AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0114060

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0114060 MtrunA17_Chr1g0172641 88.571 700 17 3 1 639 1 698 0.0 1233
Msa0114060 MtrunA17_Chr1g0172651 98.988 494 3 1 645 1136 15 508 0.0 991
Msa0114060 MtrunA17_Chr3g0139801 62.478 573 146 6 91 639 23 550 0.0 630
Msa0114060 MtrunA17_Chr3g0139791 64.489 352 79 2 637 985 2 310 4.50e-132 404
Msa0114060 MtrunA17_Chr5g0440081 68.868 106 31 1 196 301 2 105 2.62e-37 135
Msa0114060 MtrunA17_Chr8g0352331 23.891 1105 661 43 97 1115 156 1166 2.01e-34 143
Msa0114060 MtrunA17_Chr3g0139781 58.416 101 17 1 1000 1075 20 120 1.88e-29 115
Msa0114060 MtrunA17_Chr5g0440071 47.967 123 23 1 91 172 26 148 2.56e-23 99.8
Msa0114060 MtrunA17_Chr5g0440091 59.740 77 18 1 368 444 1 64 5.41e-20 85.9
Msa0114060 MtrunA17_Chr7g0257431 38.554 83 47 2 1025 1106 35 114 6.96e-12 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0114060 AT2G27170.2 63.433 1206 368 6 1 1135 1 1204 0.0 1465
Msa0114060 AT2G27170.1 63.433 1206 368 6 1 1135 1 1204 0.0 1465
Msa0114060 AT2G27170.4 61.254 1053 338 4 1 985 1 1051 0.0 1238
Msa0114060 AT2G27170.3 61.254 1053 338 4 1 985 1 1051 0.0 1238
Msa0114060 AT5G62410.1 23.827 1108 658 39 97 1115 156 1166 2.15e-33 140
Msa0114060 AT5G48600.1 22.222 1269 748 43 1 1106 24 1216 3.01e-25 114
Msa0114060 AT5G48600.2 22.345 1262 758 45 1 1106 24 1219 4.07e-24 110
Msa0114060 AT3G47460.1 37.234 94 57 2 1 92 1 94 1.31e-12 73.2
Msa0114060 AT3G47460.2 37.234 94 57 2 1 92 1 94 1.33e-12 73.2
Msa0114060 AT3G54670.1 27.072 181 97 6 907 1077 1001 1156 4.45e-11 68.2

Find 205 sgRNAs with CRISPR-Local

Find 1333 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGCAACAAGCTTCTCTTTA+AGG 0.124157 1_3:+30439135 None:intergenic
TCTTTAAGGTCTTTGATTTC+AGG 0.126868 1_3:+30439149 None:intergenic
TTGAACTTCTTTGCTAAATA+TGG 0.172364 1_3:+30447619 None:intergenic
TGCAAAACTCAGAACATTTC+TGG 0.193624 1_3:-30443097 Msa0114060:CDS
CATAGAATTTAATCAATTAA+AGG 0.218683 1_3:+30432567 None:intergenic
AATATTTATTGTTAGAATAA+TGG 0.223614 1_3:-30445570 Msa0114060:intron
AATCTCGTCAAATAGATAAA+AGG 0.228063 1_3:+30435157 None:intergenic
CAAATTATTCTCCAAATCTT+TGG 0.239758 1_3:+30446168 None:intergenic
GAAATTCAAAGACACCTTCT+TGG 0.270306 1_3:+30439412 None:intergenic
GCAAGTGCTTTAGAAAATAA+TGG 0.273444 1_3:+30439434 None:intergenic
TCTACTCTCCCCTCTGGATT+TGG 0.277473 1_3:+30435670 None:intergenic
CCTCTTGAACAAAACTTATA+AGG 0.279604 1_3:+30432541 None:intergenic
GTAGATCCACGGAGAATATC+TGG 0.289789 1_3:-30432717 Msa0114060:three_prime_UTR
AGATATTAAGATGAATAAAA+AGG 0.304376 1_3:+30432759 None:intergenic
ATGTTTGATTTGATGTGTTT+AGG 0.305770 1_3:-30432642 Msa0114060:three_prime_UTR
TTGGATTTACTGAAGGAAAT+AGG 0.309154 1_3:-30447926 Msa0114060:CDS
ACCTCCCGATAGCTGTTTCA+TGG 0.309647 1_3:+30435238 None:intergenic
CAGTTCAGCAACTCAATAAT+TGG 0.313860 1_3:+30443064 None:intergenic
TGTTTGATTTGATGTGTTTA+GGG 0.317061 1_3:-30432641 Msa0114060:three_prime_UTR
TGAACTAGATTATCATATAA+AGG 0.320612 1_3:+30445829 None:intergenic
GAATCAGATTGAACAGCTTA+AGG 0.325972 1_3:-30439261 Msa0114060:CDS
CTAATCTAACCACTAATCTT+AGG 0.329155 1_3:-30438985 Msa0114060:CDS
CCACATTAAGGAGGAGGAAT+TGG 0.330392 1_3:-30440390 Msa0114060:CDS
CGGAGTCTTTCATCAAGGTT+AGG 0.342168 1_3:+30447954 None:intergenic
AACAGTTATCTGCAAGAATC+TGG 0.344787 1_3:-30440654 Msa0114060:CDS
ACTGTCAGCATTCTGCTTAA+TGG 0.349206 1_3:+30440415 None:intergenic
CTTTAAGGTCTTTGATTTCA+GGG 0.351655 1_3:+30439150 None:intergenic
AAACACCTTAATCAACAAAA+AGG 0.353161 1_3:-30442733 Msa0114060:CDS
CAGACACAAAATGCTGAATA+AGG 0.357538 1_3:-30434297 Msa0114060:intron
TGCTGACAGTATCCACATTA+AGG 0.368632 1_3:-30440402 Msa0114060:CDS
AAGGGAAGATCTCTGGAAAT+AGG 0.370840 1_3:-30446030 Msa0114060:CDS
TTCATTCTCTTTGCTCCATA+AGG 0.371923 1_3:+30443573 None:intergenic
AAGTTCCTCCCTCTTGGAAT+TGG 0.373248 1_3:+30438898 None:intergenic
ACAAGAGAAATCCAAAGATT+TGG 0.376912 1_3:-30446179 Msa0114060:CDS
ATCATCATCATAGATCCTTA+TGG 0.382267 1_3:-30443588 Msa0114060:intron
AAAGTTGCCGACAAGATATA+TGG 0.389830 1_3:-30434396 Msa0114060:CDS
AATTACTAAGGCCTATGTTA+TGG 0.391398 1_3:+30432818 None:intergenic
TAAAGCAAATATTACTACTT+TGG 0.391831 1_3:-30443787 Msa0114060:CDS
AGTCTTGATCATGCGATTCC+TGG 0.395423 1_3:-30443499 Msa0114060:CDS
AACCTCATTATACTTCTTTG+CGG 0.396057 1_3:+30446210 None:intergenic
TGCTCTAGAGTTCATTAATC+AGG 0.399310 1_3:-30434322 Msa0114060:CDS
ATCTGATGATGATGAGTCTA+TGG 0.416008 1_3:-30438930 Msa0114060:CDS
TTCTAAAGCACTTGCCAAGA+AGG 0.422752 1_3:-30439426 Msa0114060:intron
AGTAGAAAGAGACAGCCTTC+AGG 0.428009 1_3:-30443721 Msa0114060:CDS
ATCATTAAGTTCCTCCCTCT+TGG 0.432035 1_3:+30438892 None:intergenic
CATAGACATGATACGGCGCC+TGG 0.437832 1_3:-30434472 Msa0114060:intron
GCAGTTGGTGCTAATGGATC+TGG 0.438920 1_3:-30450666 Msa0114060:intron
AGTATTCTCTGAACTTGTAC+AGG 0.442344 1_3:-30437180 Msa0114060:CDS
AAAGTATACCAAGAAAATAA+AGG 0.442810 1_3:-30438508 Msa0114060:CDS
GACTTACAAGGGAAGATCTC+TGG 0.444139 1_3:-30446037 Msa0114060:CDS
GGAGTATAATAGAAGACATC+AGG 0.449480 1_3:-30438592 Msa0114060:CDS
TTGAAGTTACAGCAGGAAAC+AGG 0.452589 1_3:-30443018 Msa0114060:intron
AAATTCAATTTCTTTAAAAG+AGG 0.455404 1_3:+30442634 None:intergenic
TCGGCAACTTTCACTAGCTC+TGG 0.455767 1_3:+30434408 None:intergenic
AGGTGGTACTAGAGTTTATG+AGG 0.456658 1_3:-30447906 Msa0114060:CDS
GGTAGCTCGTACCAATGGTT+TGG 0.459742 1_3:-30440618 Msa0114060:CDS
TAAAGAATTAGAGCAATTGC+TGG 0.461497 1_3:-30438562 Msa0114060:CDS
TCAAAAGCATCTGATGTCAA+TGG 0.463495 1_3:+30438477 None:intergenic
TTTCAACATGTTCATTAAGC+AGG 0.467351 1_3:-30452239 Msa0114060:intron
TGAAGCACGGAAAGCAGAGC+TGG 0.467971 1_3:-30439011 Msa0114060:CDS
AACGAAATTGTCGACATTGA+AGG 0.469981 1_3:+30432880 None:intergenic
AATCAGATTGAACAGCTTAA+GGG 0.472543 1_3:-30439260 Msa0114060:CDS
ATCTCGTCAAATAGATAAAA+GGG 0.475350 1_3:+30435158 None:intergenic
ATCAAGACGAGGATGGTCCT+CGG 0.477677 1_3:-30435696 Msa0114060:CDS
GTATGGCAAAGATAAGTGTA+AGG 0.477924 1_3:+30435198 None:intergenic
GCTAAATATGGCATATTCCA+AGG 0.478359 1_3:+30447631 None:intergenic
GGGAGAGTAGAAAAGTACAT+TGG 0.478684 1_3:-30435658 Msa0114060:CDS
TGACGAGATTGATGCAGCAT+TGG 0.487759 1_3:-30435144 Msa0114060:CDS
AGATGAAATTAATAAATTGA+AGG 0.489199 1_3:-30438695 Msa0114060:intron
GGAGCATTTACTCTGTTAAG+TGG 0.489316 1_3:+30442691 None:intergenic
GATGAAAGACTCCGAGCGAT+TGG 0.490296 1_3:-30447945 Msa0114060:CDS
ACGAAATTGTCGACATTGAA+GGG 0.490300 1_3:+30432881 None:intergenic
CCGTGGATCTACGGTTATCA+TGG 0.490989 1_3:+30432728 None:intergenic
TAGCCAAGTTGAATGTTTGA+AGG 0.491963 1_3:+30452760 None:intergenic
CAAGTTCAGAGAATACTTCT+CGG 0.493867 1_3:+30437186 None:intergenic
AGTCCTAGAGTTAACTGTGT+TGG 0.504256 1_3:-30451746 Msa0114060:intron
TCAATAGAGCGCACTTTCAA+AGG 0.504820 1_3:-30437224 Msa0114060:CDS
TGACAAGCAGAGAAAATCCT+TGG 0.504851 1_3:-30447648 Msa0114060:CDS
TTTCAACAGCTTATTTCATG+TGG 0.504980 1_3:-30442791 Msa0114060:intron
TATTAGGTGTACTATTTGCA+TGG 0.505603 1_3:-30432928 Msa0114060:intron
CCCTCTGGATTTGGTTCCCG+AGG 0.506286 1_3:+30435679 None:intergenic
CAGAACATTTCTGGAGTTCA+CGG 0.506346 1_3:-30443088 Msa0114060:CDS
GAATCTGGATGTGGCTTCAA+AGG 0.507465 1_3:-30440639 Msa0114060:CDS
CAAAAGCATCTGATGTCAAT+GGG 0.507767 1_3:+30438478 None:intergenic
TAGGAGAAGAAAACAAGAGC+TGG 0.507827 1_3:-30438966 Msa0114060:CDS
CGTCTAAATACTGTACAACT+TGG 0.508951 1_3:+30447726 None:intergenic
CTTGATGTCAAAGACTTACA+AGG 0.509155 1_3:-30446049 Msa0114060:CDS
GTAAAGCTGCTCGTGATAAG+TGG 0.513738 1_3:-30445487 Msa0114060:CDS
ACCGCAGTTGAAGTTACAGC+AGG 0.517048 1_3:-30443025 Msa0114060:CDS
TGCCATACAGAGATGTGATC+CGG 0.517388 1_3:-30435183 Msa0114060:CDS
TCGTGATAAGTGGCTTCAAA+AGG 0.524706 1_3:-30445477 Msa0114060:CDS
GAAGAGGGTTGAATTCAGTT+CGG 0.524749 1_3:-30443126 Msa0114060:CDS
TTCTCTCTACAGGAAGGGGC+TGG 0.525303 1_3:-30450325 Msa0114060:intron
AGCATCAACCTTCTGCTGCT+CGG 0.526825 1_3:+30439526 None:intergenic
TCTGGTTATGATGAAGAAGA+AGG 0.527345 1_3:-30437144 Msa0114060:intron
GGAGTCTTTCATCAAGGTTA+GGG 0.530679 1_3:+30447955 None:intergenic
ACCAAGAAAATAAAGGAACT+TGG 0.531605 1_3:-30438501 Msa0114060:CDS
TTGGACATGACAGGTTCAAA+CGG 0.532727 1_3:-30437865 Msa0114060:intron
CCAATTCCTCCTCCTTAATG+TGG 0.532876 1_3:+30440390 None:intergenic
TTACCAACACAGTTAACTCT+AGG 0.532980 1_3:+30451743 None:intergenic
GGAACTAGACGAGGAGAAAG+AGG 0.534006 1_3:-30447693 Msa0114060:CDS
AGATATTCTCCGTGGATCTA+CGG 0.534345 1_3:+30432719 None:intergenic
CCTCAGTACAGAACTGCTGT+TGG 0.534499 1_3:-30435119 Msa0114060:CDS
TGCCGGATCACATCTCTGTA+TGG 0.535228 1_3:+30435181 None:intergenic
TTAATTGATTAAATTCTATG+TGG 0.536081 1_3:-30432564 Msa0114060:three_prime_UTR
AAGCTAACCTGACTGAATGC+TGG 0.536188 1_3:+30442595 None:intergenic
GGAAGAGGCTGCAGAACAGT+TGG 0.536294 1_3:-30445905 Msa0114060:CDS
TGACTTTCATAGACATGATA+CGG 0.538047 1_3:-30434479 Msa0114060:intron
GTATTTAGACGAGAGGTTGA+AGG 0.538710 1_3:-30447714 Msa0114060:CDS
TTGGCTGCAGTCTATGGAGG+AGG 0.540488 1_3:-30438613 Msa0114060:intron
ACAGGAAGGGGCTGGACACT+CGG 0.547884 1_3:-30450317 Msa0114060:intron
GCACTTTCAAAGGTGTTGCT+AGG 0.548129 1_3:-30437214 Msa0114060:CDS
CAGTCCATGAAACAGCTATC+GGG 0.548386 1_3:-30435242 Msa0114060:CDS
AGACAAGCTGAACTTGATGC+AGG 0.548754 1_3:-30437713 Msa0114060:CDS
ATTGAGAGCAGAAGTTGAGA+AGG 0.549014 1_3:-30443530 Msa0114060:CDS
AAAACCTACGCAGTGAGGAT+AGG 0.550494 1_3:-30450461 Msa0114060:CDS
CAGAGATAGAAGAGCTTAAG+CGG 0.550591 1_3:-30439484 Msa0114060:CDS
GCAGCAGTTAACAAAAGAGC+AGG 0.553436 1_3:+30432843 None:intergenic
CTTCAGTAAATCCAATCGCT+CGG 0.561412 1_3:+30447934 None:intergenic
TCAAGACGAGGATGGTCCTC+GGG 0.561921 1_3:-30435695 Msa0114060:CDS
CGAGCGATTGGATTTACTGA+AGG 0.563083 1_3:-30447933 Msa0114060:CDS
TCAAATAGATAAAAGGGTGC+CGG 0.563152 1_3:+30435164 None:intergenic
TCGCTCGGAGTCTTTCATCA+AGG 0.564117 1_3:+30447949 None:intergenic
CTACACTCCAGCATTCAGTC+AGG 0.566976 1_3:-30442602 Msa0114060:intron
ATCAAACATAACACAGGCAA+GGG 0.567059 1_3:-30445426 Msa0114060:intron
TAATTGCTATGTCACGTGAA+AGG 0.568481 1_3:-30443758 Msa0114060:CDS
GAGTGTTTGCTATGTCTGCC+AGG 0.570912 1_3:+30434454 None:intergenic
CATCAAACATAACACAGGCA+AGG 0.571116 1_3:-30445427 Msa0114060:CDS
CTCTGGAAATAGGCGTGCCA+AGG 0.572223 1_3:-30446020 Msa0114060:intron
AGTCACTCCATATATCTTGT+CGG 0.574755 1_3:+30434389 None:intergenic
CAGTATCCACATTAAGGAGG+AGG 0.575421 1_3:-30440396 Msa0114060:CDS
TCAAAGGTAGCTCGTACCAA+TGG 0.575939 1_3:-30440623 Msa0114060:CDS
TAATTTGAAAGATATAACTA+AGG 0.577008 1_3:-30446152 Msa0114060:CDS
TTGGACTGCATAACACTGGA+AGG 0.580092 1_3:-30440599 Msa0114060:intron
ATCACTTAACACAAAACGAA+TGG 0.580151 1_3:+30450491 None:intergenic
ATACCTTCAAACATTCAACT+TGG 0.580745 1_3:-30452763 Msa0114060:five_prime_UTR
TAGATCCACGGAGAATATCT+GGG 0.585556 1_3:-30432716 Msa0114060:three_prime_UTR
TCTGTGATCATAAAATCCTC+CGG 0.586231 1_3:+30440463 None:intergenic
ACAGTCCATGAAACAGCTAT+CGG 0.587300 1_3:-30435243 Msa0114060:CDS
TGTTATGCAGTCCAAACCAT+TGG 0.589083 1_3:+30440607 None:intergenic
GAATAAAATACAAGGCTCGA+TGG 0.590027 1_3:-30445872 Msa0114060:CDS
TTGCAAGACTGATCGCATTG+AGG 0.590062 1_3:-30439114 Msa0114060:intron
CAGTTAACAAAAGAGCAGGT+TGG 0.590679 1_3:+30432847 None:intergenic
TCTTGTTACCGAGCAGCAGA+AGG 0.596244 1_3:-30439534 Msa0114060:CDS
ATCCGCAAAGAAGTATAATG+AGG 0.599544 1_3:-30446212 Msa0114060:CDS
ATGTGCAGGATGTTAGAAGA+GGG 0.599871 1_3:-30443141 Msa0114060:intron
TTCTGAGAGCTGATATAGGT+CGG 0.600653 1_3:+30432904 None:intergenic
TTGTACAGTATTTAGACGAG+AGG 0.601877 1_3:-30447721 Msa0114060:CDS
TATCTGCAAGAATCTGGATG+TGG 0.602042 1_3:-30440648 Msa0114060:CDS
AGCTGATGGAAGAAATTCAA+CGG 0.603393 1_3:-30443854 Msa0114060:CDS
CATGCCTATCCTCACTGCGT+AGG 0.605441 1_3:+30450457 None:intergenic
AGAGATAGAAGAGCTTAAGC+GGG 0.605946 1_3:-30439483 Msa0114060:CDS
TGAACTTGATGCAGGAGATG+AGG 0.607188 1_3:-30437705 Msa0114060:intron
TCCTGCTGTAACTTCAACTG+CGG 0.607414 1_3:+30443024 None:intergenic
TGCTCAACAAAAGCTTGCAG+AGG 0.607778 1_3:-30447594 Msa0114060:intron
AGTATACTTTATCAAAAGCA+AGG 0.608236 1_3:-30445530 Msa0114060:CDS
AAAGAATTAGAGCAATTGCT+GGG 0.609019 1_3:-30438561 Msa0114060:CDS
AGGGTTCTGAGAGCTGATAT+AGG 0.611922 1_3:+30432900 None:intergenic
GATGATGATCAAGACGAGGA+TGG 0.611923 1_3:-30435703 Msa0114060:CDS
ACTTAATGATGCAAAAGTGT+TGG 0.612617 1_3:-30438879 Msa0114060:CDS
GTATTCTCTGAACTTGTACA+GGG 0.613150 1_3:-30437179 Msa0114060:CDS
TATTTGGCTGCAGTCTATGG+AGG 0.615570 1_3:-30438616 Msa0114060:intron
GATAGAACAAGCTCGGAACA+AGG 0.616516 1_3:-30446245 Msa0114060:CDS
TATGGCAAAGATAAGTGTAA+GGG 0.620771 1_3:+30435199 None:intergenic
TAATATCAAGTCTAGATCAA+CGG 0.620777 1_3:-30437256 Msa0114060:CDS
ATTCTCTGAACTTGTACAGG+GGG 0.623659 1_3:-30437177 Msa0114060:CDS
TAATTCAGACAATCGTATCC+CGG 0.625351 1_3:-30450263 Msa0114060:intron
TGGTTTGGACTGCATAACAC+TGG 0.626774 1_3:-30440603 Msa0114060:CDS
ATACTTGAGAATAAAATACA+AGG 0.629528 1_3:-30445880 Msa0114060:CDS
CATTGATCATTTAACACCAG+AGG 0.629638 1_3:-30439198 Msa0114060:CDS
AACTGCTGCTACCATAACAT+AGG 0.631067 1_3:-30432829 Msa0114060:three_prime_UTR
CCATGATAACCGTAGATCCA+CGG 0.631458 1_3:-30432728 Msa0114060:three_prime_UTR
GTACTAGAGTTTATGAGGAG+AGG 0.632212 1_3:-30447901 Msa0114060:CDS
ATCAAGTCTAGATCAACGGA+AGG 0.632478 1_3:-30437252 Msa0114060:CDS
AATGTGCAGGATGTTAGAAG+AGG 0.642397 1_3:-30443142 Msa0114060:intron
CTCTGTGGATAAGTGACGCG+AGG 0.643850 1_3:+30442670 None:intergenic
TAAACACATCAAATCAAACA+TGG 0.645204 1_3:+30432644 None:intergenic
CAACTTTCACTAGCTCTGGA+CGG 0.648302 1_3:+30434412 None:intergenic
CTTTAAAAGAGGTATGACAT+CGG 0.649454 1_3:+30442645 None:intergenic
GAGAAGAAAACAAGAGCTGG+AGG 0.650142 1_3:-30438963 Msa0114060:CDS
TGCTGATGCCAATTCCAAGA+GGG 0.651145 1_3:-30438906 Msa0114060:CDS
CGATGATGATGATCAAGACG+AGG 0.651573 1_3:-30435707 Msa0114060:CDS
CTTTCAAAACCTACGCAGTG+AGG 0.659816 1_3:-30450466 Msa0114060:CDS
TCCTCGGGAACCAAATCCAG+AGG 0.664489 1_3:-30435680 Msa0114060:CDS
TTGATGTCAAAGACTTACAA+GGG 0.664824 1_3:-30446048 Msa0114060:CDS
CCTCGGGAACCAAATCCAGA+GGG 0.665132 1_3:-30435679 Msa0114060:CDS
TATTCTCTGAACTTGTACAG+GGG 0.676095 1_3:-30437178 Msa0114060:CDS
TGATGCCAATTCCAAGAGGG+AGG 0.677675 1_3:-30438903 Msa0114060:CDS
GAGGTTGAAGGAACTAGACG+AGG 0.680578 1_3:-30447702 Msa0114060:CDS
TCCATGAAACAGCTATCGGG+AGG 0.684031 1_3:-30435239 Msa0114060:CDS
TTTCGGATATAACATTAACA+CGG 0.684048 1_3:+30434349 None:intergenic
TCGAGAGCAAATTGCCACAG+AGG 0.686171 1_3:-30451774 Msa0114060:CDS
GATTTACTGAAGGAAATAGG+TGG 0.687534 1_3:-30447923 Msa0114060:CDS
TCATCATAACCAGATGACCA+TGG 0.692755 1_3:+30437153 None:intergenic
GCTTTCATCAAACATAACAC+AGG 0.700247 1_3:-30445432 Msa0114060:CDS
TGACAGTATCCACATTAAGG+AGG 0.700442 1_3:-30440399 Msa0114060:CDS
