 0.594459 1_1:-64549910 None:intergenic
TAAGTATCATCAATTGTGGA+TGG 0.595616 1_1:-64550979 None:intergenic
TCAGGATATGACGAAGAAGA+TGG 0.595618 1_1:+64546413 Msa0036140:CDS
GAAATCAAGTAAATGGGGTG+CGG 0.598537 1_1:+64547801 Msa0036140:CDS
GTTGGCAGTGGTAGCAAAAG+GGG 0.598710 1_1:+64546008 Msa0036140:CDS
TTTATGGTACAGTTCCTCAA+AGG 0.600720 1_1:+64549741 Msa0036140:intron
ATCACAGAATCCCACGGTGA+GGG 0.601138 1_1:+64546707 Msa0036140:CDS
CATTACAGAATCCCATGGTG+GGG 0.601469 1_1:+64546532 Msa0036140:CDS
TGACGAATCATATGAAGATG+TGG 0.602097 1_1:+64548200 Msa0036140:CDS
TTCATATCTGGATGCACCAG+AGG 0.604012 1_1:+64547537 Msa0036140:CDS
ATTACAGAATCCCACGGTGG+AGG 0.604178 1_1:+64546620 Msa0036140:CDS
TGTGAATTATATGACCGCTC+AGG 0.606146 1_1:+64550880 Msa0036140:three_prime_UTR
TATCCACAGGAAAATGCTCT+CGG 0.606157 1_1:-64546763 None:intergenic
GTCAGCACCACCATAATCCA+TGG 0.606495 1_1:-64546219 None:intergenic
GGTGCAGGGTTTAGTGGACA+TGG 0.608373 1_1:+64547031 Msa0036140:CDS
TGGGATGAGAGCTAAACACT+TGG 0.608681 1_1:+64549816 Msa0036140:CDS
GTAATGGGTATCTTATCCAC+GGG 0.610013 1_1:-64546515 None:intergenic
ATTATCTCCCTCTTACGCAA+AGG 0.611093 1_1:+64546865 Msa0036140:CDS
GGATATGACGAAGAAGATGG+TGG 0.615288 1_1:+64546416 Msa0036140:CDS
TGACAATCCTCAAAACTGGA+AGG 0.615565 1_1:+64550005 Msa0036140:CDS
GGTGAAATTGAGTCCTCTGA+AGG 0.615870 1_1:+64545968 Msa0036140:CDS
GGTGATATCCTCTTATCAGA+AGG 0.618738 1_1:-64547976 None:intergenic
ACCCAGGTTACTGTATCTTG+AGG 0.620230 1_1:-64549886 None:intergenic
GGTTTAGTGGACATGGCCAA+AGG 0.621304 1_1:+64547038 Msa0036140:CDS
TGCGTAAGAGGGAGATAATG+TGG 0.622096 1_1:-64546861 None:intergenic
TTATGATCACCGCCTCTCGT+CGG 0.623176 1_1:-64550705 None:intergenic
GGGGTCCTGAAATTGGGCAG+AGG 0.625540 1_1:+64547080 Msa0036140:CDS
TATGATCAGCCTAGGAGCAG+CGG 0.626439 1_1:+64546995 Msa0036140:CDS
ATACATAAGCTAACTATGGA+GGG 0.626593 1_1:-64551039 None:intergenic
AACATTGAAGAGACAGATCA+GGG 0.627235 1_1:+64550545 Msa0036140:CDS
TATCCCTGTTCCCTCACCGT+GGG 0.628171 1_1:-64546717 None:intergenic
CAGGAAATGAGTCAGCATGT+TGG 0.631275 1_1:+64547697 Msa0036140:CDS
AATCCCACGGTGGAGGAACA+GGG 0.632337 1_1:+64546627 Msa0036140:CDS
GTATGATGATATACCTAGAA+GGG 0.633000 1_1:+64547213 Msa0036140:CDS
GAAATTGAGTCCTCTGAAGG+TGG 0.633656 1_1:+64545971 Msa0036140:CDS
ATGTTGGATCCTGCGATGCA+GGG 0.635002 1_1:-64547396 None:intergenic
TATCTTTCTGATAGCAACCG+GGG 0.635487 1_1:+64550476 Msa0036140:CDS
TCTGCATGCTCAGACCTGGA+AGG 0.636035 1_1:-64547136 None:intergenic
AAAATGAAATCAAGTAAATG+GGG 0.637217 1_1:+64547796 Msa0036140:CDS
ATGAGAGGATAAAATCCGGA+GGG 0.639458 1_1:+64550510 Msa0036140:CDS
ATATCTTTCTGATAGCAACC+GGG 0.641160 1_1:+64550475 Msa0036140:CDS
AAAGCAATATGTGTTATGAT+GGG 0.641357 1_1:+64549847 Msa0036140:CDS
TTATTATGGAAATCCAAGAA+GGG 0.642724 1_1:+64547351 Msa0036140:CDS
AGCAGCGGAAAACTTGCAGA+AGG 0.643382 1_1:+64547010 Msa0036140:CDS
GCTGGCACACTCCTTGACGG+TGG 0.643586 1_1:-64546449 None:intergenic
TTAACCCATGAATACATGTG+TGG 0.646179 1_1:+64550999 Msa0036140:three_prime_UTR
AGGTCTATTCCGGATACTGG+TGG 0.647001 1_1:+64546377 Msa0036140:CDS
TGTAATGGAGTATGATAACA+GGG 0.647798 1_1:+64547270 Msa0036140:CDS
GATATGACGAAGAAGATGGT+GGG 0.647947 1_1:+64546417 Msa0036140:CDS
CCCATTACAGAATCCCATGG+TGG 0.650779 1_1:+64546530 Msa0036140:CDS
ATTACAGAATCCCATGGTGG+GGG 0.654532 1_1:+64546533 Msa0036140:CDS
GGGATGAGAGCTAAACACTT+GGG 0.662215 1_1:+64549817 Msa0036140:CDS
TCACCGAGAAAATTTGCATG+TGG 0.663801 1_1:+64546586 Msa0036140:CDS
CCCCTACTAGTGTCTATAGG+TGG 0.664627 1_1:-64547061 None:intergenic
GGCAGTGGTAGCAAAAGGGG+TGG 0.668013 1_1:+64546011 Msa0036140:CDS
ACATGTCCCATAGAAACTTG+AGG 0.670238 1_1:-64547997 None:intergenic
GTGGTGGTGATGGATTTGAA+GGG 0.674346 1_1:+64546030 Msa0036140:CDS
TCACCGAGAGCATTTGCCCG+TGG 0.675218 1_1:+64546499 Msa0036140:CDS
GAAACTGCTCCATGGAAACG+AGG 0.675690 1_1:+64546921 Msa0036140:CDS
ATACCCATTACAGAATCCCA+TGG 0.676173 1_1:+64546527 Msa0036140:CDS
TTATGGATGATAACAACTGG+TGG 0.677758 1_1:-64549967 None:intergenic
TTGGGCTGGGAGATGCAGAG+AGG 0.681547 1_1:+64550444 Msa0036140:CDS
ACACCGAGAGCATTTGCCTG+TGG 0.682250 1_1:+64546673 Msa0036140:CDS
CATCACAGAATCCCACGGTG+AGG 0.687385 1_1:+64546706 Msa0036140:CDS
TGAGAGGATAAAATCCGGAG+GGG 0.688517 1_1:+64550511 Msa0036140:CDS
ATCCTGTTAAAACCGACGAG+AGG 0.694906 1_1:+64550693 Msa0036140:CDS
ATCTTTCTGATAGCAACCGG+GGG 0.698939 1_1:+64550477 Msa0036140:CDS
AAACCCATCACAGAATCCCA+CGG 0.699496 1_1:+64546701 Msa0036140:CDS
TATGAGAGGATAAAATCCGG+AGG 0.699994 1_1:+64550509 Msa0036140:CDS
ACATCAATTCAATCAAAACA+GGG 0.700461 1_1:+64547445 Msa0036140:CDS
CATCACACAATCCCATAGTG+GGG 0.710730 1_1:+64546793 Msa0036140:CDS
GGATGATTAGACAGTCACCA+AGG 0.710980 1_1:+64550956 Msa0036140:three_prime_UTR
ATATCCCTGTTCCCTCACCG+TGG 0.712877 1_1:-64546718 None:intergenic
GAGTACGGTAAAGAGCAGGA+AGG 0.713116 1_1:+64550649 Msa0036140:CDS
ATACCCATTACAGAATCCCA+CGG 0.715467 1_1:+64546614 Msa0036140:CDS
AATATGTGTTATGATGGGAT+GGG 0.718366 1_1:+64549852 Msa0036140:CDS
TTGGATACATTCATCCTGAG+CGG 0.723029 1_1:-64550894 None:intergenic
ACTGCTCCATGGAAACGAGG+AGG 0.723109 1_1:+64546924 Msa0036140:CDS
CCACCTATAGACACTAGTAG+GGG 0.731685 1_1:+64547061 Msa0036140:CDS
TTGGATCCTGCGATGCAGGG+TGG 0.739391 1_1:-64547393 None:intergenic
ACGGATCCAACCCATCACGA+CGG 0.757815 1_1:-64545941 None:intergenic
CCCATTACAGAATCCCACGG+TGG 0.779374 1_1:+64546617 Msa0036140:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATTATAATGAAAATAG+TGG + chr1_1:64549570-64549589 Msa0036140:intron 10.0%
!! AAAAATGAAATCAAGTAAAT+GGG + chr1_1:64547795-64547814 Msa0036140:CDS 15.0%
!! TATGATGAAAAAAATTGATT+CGG - chr1_1:64549197-64549216 None:intergenic 15.0%
!!! ATATTTTTTTTTTCCTTTAG+AGG + chr1_1:64549214-64549233 Msa0036140:intron 15.0%
!!! TATTTTTTTTTTCCTTTAGA+GGG + chr1_1:64549215-64549234 Msa0036140:intron 15.0%
!!! TAAAATGATAGATAATTTTG+AGG + chr1_1:64549388-64549407 Msa0036140:intron 15.0%