GACATGACAGGTTCAAACGG+AGG 0.700593 1_3:-30437862 Msa0114060:intron
TTCTCTGAACTTGTACAGGG+GGG 0.709062 1_3:-30437176 Msa0114060:CDS
TTGCTGATGCCAATTCCAAG+AGG 0.709781 1_3:-30438907 Msa0114060:CDS
CGGCTTAATGATGAAATGCG+TGG 0.719466 1_3:-30443834 Msa0114060:CDS
CCAACAGCAGTTCTGTACTG+AGG 0.722486 1_3:+30435119 None:intergenic
ACAGACCCAGATATTCTCCG+TGG 0.729753 1_3:+30432711 None:intergenic
GGTATGACATCGGAACTCTG+TGG 0.736154 1_3:+30442655 None:intergenic
CTCGGGAACCAAATCCAGAG+GGG 0.743912 1_3:-30435678 Msa0114060:CDS
TCTAGGACTGAAATCCTCTG+TGG 0.746177 1_3:+30451760 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATAAGCAAATATTATT+TGG + chr1_3:30433335-30433354 None:intergenic 10.0%
!!! TATTATTTTCAAAATATTAC+CGG + chr1_3:30435043-30435062 None:intergenic 10.0%
!! AAGTAATTTAATTAATGATA+TGG - chr1_3:30436465-30436484 Msa0114060:intron 10.0%
!!! TTTTCAATTAATATTTTGTT+TGG - chr1_3:30437931-30437950 Msa0114060:intron 10.0%
!!! TTTCAATTAATATTTTGTTT+GGG - chr1_3:30437932-30437951 Msa0114060:intron 10.0%
!! AATATTTATTGTTAGAATAA+TGG - chr1_3:30439714-30439733 Msa0114060:intron 10.0%
!!! TTTTGTATTTTATTTACATA+TGG - chr1_3:30442721-30442740 Msa0114060:CDS 10.0%
!!! TTTGTATTTTATTTACATAT+GGG - chr1_3:30442722-30442741 Msa0114060:CDS 10.0%
!! AAATTTGATATGAAATTATT+TGG - chr1_3:30443194-30443213 Msa0114060:intron 10.0%
!! TGTTTATTTACTAATATTAA+AGG + chr1_3:30444948-30444967 None:intergenic 10.0%
!!! TTTTACTTAATTTTTTTTAG+AGG - chr1_3:30446856-30446875 Msa0114060:intron 10.0%
!!! TTTACTTAATTTTTTTTAGA+GGG - chr1_3:30446857-30446876 Msa0114060:intron 10.0%
!!! TATTTTTCAATGAATATTTT+TGG - chr1_3:30447237-30447256 Msa0114060:intron 10.0%
!!! TTTTCATTAAGTTTTTTATT+TGG - chr1_3:30449066-30449085 Msa0114060:intron 10.0%
!!! TTTCATTAAGTTTTTTATTT+GGG - chr1_3:30449067-30449086 Msa0114060:intron 10.0%
!!! TTGTTTATTTTTTATTTTTG+GGG - chr1_3:30451296-30451315 Msa0114060:intron 10.0%
!! TAAAGAAAAGTTAATATTTA+AGG - chr1_3:30452260-30452279 Msa0114060:five_prime_UTR 10.0%
!! GAAAAAATGATATTATTAAA+AGG + chr1_3:30452318-30452337 None:intergenic 10.0%
!!! TTTATTGATTTGATTTTTGT+AGG - chr1_3:30433008-30433027 Msa0114060:intron 15.0%
!! AACAGAAGTAAAAATATAAA+AGG + chr1_3:30434884-30434903 None:intergenic 15.0%
!!! ATTATTTTCAAAATATTACC+GGG + chr1_3:30435042-30435061 None:intergenic 15.0%
!! TTATAATGTAATTAAACCAA+AGG + chr1_3:30435118-30435137 None:intergenic 15.0%
!! CATTCAAATAATTATAAATG+CGG + chr1_3:30437736-30437755 None:intergenic 15.0%
!! ATTAATTGAAAACAAAAACA+AGG + chr1_3:30437923-30437942 None:intergenic 15.0%
!!! AATTTTTTATTGATCTATGA+AGG + chr1_3:30438916-30438935 None:intergenic 15.0%
!! TCATAGATCAATAAAAAATT+AGG - chr1_3:30438916-30438935 Msa0114060:CDS 15.0%
!! TAATTTGAAAGATATAACTA+AGG - chr1_3:30439132-30439151 Msa0114060:CDS 15.0%
!! TCTCATTTAACAATAAAATT+TGG - chr1_3:30439603-30439622 Msa0114060:intron 15.0%
!! AAATTCTTGAAAAATTAAAC+AGG + chr1_3:30440975-30440994 None:intergenic 15.0%
!!! ATTTTGAATAAGATGTATTA+GGG - chr1_3:30441916-30441935 Msa0114060:intron 15.0%
!!! GTATTATAATTTTGCATATT+TGG - chr1_3:30442444-30442463 Msa0114060:intron 15.0%
!!! AAATTCAATTTCTTTAAAAG+AGG + chr1_3:30442653-30442672 None:intergenic 15.0%
!!! ATATTTTTTTACAACATAGT+GGG + chr1_3:30443035-30443054 None:intergenic 15.0%
!!! TATATTTTTTTACAACATAG+TGG + chr1_3:30443036-30443055 None:intergenic 15.0%
!! GGTTATTATGATTAATTAAA+GGG - chr1_3:30443863-30443882 Msa0114060:CDS 15.0%
!! AGAAAATAACATTCTTATTA+CGG - chr1_3:30444303-30444322 Msa0114060:intron 15.0%
!!! TCAGTTATAATATTTCTATT+AGG - chr1_3:30444597-30444616 Msa0114060:intron 15.0%
!!! TATTTCTTTCAAACATTTTA+TGG + chr1_3:30445068-30445087 None:intergenic 15.0%
!! AAAACAATGAATAATCTAAA+AGG + chr1_3:30445543-30445562 None:intergenic 15.0%
!! AGATGAAATTAATAAATTGA+AGG - chr1_3:30446589-30446608 Msa0114060:intron 15.0%
!!! TATTCTTTTAAATCGTTTAA+TGG - chr1_3:30446615-30446634 Msa0114060:intron 15.0%
!!! ATGAAACATTTAAAATATCA+AGG + chr1_3:30447296-30447315 None:intergenic 15.0%
!! AAAAAGAATATCACAAATAT+AGG + chr1_3:30447814-30447833 None:intergenic 15.0%
!! AAAAAAGAAATGTTGATATT+GGG + chr1_3:30449050-30449069 None:intergenic 15.0%
!! ATTGTTTATTTATTACTGTT+AGG - chr1_3:30450691-30450710 Msa0114060:intron 15.0%
!!! CGTATGATAAATTTTAAAAA+AGG + chr1_3:30451354-30451373 None:intergenic 15.0%
!! ATAATAACAATTCATAAACA+GGG + chr1_3:30452234-30452253 None:intergenic 15.0%
!! AATAATAACAATTCATAAAC+AGG + chr1_3:30452235-30452254 None:intergenic 15.0%
!!! GTTAATATTTAAGGTTTATT+TGG - chr1_3:30452269-30452288 Msa0114060:intron 15.0%
!! AAATGATATTATTAAAAGGA+AGG + chr1_3:30452314-30452333 None:intergenic 15.0%
!! ATTATCTCTTATGTATTATT+AGG - chr1_3:30452340-30452359 Msa0114060:intron 15.0%
!! GATTTACAAAAATTAATGAA+GGG + chr1_3:30452506-30452525 None:intergenic 15.0%
!! AGATATTAAGATGAATAAAA+AGG + chr1_3:30452528-30452547 None:intergenic 15.0%
!! CATAGAATTTAATCAATTAA+AGG + chr1_3:30452720-30452739 None:intergenic 15.0%
!! TTAATTGATTAAATTCTATG+TGG - chr1_3:30452720-30452739 Msa0114060:five_prime_UTR 15.0%
!! AATTGAAGTAAAAATCATCT+CGG + chr1_3:30432741-30432760 None:intergenic 20.0%
!! TATAGAAAATTACATACGAA+TGG - chr1_3:30433199-30433218 Msa0114060:intron 20.0%
!!! TTTTTTAATGAACCTAGAAA+GGG + chr1_3:30433256-30433275 None:intergenic 20.0%
!!! ATTTTTTAATGAACCTAGAA+AGG + chr1_3:30433257-30433276 None:intergenic 20.0%
!! TTCTAGGTTCATTAAAAAAT+TGG - chr1_3:30433257-30433276 Msa0114060:intron 20.0%
!! CTTAAAAAGAAAAAGAATTG+TGG + chr1_3:30433893-30433912 None:intergenic 20.0%
!!! CACAATTCTTTTTCTTTTTA+AGG - chr1_3:30433891-30433910 Msa0114060:intron 20.0%
!! CTTTATTAAGATTGTAATTC+TGG - chr1_3:30434222-30434241 Msa0114060:intron 20.0%
!! ACTTCACATTAATAAACAAA+AGG + chr1_3:30434510-30434529 None:intergenic 20.0%
!! TTCATTTATATTAGTAGACA+AGG - chr1_3:30435065-30435084 Msa0114060:intron 20.0%
!! AATTGTATTAACATAAACTC+TGG - chr1_3:30435245-30435264 Msa0114060:CDS 20.0%
!! ATTGTATTAACATAAACTCT+GGG - chr1_3:30435246-30435265 Msa0114060:CDS 20.0%
!!! ATTAATCTCTACCTTTTAAA+TGG - chr1_3:30436145-30436164 Msa0114060:intron 20.0%
!! ATGTATAATTAAGAGGAATA+TGG + chr1_3:30436333-30436352 None:intergenic 20.0%
!! GAAAAATGATGAGTTAAAAA+TGG + chr1_3:30436357-30436376 None:intergenic 20.0%
!! ATTTATTCTTATTCCATTCA+TGG - chr1_3:30436389-30436408 Msa0114060:intron 20.0%
!! TTAAATTACTTCTCAACTTA+AGG + chr1_3:30436456-30436475 None:intergenic 20.0%
!! AGTATTTATCATCTTTCTTT+AGG + chr1_3:30437114-30437133 None:intergenic 20.0%
!! ATTGTCTATTAAATCCATTT+AGG - chr1_3:30437803-30437822 Msa0114060:CDS 20.0%
!! ATTGTTAGTATTAAAGAGAT+TGG - chr1_3:30438029-30438048 Msa0114060:intron 20.0%
!!! TTTTATTAGACAGATAGAAT+GGG + chr1_3:30438190-30438209 None:intergenic 20.0%
!!! TTTTTATTAGACAGATAGAA+TGG + chr1_3:30438191-30438210 None:intergenic 20.0%
!! TTTATAGCAGAAACAAATAT+CGG + chr1_3:30438435-30438454 None:intergenic 20.0%
!!! ATAATTGTACACTTTTTTGT+CGG - chr1_3:30438890-30438909 Msa0114060:CDS 20.0%
!! GAAGACTATAACTATAAATT+TGG + chr1_3:30438945-30438964 None:intergenic 20.0%
!! ATACTTGAGAATAAAATACA+AGG - chr1_3:30439404-30439423 Msa0114060:intron 20.0%
!! TGAACTAGATTATCATATAA+AGG + chr1_3:30439458-30439477 None:intergenic 20.0%
!!! TTTTTAATCAGCTTTTCATT+AGG - chr1_3:30439979-30439998 Msa0114060:intron 20.0%
!! ACAATAAATGTTGAAATTTG+GGG + chr1_3:30440816-30440835 None:intergenic 20.0%
!! GACAATAAATGTTGAAATTT+GGG + chr1_3:30440817-30440836 None:intergenic 20.0%
!! TAAAGCAAATATTACTACTT+TGG - chr1_3:30441497-30441516 Msa0114060:intron 20.0%
!!! GATTTTGAATAAGATGTATT+AGG - chr1_3:30441915-30441934 Msa0114060:intron 20.0%
!! AGTTCTCTGTAATTATATAA+TGG - chr1_3:30441960-30441979 Msa0114060:intron 20.0%
!!! TGTATTTTTGTTTTGGAAAT+GGG - chr1_3:30442338-30442357 Msa0114060:intron 20.0%
!! AAAAAGTAAATTACATGCAA+TGG + chr1_3:30442385-30442404 None:intergenic 20.0%
!! TTTATTTACATATGGGTATA+TGG - chr1_3:30442729-30442748 Msa0114060:CDS 20.0%
!! TGATAAACGTAATTCTTAAA+TGG - chr1_3:30442777-30442796 Msa0114060:CDS 20.0%
!! TAATTCTTAAATGGTTTATC+TGG - chr1_3:30442786-30442805 Msa0114060:intron 20.0%
!!! TATTTTTTTACAACATAGTG+GGG + chr1_3:30443034-30443053 None:intergenic 20.0%
!!! TGACTATTGTACATTTTTAT+TGG - chr1_3:30443371-30443390 Msa0114060:intron 20.0%
!! ATACTCATAATTGTTCTTTA+AGG + chr1_3:30443564-30443583 None:intergenic 20.0%
!!! AATGGATCATTGTTTTATTT+AGG - chr1_3:30443840-30443859 Msa0114060:CDS 20.0%
!!! ATGGATCATTGTTTTATTTA+GGG - chr1_3:30443841-30443860 Msa0114060:CDS 20.0%
!! GGGTTATTATGATTAATTAA+AGG - chr1_3:30443862-30443881 Msa0114060:CDS 20.0%
!!! TACATCTTAGGTTTTTATAT+TGG - chr1_3:30443964-30443983 Msa0114060:intron 20.0%
!!! ACATCTTAGGTTTTTATATT+GGG - chr1_3:30443965-30443984 Msa0114060:intron 20.0%
!! AAATATTATAACTGATGTCA+TGG + chr1_3:30444592-30444611 None:intergenic 20.0%
!!! TTATGTTATAATACGTGTTT+TGG - chr1_3:30445168-30445187 Msa0114060:intron 20.0%
!! TTGATGTTCATAATATGTAT+AGG - chr1_3:30446210-30446229 Msa0114060:CDS 20.0%
!! TGATGTTCATAATATGTATA+GGG - chr1_3:30446211-30446230 Msa0114060:CDS 20.0%
!!! TGCAAAATTTGAAGTTAAAA+TGG + chr1_3:30446250-30446269 None:intergenic 20.0%
!! ATATAGATATAAGACAACAT+TGG + chr1_3:30446471-30446490 None:intergenic 20.0%
!! AAAGTATACCAAGAAAATAA+AGG - chr1_3:30446776-30446795 Msa0114060:intron 20.0%
!! ACAGAAGTTATTTAAGAAAA+AGG - chr1_3:30447169-30447188 Msa0114060:intron 20.0%
!!! TGTAGTTTTAATGTGATTTT+TGG - chr1_3:30447871-30447890 Msa0114060:intron 20.0%
!!! TGATTTTTGGTTTTAAGTTT+GGG - chr1_3:30447884-30447903 Msa0114060:intron 20.0%
!!! GATTTTCTGCAATTATTTAA+TGG + chr1_3:30448001-30448020 None:intergenic 20.0%
!!! ATTTAACTTAGAATTTAGCA+AGG + chr1_3:30448447-30448466 None:intergenic 20.0%
!!! TATAAATGAAAAATTGACTC+CGG + chr1_3:30448516-30448535 None:intergenic 20.0%
!! ATGGATTTATATAGTCATAA+AGG + chr1_3:30448652-30448671 None:intergenic 20.0%
!! TTATGACTATATAAATCCAT+AGG - chr1_3:30448652-30448671 Msa0114060:intron 20.0%
!!! CTATTTTTACTAATATAGAC+TGG + chr1_3:30448830-30448849 None:intergenic 20.0%
!! GAAAAAAGAAATGTTGATAT+TGG + chr1_3:30449051-30449070 None:intergenic 20.0%
!!! TTATATCACTCATTAATTTG+AGG + chr1_3:30449248-30449267 None:intergenic 20.0%
!! TAAAACATCAATTTATCTCT+TGG + chr1_3:30449490-30449509 None:intergenic 20.0%
!!! TATATTTTATTTCCTCTCTT+AGG - chr1_3:30449544-30449563 Msa0114060:intron 20.0%
!!! TATTTAGTTCTTTTGTTTTC+TGG - chr1_3:30449781-30449800 Msa0114060:intron 20.0%
!!! TGATATTAGAAATTTGTTCA+TGG - chr1_3:30450722-30450741 Msa0114060:intron 20.0%
!! TCCAAAAAAAATTAAGAGTT+CGG + chr1_3:30451129-30451148 None:intergenic 20.0%
!! AATCCAGATTATAAGAAAAA+TGG - chr1_3:30451615-30451634 Msa0114060:intron 20.0%
!!! AAACCATTTTTCTTATAATC+TGG + chr1_3:30451621-30451640 None:intergenic 20.0%
!!! GTTAACTTGAACAAAATTAA+TGG + chr1_3:30451732-30451751 None:intergenic 20.0%
!! TAATAACAATTCATAAACAG+GGG + chr1_3:30452233-30452252 None:intergenic 20.0%
!!! ATCAAACTTTTGAATTACTA+AGG + chr1_3:30452481-30452500 None:intergenic 20.0%
!! GGATTTACAAAAATTAATGA+AGG + chr1_3:30452507-30452526 None:intergenic 20.0%
!!! TGATTTGATTTTTGTAGGTT+TGG - chr1_3:30433013-30433032 Msa0114060:intron 25.0%
!!! ACTTTTGTTGTAATATACTC+TGG - chr1_3:30433121-30433140 Msa0114060:intron 25.0%
! TAAGCAAAAATTACTGATCT+AGG - chr1_3:30433153-30433172 Msa0114060:intron 25.0%
! CATTAAAAAATTGGTGTATC+TGG - chr1_3:30433266-30433285 Msa0114060:intron 25.0%
! TTGCTTATAATAGTGATAGA+AGG - chr1_3:30433343-30433362 Msa0114060:intron 25.0%
! AAGAATATAAAGGACATTGA+AGG + chr1_3:30433414-30433433 None:intergenic 25.0%
!!! TCCTTTATATTCTTGCTTTT+TGG - chr1_3:30433420-30433439 Msa0114060:intron 25.0%
! TCCAAAAAGCAAGAATATAA+AGG + chr1_3:30433424-30433443 None:intergenic 25.0%
!!! TGGACTTGTATCTTTTTTTA+AGG - chr1_3:30433462-30433481 Msa0114060:intron 25.0%
!!! TTTTTTAAGGTTGTCATTGA+AGG - chr1_3:30433475-30433494 Msa0114060:intron 25.0%
! TAATTACGAATGATATTTGC+CGG - chr1_3:30433770-30433789 Msa0114060:intron 25.0%
! CAGTATTACTCTTTGTAAAA+TGG - chr1_3:30433840-30433859 Msa0114060:intron 25.0%
!! TAAAATGGAAACTTTTCCTA+TGG - chr1_3:30433855-30433874 Msa0114060:intron 25.0%
! AAGAAAAAGAATTGTGGAAT+AGG + chr1_3:30433887-30433906 None:intergenic 25.0%
!! GAAAGACAATTTTCATGAAA+AGG - chr1_3:30433916-30433935 Msa0114060:intron 25.0%
! ACTATGTAGATATAGTATCA+GGG - chr1_3:30434140-30434159 Msa0114060:intron 25.0%
!! TTCAAAGATTTGTTCCAAAA+TGG + chr1_3:30434306-30434325 None:intergenic 25.0%
! AAAGTATGTACTTTCCAAAA+AGG + chr1_3:30434435-30434454 None:intergenic 25.0%
!! AAATGTATTTTTCTCTCTAC+AGG - chr1_3:30434949-30434968 Msa0114060:intron 25.0%
! ATTTATATTAGTAGACAAGG+AGG - chr1_3:30435068-30435087 Msa0114060:intron 25.0%
! CCAAAGGAACTTAAAAAAAT+TGG + chr1_3:30435102-30435121 None:intergenic 25.0%
!!! CCAATTTTTTTAAGTTCCTT+TGG - chr1_3:30435099-30435118 Msa0114060:intron 25.0%
! TTTCCAGAAAATTAGAGTAT+TGG + chr1_3:30435219-30435238 None:intergenic 25.0%
! TTGTATTAACATAAACTCTG+GGG - chr1_3:30435247-30435266 Msa0114060:CDS 25.0%
!!! TTTTTAAGTTGTCTATCGAA+GGG + chr1_3:30435300-30435319 None:intergenic 25.0%
!!! TTTTTTAAGTTGTCTATCGA+AGG + chr1_3:30435301-30435320 None:intergenic 25.0%
! TTAGTAAGTAAGGTTAGTAT+GGG + chr1_3:30435371-30435390 None:intergenic 25.0%
! TTTAGTAAGTAAGGTTAGTA+TGG + chr1_3:30435372-30435391 None:intergenic 25.0%
! AACCTTACTTACTAAATCTT+TGG - chr1_3:30435376-30435395 Msa0114060:intron 25.0%
! ATCCAAAGATTTAGTAAGTA+AGG + chr1_3:30435381-30435400 None:intergenic 25.0%
! TTACTTACTAAATCTTTGGA+TGG - chr1_3:30435380-30435399 Msa0114060:intron 25.0%
! AACATATCATAGAACTTTAG+AGG + chr1_3:30435431-30435450 None:intergenic 25.0%
! TTGGAAAGAGTTGTTTAAAA+AGG + chr1_3:30435479-30435498 None:intergenic 25.0%
! ACAAAGATTATGAGTTTATG+AGG + chr1_3:30435507-30435526 None:intergenic 25.0%
!! ATAATCTTTGTCTGAAATGA+TGG - chr1_3:30435516-30435535 Msa0114060:intron 25.0%
!! TAATCTTTGTCTGAAATGAT+GGG - chr1_3:30435517-30435536 Msa0114060:intron 25.0%
! TTGTCAATCTATCAACATAA+AGG - chr1_3:30436221-30436240 Msa0114060:intron 25.0%
! TATCAACATAAAGGATCTAT+AGG - chr1_3:30436230-30436249 Msa0114060:intron 25.0%
! ATCTGATAGAAAAGAGATTA+TGG - chr1_3:30436263-30436282 Msa0114060:intron 25.0%
! AAATGGCATGTATAATTAAG+AGG + chr1_3:30436340-30436359 None:intergenic 25.0%
! TAATTAATGATATGGTTCTC+TGG - chr1_3:30436473-30436492 Msa0114060:intron 25.0%
! AATTAATGATATGGTTCTCT+GGG - chr1_3:30436474-30436493 Msa0114060:intron 25.0%
!! AGTATTTTTCCTATTTGTGT+CGG - chr1_3:30436897-30436916 Msa0114060:intron 25.0%
! TAACTACTCAAATAACCAAA+GGG + chr1_3:30437080-30437099 None:intergenic 25.0%
! ATAACTACTCAAATAACCAA+AGG + chr1_3:30437081-30437100 None:intergenic 25.0%
!!! ATCATCTTTCTTTAGGATAT+AGG + chr1_3:30437107-30437126 None:intergenic 25.0%