!! TTTGAATAATTATTATTGCA+CGG - chr1_1:64550094-64550113 None:intergenic 15.0%
!!! AAACTCAATATGATTTTTAA+TGG + chr1_1:64550111-64550130 Msa0036140:intron 15.0%
!!! AAATAACATTTTAAGAACAT+TGG - chr1_1:64550916-64550935 None:intergenic 15.0%
!!! TGTTATTTCATTTAAATACA+AGG + chr1_1:64550928-64550947 Msa0036140:three_prime_UTR 15.0%
!!! GTTATTTCATTTAAATACAA+GGG + chr1_1:64550929-64550948 Msa0036140:three_prime_UTR 15.0%
!! TATGAAACTTCATAATCATT+TGG - chr1_1:64547523-64547542 None:intergenic 20.0%
!! GAAAAATGAAATCAAGTAAA+TGG + chr1_1:64547794-64547813 Msa0036140:CDS 20.0%
!! AAAATGAAATCAAGTAAATG+GGG + chr1_1:64547796-64547815 Msa0036140:CDS 20.0%
!! TAAGAATAAATACAATGAGT+TGG + chr1_1:64547936-64547955 Msa0036140:CDS 20.0%
!!! ATGATGTCTTATATTTTGAT+TGG - chr1_1:64548055-64548074 None:intergenic 20.0%
!!! TATAATGCTCTTTTATCAAA+TGG + chr1_1:64548407-64548426 Msa0036140:intron 20.0%
!! TTACATGTAGTATTATTCTT+AGG + chr1_1:64548492-64548511 Msa0036140:intron 20.0%
!!! TCTTTTTTTATGAAGATCAT+AGG - chr1_1:64548896-64548915 None:intergenic 20.0%
!! TTATAACTTCTTAGACAATT+AGG + chr1_1:64548964-64548983 Msa0036140:intron 20.0%
!!! AAGTATGTAATGTTTTCATA+AGG - chr1_1:64550219-64550238 None:intergenic 20.0%
!! ATTACATACTTATTGAGTAA+AGG + chr1_1:64550228-64550247 Msa0036140:intron 20.0%
!! TTACATACTTATTGAGTAAA+GGG + chr1_1:64550229-64550248 Msa0036140:intron 20.0%
!!! AAAAGGTCACTTTTTAATGA+CGG + chr1_1:64546131-64546150 Msa0036140:CDS 25.0%
!! TATTCAAAAACCATGGATTA+TGG + chr1_1:64546209-64546228 Msa0036140:CDS 25.0%
!! AATGTTTTATGCAAGAGATA+GGG + chr1_1:64546826-64546845 Msa0036140:CDS 25.0%
! ATTATTATGGAAATCCAAGA+AGG + chr1_1:64547350-64547369 Msa0036140:CDS 25.0%
! TTATTATGGAAATCCAAGAA+GGG + chr1_1:64547351-64547370 Msa0036140:CDS 25.0%
! AACATCAATTCAATCAAAAC+AGG + chr1_1:64547444-64547463 Msa0036140:CDS 25.0%
! ACATCAATTCAATCAAAACA+GGG + chr1_1:64547445-64547464 Msa0036140:CDS 25.0%
! TGATTATGAAGTTTCATATC+TGG + chr1_1:64547525-64547544 Msa0036140:CDS 25.0%
! ATTATTATGAAAGTGAAGAG+TGG + chr1_1:64547839-64547858 Msa0036140:CDS 25.0%
! TTATTATGAAAGTGAAGAGT+GGG + chr1_1:64547840-64547859 Msa0036140:CDS 25.0%
! GCGTATTCATATAAAAATGT+TGG + chr1_1:64547886-64547905 Msa0036140:CDS 25.0%
! TTCTATAAACATATTGCATC+AGG + chr1_1:64548435-64548454 Msa0036140:intron 25.0%
! CACCTGTAAGTTAAATAATA+GGG - chr1_1:64548465-64548484 None:intergenic 25.0%
! ATAGTTGTTGTACTTCATTA+AGG + chr1_1:64548537-64548556 Msa0036140:intron 25.0%
! TAGTTGTTGTACTTCATTAA+GGG + chr1_1:64548538-64548557 Msa0036140:intron 25.0%
! TACCATATGTTTGATCTTAT+TGG - chr1_1:64548599-64548618 None:intergenic 25.0%
! CATAGTAGCAAACTTATAAT+TGG - chr1_1:64548691-64548710 None:intergenic 25.0%
!!! TAAGTAATTATTTTAGCCTC+TGG + chr1_1:64548788-64548807 Msa0036140:intron 25.0%
! AAAGTTCGTGACTATTTATT+TGG + chr1_1:64548819-64548838 Msa0036140:intron 25.0%
! AAGTTCGTGACTATTTATTT+GGG + chr1_1:64548820-64548839 Msa0036140:intron 25.0%
! ACTATTTATTTGGGAAGAAA+AGG + chr1_1:64548829-64548848 Msa0036140:intron 25.0%
! TGTAGATTGAATTTCCTATT+AGG + chr1_1:64548998-64549017 Msa0036140:intron 25.0%
!! TTCCACTAAAAATCTAAAAC+CGG - chr1_1:64549044-64549063 None:intergenic 25.0%
! GCTGTATATGTATAACAATT+AGG + chr1_1:64549097-64549116 Msa0036140:intron 25.0%
! AATTAGGATTAATCTGAATC+TGG + chr1_1:64549113-64549132 Msa0036140:intron 25.0%
!! GAATCTGGAATTGTTAATAT+AGG + chr1_1:64549128-64549147 Msa0036140:intron 25.0%
! GTAGCTAAGAATTAAGATTA+GGG - chr1_1:64549266-64549285 None:intergenic 25.0%
! AGTAGCTAAGAATTAAGATT+AGG - chr1_1:64549267-64549286 None:intergenic 25.0%
! TACCATAAAGGAAAATAAAC+AGG - chr1_1:64549730-64549749 None:intergenic 25.0%
! AAAGCAATATGTGTTATGAT+GGG + chr1_1:64549847-64549866 Msa0036140:CDS 25.0%
! ATATTATGGATGATAACAAC+TGG - chr1_1:64549973-64549992 None:intergenic 25.0%
! CATCAGACATTGAAATATTA+TGG - chr1_1:64549987-64550006 None:intergenic 25.0%
! TATAAGTATGGAAACAATTG+AGG + chr1_1:64550029-64550048 Msa0036140:CDS 25.0%
! ACATAGAACTAAGAAATACT+TGG - chr1_1:64550138-64550157 None:intergenic 25.0%
! TGCAGTTTGTATAATAAATG+GGG - chr1_1:64550180-64550199 None:intergenic 25.0%
! GTGCAGTTTGTATAATAAAT+GGG - chr1_1:64550181-64550200 None:intergenic 25.0%
! CATTTATTATACAAACTGCA+CGG + chr1_1:64550180-64550199 Msa0036140:intron 25.0%
! TACATACTTATTGAGTAAAG+GGG + chr1_1:64550230-64550249 Msa0036140:intron 25.0%
!! ATTTTTCATAAGGCAACAAT+TGG - chr1_1:64550295-64550314 None:intergenic 25.0%
! TAGATTTCAATAGCAAGAAT+TGG + chr1_1:64550627-64550646 Msa0036140:CDS 25.0%
! TAACCGTTTCAAAAAATTCA+TGG + chr1_1:64550725-64550744 Msa0036140:three_prime_UTR 25.0%
! AACCGTTTCAAAAAATTCAT+GGG + chr1_1:64550726-64550745 Msa0036140:three_prime_UTR 25.0%
!!! AACACTCAAATTTTAGAACT+GGG - chr1_1:64550753-64550772 None:intergenic 25.0%
! TCATTTAAATACAAGGGTTA+AGG + chr1_1:64550935-64550954 Msa0036140:three_prime_UTR 25.0%
! CTTATGTATGAACATCTATT+TGG + chr1_1:64551053-64551072 Msa0036140:three_prime_UTR 25.0%
!!! AAAGGTCACTTTTTAATGAC+GGG + chr1_1:64546132-64546151 Msa0036140:CDS 30.0%
! GTTTTTGAATACCCATATCT+AGG - chr1_1:64546200-64546219 None:intergenic 30.0%
ATATGGGTATTCAAAAACCA+TGG + chr1_1:64546202-64546221 Msa0036140:CDS 30.0%
ATGAAACGTGTTTATCTTGA+TGG + chr1_1:64546260-64546279 Msa0036140:CDS 30.0%
TGTTTATCTTGATGGAGATA+AGG + chr1_1:64546268-64546287 Msa0036140:CDS 30.0%
GATTTGATTGAAAGCAGATT+AGG + chr1_1:64546290-64546309 Msa0036140:CDS 30.0%
TTGAGAAGTGAAAATGAAGT+TGG + chr1_1:64546344-64546363 Msa0036140:CDS 30.0%
ATGAAGTTGGAAGTTCATAT+AGG + chr1_1:64546357-64546376 Msa0036140:CDS 30.0%
AAGTTCATATAGGTCTATTC+CGG + chr1_1:64546367-64546386 Msa0036140:CDS 30.0%
! TATCCACATGCAAATTTTCT+CGG - chr1_1:64546592-64546611 None:intergenic 30.0%
! CAATGTTTTATGCAAGAGAT+AGG + chr1_1:64546825-64546844 Msa0036140:CDS 30.0%
TTCTAGGTATATCATCATAC+TGG - chr1_1:64547213-64547232 None:intergenic 30.0%
AGTATGATGATATACCTAGA+AGG + chr1_1:64547212-64547231 Msa0036140:CDS 30.0%
GTATGATGATATACCTAGAA+GGG + chr1_1:64547213-64547232 Msa0036140:CDS 30.0%
! TGTAATGGAGTATGATAACA+GGG + chr1_1:64547270-64547289 Msa0036140:CDS 30.0%
TTACCAGTTCTATCTAAATC+TGG - chr1_1:64547322-64547341 None:intergenic 30.0%
GGTAAGAGTGAAGATTATTA+TGG + chr1_1:64547337-64547356 Msa0036140:CDS 30.0%
TCATGATAGTCTACATATGT+TGG - chr1_1:64547415-64547434 None:intergenic 30.0%
! TTTTCACAAGTCTATCTGAA+TGG - chr1_1:64547732-64547751 None:intergenic 30.0%
! ACGAACATCTATTTCTTCAT+TGG - chr1_1:64547767-64547786 None:intergenic 30.0%
AGATGATGAAGACATGAATA+TGG + chr1_1:64547864-64547883 Msa0036140:CDS 30.0%
! AAATACAATGAGTTGGAGAA+TGG + chr1_1:64547943-64547962 Msa0036140:CDS 30.0%
ATATCACCTCAAGTTTCTAT+GGG + chr1_1:64547991-64548010 Msa0036140:CDS 30.0%
!! TACTTCTGAAATCGAAATGA+TGG - chr1_1:64548030-64548049 None:intergenic 30.0%
! ATAAACCTCAGCATTTTTCT+AGG + chr1_1:64548100-64548119 Msa0036140:CDS 30.0%
GCAAATCAAAAACAACCTAA+AGG + chr1_1:64548129-64548148 Msa0036140:CDS 30.0%
ATCAAAAACAACCTAAAGGT+TGG + chr1_1:64548133-64548152 Msa0036140:CDS 30.0%
!!! TGATACTTTTTCCAACCTTT+AGG - chr1_1:64548147-64548166 None:intergenic 30.0%
TATAAACATATTGCATCAGG+AGG + chr1_1:64548438-64548457 Msa0036140:intron 30.0%
! GTCCCTATTATTTAACTTAC+AGG + chr1_1:64548460-64548479 Msa0036140:intron 30.0%
CCACCTGTAAGTTAAATAAT+AGG - chr1_1:64548466-64548485 None:intergenic 30.0%
! CCTATTATTTAACTTACAGG+TGG + chr1_1:64548463-64548482 Msa0036140:intron 30.0%
AGTTGTTGTACTTCATTAAG+GGG + chr1_1:64548539-64548558 Msa0036140:intron 30.0%
ATGTTTGATCTTATTGGCAT+GGG - chr1_1:64548593-64548612 None:intergenic 30.0%
TATGTTTGATCTTATTGGCA+TGG - chr1_1:64548594-64548613 None:intergenic 30.0%
TGCCAATAAGATCAAACATA+TGG + chr1_1:64548594-64548613 Msa0036140:intron 30.0%
TAAATAGTCACGAACTTTGA+AGG - chr1_1:64548817-64548836 None:intergenic 30.0%
TCTTAGACAATTAGGATTGT+TGG + chr1_1:64548972-64548991 Msa0036140:intron 30.0%
TGAATTTCCTATTAGGAGTA+TGG + chr1_1:64549005-64549024 Msa0036140:intron 30.0%
!!! TTCCGGTTTTAGATTTTTAG+TGG + chr1_1:64549039-64549058 Msa0036140:intron 30.0%
!!! TTTAGATTTTTAGTGGAACC+AGG + chr1_1:64549046-64549065 Msa0036140:intron 30.0%
CTTAATTCTTAGCTACTCTA+TGG + chr1_1:64549270-64549289 Msa0036140:intron 30.0%
!! TATCTAAGTAATTAGCCTTC+TGG - chr1_1:64549343-64549362 None:intergenic 30.0%
! TCTATAGTTTTTCTCTCTGT+TGG + chr1_1:64549454-64549473 Msa0036140:intron 30.0%
TGCTGCTGATAAATAAAAGT+TGG - chr1_1:64549507-64549526 None:intergenic 30.0%
GTCAAGCATAAAAAATGTAC+AGG - chr1_1:64549618-64549637 None:intergenic 30.0%
GACAGAAGTTTATGATGTAT+AGG + chr1_1:64549635-64549654 Msa0036140:intron 30.0%
!! GTCCTGTTTATTTTCCTTTA+TGG + chr1_1:64549725-64549744 Msa0036140:intron 30.0%
CAAAGCAATATGTGTTATGA+TGG + chr1_1:64549846-64549865 Msa0036140:CDS 30.0%
! AATATGTGTTATGATGGGAT+GGG + chr1_1:64549852-64549871 Msa0036140:CDS 30.0%
! AAGAATCAAATCCTCCTTTT+GGG - chr1_1:64549944-64549963 None:intergenic 30.0%
! AAAGAATCAAATCCTCCTTT+TGG - chr1_1:64549945-64549964 None:intergenic 30.0%
AAAAGGAGGATTTGATTCTT+TGG + chr1_1:64549944-64549963 Msa0036140:CDS 30.0%
AAACTGGAAGGTTATAAGTA+TGG + chr1_1:64550017-64550036 Msa0036140:CDS 30.0%
CGTGCAGTTTGTATAATAAA+TGG - chr1_1:64550182-64550201 None:intergenic 30.0%
ACATACTTATTGAGTAAAGG+GGG + chr1_1:64550231-64550250 Msa0036140:intron 30.0%
ACAATTGGTGAGTAAAGAAT+GGG - chr1_1:64550280-64550299 None:intergenic 30.0%
AACAATTGGTGAGTAAAGAA+TGG - chr1_1:64550281-64550300 None:intergenic 30.0%
! GCAAATGTGCATTTTTCATA+AGG - chr1_1:64550305-64550324 None:intergenic 30.0%
! TATTTCTTTTCATGCTTTGC+AGG + chr1_1:64550332-64550351 Msa0036140:intron 30.0%
GACGAATCAAATTATGCTTA+GGG + chr1_1:64550372-64550391 Msa0036140:CDS 30.0%
AATATCTTTCTGATAGCAAC+CGG + chr1_1:64550474-64550493 Msa0036140:CDS 30.0%
GATTATGAGAGGATAAAATC+CGG + chr1_1:64550506-64550525 Msa0036140:CDS 30.0%
! AAAGTGGAGAGTTTTCTTTA+TGG + chr1_1:64550572-64550591 Msa0036140:CDS 30.0%
! GAGTTTTCTTTATGGTTATG+TGG + chr1_1:64550580-64550599 Msa0036140:CDS 30.0%
!!! GACCCATGAATTTTTTGAAA+CGG - chr1_1:64550731-64550750 None:intergenic 30.0%
!!! GAACACTCAAATTTTAGAAC+TGG - chr1_1:64550754-64550773 None:intergenic 30.0%
AGAACTGCTAACTTAAGTAT+AGG - chr1_1:64550798-64550817 None:intergenic 30.0%
CAGAAAAAGAACTCATACAA+AGG - chr1_1:64550858-64550877 None:intergenic 30.0%
TAAGTATCATCAATTGTGGA+TGG - chr1_1:64550982-64551001 None:intergenic 30.0%
ATACATAAGCTAACTATGGA+GGG - chr1_1:64551042-64551061 None:intergenic 30.0%
GTTCATACATAAGCTAACTA+TGG - chr1_1:64551046-64551065 None:intergenic 30.0%
GATTCTGATTGGCATTTGAA+TGG + chr1_1:64546056-64546075 Msa0036140:CDS 35.0%
CATTTGAATGGTAGAACAAG+TGG + chr1_1:64546068-64546087 Msa0036140:CDS 35.0%
! CTTTTCCTCATTTGATCAAC+AGG - chr1_1:64546116-64546135 None:intergenic 35.0%
CTGTTGATCAAATGAGGAAA+AGG + chr1_1:64546114-64546133 Msa0036140:CDS 35.0%
!!! AAGGTCACTTTTTAATGACG+GGG + chr1_1:64546133-64546152 Msa0036140:CDS 35.0%
! TCAAAAACCATGGATTATGG+TGG + chr1_1:64546212-64546231 Msa0036140:CDS 35.0%
TTGATTGAAAGCAGATTAGG+TGG + chr1_1:64546293-64546312 Msa0036140:CDS 35.0%
!! GAAAGAGTATTGTGAATCAG+AGG + chr1_1:64546318-64546337 Msa0036140:CDS 35.0%
!! TGTAATGGGTATCTTATCCA+CGG - chr1_1:64546519-64546538 None:intergenic 35.0%
GTAAAATCCTTTGCGTAAGA+GGG - chr1_1:64546875-64546894 None:intergenic 35.0%
TGTAAAATCCTTTGCGTAAG+AGG - chr1_1:64546876-64546895 None:intergenic 35.0%
! TCTTACGCAAAGGATTTTAC+AGG + chr1_1:64546875-64546894 Msa0036140:CDS 35.0%
TTTCATCTTATGATCAGCCT+AGG + chr1_1:64546987-64547006 Msa0036140:CDS 35.0%
AAATTGGGCAGAGGAATATT+AGG + chr1_1:64547089-64547108 Msa0036140:CDS 35.0%
AAGGACTTAACTCACATTGA+TGG - chr1_1:64547120-64547139 None:intergenic 35.0%
! CTGTAATGGAGTATGATAAC+AGG + chr1_1:64547269-64547288 Msa0036140:CDS 35.0%
TCATGCATAATATCCCTTCT+TGG - chr1_1:64547367-64547386 None:intergenic 35.0%