! AAAGATGATAAATACTTTGC+AGG - chr1_3:30437118-30437137 Msa0114060:intron 25.0%
!! GCATTATTTTCAAACTTTCA+CGG + chr1_3:30437411-30437430 None:intergenic 25.0%
! TGAAAGTTTGAAAATAATGC+AGG - chr1_3:30437411-30437430 Msa0114060:intron 25.0%
! TTGAACTTCTTTGCTAAATA+TGG + chr1_3:30437668-30437687 None:intergenic 25.0%
!!! TTTTGTTAATTCTTGCTGTA+TGG - chr1_3:30437840-30437859 Msa0114060:CDS 25.0%
! AACAATTGAGAACTGTAATT+CGG + chr1_3:30438015-30438034 None:intergenic 25.0%
!! GTGTTGATGTATTATATTTC+TGG + chr1_3:30438099-30438118 None:intergenic 25.0%
! AAGTTTATGTCCAAAGAAAA+TGG + chr1_3:30438276-30438295 None:intergenic 25.0%
!! CCAAACAATGTTATTGATTA+GGG - chr1_3:30438380-30438399 Msa0114060:intron 25.0%
!! TCTCTAAATTTGTGATGTTT+TGG - chr1_3:30438610-30438629 Msa0114060:intron 25.0%
! CAAATTATTCTCCAAATCTT+TGG + chr1_3:30439119-30439138 None:intergenic 25.0%
!! GAACTTCTTTTTCTTTGATA+AGG + chr1_3:30439168-30439187 None:intergenic 25.0%
! TCATCATTAGAATTATACCT+TGG + chr1_3:30439284-30439303 None:intergenic 25.0%
! AAAGAAAAAGACATTACCAA+GGG - chr1_3:30439479-30439498 Msa0114060:CDS 25.0%
!! ACAATAAAATTTGGAGTAGT+TGG - chr1_3:30439612-30439631 Msa0114060:intron 25.0%
! AGTATACTTTATCAAAAGCA+AGG - chr1_3:30439754-30439773 Msa0114060:intron 25.0%
!! GGAATTATCAGTTTTTCATT+AGG - chr1_3:30439942-30439961 Msa0114060:intron 25.0%
!! TAGGAAAAACTGTCATATTT+TGG + chr1_3:30440222-30440241 None:intergenic 25.0%
! GACATATTCTACTTTATTGT+TGG - chr1_3:30440271-30440290 Msa0114060:intron 25.0%
! GGACAATAAATGTTGAAATT+TGG + chr1_3:30440818-30440837 None:intergenic 25.0%
! AAAAGCCTCTTATAAGAAAT+GGG + chr1_3:30441107-30441126 None:intergenic 25.0%
!!! AGAAACAAATTTTAAGTGTC+TGG + chr1_3:30441143-30441162 None:intergenic 25.0%
! TGTGTAGACTTAATAAGAAT+TGG - chr1_3:30441235-30441254 Msa0114060:intron 25.0%
! GTGTAGACTTAATAAGAATT+GGG - chr1_3:30441236-30441255 Msa0114060:intron 25.0%
! TAAGATTTATGAACCTAACA+CGG + chr1_3:30441306-30441325 None:intergenic 25.0%
! GTTAGGTTCATAAATCTTAT+TGG - chr1_3:30441307-30441326 Msa0114060:intron 25.0%
!!! TTTGTTGACTGAGTATTTTA+CGG - chr1_3:30441377-30441396 Msa0114060:intron 25.0%
!!! TGCTATTTTTCAATGCATAA+AGG - chr1_3:30441842-30441861 Msa0114060:intron 25.0%
! TATTATTATCTGTCCAGTTT+GGG - chr1_3:30442057-30442076 Msa0114060:intron 25.0%
!!! GTGTATTTTTGTTTTGGAAA+TGG - chr1_3:30442337-30442356 Msa0114060:intron 25.0%
!!! GTATTTTTGTTTTGGAAATG+GGG - chr1_3:30442339-30442358 Msa0114060:intron 25.0%
! ATAATACCAATAAAGAGATC+AGG + chr1_3:30442431-30442450 None:intergenic 25.0%
! AAACACCTTAATCAACAAAA+AGG - chr1_3:30442551-30442570 Msa0114060:intron 25.0%
! CATTATAACTCCTAGAATTT+GGG - chr1_3:30442812-30442831 Msa0114060:intron 25.0%
! ATTGGATGAGAATATGATTA+AGG + chr1_3:30442900-30442919 None:intergenic 25.0%
! TTAACTGTTGTATTTGTCAT+TGG + chr1_3:30443146-30443165 None:intergenic 25.0%
! GATATGAAATTATTTGGTAG+AGG - chr1_3:30443200-30443219 Msa0114060:intron 25.0%
!!! TTTGTTTTATTATAGAGTGC+AGG - chr1_3:30443333-30443352 Msa0114060:intron 25.0%
!!! TGGATCATTGTTTTATTTAG+GGG - chr1_3:30443842-30443861 Msa0114060:CDS 25.0%
!!! ACATTACAACTGGTTTTATA+AGG + chr1_3:30444001-30444020 None:intergenic 25.0%
! TTAAAAGAGTTAGTAAAGAG+AGG + chr1_3:30444032-30444051 None:intergenic 25.0%
!! TCTCTTTACTAACTCTTTTA+AGG - chr1_3:30444031-30444050 Msa0114060:intron 25.0%
!!! ATTCAGAAAGCATATTTTGA+GGG - chr1_3:30444376-30444395 Msa0114060:intron 25.0%
!! CTTCAAACCTAAATTTTACT+TGG - chr1_3:30444517-30444536 Msa0114060:intron 25.0%
! ATGTAGACCAAGTAAAATTT+AGG + chr1_3:30444527-30444546 None:intergenic 25.0%
!!! TTGTACATTCTCCATTTTTT+TGG - chr1_3:30444970-30444989 Msa0114060:intron 25.0%
! ATGAGTTCTTACCAAAAAAA+TGG + chr1_3:30444984-30445003 None:intergenic 25.0%
!! CAAACATTTTATGGTAATCA+AGG + chr1_3:30445059-30445078 None:intergenic 25.0%
! ACATAACCAGAAAAAATCAA+AGG + chr1_3:30445154-30445173 None:intergenic 25.0%
! AAGATACCAGAAGAAAATAA+TGG + chr1_3:30445279-30445298 None:intergenic 25.0%
!! ATTATTTTCTTCTGGTATCT+TGG - chr1_3:30445278-30445297 Msa0114060:intron 25.0%
!! GAATTGCTTTATTAGAAATG+TGG - chr1_3:30445365-30445384 Msa0114060:intron 25.0%
!!! TTTCTTTTTGACTCTAGTAT+AGG - chr1_3:30445477-30445496 Msa0114060:CDS 25.0%
!!! TTCTTTTTGACTCTAGTATA+GGG - chr1_3:30445478-30445497 Msa0114060:CDS 25.0%
!!! TTTGTCTTGTGCTAATTTTT+TGG - chr1_3:30445560-30445579 Msa0114060:intron 25.0%
! AGAATGAATCACAAAACTAA+TGG + chr1_3:30445635-30445654 None:intergenic 25.0%
!!! TTTTTGGCAAGGAATAAAAT+AGG + chr1_3:30445664-30445683 None:intergenic 25.0%
!!! TCTTTTCTGAAATAACTTGT+AGG - chr1_3:30445978-30445997 Msa0114060:intron 25.0%
!!! GAAAAAATTTTGGTCAAACA+AGG + chr1_3:30446515-30446534 None:intergenic 25.0%
!!! TTGACCAAAATTTTTTCTTC+AGG - chr1_3:30446518-30446537 Msa0114060:intron 25.0%
!! AACTCCTGAAGAAAAAATTT+TGG + chr1_3:30446525-30446544 None:intergenic 25.0%
! TCCTTAATGATGAAGTTATT+TGG - chr1_3:30446652-30446671 Msa0114060:intron 25.0%
!! TAGAAAGGAATATGATTTTC+AGG + chr1_3:30447101-30447120 None:intergenic 25.0%
! TATAAAACACAACCAATAGA+TGG + chr1_3:30447219-30447238 None:intergenic 25.0%
!! TTCGAACAAATGATTTTTCA+TGG - chr1_3:30447722-30447741 Msa0114060:CDS 25.0%
! CACATTAAAACTACATTACA+GGG + chr1_3:30447866-30447885 None:intergenic 25.0%
! TCACATTAAAACTACATTAC+AGG + chr1_3:30447867-30447886 None:intergenic 25.0%
!!! GTGATTTTTGGTTTTAAGTT+TGG - chr1_3:30447883-30447902 Msa0114060:intron 25.0%
! TAATATCAAGTCTAGATCAA+CGG - chr1_3:30448028-30448047 Msa0114060:intron 25.0%
! ATGCAATCACAAAAATTGAT+GGG + chr1_3:30448197-30448216 None:intergenic 25.0%
! AATGCAATCACAAAAATTGA+TGG + chr1_3:30448198-30448217 None:intergenic 25.0%
!! ATCAATTTTTGTGATTGCAT+TGG - chr1_3:30448197-30448216 Msa0114060:intron 25.0%
!! TGAAGTATTTCTCCTATAAA+AGG + chr1_3:30448326-30448345 None:intergenic 25.0%
! AATGTCAACTTCTCAAATTT+AGG - chr1_3:30448345-30448364 Msa0114060:intron 25.0%
! CCTTAAAATCAACTAAAAGA+TGG + chr1_3:30448471-30448490 None:intergenic 25.0%
!!! CCATCTTTTAGTTGATTTTA+AGG - chr1_3:30448468-30448487 Msa0114060:intron 25.0%
!!! TAGTTGATTTTAAGGCAAAA+TGG - chr1_3:30448476-30448495 Msa0114060:intron 25.0%
! TTTACTAATATAGACTGGAA+GGG + chr1_3:30448825-30448844 None:intergenic 25.0%
!! TTTTACTAATATAGACTGGA+AGG + chr1_3:30448826-30448845 None:intergenic 25.0%
! AAAAACCAATGATAAGAATG+TGG + chr1_3:30448853-30448872 None:intergenic 25.0%
! GAAGAATACTAGAATATTCT+TGG + chr1_3:30449304-30449323 None:intergenic 25.0%
! GACTTTAAACATTCAAAAAG+TGG + chr1_3:30449714-30449733 None:intergenic 25.0%
!! GAATGTTTAAAGTCAGAAAA+CGG - chr1_3:30449720-30449739 Msa0114060:intron 25.0%
! ATATTAATGTTCATGTCTTG+AGG - chr1_3:30449756-30449775 Msa0114060:intron 25.0%
! AGAGATGAATTACATTCAAT+TGG - chr1_3:30449813-30449832 Msa0114060:intron 25.0%
! ATCTCGTCAAATAGATAAAA+GGG + chr1_3:30450129-30450148 None:intergenic 25.0%
! AATCTCGTCAAATAGATAAA+AGG + chr1_3:30450130-30450149 None:intergenic 25.0%
!! AAGTATCCATTTTATCATTG+TGG - chr1_3:30450188-30450207 Msa0114060:intron 25.0%
!! AGTATCCATTTTATCATTGT+GGG - chr1_3:30450189-30450208 Msa0114060:intron 25.0%
! ATAATACAAGAACAGACATT+GGG + chr1_3:30450229-30450248 None:intergenic 25.0%
! AATAATACAAGAACAGACAT+TGG + chr1_3:30450230-30450249 None:intergenic 25.0%
! TTAAGGCTTATATATTCCAA+TGG + chr1_3:30450349-30450368 None:intergenic 25.0%
! ATATATAAGCCTTAAGTATG+TGG - chr1_3:30450354-30450373 Msa0114060:intron 25.0%
! GTTTATTTATTACTGTTAGG+TGG - chr1_3:30450694-30450713 Msa0114060:intron 25.0%
! TTTCGGATATAACATTAACA+CGG + chr1_3:30450938-30450957 None:intergenic 25.0%
!!! ACCGAACTCTTAATTTTTTT+TGG - chr1_3:30451125-30451144 Msa0114060:intron 25.0%
!!! TATGTTCAACGTCTTTTTTT+AGG - chr1_3:30451394-30451413 Msa0114060:intron 25.0%
!!! ATGTTCAACGTCTTTTTTTA+GGG - chr1_3:30451395-30451414 Msa0114060:intron 25.0%
! GAATTGTACCAAATTTATAC+TGG + chr1_3:30451476-30451495 None:intergenic 25.0%
! ATAATCTGGATTTCTTAAAG+CGG + chr1_3:30451607-30451626 None:intergenic 25.0%
! TTGTATGAAAGTGATTATCA+TGG - chr1_3:30451769-30451788 Msa0114060:CDS 25.0%
!!! AATCCGTTTTTTCAGAAAAA+GGG + chr1_3:30451853-30451872 None:intergenic 25.0%
! GAAAGATGAAATTAAAGTTG+TGG - chr1_3:30452020-30452039 Msa0114060:intron 25.0%
! ACTTGCATTAAAGATTCATA+TGG - chr1_3:30452102-30452121 Msa0114060:intron 25.0%
!!! AATATGGACCCTTTTATTTA+GGG + chr1_3:30452203-30452222 None:intergenic 25.0%
!!! TAATATGGACCCTTTTATTT+AGG + chr1_3:30452204-30452223 None:intergenic 25.0%
! TAAATAAAAGGGTCCATATT+AGG - chr1_3:30452203-30452222 Msa0114060:intron 25.0%
! AAATAAAAGGGTCCATATTA+GGG - chr1_3:30452204-30452223 Msa0114060:intron 25.0%
! TAAACACATCAAATCAAACA+TGG + chr1_3:30452643-30452662 None:intergenic 25.0%
!!! ATGTTTGATTTGATGTGTTT+AGG - chr1_3:30452642-30452661 Msa0114060:intron 25.0%
!!! TGTTTGATTTGATGTGTTTA+GGG - chr1_3:30452643-30452662 Msa0114060:intron 25.0%
ATACCTTCAAACATTCAACT+TGG - chr1_3:30432521-30432540 Msa0114060:three_prime_UTR 30.0%
TTTCAACATGTTCATTAAGC+AGG - chr1_3:30433045-30433064 Msa0114060:intron 30.0%
GAAAATTACATACGAATGGA+AGG - chr1_3:30433203-30433222 Msa0114060:intron 30.0%
TAAGCAAATATTATTTGGCC+AGG + chr1_3:30433330-30433349 None:intergenic 30.0%
TGATAGAAGGAAGTAACATT+TGG - chr1_3:30433356-30433375 Msa0114060:intron 30.0%
TGATGTAGGTATTTCATTTG+TGG - chr1_3:30433626-30433645 Msa0114060:intron 30.0%
AACCAAAATACAAACTATGC+CGG + chr1_3:30433792-30433811 None:intergenic 30.0%
CTACCATACTATCAACATTT+GGG + chr1_3:30433950-30433969 None:intergenic 30.0%
ACTACCATACTATCAACATT+TGG + chr1_3:30433951-30433970 None:intergenic 30.0%
CACTATGTAGATATAGTATC+AGG - chr1_3:30434139-30434158 Msa0114060:intron 30.0%
! ACCATTACTAGTATTTGTTG+AGG - chr1_3:30434173-30434192 Msa0114060:intron 30.0%
AGCACTTTCTAATAAAACCA+TGG + chr1_3:30434204-30434223 None:intergenic 30.0%
TGAATCCATTTCCTAACTTA+AGG - chr1_3:30434322-30434341 Msa0114060:CDS 30.0%
GAATTCCTTAAGTTAGGAAA+TGG + chr1_3:30434330-30434349 None:intergenic 30.0%
CAAACAGAATTCCTTAAGTT+AGG + chr1_3:30434336-30434355 None:intergenic 30.0%
CTAACTTAAGGAATTCTGTT+TGG - chr1_3:30434334-30434353 Msa0114060:CDS 30.0%
!! TAGCTTAACTATTTCTGTGA+GGG - chr1_3:30434391-30434410 Msa0114060:CDS 30.0%
AGTTTGTATCTTTCCTGTTT+CGG - chr1_3:30434544-30434563 Msa0114060:intron 30.0%
!!! TTTGCTCATTTTTTTGCAGT+TGG - chr1_3:30434603-30434622 Msa0114060:intron 30.0%
!! GGTAAAACAAACTTTTTCCA+TGG - chr1_3:30434639-30434658 Msa0114060:intron 30.0%
ACTTCACAAAGAGTAAAATC+TGG + chr1_3:30434708-30434727 None:intergenic 30.0%
CTAGATACAAAACAAAAGGA+GGG + chr1_3:30434773-30434792 None:intergenic 30.0%
ATGGCTAGATACAAAACAAA+AGG + chr1_3:30434777-30434796 None:intergenic 30.0%
ATCACTTAACACAAAACGAA+TGG + chr1_3:30434796-30434815 None:intergenic 30.0%
! TATTTTTCTCTCTACAGGAA+GGG - chr1_3:30434954-30434973 Msa0114060:intron 30.0%
GAAAACAAAACATGCATAAG+TGG + chr1_3:30435146-30435165 None:intergenic 30.0%
!!! ATGCTATTTTCTTGTCTTGT+TGG - chr1_3:30435185-30435204 Msa0114060:CDS 30.0%
!!! TGCTATTTTCTTGTCTTGTT+GGG - chr1_3:30435186-30435205 Msa0114060:CDS 30.0%
! AGACCAATACTCTAATTTTC+TGG - chr1_3:30435213-30435232 Msa0114060:CDS 30.0%
TTAAAAAAGTCATGAGTCTG+TGG - chr1_3:30435313-30435332 Msa0114060:intron 30.0%
! TATTTGAGGTGTTCTATGAA+AGG + chr1_3:30435406-30435425 None:intergenic 30.0%
TGTTGAGCTATATTTCAACT+TGG - chr1_3:30435447-30435466 Msa0114060:intron 30.0%
AAGAGTTGTTTAAAAAGGCA+GGG + chr1_3:30435474-30435493 None:intergenic 30.0%
AAAGAGTTGTTTAAAAAGGC+AGG + chr1_3:30435475-30435494 None:intergenic 30.0%
!!! GACGATTCTATTTTGGTATT+GGG + chr1_3:30435658-30435677 None:intergenic 30.0%
AAAAAACATAGAAGAGTTGG+TGG + chr1_3:30435770-30435789 None:intergenic 30.0%
GAGAAAAAACATAGAAGAGT+TGG + chr1_3:30435773-30435792 None:intergenic 30.0%
!! TTTGAGGATATTTTAAAGGG+CGG + chr1_3:30435821-30435840 None:intergenic 30.0%
!!! GGCTTTGAGGATATTTTAAA+GGG + chr1_3:30435824-30435843 None:intergenic 30.0%
AATGAAACTCCTATGATCAA+AGG - chr1_3:30435869-30435888 Msa0114060:intron 30.0%
AATCAGAAAGAAAGGAGAAT+AGG + chr1_3:30435979-30435998 None:intergenic 30.0%
ATTCTCCTTTCTTTCTGATT+TGG - chr1_3:30435979-30435998 Msa0114060:intron 30.0%
!!! ATTAGTCACCTTTTTTTTCC+TGG - chr1_3:30436109-30436128 Msa0114060:intron 30.0%
TTAATATAGTAACGATAGCC+AGG + chr1_3:30436130-30436149 None:intergenic 30.0%
! AATCTCTACCTTTTAAATGG+TGG - chr1_3:30436148-30436167 Msa0114060:intron 30.0%
AAAACCCAAAGTGTAGAAAT+CGG + chr1_3:30436203-30436222 None:intergenic 30.0%
TTTCAGACAACTTGGATAAA+AGG + chr1_3:30436573-30436592 None:intergenic 30.0%
!! GATAGATTTTTCAGACAACT+TGG + chr1_3:30436581-30436600 None:intergenic 30.0%
TGTCTGAAAAATCTATCGAT+TGG - chr1_3:30436584-30436603 Msa0114060:intron 30.0%
AAGTAAAATGCAAGCTGTTT+GGG + chr1_3:30436638-30436657 None:intergenic 30.0%
AAAGTAAAATGCAAGCTGTT+TGG + chr1_3:30436639-30436658 None:intergenic 30.0%
TTTGCACATGTACTTTATCT+TGG - chr1_3:30436701-30436720 Msa0114060:intron 30.0%
TTGCACATGTACTTTATCTT+GGG - chr1_3:30436702-30436721 Msa0114060:intron 30.0%
! TTATCTTGGGCATCTATTTT+TGG - chr1_3:30436715-30436734 Msa0114060:intron 30.0%
TGTGCTTAAAATTGATGTGT+TGG - chr1_3:30436859-30436878 Msa0114060:intron 30.0%
GTGCTTAAAATTGATGTGTT+GGG - chr1_3:30436860-30436879 Msa0114060:intron 30.0%
AAGGATGAATACTTTCTAGA+TGG - chr1_3:30436972-30436991 Msa0114060:intron 30.0%
! ACATTTTATCTTATGCCCTT+TGG - chr1_3:30437062-30437081 Msa0114060:intron 30.0%
! ATGAATTTACTAGAAAGTGC+TGG - chr1_3:30437153-30437172 Msa0114060:CDS 30.0%
!! TGAATTTACTAGAAAGTGCT+GGG - chr1_3:30437154-30437173 Msa0114060:CDS 30.0%
TTGGATTTACTGAAGGAAAT+AGG - chr1_3:30437358-30437377 Msa0114060:intron 30.0%
TTGAAAATAATGCAGGATAC+AGG - chr1_3:30437418-30437437 Msa0114060:intron 30.0%
! TGAACTTCTTTCTTGATGAT+TGG - chr1_3:30437780-30437799 Msa0114060:CDS 30.0%
ACAACATATCATCACCTAAA+TGG + chr1_3:30437820-30437839 None:intergenic 30.0%
ACAAAAACAAGGTCTTCATA+AGG + chr1_3:30437912-30437931 None:intergenic 30.0%
ATTAAAACCTTCCCATTTGT+TGG + chr1_3:30438056-30438075 None:intergenic 30.0%
!! GGTTTTAATGATAACGATTC+TGG - chr1_3:30438067-30438086 Msa0114060:intron 30.0%
! CATTTTATCCCTGTATGTAT+GGG + chr1_3:30438153-30438172 None:intergenic 30.0%
!! AGTTATTTTATCATGCAGCT+AGG + chr1_3:30438221-30438240 None:intergenic 30.0%
!! TTGGCTTTTACTTTTACCAA+AGG + chr1_3:30438364-30438383 None:intergenic 30.0%
! GCCAAACAATGTTATTGATT+AGG - chr1_3:30438379-30438398 Msa0114060:intron 30.0%
CCCTAATCAATAACATTGTT+TGG + chr1_3:30438383-30438402 None:intergenic 30.0%
! ACAATGTTATTGATTAGGGA+TGG - chr1_3:30438384-30438403 Msa0114060:intron 30.0%
AACTCAAGTGTTATAAATGC+CGG + chr1_3:30438511-30438530 None:intergenic 30.0%
TTTAGAGATGTCAACTAAGT+TGG + chr1_3:30438598-30438617 None:intergenic 30.0%