ATTCAATCAAAACAGGGTGA+TGG + chr1_1:64547451-64547470 Msa0036140:CDS 35.0%
! GATATTTGATGATATGCCTC+TGG - chr1_1:64547556-64547575 None:intergenic 35.0%
GAATATGAATCTCGAAGAGA+TGG + chr1_1:64547589-64547608 Msa0036140:CDS 35.0%
TCTAAATCATGCTTAGACAG+AGG - chr1_1:64547652-64547671 None:intergenic 35.0%
GATCCAACCATAAGATATAC+AGG + chr1_1:64547908-64547927 Msa0036140:CDS 35.0%
TATGCTGCCTGTATATCTTA+TGG - chr1_1:64547918-64547937 None:intergenic 35.0%
! AAGGTTTTCCTTCTGATAAG+AGG + chr1_1:64547968-64547987 Msa0036140:CDS 35.0%
GATATCACCTCAAGTTTCTA+TGG + chr1_1:64547990-64548009 Msa0036140:CDS 35.0%
! CAAAGTCTAGTTCATCAAAC+TGG + chr1_1:64548076-64548095 Msa0036140:CDS 35.0%
!! GGTTGGAAAAAGTATCATCA+TGG + chr1_1:64548150-64548169 Msa0036140:CDS 35.0%
TGACGAATCATATGAAGATG+TGG + chr1_1:64548200-64548219 Msa0036140:CDS 35.0%
!! CTCTGAGGAGTTTTTACAAA+TGG + chr1_1:64548254-64548273 Msa0036140:CDS 35.0%
! TAGGTTCAGATTCAAGTTCT+TGG - chr1_1:64548304-64548323 None:intergenic 35.0%
!! CTTGTTTCTGATACCTTCTT+TGG - chr1_1:64548332-64548351 None:intergenic 35.0%
!! CAAAGAAGGTATCAGAAACA+AGG + chr1_1:64548330-64548349 Msa0036140:CDS 35.0%
TATCAGAAACAAGGAAAAGC+TGG + chr1_1:64548339-64548358 Msa0036140:CDS 35.0%
ACTTCATTAAGGGGAATTCA+TGG + chr1_1:64548548-64548567 Msa0036140:intron 35.0%
ACATATGGTAAATTGCTCTG+TGG + chr1_1:64548609-64548628 Msa0036140:intron 35.0%
GAACACTGCTAGGATAAATT+GGG + chr1_1:64548851-64548870 Msa0036140:intron 35.0%
ATAGGCCATAAAAACCTTTC+AGG - chr1_1:64548878-64548897 None:intergenic 35.0%
AAGATTGCTTTAACATGCCA+TGG + chr1_1:64548912-64548931 Msa0036140:intron 35.0%
AATGAGAAGAGAATACAGCT+AGG + chr1_1:64548941-64548960 Msa0036140:intron 35.0%
CTTACAACCATACTCCTAAT+AGG - chr1_1:64549015-64549034 None:intergenic 35.0%
GTATGGTTGTAAGTAACTTC+CGG + chr1_1:64549022-64549041 Msa0036140:intron 35.0%
! TTTCCTTTAGAGGGAATCTA+TGG + chr1_1:64549224-64549243 Msa0036140:intron 35.0%
TTTAGAGGGAATCTATGGTT+GGG + chr1_1:64549229-64549248 Msa0036140:intron 35.0%
AGAATTAAGATTAGGGACTC+TGG - chr1_1:64549259-64549278 None:intergenic 35.0%
TATTGCTTTAACGAACCAGA+AGG + chr1_1:64549325-64549344 Msa0036140:intron 35.0%
CACTTGCAAAGTTTCTTCTT+TGG + chr1_1:64549525-64549544 Msa0036140:intron 35.0%
TTTGAGGAACTGTACCATAA+AGG - chr1_1:64549742-64549761 None:intergenic 35.0%
TTTATGGTACAGTTCCTCAA+AGG + chr1_1:64549741-64549760 Msa0036140:intron 35.0%
! TCATGCTTTTATGTCCCATA+AGG + chr1_1:64549792-64549811 Msa0036140:CDS 35.0%
! CAATATGTGTTATGATGGGA+TGG + chr1_1:64549851-64549870 Msa0036140:CDS 35.0%
TTATGGATGATAACAACTGG+TGG - chr1_1:64549970-64549989 None:intergenic 35.0%
! CTTATAACCTTCCAGTTTTG+AGG - chr1_1:64550015-64550034 None:intergenic 35.0%
! ACAATTGAGGCGTTTATAAG+AGG + chr1_1:64550042-64550061 Msa0036140:CDS 35.0%
CAATTGGTGAGTAAAGAATG+GGG - chr1_1:64550279-64550298 None:intergenic 35.0%
! TTTTCATGCTTTGCAGGTAA+AGG + chr1_1:64550338-64550357 Msa0036140:intron 35.0%
GGACGAATCAAATTATGCTT+AGG + chr1_1:64550371-64550390 Msa0036140:CDS 35.0%
ACTTCACCAGAATAGTACTT+TGG - chr1_1:64550409-64550428 None:intergenic 35.0%
TACTATTCTGGTGAAGTTCT+TGG + chr1_1:64550412-64550431 Msa0036140:CDS 35.0%
ACTATTCTGGTGAAGTTCTT+GGG + chr1_1:64550413-64550432 Msa0036140:CDS 35.0%
ATATCTTTCTGATAGCAACC+GGG + chr1_1:64550475-64550494 Msa0036140:CDS 35.0%
TAACATTGAAGAGACAGATC+AGG + chr1_1:64550544-64550563 Msa0036140:CDS 35.0%
AACATTGAAGAGACAGATCA+GGG + chr1_1:64550545-64550564 Msa0036140:CDS 35.0%
CAATAGCAAGAATTGGAGTA+CGG + chr1_1:64550634-64550653 Msa0036140:CDS 35.0%
! GGATATTGATGATCTGGATA+AGG + chr1_1:64550670-64550689 Msa0036140:CDS 35.0%
AGTTAGCAGTTCTTGTATAC+AGG + chr1_1:64550805-64550824 Msa0036140:three_prime_UTR 35.0%
GGGTTAAGTATCATCAATTG+TGG - chr1_1:64550986-64551005 None:intergenic 35.0%
TTAACCCATGAATACATGTG+TGG + chr1_1:64550999-64551018 Msa0036140:three_prime_UTR 35.0%
TAACCCATGAATACATGTGT+GGG + chr1_1:64551000-64551019 Msa0036140:three_prime_UTR 35.0%
TTTCCCACACATGTATTCAT+GGG - chr1_1:64551006-64551025 None:intergenic 35.0%
TAACTATGGAGGGAACAAAT+TGG - chr1_1:64551032-64551051 None:intergenic 35.0%
CATACATAAGCTAACTATGG+AGG - chr1_1:64551043-64551062 None:intergenic 35.0%
TTCAGAGGACTCAATTTCAC+CGG - chr1_1:64545969-64545988 None:intergenic 40.0%
TGAATGGTAGAACAAGTGGT+AGG + chr1_1:64546072-64546091 Msa0036140:CDS 40.0%
GAATGGTAGAACAAGTGGTA+GGG + chr1_1:64546073-64546092 Msa0036140:CDS 40.0%
TTCCTCATTTGATCAACAGG+AGG - chr1_1:64546113-64546132 None:intergenic 40.0%
!!! TCACTTTTTAATGACGGGGT+TGG + chr1_1:64546137-64546156 Msa0036140:CDS 40.0%
AGTACTTCACCATCAACTTC+AGG + chr1_1:64546167-64546186 Msa0036140:CDS 40.0%
GTACTTCACCATCAACTTCA+GGG + chr1_1:64546168-64546187 Msa0036140:CDS 40.0%
ATTGAAAGCAGATTAGGTGG+TGG + chr1_1:64546296-64546315 Msa0036140:CDS 40.0%
TATAGGTCTATTCCGGATAC+TGG + chr1_1:64546374-64546393 Msa0036140:CDS 40.0%
TCAGGATATGACGAAGAAGA+TGG + chr1_1:64546413-64546432 Msa0036140:CDS 40.0%
GATATGACGAAGAAGATGGT+GGG + chr1_1:64546417-64546436 Msa0036140:CDS 40.0%
!! GTAATGGGTATCTTATCCAC+GGG - chr1_1:64546518-64546537 None:intergenic 40.0%
ATACCCATTACAGAATCCCA+TGG + chr1_1:64546527-64546546 Msa0036140:CDS 40.0%
TCACCGAGAAAATTTGCATG+TGG + chr1_1:64546586-64546605 Msa0036140:CDS 40.0%
ATACCCATTACAGAATCCCA+CGG + chr1_1:64546527-64546546 Msa0036140:CDS 40.0%
TATCCACAGGAAAATGCTCT+CGG - chr1_1:64546766-64546785 None:intergenic 40.0%
! TGTTTTATCAGCCCCACTAT+GGG - chr1_1:64546807-64546826 None:intergenic 40.0%
!! TTGTTTTATCAGCCCCACTA+TGG - chr1_1:64546808-64546827 None:intergenic 40.0%
AGAGGGAGATAATGTGGAAT+AGG - chr1_1:64546858-64546877 None:intergenic 40.0%
ATTATCTCCCTCTTACGCAA+AGG + chr1_1:64546865-64546884 Msa0036140:CDS 40.0%
TTACAGGTACTTCTCACTTG+AGG + chr1_1:64546891-64546910 Msa0036140:CDS 40.0%
TACAGGTACTTCTCACTTGA+GGG + chr1_1:64546892-64546911 Msa0036140:CDS 40.0%
ACTTCTCACTTGAGGGATTA+TGG + chr1_1:64546899-64546918 Msa0036140:CDS 40.0%
! AGTGATTTTCTATGCTCGCA+TGG + chr1_1:64546947-64546966 Msa0036140:CDS 40.0%
ATATTCCTCTGCCCAATTTC+AGG - chr1_1:64547088-64547107 None:intergenic 40.0%
AATGTGAGTTAAGTCCTTCC+AGG + chr1_1:64547122-64547141 Msa0036140:CDS 40.0%
! ATATTCATCTTGTGCTGCTC+TGG - chr1_1:64547185-64547204 None:intergenic 40.0%
TCATAGTCCAATCGACCATT+AGG - chr1_1:64547244-64547263 None:intergenic 40.0%
CGTCCAGATTTAGATAGAAC+TGG + chr1_1:64547316-64547335 Msa0036140:CDS 40.0%
TTAGAAACCTACAGACAAGC+TGG + chr1_1:64547667-64547686 Msa0036140:CDS 40.0%
GAAATCAAGTAAATGGGGTG+CGG + chr1_1:64547801-64547820 Msa0036140:CDS 40.0%
CTGCCTGTATATCTTATGGT+TGG - chr1_1:64547914-64547933 None:intergenic 40.0%
! AATGAGTTGGAGAATGGAGA+AGG + chr1_1:64547949-64547968 Msa0036140:CDS 40.0%
GGTGATATCCTCTTATCAGA+AGG - chr1_1:64547979-64547998 None:intergenic 40.0%
ACATGTCCCATAGAAACTTG+AGG - chr1_1:64548000-64548019 None:intergenic 40.0%
TTTCGCCTAGAAAAATGCTG+AGG - chr1_1:64548108-64548127 None:intergenic 40.0%
TTCTGATACCTTCTTTGGAC+AGG - chr1_1:64548327-64548346 None:intergenic 40.0%
TGTTTGTACTGCATCGTATG+TGG + chr1_1:64548363-64548382 Msa0036140:CDS 40.0%
! GGATCACGCTTTAGTTTATC+AGG + chr1_1:64548513-64548532 Msa0036140:intron 40.0%
TGATCTTATTGGCATGGGAT+TGG - chr1_1:64548588-64548607 None:intergenic 40.0%
AGTCACAAATCTTGCAGAAG+TGG + chr1_1:64548641-64548660 Msa0036140:intron 40.0%
!! GCTACTATGCTGCTTAGTTT+TGG + chr1_1:64548702-64548721 Msa0036140:intron 40.0%
GGAACACTGCTAGGATAAAT+TGG + chr1_1:64548850-64548869 Msa0036140:intron 40.0%
AGGATAAATTGGGACCTGAA+AGG + chr1_1:64548861-64548880 Msa0036140:intron 40.0%
! TGGGACCTGAAAGGTTTTTA+TGG + chr1_1:64548870-64548889 Msa0036140:intron 40.0%
CTCTTCTCATTACTATGCCA+TGG - chr1_1:64548932-64548951 None:intergenic 40.0%
!!! AGATTTTTAGTGGAACCAGG+TGG + chr1_1:64549049-64549068 Msa0036140:intron 40.0%
CAACCATAGATTCCCTCTAA+AGG - chr1_1:64549230-64549249 None:intergenic 40.0%
! CTTTAGAGGGAATCTATGGT+TGG + chr1_1:64549228-64549247 Msa0036140:intron 40.0%
!! GGAAGTTGATGACATACAAG+CGG + chr1_1:64549291-64549310 Msa0036140:intron 40.0%
CAGTTCCTCAAAGGAATTCA+TGG + chr1_1:64549750-64549769 Msa0036140:intron 40.0%
AGTGTCCATGAATTCCTTTG+AGG - chr1_1:64549758-64549777 None:intergenic 40.0%
! CTTTTATGTCCCATAAGGCT+GGG + chr1_1:64549797-64549816 Msa0036140:CDS 40.0%
TTCCTCAAGATACAGTAACC+TGG + chr1_1:64549884-64549903 Msa0036140:CDS 40.0%
TCCTCAAGATACAGTAACCT+GGG + chr1_1:64549885-64549904 Msa0036140:CDS 40.0%
CTGATGACAATCCTCAAAAC+TGG + chr1_1:64550001-64550020 Msa0036140:CDS 40.0%
TGACAATCCTCAAAACTGGA+AGG + chr1_1:64550005-64550024 Msa0036140:CDS 40.0%
!! TTGCAGGTAAAGGTTTTGTG+AGG + chr1_1:64550348-64550367 Msa0036140:intron 40.0%
!! TGCAGGTAAAGGTTTTGTGA+GGG + chr1_1:64550349-64550368 Msa0036140:intron 40.0%
AGAATAGTACTTTGGTCTGC+AGG - chr1_1:64550401-64550420 None:intergenic 40.0%
! TGCAGACCAAAGTACTATTC+TGG + chr1_1:64550400-64550419 Msa0036140:CDS 40.0%
AAGTTCTTGGGCACATTTGT+TGG + chr1_1:64550425-64550444 Msa0036140:CDS 40.0%
AGTTCTTGGGCACATTTGTT+GGG + chr1_1:64550426-64550445 Msa0036140:CDS 40.0%
TATCTTTCTGATAGCAACCG+GGG + chr1_1:64550476-64550495 Msa0036140:CDS 40.0%
TATGAGAGGATAAAATCCGG+AGG + chr1_1:64550509-64550528 Msa0036140:CDS 40.0%
ATGAGAGGATAAAATCCGGA+GGG + chr1_1:64550510-64550529 Msa0036140:CDS 40.0%
! CAGGAAGGATATTGATGATC+TGG + chr1_1:64550664-64550683 Msa0036140:CDS 40.0%
TGTGAATTATATGACCGCTC+AGG + chr1_1:64550880-64550899 Msa0036140:three_prime_UTR 40.0%
TTGGATACATTCATCCTGAG+CGG - chr1_1:64550897-64550916 None:intergenic 40.0%
CTTTCCCACACATGTATTCA+TGG - chr1_1:64551007-64551026 None:intergenic 40.0%
! TACCCAGCAAAGGGTTGATT+CGG + chr1_1:64545896-64545915 Msa0036140:CDS 45.0%
TCACGACGGTTTCTCCTAAA+CGG - chr1_1:64545930-64545949 None:intergenic 45.0%
TTTAGGAGAAACCGTCGTGA+TGG + chr1_1:64545930-64545949 Msa0036140:CDS 45.0%
TTAGGAGAAACCGTCGTGAT+GGG + chr1_1:64545931-64545950 Msa0036140:CDS 45.0%
GGTGAAATTGAGTCCTCTGA+AGG + chr1_1:64545968-64545987 Msa0036140:CDS 45.0%
! GAAATTGAGTCCTCTGAAGG+TGG + chr1_1:64545971-64545990 Msa0036140:CDS 45.0%
GTGGATGGAGTTAGAAGAGT+TGG + chr1_1:64545990-64546009 Msa0036140:CDS 45.0%
AGTTGGCAGTGGTAGCAAAA+GGG + chr1_1:64546007-64546026 Msa0036140:CDS 45.0%
!! GTGGTGGTGATGGATTTGAA+GGG + chr1_1:64546030-64546049 Msa0036140:CDS 45.0%
!! TGGTGATGGATTTGAAGGGA+GGG + chr1_1:64546034-64546053 Msa0036140:CDS 45.0%
TTGAAGGGAGGGATTCTGAT+TGG + chr1_1:64546045-64546064 Msa0036140:CDS 45.0%
CAAGTGGTAGGGTTCAATCT+AGG + chr1_1:64546084-64546103 Msa0036140:CDS 45.0%
CTCCTCCTGTTGATCAAATG+AGG + chr1_1:64546108-64546127 Msa0036140:CDS 45.0%
TCAGGGTTGAGACCTAGATA+TGG + chr1_1:64546185-64546204 Msa0036140:CDS 45.0%
CAGGGTTGAGACCTAGATAT+GGG + chr1_1:64546186-64546205 Msa0036140:CDS 45.0%
TGCTGACGACGACGAAAATT+TGG + chr1_1:64546235-64546254 Msa0036140:CDS 45.0%
ACACTTACACCACCAGTATC+CGG - chr1_1:64546389-64546408 None:intergenic 45.0%
GGTGGTGTAAGTGTAACATC+AGG + chr1_1:64546395-64546414 Msa0036140:CDS 45.0%
GGATATGACGAAGAAGATGG+TGG + chr1_1:64546416-64546435 Msa0036140:CDS 45.0%
CTGGGAGATTTGAGCATGAA+AGG + chr1_1:64546471-64546490 Msa0036140:CDS 45.0%
CCACCATGGGATTCTGTAAT+GGG - chr1_1:64546533-64546552 None:intergenic 45.0%
CCATTACAGAATCCCATGGT+GGG + chr1_1:64546531-64546550 Msa0036140:CDS 45.0%
CATTACAGAATCCCATGGTG+GGG + chr1_1:64546532-64546551 Msa0036140:CDS 45.0%
ATTACAGAATCCCATGGTGG+GGG + chr1_1:64546533-64546552 Msa0036140:CDS 45.0%
CAGGGAGATTTGAGCATGAA+AGG + chr1_1:64546645-64546664 Msa0036140:CDS 45.0%
TATCCACAGGCAAATGCTCT+CGG - chr1_1:64546679-64546698 None:intergenic 45.0%
AAACCCATCACAGAATCCCA+CGG + chr1_1:64546701-64546720 Msa0036140:CDS 45.0%
!!! GAGAGCATTTTCCTGTGGAT+AGG + chr1_1:64546765-64546784 Msa0036140:CDS 45.0%
CCACTATGGGATTGTGTGAT+GGG - chr1_1:64546794-64546813 None:intergenic 45.0%
CCATCACACAATCCCATAGT+GGG + chr1_1:64546792-64546811 Msa0036140:CDS 45.0%