AGAGACAATTACAATAGAGA+GGG + chr1_3:30438750-30438769 None:intergenic 30.0%
! AGCTTGTTCTATCTAAAACA+AGG + chr1_3:30439032-30439051 None:intergenic 30.0%
!! TGTTTTAGATAGAACAAGCT+CGG - chr1_3:30439032-30439051 Msa0114060:intron 30.0%
AACCTCATTATACTTCTTTG+CGG + chr1_3:30439077-30439096 None:intergenic 30.0%
ACAAGAGAAATCCAAAGATT+TGG - chr1_3:30439105-30439124 Msa0114060:intron 30.0%
TTGATGTCAAAGACTTACAA+GGG - chr1_3:30439236-30439255 Msa0114060:CDS 30.0%
!!! TGAGTTCTAGTTCTTTTGAA+TGG - chr1_3:30439314-30439333 Msa0114060:intron 30.0%
TGATTTATCTTTGACCTACA+TGG - chr1_3:30439351-30439370 Msa0114060:intron 30.0%
GAAAGAAAAAGACATTACCA+AGG - chr1_3:30439478-30439497 Msa0114060:CDS 30.0%
AAGAAAAAGACATTACCAAG+GGG - chr1_3:30439480-30439499 Msa0114060:CDS 30.0%
GCAGAAAAATGTATATGCAA+TGG + chr1_3:30440064-30440083 None:intergenic 30.0%
! TTGAATTTAGAGTGACTGAT+AGG + chr1_3:30440152-30440171 None:intergenic 30.0%
AGACAACAACAATATTATGC+GGG + chr1_3:30440183-30440202 None:intergenic 30.0%
CAGACAACAACAATATTATG+CGG + chr1_3:30440184-30440203 None:intergenic 30.0%
!! GAAAAACTGTCATATTTTGG+TGG + chr1_3:30440219-30440238 None:intergenic 30.0%
! AATATGACAGTTTTTCCTAG+AGG - chr1_3:30440223-30440242 Msa0114060:intron 30.0%
CTTGAGAAGAGTTTATAAAG+AGG - chr1_3:30440430-30440449 Msa0114060:CDS 30.0%
TGATACCATGTTGAAATTTG+GGG + chr1_3:30440501-30440520 None:intergenic 30.0%
CTGATACCATGTTGAAATTT+GGG + chr1_3:30440502-30440521 None:intergenic 30.0%
TCTGATACCATGTTGAAATT+TGG + chr1_3:30440503-30440522 None:intergenic 30.0%
CATTGAAACATATATTCCCA+GGG + chr1_3:30440948-30440967 None:intergenic 30.0%
TCATTGAAACATATATTCCC+AGG + chr1_3:30440949-30440968 None:intergenic 30.0%
ACTTCAAAAACAAAAGTCAG+CGG + chr1_3:30441040-30441059 None:intergenic 30.0%
GAAAAGCCTCTTATAAGAAA+TGG + chr1_3:30441108-30441127 None:intergenic 30.0%
!! AACAAATTTTAAGTGTCTGG+TGG + chr1_3:30441140-30441159 None:intergenic 30.0%
TAATCTCTAACTCTGCTAAA+TGG - chr1_3:30441205-30441224 Msa0114060:intron 30.0%
AAGATTTATGAACCTAACAC+GGG + chr1_3:30441305-30441324 None:intergenic 30.0%
TTAATACCACAAGTATCACA+TGG + chr1_3:30441341-30441360 None:intergenic 30.0%
!! TTGTTGACTGAGTATTTTAC+GGG - chr1_3:30441378-30441397 Msa0114060:intron 30.0%
!! CAAACTTTTTCTTATCCTGA+AGG + chr1_3:30441581-30441600 None:intergenic 30.0%
! AGTCAATGAGATACTTGTTA+TGG - chr1_3:30441647-30441666 Msa0114060:intron 30.0%
ATCATCATCATAGATCCTTA+TGG - chr1_3:30441696-30441715 Msa0114060:intron 30.0%
AAGAAAGATCTTGAGATTGA+TGG - chr1_3:30441868-30441887 Msa0114060:intron 30.0%
ACTGGACAGATAATAATAGT+GGG + chr1_3:30442055-30442074 None:intergenic 30.0%
AACTGGACAGATAATAATAG+TGG + chr1_3:30442056-30442075 None:intergenic 30.0%
CTATTATTATCTGTCCAGTT+TGG - chr1_3:30442056-30442075 Msa0114060:intron 30.0%
ATTATTATCTGTCCAGTTTG+GGG - chr1_3:30442058-30442077 Msa0114060:intron 30.0%
TATCCCTTCTTTGAATAAGT+AGG - chr1_3:30442289-30442308 Msa0114060:intron 30.0%
AAGCCTACTTATTCAAAGAA+GGG + chr1_3:30442295-30442314 None:intergenic 30.0%
!! CATAGGGTGTATTTTTGTTT+TGG - chr1_3:30442331-30442350 Msa0114060:intron 30.0%
TTTCAACAGCTTATTTCATG+TGG - chr1_3:30442493-30442512 Msa0114060:intron 30.0%
ACCTTAATCAACAAAAAGGT+GGG - chr1_3:30442555-30442574 Msa0114060:intron 30.0%
! CTTTAAAAGAGGTATGACAT+CGG + chr1_3:30442642-30442661 None:intergenic 30.0%
! CCAAATTCTAGGAGTTATAA+TGG + chr1_3:30442814-30442833 None:intergenic 30.0%
CCATTATAACTCCTAGAATT+TGG - chr1_3:30442811-30442830 Msa0114060:intron 30.0%
ATGAAATTATTTGGTAGAGG+AGG - chr1_3:30443203-30443222 Msa0114060:intron 30.0%
! TTTTGTGTTTAGGTGATATG+AGG - chr1_3:30443230-30443249 Msa0114060:intron 30.0%
TTTAGATAGCAGGTTATGTT+AGG - chr1_3:30443294-30443313 Msa0114060:intron 30.0%
TAAGCTCACAACAATATAGA+AGG + chr1_3:30443409-30443428 None:intergenic 30.0%
CCAAAATAATTAACCAGTGA+GGG + chr1_3:30443589-30443608 None:intergenic 30.0%
TCCAAAATAATTAACCAGTG+AGG + chr1_3:30443590-30443609 None:intergenic 30.0%
ACTGATACCATCTTAGAATT+TGG - chr1_3:30443648-30443667 Msa0114060:intron 30.0%
CTGATACCATCTTAGAATTT+GGG - chr1_3:30443649-30443668 Msa0114060:intron 30.0%
!! ACCTTAAAAACGGTTTTGTA+GGG + chr1_3:30443690-30443709 None:intergenic 30.0%
! ACAATATGTTTCTAAGTTCG+AGG + chr1_3:30443726-30443745 None:intergenic 30.0%
GAACTTAGAAACATATTGTC+AGG - chr1_3:30443727-30443746 Msa0114060:CDS 30.0%
TTAGGACAATGTGACATAAA+TGG - chr1_3:30443822-30443841 Msa0114060:CDS 30.0%
!!! TGGTTTTATAAGGAAGAGTT+AGG + chr1_3:30443991-30444010 None:intergenic 30.0%
AAAAGAGATAAAGCATAGAG+AGG + chr1_3:30444231-30444250 None:intergenic 30.0%
! GCTTTATCTCTTTTCAATGT+CGG - chr1_3:30444237-30444256 Msa0114060:intron 30.0%
!! GATTCAGAAAGCATATTTTG+AGG - chr1_3:30444375-30444394 Msa0114060:intron 30.0%
GAAACGCTCTACATTAATAA+TGG + chr1_3:30444424-30444443 None:intergenic 30.0%
AAAAACCTGAAGACTACTTT+AGG + chr1_3:30444470-30444489 None:intergenic 30.0%
AATGCAACTTTATAACGAAG+AGG + chr1_3:30444562-30444581 None:intergenic 30.0%
TCTTCGTTATAAAGTTGCAT+TGG - chr1_3:30444561-30444580 Msa0114060:intron 30.0%
CTAAGCAAACAAAGTAAATC+TGG - chr1_3:30445029-30445048 Msa0114060:intron 30.0%
GAATGAGAAGAAAAACCATT+TGG - chr1_3:30445095-30445114 Msa0114060:intron 30.0%
AGAAAGTAAATATGACTGCT+GGG + chr1_3:30445130-30445149 None:intergenic 30.0%
!!! TTTCTGCCTTTGATTTTTTC+TGG - chr1_3:30445145-30445164 Msa0114060:intron 30.0%
TACAAACAGTGATTTCGTTA+TGG - chr1_3:30445248-30445267 Msa0114060:intron 30.0%
! GTTTGACCATTATTTTCTTC+TGG - chr1_3:30445270-30445289 Msa0114060:intron 30.0%
! TCACAAAACTAATGGATATG+TGG + chr1_3:30445627-30445646 None:intergenic 30.0%
!!! ATAGGGGAAAATGGTTTTTT+TGG + chr1_3:30445680-30445699 None:intergenic 30.0%
! AAAAAAACCATTTTCCCCTA+TGG - chr1_3:30445679-30445698 Msa0114060:intron 30.0%
TCAGTGAAAACAAAACCATA+GGG + chr1_3:30445697-30445716 None:intergenic 30.0%
TTCAGTGAAAACAAAACCAT+AGG + chr1_3:30445698-30445717 None:intergenic 30.0%
!! GCAAGTGCTTTAGAAAATAA+TGG + chr1_3:30445853-30445872 None:intergenic 30.0%
ACAAGCAACTATCAATAGAA+AGG + chr1_3:30445930-30445949 None:intergenic 30.0%
AATCAGATTGAACAGCTTAA+GGG - chr1_3:30446024-30446043 Msa0114060:CDS 30.0%
!! CTTTAAGGTCTTTGATTTCA+GGG + chr1_3:30446137-30446156 None:intergenic 30.0%
!! TCTTTAAGGTCTTTGATTTC+AGG + chr1_3:30446138-30446157 None:intergenic 30.0%
! AAATTTTGCAGATTGAAGCA+CGG - chr1_3:30446260-30446279 Msa0114060:intron 30.0%
CTAATCTAACCACTAATCTT+AGG - chr1_3:30446299-30446318 Msa0114060:intron 30.0%
! TTTTCTTCTCCTAAGATTAG+TGG + chr1_3:30446311-30446330 None:intergenic 30.0%
! ACTTAATGATGCAAAAGTGT+TGG - chr1_3:30446405-30446424 Msa0114060:intron 30.0%
GCCAAATAACTTCATCATTA+AGG + chr1_3:30446656-30446675 None:intergenic 30.0%
TAAAGAATTAGAGCAATTGC+TGG - chr1_3:30446722-30446741 Msa0114060:intron 30.0%
AAAGAATTAGAGCAATTGCT+GGG - chr1_3:30446723-30446742 Msa0114060:intron 30.0%
! CTTGGTATACTTTTCTTCTT+TGG + chr1_3:30446769-30446788 None:intergenic 30.0%
ACCAAGAAAATAAAGGAACT+TGG - chr1_3:30446783-30446802 Msa0114060:intron 30.0%
ACTCAAGCGTCATTTAAATA+TGG - chr1_3:30447120-30447139 Msa0114060:intron 30.0%
!! TCTACTTGTTATCCATCTAT+TGG - chr1_3:30447204-30447223 Msa0114060:intron 30.0%
ATCAAGAGATATAGTTGTTG+TGG - chr1_3:30447314-30447333 Msa0114060:intron 30.0%
GATATAGTTGTTGTGGTTTA+TGG - chr1_3:30447321-30447340 Msa0114060:intron 30.0%
!! GACTCTTTTCCTTTTTTCAT+TGG - chr1_3:30447400-30447419 Msa0114060:intron 30.0%
TTATGAAGAACTTCCTATAC+TGG + chr1_3:30447617-30447636 None:intergenic 30.0%
TTCTGCACTTTATCATCTAA+AGG - chr1_3:30447697-30447716 Msa0114060:CDS 30.0%
! CTAATAATGTGATGGAAAGT+GGG + chr1_3:30448409-30448428 None:intergenic 30.0%
! TCTAATAATGTGATGGAAAG+TGG + chr1_3:30448410-30448429 None:intergenic 30.0%
TTGAGCATCTAATAATGTGA+TGG + chr1_3:30448417-30448436 None:intergenic 30.0%
CATAAAGGAACAAAAGATGA+TGG + chr1_3:30448637-30448656 None:intergenic 30.0%
AATAGCCACATTCTTATCAT+TGG - chr1_3:30448845-30448864 Msa0114060:intron 30.0%
!! CTATAAGTTGGTTGGAAAAT+TGG + chr1_3:30449022-30449041 None:intergenic 30.0%
TATTGGGAGATACTATAAGT+TGG + chr1_3:30449034-30449053 None:intergenic 30.0%
!!! GTTTTTTATTTGGGATCCAT+AGG - chr1_3:30449076-30449095 Msa0114060:intron 30.0%
AGTTGTATTCCTCCAATAAA+AGG + chr1_3:30449225-30449244 None:intergenic 30.0%
!! TTTTATTTCCTCTCTTAGGA+TGG - chr1_3:30449548-30449567 Msa0114060:intron 30.0%
!!! TAGTTCTTTTGTTTTCTGGT+TGG - chr1_3:30449785-30449804 Msa0114060:intron 30.0%
GATATCATTAAACAAAGACG+TGG - chr1_3:30449866-30449885 Msa0114060:intron 30.0%
! TGGGTTTTACAATCAGTTAA+GGG + chr1_3:30449904-30449923 None:intergenic 30.0%
TATGGCAAAGATAAGTGTAA+GGG + chr1_3:30450088-30450107 None:intergenic 30.0%
CAATGCAACATTATATGAAG+TGG + chr1_3:30450282-30450301 None:intergenic 30.0%
AATGTTGCATTGCATATTAG+AGG - chr1_3:30450290-30450309 Msa0114060:CDS 30.0%
AATTTAGTTAGCAATAGCTG+AGG + chr1_3:30450426-30450445 None:intergenic 30.0%
ACAAAATAACTCATGCTATG+AGG + chr1_3:30450449-30450468 None:intergenic 30.0%
TTGCATTTAGTACTTCTGTT+AGG - chr1_3:30450468-30450487 Msa0114060:CDS 30.0%
TGGAGAAATACTTACAGAAA+TGG - chr1_3:30450600-30450619 Msa0114060:intron 30.0%
ATGGTATGTGACATGATATA+TGG - chr1_3:30450619-30450638 Msa0114060:intron 30.0%
TATGTGACATGATATATGGT+AGG - chr1_3:30450623-30450642 Msa0114060:intron 30.0%
ATGTGACATGATATATGGTA+GGG - chr1_3:30450624-30450643 Msa0114060:intron 30.0%
!! AAATGTTTTTACCACTGACA+TGG + chr1_3:30450668-30450687 None:intergenic 30.0%
! TTTTATACTCTCGTTCCTTT+GGG - chr1_3:30450776-30450795 Msa0114060:intron 30.0%
TATCATGTCTATGAAAGTCA+AGG + chr1_3:30450805-30450824 None:intergenic 30.0%
TGACTTTCATAGACATGATA+CGG - chr1_3:30450805-30450824 Msa0114060:intron 30.0%
TTCATCACAGTCATAAACAT+CGG + chr1_3:30451042-30451061 None:intergenic 30.0%
TTATGCCATTGATGAATGTT+AGG - chr1_3:30451172-30451191 Msa0114060:intron 30.0%
TATGCCATTGATGAATGTTA+GGG - chr1_3:30451173-30451192 Msa0114060:intron 30.0%
! TTTTCCCTAACATTCATCAA+TGG + chr1_3:30451180-30451199 None:intergenic 30.0%
GTATCTCTAAACTACTAACA+AGG - chr1_3:30451259-30451278 Msa0114060:intron 30.0%
ATTATCATGGAGATGTTATG+CGG - chr1_3:30451782-30451801 Msa0114060:CDS 30.0%
!! TTGCCCTTTTTCTGAAAAAA+CGG - chr1_3:30451847-30451866 Msa0114060:intron 30.0%
!!! CAATCCGTTTTTTCAGAAAA+AGG + chr1_3:30451854-30451873 None:intergenic 30.0%
TTTATCATAGCCATCCAAAA+GGG + chr1_3:30451972-30451991 None:intergenic 30.0%
ATTTATCATAGCCATCCAAA+AGG + chr1_3:30451973-30451992 None:intergenic 30.0%
AAATTAAAGTTGTGGAATCG+TGG - chr1_3:30452028-30452047 Msa0114060:intron 30.0%
TGCATTAAAGATTCATATGG+AGG - chr1_3:30452105-30452124 Msa0114060:intron 30.0%
TATTAGGTGTACTATTTGCA+TGG - chr1_3:30452356-30452375 Msa0114060:intron 30.0%
AATTACTAAGGCCTATGTTA+TGG + chr1_3:30452469-30452488 None:intergenic 30.0%
CCTCTTGAACAAAACTTATA+AGG + chr1_3:30452746-30452765 None:intergenic 30.0%
!!! CCTTATAAGTTTTGTTCAAG+AGG - chr1_3:30452743-30452762 Msa0114060:five_prime_UTR 30.0%
! TAGCCAAGTTGAATGTTTGA+AGG + chr1_3:30432527-30432546 None:intergenic 35.0%
AAGAAGAATTGAAAGCGACT+AGG + chr1_3:30432614-30432633 None:intergenic 35.0%
! GGAGATTGATTTAGGGTTTA+GGG + chr1_3:30432720-30432739 None:intergenic 35.0%
! TCATCTCGGAGATTGATTTA+GGG + chr1_3:30432727-30432746 None:intergenic 35.0%
! ATCATCTCGGAGATTGATTT+AGG + chr1_3:30432728-30432747 None:intergenic 35.0%
! TTAGCATCGAAATCAAGTAG+CGG + chr1_3:30432771-30432790 None:intergenic 35.0%
TGAGTTCACTATTGCTTTGT+TGG - chr1_3:30432892-30432911 Msa0114060:three_prime_UTR 35.0%
CATCAGTTATTCAACAAACC+TGG - chr1_3:30433309-30433328 Msa0114060:intron 35.0%
! GAGTTTGTTCCTTGCTTAAA+TGG - chr1_3:30433442-30433461 Msa0114060:intron 35.0%
GATACAAGTCCATTTAAGCA+AGG + chr1_3:30433454-30433473 None:intergenic 35.0%
TTACCAACACAGTTAACTCT+AGG + chr1_3:30433544-30433563 None:intergenic 35.0%
!! TCCTTTGAAATGCATGATGT+AGG - chr1_3:30433612-30433631 Msa0114060:intron 35.0%
ACCTACATCATGCATTTCAA+AGG + chr1_3:30433616-30433635 None:intergenic 35.0%
TCATTTGTGGCATGTCATAA+TGG - chr1_3:30433639-30433658 Msa0114060:intron 35.0%
!! ATGCCCAAATGTTGATAGTA+TGG - chr1_3:30433944-30433963 Msa0114060:intron 35.0%
TAGTCTCAAGAGTAACAAGA+TGG - chr1_3:30433967-30433986 Msa0114060:intron 35.0%
!! CTAAGATAGCTGGTTGTTTT+AGG + chr1_3:30434035-30434054 None:intergenic 35.0%
! ATGGAAATCAGCAGATTTTG+CGG + chr1_3:30434080-30434099 None:intergenic 35.0%
AGAAATATGGCAACGCTTAA+TGG + chr1_3:30434099-30434118 None:intergenic 35.0%
ATATAGTATCAGGGCAATGT+AGG - chr1_3:30434149-30434168 Msa0114060:intron 35.0%
GCCTCAACAAATACTAGTAA+TGG + chr1_3:30434177-30434196 None:intergenic 35.0%
!! CTAGCTTAACTATTTCTGTG+AGG - chr1_3:30434390-30434409 Msa0114060:CDS 35.0%
!! AGCTTAACTATTTCTGTGAG+GGG - chr1_3:30434392-30434411 Msa0114060:CDS 35.0%
! TAGCGAAAAAGAGTCCTTTT+TGG - chr1_3:30434418-30434437 Msa0114060:CDS 35.0%
!!! TTTTTTGCAGTTGGTGCTAA+TGG - chr1_3:30434612-30434631 Msa0114060:intron 35.0%
! AAATGGCGATTTTCTTACCA+TGG + chr1_3:30434659-30434678 None:intergenic 35.0%
TGGTCAAGTTATAAGTACAG+TGG + chr1_3:30434688-30434707 None:intergenic 35.0%
GCTAGATACAAAACAAAAGG+AGG + chr1_3:30434774-30434793 None:intergenic 35.0%
AGTATGAATTGTGCCATACA+TGG + chr1_3:30434860-30434879 None:intergenic 35.0%
! GTATTTTTCTCTCTACAGGA+AGG - chr1_3:30434953-30434972 Msa0114060:intron 35.0%
! ATTTTTCTCTCTACAGGAAG+GGG - chr1_3:30434955-30434974 Msa0114060:intron 35.0%
TAATTCAGACAATCGTATCC+CGG - chr1_3:30435021-30435040 Msa0114060:intron 35.0%
!!! TGCATGTTTTGTTTTCTGCT+TGG - chr1_3:30435150-30435169 Msa0114060:CDS 35.0%
!!! AGGTTAGTATGGGTTGATTT+TGG + chr1_3:30435361-30435380 None:intergenic 35.0%
! GAACTTTAGAGGTGTATTTG+AGG + chr1_3:30435420-30435439 None:intergenic 35.0%
! ATGAGTTTATGAGGCTGTTT+TGG + chr1_3:30435498-30435517 None:intergenic 35.0%
! TTTTCATTGAGGAAGTAGCA+AGG + chr1_3:30435561-30435580 None:intergenic 35.0%
CATCCATATACTTCTATGGT+TGG + chr1_3:30435590-30435609 None:intergenic 35.0%
GAGTCATCCATATACTTCTA+TGG + chr1_3:30435594-30435613 None:intergenic 35.0%
TGCAATGAAATGAACAACCT+TGG - chr1_3:30435616-30435635 Msa0114060:intron 35.0%
TGAAATGAACAACCTTGGAT+TGG - chr1_3:30435621-30435640 Msa0114060:intron 35.0%
!!! CTATTTTGGTATTGGGTAAC+AGG + chr1_3:30435651-30435670 None:intergenic 35.0%
!!! CGACGATTCTATTTTGGTAT+TGG + chr1_3:30435659-30435678 None:intergenic 35.0%
ATTTGCCAACAAAACGTATC+AGG + chr1_3:30435736-30435755 None:intergenic 35.0%
! TTTTTCTCATTCCCTTTCAG+TGG - chr1_3:30435785-30435804 Msa0114060:intron 35.0%
!!! GGGCTTTGAGGATATTTTAA+AGG + chr1_3:30435825-30435844 None:intergenic 35.0%
GTGTACCAAATCAGAAAGAA+AGG + chr1_3:30435987-30436006 None:intergenic 35.0%
ATTTGGTACACATACTTGAC+TGG - chr1_3:30435996-30436015 Msa0114060:intron 35.0%