CATCACACAATCCCATAGTG+GGG + chr1_1:64546793-64546812 Msa0036140:CDS 45.0%
TGCGTAAGAGGGAGATAATG+TGG - chr1_1:64546864-64546883 None:intergenic 45.0%
GGATTATGGAAACTGCTCCA+TGG + chr1_1:64546913-64546932 Msa0036140:CDS 45.0%
TTTCTATGCTCGCATGGTGA+TGG + chr1_1:64546953-64546972 Msa0036140:CDS 45.0%
! GAAAACTTGCAGAAGGTGCA+GGG + chr1_1:64547017-64547036 Msa0036140:CDS 45.0%
TAGTGTCTATAGGTGGCCTT+TGG - chr1_1:64547057-64547076 None:intergenic 45.0%
GCCACCTATAGACACTAGTA+GGG + chr1_1:64547060-64547079 Msa0036140:CDS 45.0%
CCACCTATAGACACTAGTAG+GGG + chr1_1:64547061-64547080 Msa0036140:CDS 45.0%
ACTAGTAGGGGTCCTGAAAT+TGG + chr1_1:64547073-64547092 Msa0036140:CDS 45.0%
CTAGTAGGGGTCCTGAAATT+GGG + chr1_1:64547074-64547093 Msa0036140:CDS 45.0%
ATAATCTGCATGCTCAGACC+TGG - chr1_1:64547143-64547162 None:intergenic 45.0%
GGACTATGAGCAAGCTGTAA+TGG + chr1_1:64547255-64547274 Msa0036140:CDS 45.0%
TGGACGTGAGATGTAATGTC+TGG - chr1_1:64547302-64547321 None:intergenic 45.0%
TTCATATCTGGATGCACCAG+AGG + chr1_1:64547537-64547556 Msa0036140:CDS 45.0%
CAGGAAATGAGTCAGCATGT+TGG + chr1_1:64547697-64547716 Msa0036140:CDS 45.0%
TGAACCTACCTGTCCAAAGA+AGG + chr1_1:64548316-64548335 Msa0036140:CDS 45.0%
GATACCTTCTTTGGACAGGT+AGG - chr1_1:64548323-64548342 None:intergenic 45.0%
ACTGCATCGTATGTGGTAGA+AGG + chr1_1:64548370-64548389 Msa0036140:CDS 45.0%
GGAAGAAAAGGAACACTGCT+AGG + chr1_1:64548841-64548860 Msa0036140:intron 45.0%
!! TTTTTAGTGGAACCAGGTGG+AGG + chr1_1:64549052-64549071 Msa0036140:intron 45.0%
! GCTTTTATGTCCCATAAGGC+TGG + chr1_1:64549796-64549815 Msa0036140:CDS 45.0%
ACCCAGGTTACTGTATCTTG+AGG - chr1_1:64549889-64549908 None:intergenic 45.0%
CTTATTGAGTAAAGGGGGAC+AGG + chr1_1:64550236-64550255 Msa0036140:intron 45.0%
!! GCAGGTAAAGGTTTTGTGAG+GGG + chr1_1:64550350-64550369 Msa0036140:intron 45.0%
ATCTTTCTGATAGCAACCGG+GGG + chr1_1:64550477-64550496 Msa0036140:CDS 45.0%
TGAGAGGATAAAATCCGGAG+GGG + chr1_1:64550511-64550530 Msa0036140:CDS 45.0%
TGGTTATGTGGCAATTGCAG+AGG + chr1_1:64550592-64550611 Msa0036140:CDS 45.0%
ATTGGAGTACGGTAAAGAGC+AGG + chr1_1:64550645-64550664 Msa0036140:CDS 45.0%
ATCCTGTTAAAACCGACGAG+AGG + chr1_1:64550693-64550712 Msa0036140:CDS 45.0%
GCAGTTCTTGTATACAGGAC+AGG + chr1_1:64550810-64550829 Msa0036140:three_prime_UTR 45.0%
GGATGATTAGACAGTCACCA+AGG + chr1_1:64550956-64550975 Msa0036140:three_prime_UTR 45.0%
TCATCAATTGTGGATGGCCT+TGG - chr1_1:64550976-64550995 None:intergenic 45.0%
CTTTGCTGGGTACGCAACTT+GGG - chr1_1:64545888-64545907 None:intergenic 50.0%
CAAGTTGCGTACCCAGCAAA+GGG + chr1_1:64545887-64545906 Msa0036140:CDS 50.0%
! ACCCAGCAAAGGGTTGATTC+GGG + chr1_1:64545897-64545916 Msa0036140:CDS 50.0%
ACCCGAATCAACCCTTTGCT+GGG - chr1_1:64545901-64545920 None:intergenic 50.0%
CACGACGGTTTCTCCTAAAC+GGG - chr1_1:64545929-64545948 None:intergenic 50.0%
! TTGAGTCCTCTGAAGGTGGA+TGG + chr1_1:64545975-64545994 Msa0036140:CDS 50.0%
CTAACTCCATCCACCTTCAG+AGG - chr1_1:64545984-64546003 None:intergenic 50.0%
GGAGTTAGAAGAGTTGGCAG+TGG + chr1_1:64545996-64546015 Msa0036140:CDS 50.0%
GAGTTGGCAGTGGTAGCAAA+AGG + chr1_1:64546006-64546025 Msa0036140:CDS 50.0%
GTTGGCAGTGGTAGCAAAAG+GGG + chr1_1:64546008-64546027 Msa0036140:CDS 50.0%
!! GGTGGTGGTGATGGATTTGA+AGG + chr1_1:64546029-64546048 Msa0036140:CDS 50.0%
!! GTGGTGATGGATTTGAAGGG+AGG + chr1_1:64546033-64546052 Msa0036140:CDS 50.0%
GGTCTCAACCCTGAAGTTGA+TGG - chr1_1:64546179-64546198 None:intergenic 50.0%
GTCAGCACCACCATAATCCA+TGG - chr1_1:64546222-64546241 None:intergenic 50.0%
AGGTCTATTCCGGATACTGG+TGG + chr1_1:64546377-64546396 Msa0036140:CDS 50.0%
TCATGCTCAAATCTCCCAGC+TGG - chr1_1:64546470-64546489 None:intergenic 50.0%
TATCCACGGGCAAATGCTCT+CGG - chr1_1:64546505-64546524 None:intergenic 50.0%
CCCATTACAGAATCCCATGG+TGG + chr1_1:64546530-64546549 Msa0036140:CDS 50.0%
CCCACCATGGGATTCTGTAA+TGG - chr1_1:64546534-64546553 None:intergenic 50.0%
CAGGACGGTTTGAGCATGAA+AGG + chr1_1:64546558-64546577 Msa0036140:CDS 50.0%
CCACCGTGGGATTCTGTAAT+GGG - chr1_1:64546620-64546639 None:intergenic 50.0%
TCCACCGTGGGATTCTGTAA+TGG - chr1_1:64546621-64546640 None:intergenic 50.0%
ATTACAGAATCCCACGGTGG+AGG + chr1_1:64546620-64546639 Msa0036140:CDS 50.0%
!! GAGAGCATTTGCCTGTGGAT+AGG + chr1_1:64546678-64546697 Msa0036140:CDS 50.0%
!! GTGATGGGTTTCCTATCCAC+AGG - chr1_1:64546692-64546711 None:intergenic 50.0%
TCACCGTGGGATTCTGTGAT+GGG - chr1_1:64546707-64546726 None:intergenic 50.0%
ATCACAGAATCCCACGGTGA+GGG + chr1_1:64546707-64546726 Msa0036140:CDS 50.0%
!!! TCACCGAGAGCATTTTCCTG+TGG + chr1_1:64546760-64546779 Msa0036140:CDS 50.0%
!! GTGATGGGTTTCCTATCCAC+AGG - chr1_1:64546692-64546711 None:intergenic 50.0%
CCCATCACACAATCCCATAG+TGG + chr1_1:64546791-64546810 Msa0036140:CDS 50.0%
CCCACTATGGGATTGTGTGA+TGG - chr1_1:64546795-64546814 None:intergenic 50.0%
GAAACTGCTCCATGGAAACG+AGG + chr1_1:64546921-64546940 Msa0036140:CDS 50.0%
ATCACTCCTCCTCGTTTCCA+TGG - chr1_1:64546933-64546952 None:intergenic 50.0%
TATGATCAGCCTAGGAGCAG+CGG + chr1_1:64546995-64547014 Msa0036140:CDS 50.0%
AGCAGCGGAAAACTTGCAGA+AGG + chr1_1:64547010-64547029 Msa0036140:CDS 50.0%
! GGAAAACTTGCAGAAGGTGC+AGG + chr1_1:64547016-64547035 Msa0036140:CDS 50.0%
! GGTTTAGTGGACATGGCCAA+AGG + chr1_1:64547038-64547057 Msa0036140:CDS 50.0%
GGCCACCTATAGACACTAGT+AGG + chr1_1:64547059-64547078 Msa0036140:CDS 50.0%
CCCCTACTAGTGTCTATAGG+TGG - chr1_1:64547064-64547083 None:intergenic 50.0%
GGACCCCTACTAGTGTCTAT+AGG - chr1_1:64547067-64547086 None:intergenic 50.0%
CCATTAGGAGCTACCCTTCT+AGG - chr1_1:64547229-64547248 None:intergenic 50.0%
CCTAGAAGGGTAGCTCCTAA+TGG + chr1_1:64547226-64547245 Msa0036140:CDS 50.0%
GGTAGCTCCTAATGGTCGAT+TGG + chr1_1:64547234-64547253 Msa0036140:CDS 50.0%
ATGTTGGATCCTGCGATGCA+GGG - chr1_1:64547399-64547418 None:intergenic 50.0%
TATGTTGGATCCTGCGATGC+AGG - chr1_1:64547400-64547419 None:intergenic 50.0%