AACGATAGCCAGGAAAAAAA+AGG + chr1_3:30436120-30436139 None:intergenic 35.0%
CCAATCAACCACCATTTAAA+AGG + chr1_3:30436159-30436178 None:intergenic 35.0%
! CCTTTTAAATGGTGGTTGAT+TGG - chr1_3:30436156-30436175 Msa0114060:intron 35.0%
TAGAAATCGGTGCATAAGAA+CGG + chr1_3:30436190-30436209 None:intergenic 35.0%
! AAAATCTATCGATTGGTGCT+TGG - chr1_3:30436591-30436610 Msa0114060:intron 35.0%
TGTGCAAATATCGCAATAAG+TGG + chr1_3:30436689-30436708 None:intergenic 35.0%
!! TTTTTGGAGGTAGTCTTGAT+TGG - chr1_3:30436731-30436750 Msa0114060:intron 35.0%
!! TTTTGGAGGTAGTCTTGATT+GGG - chr1_3:30436732-30436751 Msa0114060:intron 35.0%
! ATTTTTCCTATTTGTGTCGG+AGG - chr1_3:30436900-30436919 Msa0114060:intron 35.0%
CCTTGTTGCACAACATAATA+TGG + chr1_3:30437195-30437214 None:intergenic 35.0%
CCATATTATGTTGTGCAACA+AGG - chr1_3:30437192-30437211 Msa0114060:CDS 35.0%
TTATGTTGTGCAACAAGGAA+AGG - chr1_3:30437197-30437216 Msa0114060:CDS 35.0%
GATTTACTGAAGGAAATAGG+TGG - chr1_3:30437361-30437380 Msa0114060:intron 35.0%
! CATGTATTTTACTGTGAGAC+AGG - chr1_3:30437514-30437533 Msa0114060:intron 35.0%
CGTCTAAATACTGTACAACT+TGG + chr1_3:30437561-30437580 None:intergenic 35.0%
TTGTACAGTATTTAGACGAG+AGG - chr1_3:30437563-30437582 Msa0114060:intron 35.0%
GCTAAATATGGCATATTCCA+AGG + chr1_3:30437656-30437675 None:intergenic 35.0%
AAATCAATGCTGAGATCAGA+TGG - chr1_3:30437867-30437886 Msa0114060:intron 35.0%
AAAGAGATTGGACCAACAAA+TGG - chr1_3:30438041-30438060 Msa0114060:intron 35.0%
AAGAGATTGGACCAACAAAT+GGG - chr1_3:30438042-30438061 Msa0114060:intron 35.0%
! GCATTTTATCCCTGTATGTA+TGG + chr1_3:30438154-30438173 None:intergenic 35.0%
TATTAGACAGATAGAATGGG+AGG + chr1_3:30438187-30438206 None:intergenic 35.0%
GTGACAGTAATGTGTATGTA+CGG + chr1_3:30438245-30438264 None:intergenic 35.0%
CTTTGGACATAAACTTTCCA+AGG - chr1_3:30438280-30438299 Msa0114060:intron 35.0%
! ATGTTATTGATTAGGGATGG+TGG - chr1_3:30438387-30438406 Msa0114060:intron 35.0%
ATCAGGGTTGTTAAGAATTC+CGG - chr1_3:30438489-30438508 Msa0114060:CDS 35.0%
AGAAGATTTGGGTATGAATG+AGG + chr1_3:30438687-30438706 None:intergenic 35.0%
GACTAAAGAGCAGAAGATTT+GGG + chr1_3:30438698-30438717 None:intergenic 35.0%
AGACTAAAGAGCAGAAGATT+TGG + chr1_3:30438699-30438718 None:intergenic 35.0%
GAGAGACAATTACAATAGAG+AGG + chr1_3:30438751-30438770 None:intergenic 35.0%
TAAAAGGAGTCAAGGATGTT+GGG + chr1_3:30438807-30438826 None:intergenic 35.0%
ATAAAAGGAGTCAAGGATGT+TGG + chr1_3:30438808-30438827 None:intergenic 35.0%
TTCACAAGTAGAGGGATAAA+AGG + chr1_3:30438823-30438842 None:intergenic 35.0%
ATTGAATTTCTGATGCCTGA+AGG - chr1_3:30438993-30439012 Msa0114060:CDS 35.0%
! ATCCGCAAAGAAGTATAATG+AGG - chr1_3:30439072-30439091 Msa0114060:intron 35.0%
CTTGATGTCAAAGACTTACA+AGG - chr1_3:30439235-30439254 Msa0114060:CDS 35.0%
! TCTTTGACCTACATGGTTTT+AGG - chr1_3:30439358-30439377 Msa0114060:intron 35.0%
GAATAAAATACAAGGCTCGA+TGG - chr1_3:30439412-30439431 Msa0114060:intron 35.0%
ATATAATGCATGCACTACGA+GGG + chr1_3:30439562-30439581 None:intergenic 35.0%
TATATAATGCATGCACTACG+AGG + chr1_3:30439563-30439582 None:intergenic 35.0%
GCTTTCATCAAACATAACAC+AGG - chr1_3:30439852-30439871 Msa0114060:intron 35.0%
ATCAAACATAACACAGGCAA+GGG - chr1_3:30439858-30439877 Msa0114060:intron 35.0%
GGCACAAGTATTCTGAATTA+TGG - chr1_3:30439891-30439910 Msa0114060:intron 35.0%
!!! ACTGTTTTTTCCTTGACACA+TGG - chr1_3:30439921-30439940 Msa0114060:intron 35.0%
ACTGATAATTCCATGTGTCA+AGG + chr1_3:30439934-30439953 None:intergenic 35.0%
AGTCACTCTAAATTCAATCG+AGG - chr1_3:30440155-30440174 Msa0114060:intron 35.0%
GAGTACTATCTATCTGATGT+GGG + chr1_3:30440411-30440430 None:intergenic 35.0%
! AGAGTACTATCTATCTGATG+TGG + chr1_3:30440412-30440431 None:intergenic 35.0%
GAGAAGAGTTTATAAAGAGG+AGG - chr1_3:30440433-30440452 Msa0114060:CDS 35.0%
CTAACTCATCCTTACAAAAC+CGG + chr1_3:30440477-30440496 None:intergenic 35.0%
! TCCAATGATAGATCTAGGAT+AGG + chr1_3:30440527-30440546 None:intergenic 35.0%
GGAAATCCAATGATAGATCT+AGG + chr1_3:30440532-30440551 None:intergenic 35.0%
CTCGAGAAGAGTTTATAAAG+AGG - chr1_3:30440745-30440764 Msa0114060:intron 35.0%
GAGAAGAGTTTATAAAGAGG+AGG - chr1_3:30440433-30440452 Msa0114060:CDS 35.0%
CTAACTCATCCTTACAAAAC+CGG + chr1_3:30440477-30440496 None:intergenic 35.0%
AATGAAGCACAATGATGAAG+TGG + chr1_3:30440839-30440858 None:intergenic 35.0%
TACTGCCCATTTCTTATAAG+AGG - chr1_3:30441099-30441118 Msa0114060:intron 35.0%
! ATAAGAGGCTTTTCAACACT+CGG - chr1_3:30441114-30441133 Msa0114060:intron 35.0%
AGCTGATGGAAGAAATTCAA+CGG - chr1_3:30441430-30441449 Msa0114060:intron 35.0%
TAATTGCTATGTCACGTGAA+AGG - chr1_3:30441526-30441545 Msa0114060:intron 35.0%
TTCATTCTCTTTGCTCCATA+AGG + chr1_3:30441714-30441733 None:intergenic 35.0%
!!! TTAGGGTGTTTTTTGAGTGA+CGG - chr1_3:30441933-30441952 Msa0114060:intron 35.0%
! ATGATCTGTCATGATGATGT+TGG - chr1_3:30442081-30442100 Msa0114060:intron 35.0%
TACTCTGTACTATAATGTGC+AGG - chr1_3:30442129-30442148 Msa0114060:intron 35.0%
TGCAAAACTCAGAACATTTC+TGG - chr1_3:30442187-30442206 Msa0114060:intron 35.0%
CAGTTCAGCAACTCAATAAT+TGG + chr1_3:30442223-30442242 None:intergenic 35.0%
GAAGCCTACTTATTCAAAGA+AGG + chr1_3:30442296-30442315 None:intergenic 35.0%
TCACCACATGTTACATTCAT+AGG - chr1_3:30442314-30442333 Msa0114060:intron 35.0%
CACCACATGTTACATTCATA+GGG - chr1_3:30442315-30442334 Msa0114060:intron 35.0%
!!! TTTTGTTTTGGAAATGGGGA+TGG - chr1_3:30442343-30442362 Msa0114060:intron 35.0%
!!! TTTGTTTTGGAAATGGGGAT+GGG - chr1_3:30442344-30442363 Msa0114060:intron 35.0%
TCATCTCTAGTATCTGTTCT+TGG - chr1_3:30442405-30442424 Msa0114060:intron 35.0%
CACCTTAATCAACAAAAAGG+TGG - chr1_3:30442554-30442573 Msa0114060:intron 35.0%
! TAACTCCTAGAATTTGGGTT+TGG - chr1_3:30442817-30442836 Msa0114060:intron 35.0%
TGGCTGTACTCATACAAATT+TGG - chr1_3:30442999-30443018 Msa0114060:intron 35.0%
GGCTGTACTCATACAAATTT+GGG - chr1_3:30443000-30443019 Msa0114060:intron 35.0%
GCTGTACTCATACAAATTTG+GGG - chr1_3:30443001-30443020 Msa0114060:intron 35.0%
CTGTACTCATACAAATTTGG+GGG - chr1_3:30443002-30443021 Msa0114060:intron 35.0%
AATTATTTGGTAGAGGAGGT+CGG - chr1_3:30443207-30443226 Msa0114060:intron 35.0%
! ATATGAGGCTGTGATGTTTT+AGG - chr1_3:30443245-30443264 Msa0114060:intron 35.0%
AACCTGCTATCTAAATTGCA+TGG + chr1_3:30443289-30443308 None:intergenic 35.0%
!! CCCTCACTGGTTAATTATTT+TGG - chr1_3:30443586-30443605 Msa0114060:intron 35.0%
!! ACCCTACAAAACCGTTTTTA+AGG - chr1_3:30443686-30443705 Msa0114060:intron 35.0%
!! CACCTTAAAAACGGTTTTGT+AGG + chr1_3:30443691-30443710 None:intergenic 35.0%
!!! ACAAAACCGTTTTTAAGGTG+AGG - chr1_3:30443691-30443710 Msa0114060:intron 35.0%
TATTGTTAAGAGTCCCACAT+TGG + chr1_3:30443764-30443783 None:intergenic 35.0%
ATGTACAAACCAGCAGTTTA+CGG + chr1_3:30443949-30443968 None:intergenic 35.0%
!! GGTCTTATCTCTTTTCAATG+CGG - chr1_3:30444052-30444071 Msa0114060:intron 35.0%
! GTCTTATCTCTTTTCAATGC+GGG - chr1_3:30444053-30444072 Msa0114060:intron 35.0%
TGCGTGGATAATTCTATCTT+AGG - chr1_3:30444135-30444154 Msa0114060:intron 35.0%
TAGAGAGGACTTATAAAGAG+AGG + chr1_3:30444216-30444235 None:intergenic 35.0%
! TCTCTTTTCAATGTCGGATT+TGG - chr1_3:30444243-30444262 Msa0114060:intron 35.0%
! CTCTTTTCAATGTCGGATTT+GGG - chr1_3:30444244-30444263 Msa0114060:intron 35.0%
CTATACCTAAAGTAGTCTTC+AGG - chr1_3:30444462-30444481 Msa0114060:intron 35.0%
!! AGTAGTCTTCAGGTTTTTCA+AGG - chr1_3:30444472-30444491 Msa0114060:intron 35.0%
!! GTAGTCTTCAGGTTTTTCAA+GGG - chr1_3:30444473-30444492 Msa0114060:intron 35.0%
AACAGTTATCTGCAAGAATC+TGG - chr1_3:30444630-30444649 Msa0114060:intron 35.0%
ATTGTTGTCTGTCTCTATAC+AGG - chr1_3:30444769-30444788 Msa0114060:intron 35.0%
GGTGATCAAGTAAGCAAAAA+AGG - chr1_3:30444790-30444809 Msa0114060:intron 35.0%
AGCAAAAAAGGTAGTATGAC+CGG - chr1_3:30444802-30444821 Msa0114060:intron 35.0%
TCTGTGATCATAAAATCCTC+CGG + chr1_3:30444824-30444843 None:intergenic 35.0%
AGCAAACAAAGTAAATCTGG+AGG - chr1_3:30445032-30445051 Msa0114060:intron 35.0%
CAGAAAGTAAATATGACTGC+TGG + chr1_3:30445131-30445150 None:intergenic 35.0%
TGGTATCTTGGACATATAGA+GGG - chr1_3:30445290-30445309 Msa0114060:intron 35.0%
CACGTCATAAACAAATCAAG+CGG + chr1_3:30445591-30445610 None:intergenic 35.0%
!!! GGAAAATGGTTTTTTTGGCA+AGG + chr1_3:30445675-30445694 None:intergenic 35.0%
AACAAAACCATAGGGGAAAA+TGG + chr1_3:30445689-30445708 None:intergenic 35.0%
CAGTGAAAACAAAACCATAG+GGG + chr1_3:30445696-30445715 None:intergenic 35.0%
!!! TGGTTTTGTTTTCACTGAAC+TGG - chr1_3:30445699-30445718 Msa0114060:intron 35.0%
GAAATTCAAAGACACCTTCT+TGG + chr1_3:30445875-30445894 None:intergenic 35.0%
GAATCAGATTGAACAGCTTA+AGG - chr1_3:30446023-30446042 Msa0114060:CDS 35.0%
CATTGATCATTTAACACCAG+AGG - chr1_3:30446086-30446105 Msa0114060:CDS 35.0%
!!! GACAAAAGCTTTTTTTCCTC+TGG + chr1_3:30446105-30446124 None:intergenic 35.0%
AAGCAACAAGCTTCTCTTTA+AGG + chr1_3:30446152-30446171 None:intergenic 35.0%
! ATCTGATGATGATGAGTCTA+TGG - chr1_3:30446354-30446373 Msa0114060:intron 35.0%
GTTTAATGGTTACGTGTTGT+TGG - chr1_3:30446629-30446648 Msa0114060:intron 35.0%
GGAGTATAATAGAAGACATC+AGG - chr1_3:30446692-30446711 Msa0114060:intron 35.0%
!!! GCCAAGTTCCTTTATTTTCT+TGG + chr1_3:30446787-30446806 None:intergenic 35.0%
!! CAAAAGCATCTGATGTCAAT+GGG + chr1_3:30446809-30446828 None:intergenic 35.0%
!! TCAAAAGCATCTGATGTCAA+TGG + chr1_3:30446810-30446829 None:intergenic 35.0%
TTAAGTAAAAGTAAGCCGCT+AGG + chr1_3:30446846-30446865 None:intergenic 35.0%
! AAAGCTCATCGTTTTCTTCA+CGG - chr1_3:30446947-30446966 Msa0114060:intron 35.0%
GAGAATGAATTGTTGCTACT+GGG + chr1_3:30446996-30447015 None:intergenic 35.0%
TGAGAATGAATTGTTGCTAC+TGG + chr1_3:30446997-30447016 None:intergenic 35.0%
! AGAAGTTTGGAGTATTTGCA+AGG + chr1_3:30447061-30447080 None:intergenic 35.0%
TAAATGACGCTTGAGTAGAA+AGG + chr1_3:30447116-30447135 None:intergenic 35.0%
AGCGTCATTTAAATATGGCA+TGG - chr1_3:30447125-30447144 Msa0114060:intron 35.0%
TAACAAGTAGAGAATGCTCT+TGG + chr1_3:30447195-30447214 None:intergenic 35.0%
CTGTCATGTCCAATGAAAAA+AGG + chr1_3:30447412-30447431 None:intergenic 35.0%
!!! CTTTTTTCATTGGACATGAC+AGG - chr1_3:30447410-30447429 Msa0114060:intron 35.0%
ATTTGCAAAAAATGCTGCAC+AGG - chr1_3:30447455-30447474 Msa0114060:intron 35.0%
GTATACTGTCATTCCAGTAT+AGG - chr1_3:30447601-30447620 Msa0114060:CDS 35.0%
!!! CGACGACTTTTTTGTATCTT+TGG + chr1_3:30447646-30447665 None:intergenic 35.0%
AGATACAAAAAAGTCGTCGA+TGG - chr1_3:30447647-30447666 Msa0114060:CDS 35.0%
CAATACTTGTCAGGCAAAAT+TGG + chr1_3:30447673-30447692 None:intergenic 35.0%
! TTAAGTTTGGGTTTGAGTGT+AGG - chr1_3:30447896-30447915 Msa0114060:CDS 35.0%
ACAATCACAAGTGCAAAAGT+TGG + chr1_3:30447934-30447953 None:intergenic 35.0%
CAAGTTCAGAGAATACTTCT+CGG + chr1_3:30448101-30448120 None:intergenic 35.0%
AGTATTCTCTGAACTTGTAC+AGG - chr1_3:30448104-30448123 Msa0114060:intron 35.0%
GTATTCTCTGAACTTGTACA+GGG - chr1_3:30448105-30448124 Msa0114060:intron 35.0%
TATTCTCTGAACTTGTACAG+GGG - chr1_3:30448106-30448125 Msa0114060:intron 35.0%
TCTGGTTATGATGAAGAAGA+AGG - chr1_3:30448140-30448159 Msa0114060:intron 35.0%
!!! TAGAAGAGCACTCCTTTTAT+AGG - chr1_3:30448311-30448330 Msa0114060:intron 35.0%
TTCAATATGCTTTGTCATGC+TGG - chr1_3:30448550-30448569 Msa0114060:intron 35.0%
TGTCACATTACAACTTCAAC+AGG - chr1_3:30448604-30448623 Msa0114060:intron 35.0%
GAGAAGCAAGAAACAAAGAT+CGG + chr1_3:30448736-30448755 None:intergenic 35.0%
TGTTATTGTACCTTCGTGTA+GGG + chr1_3:30448774-30448793 None:intergenic 35.0%
ATGTTATTGTACCTTCGTGT+AGG + chr1_3:30448775-30448794 None:intergenic 35.0%
GGTTGGAAAATTGGTATACT+TGG + chr1_3:30449013-30449032 None:intergenic 35.0%
AGAATGAGTGGTTGAAATGA+AGG + chr1_3:30449114-30449133 None:intergenic 35.0%
TTCATTTCAACCACTCATTC+TGG - chr1_3:30449113-30449132 Msa0114060:intron 35.0%
GGAAGAGACTAGATATAGAA+AGG + chr1_3:30449186-30449205 None:intergenic 35.0%
CAATAAAAGGTTCTCTTTCC+TGG + chr1_3:30449212-30449231 None:intergenic 35.0%
! CAGGAAAGAGAACCTTTTAT+TGG - chr1_3:30449210-30449229 Msa0114060:intron 35.0%
! GAAAGAGAACCTTTTATTGG+AGG - chr1_3:30449213-30449232 Msa0114060:intron 35.0%
TGCATGAGTTACAGTAACAA+AGG + chr1_3:30449513-30449532 None:intergenic 35.0%
! TTTAAAGTCAGAAAACGGCA+TGG - chr1_3:30449725-30449744 Msa0114060:intron 35.0%
! GTGGGTTTTACAATCAGTTA+AGG + chr1_3:30449905-30449924 None:intergenic 35.0%
TAGACAGAACATACAAGTGT+GGG + chr1_3:30449923-30449942 None:intergenic 35.0%
! ATGTTCTGTCTACCACATTT+TGG - chr1_3:30449931-30449950 Msa0114060:intron 35.0%
TGCAAGGTATAAACATGTCT+AGG + chr1_3:30449994-30450013 None:intergenic 35.0%
TAGACATGTTTATACCTTGC+AGG - chr1_3:30449993-30450012 Msa0114060:intron 35.0%
! AGGTTTCTTTTACTGGACAA+GGG - chr1_3:30450013-30450032 Msa0114060:intron 35.0%
GTATGGCAAAGATAAGTGTA+AGG + chr1_3:30450089-30450108 None:intergenic 35.0%
! TCAAATAGATAAAAGGGTGC+CGG + chr1_3:30450123-30450142 None:intergenic 35.0%
TAGCACCCACAATGATAAAA+TGG + chr1_3:30450197-30450216 None:intergenic 35.0%
AAACAACACAAACCGAGTAT+GGG + chr1_3:30450402-30450421 None:intergenic 35.0%
AAAACAACACAAACCGAGTA+TGG + chr1_3:30450403-30450422 None:intergenic 35.0%
! GTAGGGTATTAAGTGTCATT+TGG - chr1_3:30450641-30450660 Msa0114060:intron 35.0%
! CAAAGGAACGAGAGTATAAA+AGG + chr1_3:30450777-30450796 None:intergenic 35.0%
! CTTTTATACTCTCGTTCCTT+TGG - chr1_3:30450775-30450794 Msa0114060:intron 35.0%
TTTATACTCTCGTTCCTTTG+GGG - chr1_3:30450777-30450796 Msa0114060:intron 35.0%
AAAGTTGCCGACAAGATATA+TGG - chr1_3:30450888-30450907 Msa0114060:intron 35.0%
AGTCACTCCATATATCTTGT+CGG + chr1_3:30450898-30450917 None:intergenic 35.0%
!!! GAACTCTAGAGCATCATTTT+CGG + chr1_3:30450955-30450974 None:intergenic 35.0%
!! TGCTCTAGAGTTCATTAATC+AGG - chr1_3:30450962-30450981 Msa0114060:intron 35.0%
CAGACACAAAATGCTGAATA+AGG - chr1_3:30450987-30451006 Msa0114060:intron 35.0%
! TTATTTGGAACCAGACAAAG+TGG - chr1_3:30451074-30451093 Msa0114060:intron 35.0%
GGAAGAAACTCATATTCTTG+TGG - chr1_3:30451095-30451114 Msa0114060:intron 35.0%
AGGGAAAAATGATAATCCCT+AGG - chr1_3:30451192-30451211 Msa0114060:intron 35.0%
AAAAATGATAATCCCTAGGC+TGG - chr1_3:30451196-30451215 Msa0114060:intron 35.0%
! TTTGGGGTAACAAACTGAAT+TGG - chr1_3:30451312-30451331 Msa0114060:intron 35.0%
CTTCCACTCCAGTATAAATT+TGG - chr1_3:30451465-30451484 Msa0114060:intron 35.0%
GTACCAAATTTATACTGGAG+TGG + chr1_3:30451471-30451490 None:intergenic 35.0%
GAACAAAATTAATGGCTCCA+TGG + chr1_3:30451724-30451743 None:intergenic 35.0%
CAAGTTAACGAACTTGACTT+CGG - chr1_3:30451743-30451762 Msa0114060:intron 35.0%
AAGTTAACGAACTTGACTTC+GGG - chr1_3:30451744-30451763 Msa0114060:intron 35.0%
AGCATTAACAGTTGCAATCA+TGG - chr1_3:30451815-30451834 Msa0114060:intron 35.0%
GCAACTCTAGCATTTGAATA+AGG + chr1_3:30451900-30451919 None:intergenic 35.0%