! GGTGATGGCTATTTGCGTTC+TGG + chr1_1:64547466-64547485 Msa0036140:CDS 50.0%
AACCTTTCTTGCTGATGCCC+TGG - chr1_1:64547619-64547638 None:intergenic 50.0%
!! CGAACTTTGAAGGCATCCAG+AGG - chr1_1:64548807-64548826 None:intergenic 50.0%
! AGCTCTCATCCCAGCCTTAT+GGG - chr1_1:64549809-64549828 None:intergenic 50.0%
TAGCTCTCATCCCAGCCTTA+TGG - chr1_1:64549810-64549829 None:intergenic 50.0%
TTGGGCCAAAGCTTCAGCAT+GGG - chr1_1:64549926-64549945 None:intergenic 50.0%
TTTGGGCCAAAGCTTCAGCA+TGG - chr1_1:64549927-64549946 None:intergenic 50.0%
! TGCTGAAGCTTTGGCCCAAA+AGG + chr1_1:64549927-64549946 Msa0036140:CDS 50.0%
! TGAAGCTTTGGCCCAAAAGG+AGG + chr1_1:64549930-64549949 Msa0036140:CDS 50.0%
! TTGGGCACATTTGTTGGGCT+GGG + chr1_1:64550431-64550450 Msa0036140:CDS 50.0%
TCTCATAATCAGCTCTCCCC+CGG - chr1_1:64550496-64550515 None:intergenic 50.0%
GACAGATCAGGGAGACAAAG+TGG + chr1_1:64550556-64550575 Msa0036140:CDS 50.0%
TGTGGCAATTGCAGAGGACT+TGG + chr1_1:64550598-64550617 Msa0036140:CDS 50.0%
GAGTACGGTAAAGAGCAGGA+AGG + chr1_1:64550649-64550668 Msa0036140:CDS 50.0%
CTGTTAAAACCGACGAGAGG+CGG + chr1_1:64550696-64550715 Msa0036140:CDS 50.0%
TTATGATCACCGCCTCTCGT+CGG - chr1_1:64550708-64550727 None:intergenic 50.0%
CCTTTGCTGGGTACGCAACT+TGG - chr1_1:64545889-64545908 None:intergenic 55.0%
CCAAGTTGCGTACCCAGCAA+AGG + chr1_1:64545886-64545905 Msa0036140:CDS 55.0%
GACCCGAATCAACCCTTTGC+TGG - chr1_1:64545902-64545921 None:intergenic 55.0%
ATTCGGGTCCTGACCCGTTT+AGG + chr1_1:64545913-64545932 Msa0036140:CDS 55.0%
CGGTTTCTCCTAAACGGGTC+AGG - chr1_1:64545924-64545943 None:intergenic 55.0%
!! GAGAAACCGTCGTGATGGGT+TGG + chr1_1:64545935-64545954 Msa0036140:CDS 55.0%
ACGGATCCAACCCATCACGA+CGG - chr1_1:64545944-64545963 None:intergenic 55.0%
GGACTCAATTTCACCGGCGA+CGG - chr1_1:64545963-64545982 None:intergenic 55.0%
AGTGGTAGCAAAAGGGGTGG+TGG + chr1_1:64546014-64546033 Msa0036140:CDS 55.0%
! AGCAAAAGGGGTGGTGGTGA+TGG + chr1_1:64546020-64546039 Msa0036140:CDS 55.0%
CCCATTACAGAATCCCACGG+TGG + chr1_1:64546617-64546636 Msa0036140:CDS 55.0%
AATCCCACGGTGGAGGAACA+GGG + chr1_1:64546627-64546646 Msa0036140:CDS 55.0%
!! ACACCGAGAGCATTTGCCTG+TGG + chr1_1:64546673-64546692 Msa0036140:CDS 55.0%
CTCACCGTGGGATTCTGTGA+TGG - chr1_1:64546708-64546727 None:intergenic 55.0%
CATCACAGAATCCCACGGTG+AGG + chr1_1:64546706-64546725 Msa0036140:CDS 55.0%
AATCCCACGGTGAGGGAACA+GGG + chr1_1:64546714-64546733 Msa0036140:CDS 55.0%
TATCCCTGTTCCCTCACCGT+GGG - chr1_1:64546720-64546739 None:intergenic 55.0%
ATATCCCTGTTCCCTCACCG+TGG - chr1_1:64546721-64546740 None:intergenic 55.0%
ACTGCTCCATGGAAACGAGG+AGG + chr1_1:64546924-64546943 Msa0036140:CDS 55.0%
! GCAAGTTTTCCGCTGCTCCT+AGG - chr1_1:64547007-64547026 None:intergenic 55.0%
! GCAGAAGGTGCAGGGTTTAG+TGG + chr1_1:64547025-64547044 Msa0036140:CDS 55.0%
! GGTGCAGGGTTTAGTGGACA+TGG + chr1_1:64547031-64547050 Msa0036140:CDS 55.0%
TCTGCATGCTCAGACCTGGA+AGG - chr1_1:64547139-64547158 None:intergenic 55.0%
! CTCCAGGGCATCAGCAAGAA+AGG + chr1_1:64547614-64547633 Msa0036140:CDS 55.0%
CACTCTGCCAGCTTGTCTGT+AGG - chr1_1:64547677-64547696 None:intergenic 55.0%
AACTCCTCAGAGCCCTCAGT+TGG - chr1_1:64548246-64548265 None:intergenic 55.0%
! GAGCACTGTAAACCTCCACC+TGG - chr1_1:64549067-64549086 None:intergenic 55.0%
TACAGTAACCTGGGTTCCCC+AGG + chr1_1:64549894-64549913 Msa0036140:CDS 55.0%
TTCAGCATGGGGCAAGACCT+GGG - chr1_1:64549914-64549933 None:intergenic 55.0%
CTTGCCCCATGCTGAAGCTT+TGG + chr1_1:64549918-64549937 Msa0036140:CDS 55.0%
TGGGCCAAAGCTTCAGCATG+GGG - chr1_1:64549925-64549944 None:intergenic 55.0%
! CTTGGGCACATTTGTTGGGC+TGG + chr1_1:64550430-64550449 Msa0036140:CDS 55.0%
GGGGGAGAGCTGATTATGAG+AGG + chr1_1:64550495-64550514 Msa0036140:CDS 55.0%
GTTACAGCTTGTGACCCCTC+CGG - chr1_1:64550528-64550547 None:intergenic 55.0%
!!! CGCCTCTCGTCGGTTTTAAC+AGG - chr1_1:64550698-64550717 None:intergenic 55.0%
!! TGATGGGTTGGATCCGTCGC+CGG + chr1_1:64545947-64545966 Msa0036140:CDS 60.0%
GGCAGTGGTAGCAAAAGGGG+TGG + chr1_1:64546011-64546030 Msa0036140:CDS 60.0%
CCAGCTGGCACACTCCTTGA+CGG - chr1_1:64546455-64546474 None:intergenic 60.0%
! CGTCAAGGAGTGTGCCAGCT+GGG + chr1_1:64546453-64546472 Msa0036140:CDS 60.0%
!! TCACCGAGAGCATTTGCCCG+TGG + chr1_1:64546499-64546518 Msa0036140:CDS 60.0%
! GAATCCCATGGTGGGGGTAC+AGG + chr1_1:64546539-64546558 Msa0036140:CDS 60.0%
GAATCCCACGGTGGAGGAAC+AGG + chr1_1:64546626-64546645 Msa0036140:CDS 60.0%
TCTCCCTGTTCCTCCACCGT+GGG - chr1_1:64546633-64546652 None:intergenic 60.0%
ATCTCCCTGTTCCTCCACCG+TGG - chr1_1:64546634-64546653 None:intergenic 60.0%
GAATCCCACGGTGAGGGAAC+AGG + chr1_1:64546713-64546732 Msa0036140:CDS 60.0%
GGGGTCCTGAAATTGGGCAG+AGG + chr1_1:64547080-64547099 Msa0036140:CDS 60.0%
GCATAACCACCCTGCATCGC+AGG + chr1_1:64547387-64547406 Msa0036140:CDS 60.0%
TTGGATCCTGCGATGCAGGG+TGG - chr1_1:64547396-64547415 None:intergenic 60.0%
TCTCGAAGAGATGGCGCTCC+AGG + chr1_1:64547598-64547617 Msa0036140:CDS 60.0%
CTCGAAGAGATGGCGCTCCA+GGG + chr1_1:64547599-64547618 Msa0036140:CDS 60.0%
CAGACAAGCTGGCAGAGTGC+AGG + chr1_1:64547678-64547697 Msa0036140:CDS 60.0%
TGCAGAACCCGAGCCAACTG+AGG + chr1_1:64548230-64548249 Msa0036140:CDS 60.0%
GCAGAACCCGAGCCAACTGA+GGG + chr1_1:64548231-64548250 Msa0036140:CDS 60.0%
! TCAGAGCCCTCAGTTGGCTC+GGG - chr1_1:64548240-64548259 None:intergenic 60.0%
CTCAGAGCCCTCAGTTGGCT+CGG - chr1_1:64548241-64548260 None:intergenic 60.0%
TCAGCATGGGGCAAGACCTG+GGG - chr1_1:64549913-64549932 None:intergenic 60.0%
CTTCAGCATGGGGCAAGACC+TGG - chr1_1:64549915-64549934 None:intergenic 60.0%
! TTGGGCTGGGAGATGCAGAG+AGG + chr1_1:64550444-64550463 Msa0036140:CDS 60.0%
GGCGTTTGCCTCCACCGTCA+AGG + chr1_1:64546438-64546457 Msa0036140:CDS 65.0%
GGCACACTCCTTGACGGTGG+AGG - chr1_1:64546449-64546468 None:intergenic 65.0%
GCTGGCACACTCCTTGACGG+TGG - chr1_1:64546452-64546471 None:intergenic 65.0%
! CCGTCAAGGAGTGTGCCAGC+TGG + chr1_1:64546452-64546471 Msa0036140:CDS 65.0%
CCGTCCTGTACCCCCACCAT+GGG - chr1_1:64546546-64546565 None:intergenic 65.0%
! CCCATGGTGGGGGTACAGGA+CGG + chr1_1:64546543-64546562 Msa0036140:CDS 65.0%
ACCGTCCTGTACCCCCACCA+TGG - chr1_1:64546547-64546566 None:intergenic 65.0%
CGAGCCAACTGAGGGCTCTG+AGG + chr1_1:64548239-64548258 Msa0036140:CDS 65.0%
GGGCAAGACCTGGGGAACCC+AGG - chr1_1:64549905-64549924 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 64545837 64551089 64545837 ID=Msa0036140;Name=Msa0036140
chr1_1 mRNA 64545837 64551089 64545837 ID=Msa0036140-mRNA-1;Parent=Msa0036140;Name=Msa0036140-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|1|0.66|1|1|1|3|368|1077
chr1_1 exon 64545837 64548391 64545837 ID=Msa0036140-mRNA-1:exon:20657;Parent=Msa0036140-mRNA-1
chr1_1 exon 64549753 64550063 64549753 ID=Msa0036140-mRNA-1:exon:20658;Parent=Msa0036140-mRNA-1
chr1_1 exon 64550354 64551089 64550354 ID=Msa0036140-mRNA-1:exon:20659;Parent=Msa0036140-mRNA-1
chr1_1 CDS 64545837 64548391 64545837 ID=Msa0036140-mRNA-1:cds;Parent=Msa0036140-mRNA-1
chr1_1 CDS 64549753 64550063 64549753 ID=Msa0036140-mRNA-1:cds;Parent=Msa0036140-mRNA-1
chr1_1 CDS 64550354 64550721 64550354 ID=Msa0036140-mRNA-1:cds;Parent=Msa0036140-mRNA-1
chr1_1 three_prime_UTR 64550722 64551089 64550722 ID=Msa0036140-mRNA-1:three_prime_utr;Parent=Msa0036140-mRNA-1
Gene Sequence

>Msa0036140

ATGCAGTTCAGACAGCGCGAAGAAGATCATGTTTCAGTTTCTCTCTCTCCCAAGTTGCGTACCCAGCAAAGGGTTGATTCGGGTCCTGACCCGTTTAGGAGAAACCGTCGTGATGGGTTGGATCCGTCGCCGGTGAAATTGAGTCCTCTGAAGGTGGATGGAGTTAGAAGAGTTGGCAGTGGTAGCAAAAGGGGTGGTGGTGATGGATTTGAAGGGAGGGATTCTGATTGGCATTTGAATGGTAGAACAAGTGGTAGGGTTCAATCTAGGTCTCCTCCTGTTGATCAAATGAGGAAAAGGTCACTTTTTAATGACGGGGTTGGTTGTAGAAGTACTTCACCATCAACTTCAGGGTTGAGACCTAGATATGGGTATTCAAAAACCATGGATTATGGTGGTGCTGACGACGACGAAAATTTGGATATGAAACGTGTTTATCTTGATGGAGATAAGGATTTGATTGAAAGCAGATTAGGTGGTGGAAAGAGTATTGTGAATCAGAGGTTTTTGAGAAGTGAAAATGAAGTTGGAAGTTCATATAGGTCTATTCCGGATACTGGTGGTGTAAGTGTAACATCAGGATATGACGAAGAAGATGGTGGGCGTTTGCCTCCACCGTCAAGGAGTGTGCCAGCTGGGAGATTTGAGCATGAAAGGCTGCATCACCGAGAGCATTTGCCCGTGGATAAGATACCCATTACAGAATCCCATGGTGGGGGTACAGGACGGTTTGAGCATGAAAGGCTGCATCACCGAGAAAATTTGCATGTGGATAAGATACCCATTACAGAATCCCACGGTGGAGGAACAGGGAGATTTGAGCATGAAAGGCTGCAACACCGAGAGCATTTGCCTGTGGATAGGAAACCCATCACAGAATCCCACGGTGAGGGAACAGGGATATTTGAGCATGAAAGACTGCATCACCGAGAGCATTTTCCTGTGGATAGGAAACCCATCACACAATCCCATAGTGGGGCTGATAAAACAATGTTTTATGCAAGAGATAGGGATGCTTCCTATTCCACATTATCTCCCTCTTACGCAAAGGATTTTACAGGTACTTCTCACTTGAGGGATTATGGAAACTGCTCCATGGAAACGAGGAGGAGTGATTTTCTATGCTCGCATGGTGATGGTGTCTGTTCACTTTCATCTTATGATCAGCCTAGGAGCAGCGGAAAACTTGCAGAAGGTGCAGGGTTTAGTGGACATGGCCAAAGGCCACCTATAGACACTAGTAGGGGTCCTGAAATTGGGCAGAGGAATATTAGGTGCGACCATCAATGTGAGTTAAGTCCTTCCAGGTCTGAGCATGCAGATTATTTTAATTACAGATCACATTCCAGAGCAGCACAAGATGAATATATATACCAGTATGATGATATACCTAGAAGGGTAGCTCCTAATGGTCGATTGGACTATGAGCAAGCTGTAATGGAGTATGATAACAGGGAGTTGTCCAGACATTACATCTCACGTCCAGATTTAGATAGAACTGGTAAGAGTGAAGATTATTATGGAAATCCAAGAAGGGATATTATGCATGAGCATAACCACCCTGCATCGCAGGATCCAACATATGTAGACTATCATGATATGAGAAGAACATCAATTCAATCAAAACAGGGTGATGGCTATTTGCGTTCTGGATATAATCATACTGAAATTAGAAAAAGAATGCCAAATGATTATGAAGTTTCATATCTGGATGCACCAGAGGCATATCATCAAATATCAAATTATAGAACAGAATATGAATCTCGAAGAGATGGCGCTCCAGGGCATCAGCAAGAAAGGTTTCAGAGTTCACCTCTGTCTAAGCATGATTTAGAAACCTACAGACAAGCTGGCAGAGTGCAGGAAATGAGTCAGCATGTTGGCATTCATAACCATTCAGATAGACTTGTGAAAAGAAAATACTATGCCAATGAAGAAATAGATGTTCGTGATTTGAGAAAAATGAAATCAAGTAAATGGGGTGCGGCTGAAGAATATCAAGATTATTATGAAAGTGAAGAGTGGGTAGATGATGAAGACATGAATATGGCGTATTCATATAAAAATGTTGGATCCAACCATAAGATATACAGGCAGCATAAGAATAAATACAATGAGTTGGAGAATGGAGAAGGTTTTCCTTCTGATAAGAGGATATCACCTCAAGTTTCTATGGGACATGTACAAAGACCATCATTTCGATTTCAGAAGTATTCCAATCAAAATATAAGACATCATTCAAAGTCTAGTTCATCAAACTGGTATAAACCTCAGCATTTTTCTAGGCGAAATGCAAATCAAAAACAACCTAAAGGTTGGAAAAAGTATCATCATGGATATAATGAGAACAAGCATACGATTAATGACGAATCATATGAAGATGTGGCAAGTGCTGCAGAACCCGAGCCAACTGAGGGCTCTGAGGAGTTTTTACAAATGGTACATGAGAATTTCTTAACGTACTCCAAGAACTTGAATCTGAACCTACCTGTCCAAAGAAGGTATCAGAAACAAGGAAAAGCTGGTTGTTTGTACTGCATCGTATGTGGTAGAAGTTCCTCAAAGGAATTCATGGACACTCGAAGCTTAGTTACTCATGCTTTTATGTCCCATAAGGCTGGGATGAGAGCTAAACACTTGGGTCTTCACAAAGCAATATGTGTTATGATGGGATGGGATACTGATATTCCTCAAGATACAGTAACCTGGGTTCCCCAGGTCTTGCCCCATGCTGAAGCTTTGGCCCAAAAGGAGGATTTGATTCTTTGGCCACCAGTTGTTATCATCCATAATATTTCAATGTCTGATGACAATCCTCAAAACTGGAAGGTTATAAGTATGGAAACAATTGAGGCGTTTATAAGAGGTAAAGGTTTTGTGAGGGGACGAATCAAATTATGCTTAGGGAAGCCTGCAGACCAAAGTACTATTCTGGTGAAGTTCTTGGGCACATTTGTTGGGCTGGGAGATGCAGAGAGGATTCATAAATATCTTTCTGATAGCAACCGGGGGAGAGCTGATTATGAGAGGATAAAATCCGGAGGGGTCACAAGCTGTAACATTGAAGAGACAGATCAGGGAGACAAAGTGGAGAGTTTTCTTTATGGTTATGTGGCAATTGCAGAGGACTTGGAGAAACTAGATTTCAATAGCAAGAATTGGAGTACGGTAAAGAGCAGGAAGGATATTGATGATCTGGATAAGGATCCTGTTAAAACCGACGAGAGGCGGTGA
Protein sequence

>Msa0036140

MQFRQREEDHVSVSLSPKLRTQQRVDSGPDPFRRNRRDGLDPSPVKLSPLKVDGVRRVGSGSKRGGGDGFEGRDSDWHLNGRTSGRVQSRSPPVDQMRKRSLFNDGVGCRSTSPSTSGLRPRYGYSKTMDYGGADDDENLDMKRVYLDGDKDLIESRLGGGKSIVNQRFLRSENEVGSSYRSIPDTGGVSVTSGYDEEDGGRLPPPSRSVPAGRFEHERLHHREHLPVDKIPITESHGGGTGRFEHERLHHRENLHVDKIPITESHGGGTGRFEHERLQHREHLPVDRKPITESHGEGTGIFEHERLHHREHFPVDRKPITQSHSGADKTMFYARDRDASYSTLSPSYAKDFTGTSHLRDYGNCSMETRRSDFLCSHGDGVCSLSSYDQPRSSGKLAEGAGFSGHGQRPPIDTSRGPEIGQRNIRCDHQCELSPSRSEHADYFNYRSHSRAAQDEYIYQYDDIPRRVAPNGRLDYEQAVMEYDNRELSRHYISRPDLDRTGKSEDYYGNPRRDIMHEHNHPASQDPTYVDYHDMRRTSIQSKQGDGYLRSGYNHTEIRKRMPNDYEVSYLDAPEAYHQISNYRTEYESRRDGAPGHQQERFQSSPLSKHDLETYRQAGRVQEMSQHVGIHNHSDRLVKRKYYANEEIDVRDLRKMKSSKWGAAEEYQDYYESEEWVDDEDMNMAYSYKNVGSNHKIYRQHKNKYNELENGEGFPSDKRISPQVSMGHVQRPSFRFQKYSNQNIRHHSKSSSSNWYKPQHFSRRNANQKQPKGWKKYHHGYNENKHTINDESYEDVASAAEPEPTEGSEEFLQMVHENFLTYSKNLNLNLPVQRRYQKQGKAGCLYCIVCGRSSSKEFMDTRSLVTHAFMSHKAGMRAKHLGLHKAICVMMGWDTDIPQDTVTWVPQVLPHAEALAQKEDLILWPPVVIIHNISMSDDNPQNWKVISMETIEAFIRGKGFVRGRIKLCLGKPADQSTILVKFLGTFVGLGDAERIHKYLSDSNRGRADYERIKSGGVTSCNIEETDQGDKVESFLYGYVAIAEDLEKLDFNSKNWSTVKSRKDIDDLDKDPVKTDERR*