TTCAAATGCTAGAGTTGCAA+TGG - chr1_3:30451902-30451921 Msa0114060:intron 35.0%
! GAATCTCAGTTTGGCTTAAA+GGG - chr1_3:30451924-30451943 Msa0114060:intron 35.0%
! AGTTTGGCTTAAAGGGAATA+AGG - chr1_3:30451931-30451950 Msa0114060:intron 35.0%
! TTATGAACCAGAAACCCTTT+TGG - chr1_3:30451955-30451974 Msa0114060:intron 35.0%
TCCTTCTCAATTTACATGGA+TGG + chr1_3:30452131-30452150 None:intergenic 35.0%
CACTTCCTTCTCAATTTACA+TGG + chr1_3:30452135-30452154 None:intergenic 35.0%
! GCTAAATGACTTGCAATAGT+AGG + chr1_3:30452164-30452183 None:intergenic 35.0%
CTATTGCAAGTCATTTAGCA+AGG - chr1_3:30452165-30452184 Msa0114060:intron 35.0%
ACGAAATTGTCGACATTGAA+GGG + chr1_3:30452406-30452425 None:intergenic 35.0%
AACGAAATTGTCGACATTGA+AGG + chr1_3:30452407-30452426 None:intergenic 35.0%
TTAGGGCGAAAAAAAATGAC+AGG - chr1_3:30452660-30452679 Msa0114060:intron 35.0%
! CGGAGATTGATTTAGGGTTT+AGG + chr1_3:30432721-30432740 None:intergenic 40.0%
ATGAACCTAGAAAGGGTTAG+TGG + chr1_3:30433249-30433268 None:intergenic 40.0%
AGTCCTAGAGTTAACTGTGT+TGG - chr1_3:30433538-30433557 Msa0114060:intron 40.0%
!! TGCCGGCATAGTTTGTATTT+TGG - chr1_3:30433787-30433806 Msa0114060:intron 40.0%
GTGGAATAGGATCATACCAT+AGG + chr1_3:30433874-30433893 None:intergenic 40.0%
GTAACAAGATGGAGAGAAAC+AGG - chr1_3:30433978-30433997 Msa0114060:intron 40.0%
ATGGTTAGTGCTAAGATAGC+TGG + chr1_3:30434045-30434064 None:intergenic 40.0%
TTTGCGGTTACTCAGTGTTA+TGG + chr1_3:30434064-30434083 None:intergenic 40.0%
CCAAAGCCTTTGCAGAAATA+TGG + chr1_3:30434112-30434131 None:intergenic 40.0%
! CCATATTTCTGCAAAGGCTT+TGG - chr1_3:30434109-30434128 Msa0114060:intron 40.0%
! TATTTGTTGAGGCATGACCA+TGG - chr1_3:30434184-30434203 Msa0114060:intron 40.0%
GGAGTCTTTCGATTGGATTT+GGG + chr1_3:30434285-30434304 None:intergenic 40.0%
TGGAGTCTTTCGATTGGATT+TGG + chr1_3:30434286-30434305 None:intergenic 40.0%
CCAAAATGGAGTCTTTCGAT+TGG + chr1_3:30434292-30434311 None:intergenic 40.0%
! CCAATCGAAAGACTCCATTT+TGG - chr1_3:30434289-30434308 Msa0114060:intron 40.0%
!! GCTTAACTATTTCTGTGAGG+GGG - chr1_3:30434393-30434412 Msa0114060:CDS 40.0%
!! CTTAACTATTTCTGTGAGGG+GGG - chr1_3:30434394-30434413 Msa0114060:CDS 40.0%
CACATGAATTTGACCGAAAC+AGG + chr1_3:30434560-30434579 None:intergenic 40.0%
AGTTATAAGTACAGTGGCAC+AGG + chr1_3:30434682-30434701 None:intergenic 40.0%
CTTTGTGAAGTAGCTGAAAC+TGG - chr1_3:30434717-30434736 Msa0114060:intron 40.0%
TTTACTTCTGTTTCCTACCC+AGG - chr1_3:30434892-30434911 Msa0114060:intron 40.0%
!! CTCGGTTTTATCTGCATTTG+TGG - chr1_3:30434985-30435004 Msa0114060:intron 40.0%
!! GGAAGCATTGTTAGAGGAAT+TGG - chr1_3:30435334-30435353 Msa0114060:intron 40.0%
! TTGTCTGAAATGATGGGACT+AGG - chr1_3:30435523-30435542 Msa0114060:intron 40.0%
! TGTCTGAAATGATGGGACTA+GGG - chr1_3:30435524-30435543 Msa0114060:intron 40.0%
! GAGCCAACCATAGAAGTATA+TGG - chr1_3:30435584-30435603 Msa0114060:intron 40.0%
GCTAATGTGTTCCACTGAAA+GGG + chr1_3:30435799-30435818 None:intergenic 40.0%
GAGTTTCATTCCTCATCTTG+GGG + chr1_3:30435859-30435878 None:intergenic 40.0%
GGAGTTTCATTCCTCATCTT+GGG + chr1_3:30435860-30435879 None:intergenic 40.0%
AGGAGTTTCATTCCTCATCT+TGG + chr1_3:30435861-30435880 None:intergenic 40.0%
GCATGCATTCCTTTGATCAT+AGG + chr1_3:30435881-30435900 None:intergenic 40.0%
!!! GGAATGCATGCTGATTTTTC+TGG - chr1_3:30435890-30435909 Msa0114060:intron 40.0%
AAAGAAAGGAGAATAGGCCT+GGG + chr1_3:30435973-30435992 None:intergenic 40.0%
AAATTGAATCCTGTTGCAGC+AGG - chr1_3:30436034-30436053 Msa0114060:intron 40.0%
AATTGAATCCTGTTGCAGCA+GGG - chr1_3:30436035-30436054 Msa0114060:intron 40.0%
!! ATGCACCGATTTCTACACTT+TGG - chr1_3:30436195-30436214 Msa0114060:intron 40.0%
!! TGCACCGATTTCTACACTTT+GGG - chr1_3:30436196-30436215 Msa0114060:intron 40.0%
AACTGACAACTTGTGATGAC+TGG - chr1_3:30436294-30436313 Msa0114060:intron 40.0%
ATTCCATTCATGGATGTGCT+TGG - chr1_3:30436399-30436418 Msa0114060:intron 40.0%
AATGATATGGTTCTCTGGGT+TGG - chr1_3:30436478-30436497 Msa0114060:intron 40.0%
!!! TCTTGGGCATCTATTTTTGG+AGG - chr1_3:30436718-30436737 Msa0114060:intron 40.0%
!! CAGGACGATTGGTTTGAAAA+AGG - chr1_3:30436953-30436972 Msa0114060:intron 40.0%
! TGTGCAACAAGGAAAGGTAT+TGG - chr1_3:30437203-30437222 Msa0114060:CDS 40.0%
!! ATGCTGATGGTGCTATTGTT+TGG - chr1_3:30437229-30437248 Msa0114060:CDS 40.0%
GGAGTCTTTCATCAAGGTTA+GGG + chr1_3:30437332-30437351 None:intergenic 40.0%
CTTCAGTAAATCCAATCGCT+CGG + chr1_3:30437353-30437372 None:intergenic 40.0%
AGGTGGTACTAGAGTTTATG+AGG - chr1_3:30437378-30437397 Msa0114060:intron 40.0%
GTACTAGAGTTTATGAGGAG+AGG - chr1_3:30437383-30437402 Msa0114060:intron 40.0%
GTATTTAGACGAGAGGTTGA+AGG - chr1_3:30437570-30437589 Msa0114060:intron 40.0%
! AGGATTTTCTCTGCTTGTCA+AGG + chr1_3:30437636-30437655 None:intergenic 40.0%
TGACAAGCAGAGAAAATCCT+TGG - chr1_3:30437636-30437655 Msa0114060:intron 40.0%
ATTGAGAACTGTAATTCGGC+TGG + chr1_3:30438011-30438030 None:intergenic 40.0%
TTTATCCCTGTATGTATGGG+TGG + chr1_3:30438150-30438169 None:intergenic 40.0%
! ACCAGCATCTCCATTTTCTT+TGG - chr1_3:30438263-30438282 Msa0114060:intron 40.0%
TCCAAAGAAAATGGAGATGC+TGG + chr1_3:30438267-30438286 None:intergenic 40.0%
! ATTGATGACAGACCAGTCTA+TGG + chr1_3:30438313-30438332 None:intergenic 40.0%
ATTACTTTCCTCCACCTTTC+GGG + chr1_3:30438339-30438358 None:intergenic 40.0%
CATTACTTTCCTCCACCTTT+CGG + chr1_3:30438340-30438359 None:intergenic 40.0%
TGGAGGAAAGTAATGACCTT+TGG - chr1_3:30438345-30438364 Msa0114060:intron 40.0%
! GTTTCTGCTATAAAGTGCCA+TGG - chr1_3:30438441-30438460 Msa0114060:intron 40.0%
GGAATTCTTAACAACCCTGA+TGG + chr1_3:30438490-30438509 None:intergenic 40.0%
TTTGGAGAGACCAGACTATT+TGG - chr1_3:30438628-30438647 Msa0114060:intron 40.0%
AGATTTGGGTATGAATGAGG+TGG + chr1_3:30438684-30438703 None:intergenic 40.0%
! TCTTCTGCTCTTTAGTCTTC+TGG - chr1_3:30438701-30438720 Msa0114060:CDS 40.0%
GACAATTACAATAGAGAGGG+AGG + chr1_3:30438747-30438766 None:intergenic 40.0%
TAGAGGGATAAAAGGAGTCA+AGG + chr1_3:30438815-30438834 None:intergenic 40.0%
TATCCCTCTACTTGTGAACT+AGG - chr1_3:30438825-30438844 Msa0114060:intron 40.0%
ATCCCTCTACTTGTGAACTA+GGG - chr1_3:30438826-30438845 Msa0114060:intron 40.0%
! AAGGGAAGATCTCTGGAAAT+AGG - chr1_3:30439254-30439273 Msa0114060:CDS 40.0%
!!! ACCTACATGGTTTTAGGAAG+AGG - chr1_3:30439364-30439383 Msa0114060:intron 40.0%
TATAATGCATGCACTACGAG+GGG + chr1_3:30439561-30439580 None:intergenic 40.0%
TCGTGATAAGTGGCTTCAAA+AGG - chr1_3:30439807-30439826 Msa0114060:intron 40.0%
CATCAAACATAACACAGGCA+AGG - chr1_3:30439857-30439876 Msa0114060:intron 40.0%
ACAGGCAAGGGTTCATTTAA+TGG - chr1_3:30439870-30439889 Msa0114060:intron 40.0%
ATGATTAATATCCCCCTGGA+AGG - chr1_3:30440084-30440103 Msa0114060:intron 40.0%
GTGTAAGTTTGTATGCCTCT+AGG + chr1_3:30440241-30440260 None:intergenic 40.0%
TGGAAATTCCGCCTTAATTG+CGG - chr1_3:30440291-30440310 Msa0114060:intron 40.0%
CTAACCAAAGGTCGCAATTT+AGG + chr1_3:30440331-30440350 None:intergenic 40.0%
!! CTTCATTGTGTTGGCTTTGA+GGG - chr1_3:30440373-30440392 Msa0114060:intron 40.0%
!! TTCATTGTGTTGGCTTTGAG+GGG - chr1_3:30440374-30440393 Msa0114060:intron 40.0%
!! TCTTACAAGCCGGTTTTGTA+AGG - chr1_3:30440465-30440484 Msa0114060:CDS 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG - chr1_3:30440475-30440494 Msa0114060:CDS 40.0%
TTAGGCCCCAAATTTCAACA+TGG - chr1_3:30440493-30440512 Msa0114060:CDS 40.0%
GCCTATCCTAGATCTATCAT+TGG - chr1_3:30440523-30440542 Msa0114060:intron 40.0%
CAAACCAAAGGCCACAATTA+AGG + chr1_3:30440646-30440665 None:intergenic 40.0%
CTGCAATCAAAGCAAACCAA+AGG + chr1_3:30440658-30440677 None:intergenic 40.0%
!! CTTCACTGTGTTGGCTTTAA+GGG - chr1_3:30440688-30440707 Msa0114060:intron 40.0%
!! TTCACTGTGTTGGCTTTAAG+GGG - chr1_3:30440689-30440708 Msa0114060:intron 40.0%
AGTCCCACATCAGATAGATA+AGG - chr1_3:30440405-30440424 Msa0114060:CDS 40.0%
! GAGCCTTATCTATCTGATGT+GGG + chr1_3:30440726-30440745 None:intergenic 40.0%
! AGAGCCTTATCTATCTGATG+TGG + chr1_3:30440727-30440746 None:intergenic 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG - chr1_3:30440475-30440494 Msa0114060:CDS 40.0%
TGATGTGTTTCCTGATACTG+AGG - chr1_3:30440866-30440885 Msa0114060:intron 40.0%
GATGTGTTTCCTGATACTGA+GGG - chr1_3:30440867-30440886 Msa0114060:intron 40.0%
!! GGCATATAACTTGCTTCTAC+AGG + chr1_3:30440927-30440946 None:intergenic 40.0%
TAGAAGCAAGTTATATGCCC+TGG - chr1_3:30440928-30440947 Msa0114060:intron 40.0%
AGAAGCAAGTTATATGCCCT+GGG - chr1_3:30440929-30440948 Msa0114060:intron 40.0%
ATGAACCTAACACGGGATTT+AGG + chr1_3:30441298-30441317 None:intergenic 40.0%
! ACTGAGTATTTTACGGGTAG+TGG - chr1_3:30441384-30441403 Msa0114060:intron 40.0%
ATTGAGAGCAGAAGTTGAGA+AGG - chr1_3:30441754-30441773 Msa0114060:intron 40.0%
TAAGATATGCTACTCACACC+AGG + chr1_3:30441806-30441825 None:intergenic 40.0%
AATGTGCAGGATGTTAGAAG+AGG - chr1_3:30442142-30442161 Msa0114060:intron 40.0%
ATGTGCAGGATGTTAGAAGA+GGG - chr1_3:30442143-30442162 Msa0114060:intron 40.0%
GAAGAGGGTTGAATTCAGTT+CGG - chr1_3:30442158-30442177 Msa0114060:intron 40.0%
!! CAGAACATTTCTGGAGTTCA+CGG - chr1_3:30442196-30442215 Msa0114060:intron 40.0%
TTGAAGTTACAGCAGGAAAC+AGG - chr1_3:30442266-30442285 Msa0114060:intron 40.0%
CACCCTATGAATGTAACATG+TGG + chr1_3:30442320-30442339 None:intergenic 40.0%
!!! TTGTTTTGGAAATGGGGATG+GGG - chr1_3:30442345-30442364 Msa0114060:intron 40.0%
TCTTGGCCTGATCTCTTTAT+TGG - chr1_3:30442422-30442441 Msa0114060:intron 40.0%
!! GCCCACCTTTTTGTTGATTA+AGG + chr1_3:30442559-30442578 None:intergenic 40.0%
! GGAGCATTTACTCTGTTAAG+TGG + chr1_3:30442596-30442615 None:intergenic 40.0%
GTATATGGCAAGTCATCTTC+AGG - chr1_3:30442744-30442763 Msa0114060:CDS 40.0%
! ACTTACAAGCCAGTTTTGCA+TGG + chr1_3:30442853-30442872 None:intergenic 40.0%
GATTAAGGCCTATAAGTCGT+GGG + chr1_3:30442885-30442904 None:intergenic 40.0%
TGATTAAGGCCTATAAGTCG+TGG + chr1_3:30442886-30442905 None:intergenic 40.0%
TGTGTTAAAGAGTCTCGCAT+TGG + chr1_3:30442918-30442937 None:intergenic 40.0%
!! TGTGATGTTTTAGGCCTATC+AGG - chr1_3:30443254-30443273 Msa0114060:intron 40.0%
CACCATGCAATTTAGATAGC+AGG - chr1_3:30443284-30443303 Msa0114060:intron 40.0%
TTATAGAGTGCAGGATGAGA+TGG - chr1_3:30443342-30443361 Msa0114060:intron 40.0%
! ATTATGAGTATTGCCCTCAC+TGG - chr1_3:30443573-30443592 Msa0114060:CDS 40.0%
CAGTCTATCCAAGATTCGAT+GGG + chr1_3:30443632-30443651 None:intergenic 40.0%
TCAGTCTATCCAAGATTCGA+TGG + chr1_3:30443633-30443652 None:intergenic 40.0%
! GCTCATCCCAAATTCTAAGA+TGG + chr1_3:30443658-30443677 None:intergenic 40.0%
TCCTCTCCTCACCTTAAAAA+CGG + chr1_3:30443700-30443719 None:intergenic 40.0%
TGTACAAACCAGCAGTTTAC+GGG + chr1_3:30443948-30443967 None:intergenic 40.0%
!! ACTGCTGGTTTGTACATCTT+AGG - chr1_3:30443952-30443971 Msa0114060:intron 40.0%
GGCACATCTTACATTACAAC+TGG + chr1_3:30444011-30444030 None:intergenic 40.0%
TAATAGTGCTAAGCATGAGG+AGG + chr1_3:30444109-30444128 None:intergenic 40.0%
AGCTAATAGTGCTAAGCATG+AGG + chr1_3:30444112-30444131 None:intergenic 40.0%
!! CGGTTTTGTAAGGAAGAGTA+AGG + chr1_3:30444174-30444193 None:intergenic 40.0%
!! CCTAACAAGTCGGTTTTGTA+AGG + chr1_3:30444184-30444203 None:intergenic 40.0%
!! CCTTACAAAACCGACTTGTT+AGG - chr1_3:30444181-30444200 Msa0114060:intron 40.0%
!! AAAACCGACTTGTTAGGTGA+GGG - chr1_3:30444187-30444206 Msa0114060:intron 40.0%
TTTCCCTAACAGTCCAAAAG+TGG - chr1_3:30444268-30444287 Msa0114060:intron 40.0%
TTCCCTAACAGTCCAAAAGT+GGG - chr1_3:30444269-30444288 Msa0114060:intron 40.0%
!! TACCCACTTTTGGACTGTTA+GGG + chr1_3:30444274-30444293 None:intergenic 40.0%
TATCTGCAAGAATCTGGATG+TGG - chr1_3:30444636-30444655 Msa0114060:intron 40.0%
TGTTATGCAGTCCAAACCAT+TGG + chr1_3:30444680-30444699 None:intergenic 40.0%
GTGTGTCTGCATATTGTAGA+TGG - chr1_3:30444725-30444744 Msa0114060:intron 40.0%
GAGACAGACAACAATTTGTC+AGG + chr1_3:30444764-30444783 None:intergenic 40.0%
AAAAAAGGTAGTATGACCGG+AGG - chr1_3:30444805-30444824 Msa0114060:intron 40.0%
ACTGTCAGCATTCTGCTTAA+TGG + chr1_3:30444872-30444891 None:intergenic 40.0%
TGCTGACAGTATCCACATTA+AGG - chr1_3:30444882-30444901 Msa0114060:intron 40.0%
TGACAGTATCCACATTAAGG+AGG - chr1_3:30444885-30444904 Msa0114060:intron 40.0%
!!! TACGTGTTTTGGCAGTATAG+AGG - chr1_3:30445179-30445198 Msa0114060:intron 40.0%
!!! ACGTGTTTTGGCAGTATAGA+GGG - chr1_3:30445180-30445199 Msa0114060:intron 40.0%
CTGGTATCTTGGACATATAG+AGG - chr1_3:30445289-30445308 Msa0114060:intron 40.0%
! GCTGAGTTGAAGGAAATACA+AGG - chr1_3:30445391-30445410 Msa0114060:intron 40.0%
!! CGCTTGATTTGTTTATGACG+TGG - chr1_3:30445589-30445608 Msa0114060:intron 40.0%
CAGAGATAGAAGAGCTTAAG+CGG - chr1_3:30445800-30445819 Msa0114060:intron 40.0%
AGAGATAGAAGAGCTTAAGC+GGG - chr1_3:30445801-30445820 Msa0114060:intron 40.0%
!! TTCTAAAGCACTTGCCAAGA+AGG - chr1_3:30445858-30445877 Msa0114060:CDS 40.0%
TGCTACGAAAAAAGCTGAGA+TGG - chr1_3:30446053-30446072 Msa0114060:CDS 40.0%
GCTACGAAAAAAGCTGAGAT+GGG - chr1_3:30446054-30446073 Msa0114060:CDS 40.0%
TAGGAGAAGAAAACAAGAGC+TGG - chr1_3:30446318-30446337 Msa0114060:intron 40.0%
ATCATTAAGTTCCTCCCTCT+TGG + chr1_3:30446395-30446414 None:intergenic 40.0%
AGTTATTTGGCTGCAGTCTA+TGG - chr1_3:30446665-30446684 Msa0114060:intron 40.0%
TGTGACTTTGCAGAGAAGTT+TGG + chr1_3:30447074-30447093 None:intergenic 40.0%
CTTCTGTCTACATAAGTGCA+AGG + chr1_3:30447156-30447175 None:intergenic 40.0%
! TTACCTTTTTCTCTGCAGTG+TGG - chr1_3:30447359-30447378 Msa0114060:intron 40.0%
AAACCACACTGCAGAGAAAA+AGG + chr1_3:30447365-30447384 None:intergenic 40.0%
TTGGACATGACAGGTTCAAA+CGG - chr1_3:30447419-30447438 Msa0114060:intron 40.0%
!! TTTTGCCTGACAAGTATTGC+TGG - chr1_3:30447674-30447693 Msa0114060:CDS 40.0%
ATATAGGTCATTCCACATGC+AGG + chr1_3:30447798-30447817 None:intergenic 40.0%
ATCAAGTCTAGATCAACGGA+AGG - chr1_3:30448032-30448051 Msa0114060:intron 40.0%
TCAATAGAGCGCACTTTCAA+AGG - chr1_3:30448060-30448079 Msa0114060:intron 40.0%
ATTCTCTGAACTTGTACAGG+GGG - chr1_3:30448107-30448126 Msa0114060:intron 40.0%
TCATCATAACCAGATGACCA+TGG + chr1_3:30448134-30448153 None:intergenic 40.0%
AATGGACGAGCAGAAAATTC+CGG - chr1_3:30448494-30448513 Msa0114060:intron 40.0%
ATTCTGGGCTATGCTTATTG+CGG - chr1_3:30448578-30448597 Msa0114060:intron 40.0%
ATGGAATTTGTAAGGGCCTA+TGG + chr1_3:30448671-30448690 None:intergenic 40.0%
ATAGGCCCTTACAAATTCCA+TGG - chr1_3:30448670-30448689 Msa0114060:intron 40.0%
TAGGCCCTTACAAATTCCAT+GGG - chr1_3:30448671-30448690 Msa0114060:intron 40.0%
ATGGCCCATGGAATTTGTAA+GGG + chr1_3:30448678-30448697 None:intergenic 40.0%
AATGGCCCATGGAATTTGTA+AGG + chr1_3:30448679-30448698 None:intergenic 40.0%
TGTAGGGAAACTTGGTAAGT+TGG + chr1_3:30448758-30448777 None:intergenic 40.0%
GGAAGGGTTCTGTAAAAGAT+AGG + chr1_3:30448809-30448828 None:intergenic 40.0%
! TCGAAGAATAGACCCTTTTC+TGG - chr1_3:30448873-30448892 Msa0114060:intron 40.0%
! CGAAGAATAGACCCTTTTCT+GGG - chr1_3:30448874-30448893 Msa0114060:intron 40.0%
! GAAGAATAGACCCTTTTCTG+GGG - chr1_3:30448875-30448894 Msa0114060:intron 40.0%
GTAAAAGCTACCCCAGAAAA+GGG + chr1_3:30448888-30448907 None:intergenic 40.0%
TCCTTGTGAAGATCATCTTG+AGG + chr1_3:30448932-30448951 None:intergenic 40.0%
AAACTGACTGACAACACAGA+CGG - chr1_3:30448960-30448979 Msa0114060:intron 40.0%
!! GGGAGATACTATAAGTTGGT+TGG + chr1_3:30449030-30449049 None:intergenic 40.0%
! TTTGGGATCCATAGGAGTAT+TGG - chr1_3:30449084-30449103 Msa0114060:intron 40.0%
! GGGAGAGTAGAAAAGTACAT+TGG - chr1_3:30449626-30449645 Msa0114060:intron 40.0%
GTACATTGGAGTGAAAGTGA+AGG - chr1_3:30449640-30449659 Msa0114060:intron 40.0%
TCAGTTAAGGGTCAGAAAAC+AGG + chr1_3:30449892-30449911 None:intergenic 40.0%
GTAGACAGAACATACAAGTG+TGG + chr1_3:30449924-30449943 None:intergenic 40.0%
!! TCTGTCTACCACATTTTGGT+TGG - chr1_3:30449935-30449954 Msa0114060:intron 40.0%
!!! CTGTCTACCACATTTTGGTT+GGG - chr1_3:30449936-30449955 Msa0114060:intron 40.0%
!!! TGTCTACCACATTTTGGTTG+GGG - chr1_3:30449937-30449956 Msa0114060:intron 40.0%
! ACCTTGCAGGTTTCTTTTAC+TGG - chr1_3:30450006-30450025 Msa0114060:intron 40.0%
TCCAGTAAAAGAAACCTGCA+AGG + chr1_3:30450010-30450029 None:intergenic 40.0%
! CAGGTTTCTTTTACTGGACA+AGG - chr1_3:30450012-30450031 Msa0114060:intron 40.0%
! GGTTTCTTTTACTGGACAAG+GGG - chr1_3:30450014-30450033 Msa0114060:intron 40.0%
ACAGTCCATGAAACAGCTAT+CGG - chr1_3:30450041-30450060 Msa0114060:intron 40.0%
GCATTGCATATTAGAGGTGA+AGG - chr1_3:30450296-30450315 Msa0114060:CDS 40.0%
AAGGTTTCAGTTGCACTTAG+AGG - chr1_3:30450315-30450334 Msa0114060:CDS 40.0%
GGTAAGGAACCACATACTTA+AGG + chr1_3:30450366-30450385 None:intergenic 40.0%
! AGTATGGGTTGCATGTTCAA+TGG + chr1_3:30450387-30450406 None:intergenic 40.0%
TTGAACATGCAACCCATACT+CGG - chr1_3:30450387-30450406 Msa0114060:intron 40.0%
TGTCTCAGTAAAGCTACACA+AGG - chr1_3:30450571-30450590 Msa0114060:intron 40.0%
AAAGCTACACAAGGCTTGAA+TGG - chr1_3:30450580-30450599 Msa0114060:intron 40.0%
ATGGAGTGACTCACAAAAAC+AGG - chr1_3:30450907-30450926 Msa0114060:intron 40.0%
TGGAGTGACTCACAAAAACA+GGG - chr1_3:30450908-30450927 Msa0114060:intron 40.0%
GAATGCTCGTCACTCTTATT+TGG - chr1_3:30451059-30451078 Msa0114060:intron 40.0%
TGAGTTTCTTCCACTTTGTC+TGG + chr1_3:30451087-30451106 None:intergenic 40.0%
GGTCATTTACCAAGGACTAT+GGG + chr1_3:30451425-30451444 None:intergenic 40.0%
AGGTCATTTACCAAGGACTA+TGG + chr1_3:30451426-30451445 None:intergenic 40.0%
CTATTGCAGGTCATTTACCA+AGG + chr1_3:30451433-30451452 None:intergenic 40.0%
TGGTAAATGACCTGCAATAG+CGG - chr1_3:30451433-30451452 Msa0114060:intron 40.0%
CCTGTTAGACTTGAAACAGA+TGG + chr1_3:30451516-30451535 None:intergenic 40.0%
! CCATCTGTTTCAAGTCTAAC+AGG - chr1_3:30451513-30451532 Msa0114060:intron 40.0%
TCGTTGTTACATTCTCTGTG+CGG + chr1_3:30451550-30451569 None:intergenic 40.0%
TTTCGAATAAGCTGTCACGA+TGG + chr1_3:30451661-30451680 None:intergenic 40.0%
AACAGTTGCAATCATGGTAG+CGG - chr1_3:30451821-30451840 Msa0114060:intron 40.0%
GTTGCAATGGAATCTCAGTT+TGG - chr1_3:30451915-30451934 Msa0114060:intron 40.0%
! GGAATCTCAGTTTGGCTTAA+AGG - chr1_3:30451923-30451942 Msa0114060:intron 40.0%
GCCATCCATGTAAATTGAGA+AGG - chr1_3:30452127-30452146 Msa0114060:intron 40.0%
AAGTCATTTAGCAAGGACCA+TGG - chr1_3:30452172-30452191 Msa0114060:intron 40.0%
AGTCATTTAGCAAGGACCAT+GGG - chr1_3:30452173-30452192 Msa0114060:intron 40.0%
!! TTTTATTTAGGGTCCACCCA+TGG + chr1_3:30452192-30452211 None:intergenic 40.0%
ATGGGTGGACCCTAAATAAA+AGG - chr1_3:30452191-30452210 Msa0114060:intron 40.0%
TGGGTGGACCCTAAATAAAA+GGG - chr1_3:30452192-30452211 Msa0114060:intron 40.0%
! TTCTGAGAGCTGATATAGGT+CGG + chr1_3:30452383-30452402 None:intergenic 40.0%
CAGTTAACAAAAGAGCAGGT+TGG + chr1_3:30452440-30452459 None:intergenic 40.0%
AACTGCTGCTACCATAACAT+AGG - chr1_3:30452455-30452474 Msa0114060:intron 40.0%
AGATATTCTCCGTGGATCTA+CGG + chr1_3:30452568-30452587 None:intergenic 40.0%
TAGATCCACGGAGAATATCT+GGG - chr1_3:30452568-30452587 Msa0114060:intron 40.0%
TCTCTCTGGTAGGTTTCTCT+CGG - chr1_3:30432587-30432606 Msa0114060:three_prime_UTR 45.0%
ACATACGAATGGAAGGCAAG+TGG - chr1_3:30433210-30433229 Msa0114060:intron 45.0%
! TCTAGGACTGAAATCCTCTG+TGG + chr1_3:30433527-30433546 None:intergenic 45.0%
! GCGTTGCCATATTTCTGCAA+AGG - chr1_3:30434103-30434122 Msa0114060:intron 45.0%
AAGTACAGTGGCACAGGAAA+TGG + chr1_3:30434676-30434695 None:intergenic 45.0%
CTTTCAAAACCTACGCAGTG+AGG - chr1_3:30434818-30434837 Msa0114060:intron 45.0%
AAAACCTACGCAGTGAGGAT+AGG - chr1_3:30434823-30434842 Msa0114060:intron 45.0%
! AGAATTGATTAGCCCTGCCT+GGG + chr1_3:30434912-30434931 None:intergenic 45.0%
! TAGAATTGATTAGCCCTGCC+TGG + chr1_3:30434913-30434932 None:intergenic 45.0%
!! GTCTGTGGAAGCATTGTTAG+AGG - chr1_3:30435328-30435347 Msa0114060:intron 45.0%
!!! GTTGGCTCGAGTTTTCATTG+AGG + chr1_3:30435572-30435591 None:intergenic 45.0%
! AAGGGGCGACGATTCTATTT+TGG + chr1_3:30435665-30435684 None:intergenic 45.0%
!! CAGCAGCTCTACTGGTTTAA+GGG - chr1_3:30435710-30435729 Msa0114060:CDS 45.0%
! AAGGGCCTGATACGTTTTGT+TGG - chr1_3:30435728-30435747 Msa0114060:intron 45.0%
GGCTAATGTGTTCCACTGAA+AGG + chr1_3:30435800-30435819 None:intergenic 45.0%
TTTCATTCCTCATCTTGGGG+AGG + chr1_3:30435856-30435875 None:intergenic 45.0%
GAAAGAAAGGAGAATAGGCC+TGG + chr1_3:30435974-30435993 None:intergenic 45.0%
ATGCCAAGCACATCCATGAA+TGG + chr1_3:30436405-30436424 None:intergenic 45.0%
ATGTGCTTGGCATTGTTCTC+TGG - chr1_3:30436412-30436431 Msa0114060:intron 45.0%
TGTGCTTGGCATTGTTCTCT+GGG - chr1_3:30436413-30436432 Msa0114060:intron 45.0%
! CTTGATTGGGCACATGCTTT+TGG - chr1_3:30436745-30436764 Msa0114060:intron 45.0%
TCCTATTTGTGTCGGAGGAT+AGG - chr1_3:30436905-30436924 Msa0114060:intron 45.0%
ACCTATCCTCCGACACAAAT+AGG + chr1_3:30436909-30436928 None:intergenic 45.0%
!! AAGGTATTGGTGCATGCTGA+TGG - chr1_3:30437216-30437235 Msa0114060:CDS 45.0%
CGGAGTCTTTCATCAAGGTT+AGG + chr1_3:30437333-30437352 None:intergenic 45.0%
CGAGCGATTGGATTTACTGA+AGG - chr1_3:30437351-30437370 Msa0114060:intron 45.0%
TGCTCAACAAAAGCTTGCAG+AGG - chr1_3:30437690-30437709 Msa0114060:intron 45.0%
GGGTGTAGCTAAATAGACAG+TGG - chr1_3:30437952-30437971 Msa0114060:intron 45.0%
GATTGGACCAACAAATGGGA+AGG - chr1_3:30438046-30438065 Msa0114060:intron 45.0%
! ATGGGTGGCGGTTACTATTA+TGG + chr1_3:30438135-30438154 None:intergenic 45.0%
CTGTCATCAATTTGCCCGAA+AGG - chr1_3:30438322-30438341 Msa0114060:intron 45.0%
TCATCAATTTGCCCGAAAGG+TGG - chr1_3:30438325-30438344 Msa0114060:intron 45.0%
!! TGATTAGGGATGGTGGACAA+TGG - chr1_3:30438394-30438413 Msa0114060:intron 45.0%
CTCTGCGAAACCAAATAGTC+TGG + chr1_3:30438641-30438660 None:intergenic 45.0%
! ACTATTTGGTTTCGCAGAGC+AGG - chr1_3:30438642-30438661 Msa0114060:intron 45.0%
! GTTTCGCAGAGCAGGTTTTA+GGG - chr1_3:30438650-30438669 Msa0114060:intron 45.0%
! CTCTTTAGTCTTCTGGCAGT+TGG - chr1_3:30438708-30438727 Msa0114060:CDS 45.0%
CACCCTAGTTCACAAGTAGA+GGG + chr1_3:30438831-30438850 None:intergenic 45.0%
TCACCCTAGTTCACAAGTAG+AGG + chr1_3:30438832-30438851 None:intergenic 45.0%
GGAGTCAAGAATCTACCTTC+AGG + chr1_3:30439011-30439030 None:intergenic 45.0%
GATAGAACAAGCTCGGAACA+AGG - chr1_3:30439039-30439058 Msa0114060:intron 45.0%
GACTTACAAGGGAAGATCTC+TGG - chr1_3:30439247-30439266 Msa0114060:CDS 45.0%
GCCTCTTCCTAAAACCATGT+AGG + chr1_3:30439368-30439387 None:intergenic 45.0%
! CATTACCAAGGGGTATGTTG+TGG - chr1_3:30439490-30439509 Msa0114060:CDS 45.0%
TACAACCACAACATACCCCT+TGG + chr1_3:30439498-30439517 None:intergenic 45.0%
GTAAAGCTGCTCGTGATAAG+TGG - chr1_3:30439797-30439816 Msa0114060:intron 45.0%
CTGCATGATTAATATCCCCC+TGG - chr1_3:30440080-30440099 Msa0114060:intron 45.0%
AAGTTGAAGTTCCTTCCAGG+GGG + chr1_3:30440098-30440117 None:intergenic 45.0%
! CAAGTTGAAGTTCCTTCCAG+GGG + chr1_3:30440099-30440118 None:intergenic 45.0%
! GCAAGTTGAAGTTCCTTCCA+GGG + chr1_3:30440100-30440119 None:intergenic 45.0%
! TGCAAGTTGAAGTTCCTTCC+AGG + chr1_3:30440101-30440120 None:intergenic 45.0%
!! CAACACAATGAAGGTGTTGG+AGG + chr1_3:30440366-30440385 None:intergenic 45.0%
CTCCAACACCTTCATTGTGT+TGG - chr1_3:30440364-30440383 Msa0114060:intron 45.0%
! AGCCAACACAATGAAGGTGT+TGG + chr1_3:30440369-30440388 None:intergenic 45.0%
CCTCAAAGCCAACACAATGA+AGG + chr1_3:30440375-30440394 None:intergenic 45.0%
!! CCTTCATTGTGTTGGCTTTG+AGG - chr1_3:30440372-30440391 Msa0114060:intron 45.0%
!! CAAAACCGGCTTGTAAGATG+AGG + chr1_3:30440463-30440482 None:intergenic 45.0%
TGGGAATTCCGCCTTTATTG+CGG - chr1_3:30440606-30440625 Msa0114060:CDS 45.0%
CCTTAAAGCCAACACAGTGA+AGG + chr1_3:30440690-30440709 None:intergenic 45.0%
!! CCTTCACTGTGTTGGCTTTA+AGG - chr1_3:30440687-30440706 Msa0114060:intron 45.0%
!! TCACTGTGTTGGCTTTAAGG+GGG - chr1_3:30440690-30440709 Msa0114060:intron 45.0%
!! CAAAACCGGCTTGTAAGGTA+AGG + chr1_3:30440778-30440797 None:intergenic 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG + chr1_3:30440468-30440487 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG - chr1_3:30440780-30440799 Msa0114060:intron 45.0%
CAAAAACAAAAGTCAGCGGC+TGG + chr1_3:30441036-30441055 None:intergenic 45.0%
! GAGCAGCTTTTCACAATCAG+AGG + chr1_3:30441071-30441090 None:intergenic 45.0%
AACACGGGATTTAGGAAGTG+AGG + chr1_3:30441290-30441309 None:intergenic 45.0%
CACTTCCTAAATCCCGTGTT+AGG - chr1_3:30441290-30441309 Msa0114060:intron 45.0%
GTTGAGCCATGTGATACTTG+TGG - chr1_3:30441332-30441351 Msa0114060:intron 45.0%
! TAGTGGAACTTTTGTGCCAC+AGG - chr1_3:30441401-30441420 Msa0114060:intron 45.0%
!! TCCATCAGCTTTTTCTCCTG+TGG + chr1_3:30441420-30441439 None:intergenic 45.0%
CGGCTTAATGATGAAATGCG+TGG - chr1_3:30441450-30441469 Msa0114060:intron 45.0%
AGTAGAAAGAGACAGCCTTC+AGG - chr1_3:30441563-30441582 Msa0114060:intron 45.0%
AGTCTTGATCATGCGATTCC+TGG - chr1_3:30441785-30441804 Msa0114060:intron 45.0%
! CTTGAGATTGATGGCAGTGA+AGG - chr1_3:30441877-30441896 Msa0114060:intron 45.0%
ATGACAGATCATCCCCAAAC+TGG + chr1_3:30442073-30442092 None:intergenic 45.0%
TCCTGCTGTAACTTCAACTG+CGG + chr1_3:30442263-30442282 None:intergenic 45.0%
AAGCTAACCTGACTGAATGC+TGG + chr1_3:30442692-30442711 None:intergenic 45.0%
TTGGGCCAAACCCAAATTCT+AGG + chr1_3:30442825-30442844 None:intergenic 45.0%
! CAGTTTTGCATGGCTGAGTT+GGG + chr1_3:30442843-30442862 None:intergenic 45.0%
GAGAACTACCCACGACTTAT+AGG - chr1_3:30442874-30442893 Msa0114060:intron 45.0%
!! GGTCACACTCTAGCTTTCTT+GGG + chr1_3:30442952-30442971 None:intergenic 45.0%
!! AGGTCACACTCTAGCTTTCT+TGG + chr1_3:30442953-30442972 None:intergenic 45.0%
!! AGGAGGTCGGTTTTGTGTTT+AGG - chr1_3:30443220-30443239 Msa0114060:intron 45.0%
ATGGGTCGTCTGATCAATGA+CGG + chr1_3:30443614-30443633 None:intergenic 45.0%
!! CGGTTTTGTAGGGTTGAGTT+AGG + chr1_3:30443680-30443699 None:intergenic 45.0%
!!! ACCGTTTTTAAGGTGAGGAG+AGG - chr1_3:30443696-30443715 Msa0114060:intron 45.0%
AGGCCATATTGCATCCAATG+TGG - chr1_3:30443747-30443766 Msa0114060:CDS 45.0%
GGCCATATTGCATCCAATGT+GGG - chr1_3:30443748-30443767 Msa0114060:CDS 45.0%
GTCCCACATTGGATGCAATA+TGG + chr1_3:30443753-30443772 None:intergenic 45.0%
GTTGAGCAGCATGTTGAGTT+AGG - chr1_3:30443804-30443823 Msa0114060:CDS 45.0%
CAGTTTACGGGAAAGAGAAG+GGG + chr1_3:30443936-30443955 None:intergenic 45.0%
GCAGTTTACGGGAAAGAGAA+GGG + chr1_3:30443937-30443956 None:intergenic 45.0%
AGCAGTTTACGGGAAAGAGA+AGG + chr1_3:30443938-30443957 None:intergenic 45.0%
TTCTCTTTCCCGTAAACTGC+TGG - chr1_3:30443937-30443956 Msa0114060:intron 45.0%
! AGCACTATTAGCTTGATGCG+TGG - chr1_3:30444119-30444138 Msa0114060:intron 45.0%
!! CAAAACCGACTTGTTAGGTG+AGG - chr1_3:30444186-30444205 Msa0114060:intron 45.0%
!! AAACCGACTTGTTAGGTGAG+GGG - chr1_3:30444188-30444207 Msa0114060:intron 45.0%
!! GTACCCACTTTTGGACTGTT+AGG + chr1_3:30444275-30444294 None:intergenic 45.0%
! TCTTCCATCGTACCCACTTT+TGG + chr1_3:30444284-30444303 None:intergenic 45.0%
! TAGGTTTGAAGTGCTCCTCT+TGG + chr1_3:30444508-30444527 None:intergenic 45.0%
GAATCTGGATGTGGCTTCAA+AGG - chr1_3:30444645-30444664 Msa0114060:intron 45.0%
TCAAAGGTAGCTCGTACCAA+TGG - chr1_3:30444661-30444680 Msa0114060:intron 45.0%
! TGGTTTGGACTGCATAACAC+TGG - chr1_3:30444681-30444700 Msa0114060:intron 45.0%
TTGGACTGCATAACACTGGA+AGG - chr1_3:30444685-30444704 Msa0114060:intron 45.0%
CAGTATCCACATTAAGGAGG+AGG - chr1_3:30444888-30444907 Msa0114060:intron 45.0%
CCAATTCCTCCTCCTTAATG+TGG + chr1_3:30444897-30444916 None:intergenic 45.0%
CCACATTAAGGAGGAGGAAT+TGG - chr1_3:30444894-30444913 Msa0114060:intron 45.0%
! AATGTGGCAAGCTGAGTTGA+AGG - chr1_3:30445381-30445400 Msa0114060:intron 45.0%
ATAGAAAGGAAGCTCGTGAG+TGG + chr1_3:30445916-30445935 None:intergenic 45.0%
TTGCAAGACTGATCGCATTG+AGG - chr1_3:30446170-30446189 Msa0114060:CDS 45.0%
GAGAAGAAAACAAGAGCTGG+AGG - chr1_3:30446321-30446340 Msa0114060:intron 45.0%
TTGCTGATGCCAATTCCAAG+AGG - chr1_3:30446377-30446396 Msa0114060:intron 45.0%
TGCTGATGCCAATTCCAAGA+GGG - chr1_3:30446378-30446397 Msa0114060:intron 45.0%
AAGTTCCTCCCTCTTGGAAT+TGG + chr1_3:30446389-30446408 None:intergenic 45.0%
TATTTGGCTGCAGTCTATGG+AGG - chr1_3:30446668-30446687 Msa0114060:intron 45.0%
! GAGTCGTAAGTTTTGCCTAG+CGG - chr1_3:30446828-30446847 Msa0114060:intron 45.0%
! TGGAGTATTTGCAAGGCACA+AGG + chr1_3:30447054-30447073 None:intergenic 45.0%
AGACAAGCTGAACTTGATGC+AGG - chr1_3:30447571-30447590 Msa0114060:intron 45.0%
TGAACTTGATGCAGGAGATG+AGG - chr1_3:30447579-30447598 Msa0114060:intron 45.0%
CAGAACCAGCAATACTTGTC+AGG + chr1_3:30447682-30447701 None:intergenic 45.0%
!! GCACTTTCAAAGGTGTTGCT+AGG - chr1_3:30448070-30448089 Msa0114060:intron 45.0%
TTCTCTGAACTTGTACAGGG+GGG - chr1_3:30448108-30448127 Msa0114060:intron 45.0%
TGTCATGCTGGATGAGATTC+TGG - chr1_3:30448562-30448581 Msa0114060:intron 45.0%
GTCATGCTGGATGAGATTCT+GGG - chr1_3:30448563-30448582 Msa0114060:intron 45.0%
TACCAAGTTTCCCTACACGA+AGG - chr1_3:30448761-30448780 Msa0114060:intron 45.0%
TACCTTCGTGTAGGGAAACT+TGG + chr1_3:30448766-30448785 None:intergenic 45.0%
CGTAAAAGCTACCCCAGAAA+AGG + chr1_3:30448889-30448908 None:intergenic 45.0%
GCCTCAAGATGATCTTCACA+AGG - chr1_3:30448928-30448947 Msa0114060:intron 45.0%
AACTGACTGACAACACAGAC+GGG - chr1_3:30448961-30448980 Msa0114060:intron 45.0%
! AAGGCTAGCCAATACTCCTA+TGG + chr1_3:30449095-30449114 None:intergenic 45.0%
TTGCAGGAAACCAGAATGAG+TGG + chr1_3:30449126-30449145 None:intergenic 45.0%
!! TCATTCTGGTTTCCTGCAAG+AGG - chr1_3:30449127-30449146 Msa0114060:intron 45.0%
TATCTAGTCTCTTCCATGCC+AGG - chr1_3:30449191-30449210 Msa0114060:intron 45.0%
AAAGGTTCTCTTTCCTGGCA+TGG + chr1_3:30449207-30449226 None:intergenic 45.0%
! GTTTTCTTGCTCCTGTTTGC+AGG - chr1_3:30449408-30449427 Msa0114060:intron 45.0%
! CGATGATGATGATCAAGACG+AGG - chr1_3:30449577-30449596 Msa0114060:intron 45.0%
GATGATGATCAAGACGAGGA+TGG - chr1_3:30449581-30449600 Msa0114060:intron 45.0%
! TACTTTTCTACTCTCCCCTC+TGG + chr1_3:30449623-30449642 None:intergenic 45.0%
!!! CACATTTTGGTTGGGGATGT+GGG - chr1_3:30449944-30449963 Msa0114060:intron 45.0%
CAGTCCATGAAACAGCTATC+GGG - chr1_3:30450042-30450061 Msa0114060:intron 45.0%
TGCCATACAGAGATGTGATC+CGG - chr1_3:30450101-30450120 Msa0114060:intron 45.0%
TGACGAGATTGATGCAGCAT+TGG - chr1_3:30450140-30450159 Msa0114060:intron 45.0%
CAGCATGCAGTAAATGCTGA+TGG + chr1_3:30450253-30450272 None:intergenic 45.0%
CTTAGAGGATCTTCGACCAT+TGG - chr1_3:30450330-30450349 Msa0114060:intron 45.0%
GGGTTGCATGTTCAATGGTA+AGG + chr1_3:30450382-30450401 None:intergenic 45.0%
! TGTCATTTGGTCCATGTCAG+TGG - chr1_3:30450654-30450673 Msa0114060:CDS 45.0%
TGAAAGTCAAGGATCCCCAA+AGG + chr1_3:30450794-30450813 None:intergenic 45.0%
!! CAACTTTCACTAGCTCTGGA+CGG + chr1_3:30450875-30450894 None:intergenic 45.0%
GGTAAATGACCTGCAATAGC+GGG - chr1_3:30451434-30451453 Msa0114060:intron 45.0%
GTGTAATTACCCGCTATTGC+AGG + chr1_3:30451446-30451465 None:intergenic 45.0%
! GAACCAGAAACCCTTTTGGA+TGG - chr1_3:30451959-30451978 Msa0114060:intron 45.0%
TAGCCATCCAAAAGGGTTTC+TGG + chr1_3:30451965-30451984 None:intergenic 45.0%
AAACAGGGGAGTCCCTAATA+TGG + chr1_3:30452219-30452238 None:intergenic 45.0%
!! AGGGTTCTGAGAGCTGATAT+AGG + chr1_3:30452387-30452406 None:intergenic 45.0%
GCAGCAGTTAACAAAAGAGC+AGG + chr1_3:30452444-30452463 None:intergenic 45.0%
CCATGATAACCGTAGATCCA+CGG - chr1_3:30452556-30452575 Msa0114060:intron 45.0%
GTAGATCCACGGAGAATATC+TGG - chr1_3:30452567-30452586 Msa0114060:intron 45.0%
!!! ATTTTATTTTGTTTTTTTAT+AGG + chr1_3:30443443-30443462 None:intergenic 5.0%
!! TAAAAAAACAAAATAAAATT+TGG - chr1_3:30443444-30443463 Msa0114060:intron 5.0%
!! AAAAAAACAAAATAAAATTT+GGG - chr1_3:30443445-30443464 Msa0114060:intron 5.0%
!!! AATTGTTTATTTTTTATTTT+TGG - chr1_3:30451294-30451313 Msa0114060:intron 5.0%
!!! ATTGTTTATTTTTTATTTTT+GGG - chr1_3:30451295-30451314 Msa0114060:intron 5.0%
TCTCTCTCTCTCTCTCTCTC+TGG - chr1_3:30432563-30432582 Msa0114060:three_prime_UTR 50.0%
TCTCTCTCTCTCTCTCTGGT+AGG - chr1_3:30432577-30432596 Msa0114060:three_prime_UTR 50.0%
TCGAGAGCAAATTGCCACAG+AGG - chr1_3:30433510-30433529 Msa0114060:intron 50.0%
!! GCAGTTGGTGCTAATGGATC+TGG - chr1_3:30434618-30434637 Msa0114060:intron 50.0%
GGCATGCACTACTCCATGTA+TGG - chr1_3:30434844-30434863 Msa0114060:intron 50.0%
TTCTGTTTCCTACCCAGGCA+GGG - chr1_3:30434897-30434916 Msa0114060:intron 50.0%
GAAGAGTCCTCTGCAATGGT+TGG - chr1_3:30435269-30435288 Msa0114060:CDS 50.0%
GTAACAGGCTGTCCAATCCA+AGG + chr1_3:30435636-30435655 None:intergenic 50.0%
AGAATCGTCGCCCCTTGATT+TGG - chr1_3:30435669-30435688 Msa0114060:CDS 50.0%
GAATCGTCGCCCCTTGATTT+GGG - chr1_3:30435670-30435689 Msa0114060:CDS 50.0%
!! GCAGCAGCTCTACTGGTTTA+AGG - chr1_3:30435709-30435728 Msa0114060:CDS 50.0%
ATCTTGGGGAGGACACTAAG+GGG + chr1_3:30435845-30435864 None:intergenic 50.0%
CATCTTGGGGAGGACACTAA+GGG + chr1_3:30435846-30435865 None:intergenic 50.0%
TCATCTTGGGGAGGACACTA+AGG + chr1_3:30435847-30435866 None:intergenic 50.0%
TTAGTGTCCTCCCCAAGATG+AGG - chr1_3:30435846-30435865 Msa0114060:intron 50.0%
CTCACTGTTCCTCCCTACTT+GGG - chr1_3:30435945-30435964 Msa0114060:intron 50.0%
!! GTCATTTTCCCTGCTGCAAC+AGG + chr1_3:30436046-30436065 None:intergenic 50.0%
GTGCTTGGCATTGTTCTCTG+GGG - chr1_3:30436414-30436433 Msa0114060:intron 50.0%
! CGGAGGATAGGTTGACAAAG+AGG - chr1_3:30436917-30436936 Msa0114060:intron 50.0%
! AAGAGGAAGTGCACTTACGC+AGG - chr1_3:30436934-30436953 Msa0114060:intron 50.0%
TCGCTCGGAGTCTTTCATCA+AGG + chr1_3:30437338-30437357 None:intergenic 50.0%
GATGAAAGACTCCGAGCGAT+TGG - chr1_3:30437339-30437358 Msa0114060:intron 50.0%
GAGGTTGAAGGAACTAGACG+AGG - chr1_3:30437582-30437601 Msa0114060:intron 50.0%
GGAACTAGACGAGGAGAAAG+AGG - chr1_3:30437591-30437610 Msa0114060:intron 50.0%
GAGAACTGTAATTCGGCTGG+AGG + chr1_3:30438008-30438027 None:intergenic 50.0%
GTGGCGGTTACTATTATGGC+AGG + chr1_3:30438131-30438150 None:intergenic 50.0%
TAACCGCCACCCATACATAC+AGG - chr1_3:30438141-30438160 Msa0114060:intron 50.0%
AACCGCCACCCATACATACA+GGG - chr1_3:30438142-30438161 Msa0114060:intron 50.0%
ATCCCTGTATGTATGGGTGG+CGG + chr1_3:30438147-30438166 None:intergenic 50.0%
ACAGACCAGTCTATGGCACA+AGG + chr1_3:30438306-30438325 None:intergenic 50.0%
TCAATTTGCCCGAAAGGTGG+AGG - chr1_3:30438328-30438347 Msa0114060:intron 50.0%
TGCTGCTGTCCGTCACAAAT+TGG - chr1_3:30438464-30438483 Msa0114060:intron 50.0%
TCCGTCACAAATTGGCCATC+AGG - chr1_3:30438472-30438491 Msa0114060:intron 50.0%
CCCTGATGGCCAATTTGTGA+CGG + chr1_3:30438476-30438495 None:intergenic 50.0%
CCGTCACAAATTGGCCATCA+GGG - chr1_3:30438473-30438492 Msa0114060:intron 50.0%
! GGTTTCGCAGAGCAGGTTTT+AGG - chr1_3:30438649-30438668 Msa0114060:intron 50.0%
ATGTTGGGCTGATCGGGAAT+TGG + chr1_3:30438792-30438811 None:intergenic 50.0%
TCAAGGATGTTGGGCTGATC+GGG + chr1_3:30438798-30438817 None:intergenic 50.0%
GTCAAGGATGTTGGGCTGAT+CGG + chr1_3:30438799-30438818 None:intergenic 50.0%
GTCGCAATTTAGGCGACTAG+GGG + chr1_3:30440321-30440340 None:intergenic 50.0%
GGTCGCAATTTAGGCGACTA+GGG + chr1_3:30440322-30440341 None:intergenic 50.0%
AGGTCGCAATTTAGGCGACT+AGG + chr1_3:30440323-30440342 None:intergenic 50.0%
GTCGCCTAAATTGCGACCTT+TGG - chr1_3:30440324-30440343 Msa0114060:intron 50.0%
CTGCAGTGAAGGCTAACCAA+AGG + chr1_3:30440343-30440362 None:intergenic 50.0%
!! TTGTGTTGGCTTTGAGGGGT+TGG - chr1_3:30440378-30440397 Msa0114060:intron 50.0%
GCACTCCTCATCTTACAAGC+CGG - chr1_3:30440455-30440474 Msa0114060:CDS 50.0%
ACAATTAAGGCGACTAGGGG+CGG + chr1_3:30440633-30440652 None:intergenic 50.0%
GCCACAATTAAGGCGACTAG+GGG + chr1_3:30440636-30440655 None:intergenic 50.0%
GGCCACAATTAAGGCGACTA+GGG + chr1_3:30440637-30440656 None:intergenic 50.0%
AGGCCACAATTAAGGCGACT+AGG + chr1_3:30440638-30440657 None:intergenic 50.0%
GTCGCCTTAATTGTGGCCTT+TGG - chr1_3:30440639-30440658 Msa0114060:CDS 50.0%
!! CAACACAGTGAAGGTGTTGG+AGG + chr1_3:30440681-30440700 None:intergenic 50.0%
CTCCAACACCTTCACTGTGT+TGG - chr1_3:30440679-30440698 Msa0114060:intron 50.0%
! AGCCAACACAGTGAAGGTGT+TGG + chr1_3:30440684-30440703 None:intergenic 50.0%
GCACTCCTTACCTTACAAGC+CGG - chr1_3:30440770-30440789 Msa0114060:intron 50.0%
CCAAACTGACCCTCAGTATC+AGG + chr1_3:30440879-30440898 None:intergenic 50.0%
CCTGATACTGAGGGTCAGTT+TGG - chr1_3:30440876-30440895 Msa0114060:intron 50.0%
GCCACAGGAGAAAAAGCTGA+TGG - chr1_3:30441416-30441435 Msa0114060:intron 50.0%
ACCGCAGTTGAAGTTACAGC+AGG - chr1_3:30442259-30442278 Msa0114060:intron 50.0%
GGTATGACATCGGAACTCTG+TGG + chr1_3:30442632-30442651 None:intergenic 50.0%
CTACACTCCAGCATTCAGTC+AGG - chr1_3:30442682-30442701 Msa0114060:CDS 50.0%
! CCAGTTTTGCATGGCTGAGT+TGG + chr1_3:30442844-30442863 None:intergenic 50.0%
CCAACTCAGCCATGCAAAAC+TGG - chr1_3:30442841-30442860 Msa0114060:intron 50.0%
!! CTCTAGCTTTCTTGGGCATG+AGG + chr1_3:30442945-30442964 None:intergenic 50.0%
AAGCTAGAGTGTGACCTGAG+TGG - chr1_3:30442956-30442975 Msa0114060:intron 50.0%
CATGGTGCAAGCAACCTGAT+AGG + chr1_3:30443271-30443290 None:intergenic 50.0%
TCAGACGACCCATCGAATCT+TGG - chr1_3:30443621-30443640 Msa0114060:intron 50.0%
TAGTGCTAAGCATGAGGAGG+AGG + chr1_3:30444106-30444125 None:intergenic 50.0%
CAGTCCAAAAGTGGGTACGA+TGG - chr1_3:30444277-30444296 Msa0114060:intron 50.0%
CAAGGGAATGCTCTTCCAAG+AGG - chr1_3:30444490-30444509 Msa0114060:intron 50.0%
GGTAGCTCGTACCAATGGTT+TGG - chr1_3:30444666-30444685 Msa0114060:intron 50.0%
GCTGGGTACACATTGCCAAA+TGG + chr1_3:30445113-30445132 None:intergenic 50.0%
TCTTGTTACCGAGCAGCAGA+AGG - chr1_3:30445750-30445769 Msa0114060:intron 50.0%
AGCATCAACCTTCTGCTGCT+CGG + chr1_3:30445761-30445780 None:intergenic 50.0%
TGATGCCAATTCCAAGAGGG+AGG - chr1_3:30446381-30446400 Msa0114060:intron 50.0%
GCAAGGCACAAGGCTTTCTT+AGG + chr1_3:30447044-30447063 None:intergenic 50.0%
GACATGACAGGTTCAAACGG+AGG - chr1_3:30447422-30447441 Msa0114060:intron 50.0%
TAGGTCATTCCACATGCAGG+TGG + chr1_3:30447795-30447814 None:intergenic 50.0%
! GTGATGGAAAGTGGGCATGA+TGG + chr1_3:30448401-30448420 None:intergenic 50.0%
! ATGGGCCATTGCTCTAAACC+CGG - chr1_3:30448689-30448708 Msa0114060:intron 50.0%
! GAAAGCCGGGTTTAGAGCAA+TGG + chr1_3:30448697-30448716 None:intergenic 50.0%
ACTGACAACACAGACGGGTA+AGG - chr1_3:30448966-30448985 Msa0114060:intron 50.0%
CAGACGGGTAAGGCAATATC+AGG - chr1_3:30448976-30448995 Msa0114060:intron 50.0%
CGGGTAAGGCAATATCAGGA+CGG - chr1_3:30448980-30448999 Msa0114060:intron 50.0%
GGGTAAGGCAATATCAGGAC+GGG - chr1_3:30448981-30449000 Msa0114060:intron 50.0%
AGGCAATATCAGGACGGGTA+TGG - chr1_3:30448986-30449005 Msa0114060:intron 50.0%
GGCAATATCAGGACGGGTAT+GGG - chr1_3:30448987-30449006 Msa0114060:intron 50.0%
TGACACTCTTGACCTCTTGC+AGG + chr1_3:30449142-30449161 None:intergenic 50.0%
TTCTTGCTCCTGTTTGCAGG+TGG - chr1_3:30449411-30449430 Msa0114060:intron 50.0%
ATCAAACGCCACCTGCAAAC+AGG + chr1_3:30449422-30449441 None:intergenic 50.0%
CGTGATCACCATCCTAAGAG+AGG + chr1_3:30449559-30449578 None:intergenic 50.0%
ATCAAGACGAGGATGGTCCT+CGG - chr1_3:30449588-30449607 Msa0114060:intron 50.0%
TCTACTCTCCCCTCTGGATT+TGG + chr1_3:30449617-30449636 None:intergenic 50.0%
CCACATCCCCAACCAAAATG+TGG + chr1_3:30449946-30449965 None:intergenic 50.0%
!!! CCACATTTTGGTTGGGGATG+TGG - chr1_3:30449943-30449962 Msa0114060:intron 50.0%
TCCATGAAACAGCTATCGGG+AGG - chr1_3:30450045-30450064 Msa0114060:intron 50.0%
! ACCTCCCGATAGCTGTTTCA+TGG + chr1_3:30450049-30450068 None:intergenic 50.0%
TGCCGGATCACATCTCTGTA+TGG + chr1_3:30450106-30450125 None:intergenic 50.0%
CCAACAGCAGTTCTGTACTG+AGG + chr1_3:30450168-30450187 None:intergenic 50.0%
CCTCAGTACAGAACTGCTGT+TGG - chr1_3:30450165-30450184 Msa0114060:intron 50.0%
!! GAGTGTTTGCTATGTCTGCC+AGG + chr1_3:30450833-30450852 None:intergenic 50.0%
TCGGCAACTTTCACTAGCTC+TGG + chr1_3:30450879-30450898 None:intergenic 50.0%
ATAGCTGTCACACCAGCCTA+GGG + chr1_3:30451211-30451230 None:intergenic 50.0%
TAGGGTCTACCCATAGTCCT+TGG - chr1_3:30451413-30451432 Msa0114060:intron 50.0%
! GTGGAATCGTGGATTGAGCT+TGG - chr1_3:30452039-30452058 Msa0114060:intron 50.0%
CATTTAGCAAGGACCATGGG+TGG - chr1_3:30452176-30452195 Msa0114060:intron 50.0%
CCGTGGATCTACGGTTATCA+TGG + chr1_3:30452559-30452578 None:intergenic 50.0%
ACAGACCCAGATATTCTCCG+TGG + chr1_3:30452576-30452595 None:intergenic 50.0%
CTGCGCCACTAACCCTTTCT+AGG - chr1_3:30433241-30433260 Msa0114060:intron 55.0%
CATGCCTATCCTCACTGCGT+AGG + chr1_3:30434830-30434849 None:intergenic 55.0%
CTTCTGTTTCCTACCCAGGC+AGG - chr1_3:30434896-30434915 Msa0114060:intron 55.0%
! TTGATTAGCCCTGCCTGGGT+AGG + chr1_3:30434908-30434927 None:intergenic 55.0%
TTCTCTCTACAGGAAGGGGC+TGG - chr1_3:30434959-30434978 Msa0114060:intron 55.0%
TGGGGAAGAGTCCTCTGCAA+TGG - chr1_3:30435265-30435284 Msa0114060:CDS 55.0%
GGAAGCTCCAACCATTGCAG+AGG + chr1_3:30435279-30435298 None:intergenic 55.0%
GAGGAAGTAGCAAGGCTGCA+AGG + chr1_3:30435553-30435572 None:intergenic 55.0%
TCCGTGCTGCCCAAATCAAG+GGG + chr1_3:30435682-30435701 None:intergenic 55.0%
CTCCGTGCTGCCCAAATCAA+GGG + chr1_3:30435683-30435702 None:intergenic 55.0%
ACTCCGTGCTGCCCAAATCA+AGG + chr1_3:30435684-30435703 None:intergenic 55.0%
! TGATTTGGGCAGCACGGAGT+TGG - chr1_3:30435684-30435703 Msa0114060:CDS 55.0%
GTTGGTTGCAGCAGCTCTAC+TGG - chr1_3:30435702-30435721 Msa0114060:CDS 55.0%
GAGGACACTAAGGGGCTTTG+AGG + chr1_3:30435837-30435856 None:intergenic 55.0%
GAACAGTGAGGCGTGAAGGA+GGG + chr1_3:30435935-30435954 None:intergenic 55.0%
CCAAGTAGGGAGGAACAGTG+AGG + chr1_3:30435947-30435966 None:intergenic 55.0%
CCTCACTGTTCCTCCCTACT+TGG - chr1_3:30435944-30435963 Msa0114060:intron 55.0%
TAGGCCTGGGAACCCAAGTA+GGG + chr1_3:30435960-30435979 None:intergenic 55.0%
ATAGGCCTGGGAACCCAAGT+AGG + chr1_3:30435961-30435980 None:intergenic 55.0%
GTGCACTTACGCAGGACGAT+TGG - chr1_3:30436942-30436961 Msa0114060:intron 55.0%
CAGTCTATGGCACAAGGCCT+TGG + chr1_3:30438300-30438319 None:intergenic 55.0%
! CAAGGCCTTGTGCCATAGAC+TGG - chr1_3:30438298-30438317 Msa0114060:intron 55.0%
!! GGATGGTGGACAATGGCTGA+AGG - chr1_3:30438401-30438420 Msa0114060:intron 55.0%
! CTCTGGAAATAGGCGTGCCA+AGG - chr1_3:30439264-30439283 Msa0114060:CDS 55.0%
GGAAGAGGCTGCAGAACAGT+TGG - chr1_3:30439379-30439398 Msa0114060:intron 55.0%
CTAGGGGCAGACCGCAATTA+AGG + chr1_3:30440305-30440324 None:intergenic 55.0%
GCCCCTAGTCGCCTTAATTG+TGG - chr1_3:30440632-30440651 Msa0114060:CDS 55.0%
!! CTGTGTTGGCTTTAAGGGGG+TGG - chr1_3:30440693-30440712 Msa0114060:intron 55.0%
CTCTGTGGATAAGTGACGCG+AGG + chr1_3:30442617-30442636 None:intergenic 55.0%
GACCTGAGTGGTCTGATAGC+AGG - chr1_3:30442968-30442987 Msa0114060:intron 55.0%
CACCTGCTATCAGACCACTC+AGG + chr1_3:30442973-30442992 None:intergenic 55.0%
AGTGGTCTGATAGCAGGTGC+AGG - chr1_3:30442974-30442993 Msa0114060:intron 55.0%
GTGGTCTGATAGCAGGTGCA+GGG - chr1_3:30442975-30442994 Msa0114060:intron 55.0%
TGGTCTGATAGCAGGTGCAG+GGG - chr1_3:30442976-30442995 Msa0114060:intron 55.0%
GCTAAGCATGAGGAGGAGGT+AGG + chr1_3:30444102-30444121 None:intergenic 55.0%
GCACCCCTCACCTAACAAGT+CGG + chr1_3:30444194-30444213 None:intergenic 55.0%
TGAAGCACGGAAAGCAGAGC+TGG - chr1_3:30446273-30446292 Msa0114060:intron 55.0%
TTGGCTGCAGTCTATGGAGG+AGG - chr1_3:30446671-30446690 Msa0114060:intron 55.0%
! GTCTTGTTGCCACCTGCATG+TGG - chr1_3:30447783-30447802 Msa0114060:intron 55.0%
! GGGTTTAGAGCAATGGCCCA+TGG + chr1_3:30448690-30448709 None:intergenic 55.0%
CCAGAAGTAGCACGAAAGCC+GGG + chr1_3:30448710-30448729 None:intergenic 55.0%
GCCAGAAGTAGCACGAAAGC+CGG + chr1_3:30448711-30448730 None:intergenic 55.0%
TCAAGACGAGGATGGTCCTC+GGG - chr1_3:30449589-30449608 Msa0114060:intron 55.0%
TCCTCGGGAACCAAATCCAG+AGG - chr1_3:30449604-30449623 Msa0114060:intron 55.0%
CCTCGGGAACCAAATCCAGA+GGG - chr1_3:30449605-30449624 Msa0114060:intron 55.0%
CTCGGGAACCAAATCCAGAG+GGG - chr1_3:30449606-30449625 Msa0114060:intron 55.0%
GGGGATGTGGGTTTCTTCAG+TGG - chr1_3:30449956-30449975 Msa0114060:intron 55.0%
CATAGACATGATACGGCGCC+TGG - chr1_3:30450812-30450831 Msa0114060:intron 55.0%
GATAGCTGTCACACCAGCCT+AGG + chr1_3:30451212-30451231 None:intergenic 55.0%
ACAGGAAGGGGCTGGACACT+CGG - chr1_3:30434967-30434986 Msa0114060:intron 60.0%
!! GCCCCTTGATTTGGGCAGCA+CGG - chr1_3:30435678-30435697 Msa0114060:CDS 60.0%
GGAACAGTGAGGCGTGAAGG+AGG + chr1_3:30435936-30435955 None:intergenic 60.0%
GGAGGAACAGTGAGGCGTGA+AGG + chr1_3:30435939-30435958 None:intergenic 60.0%
TCCTCCCTACTTGGGTTCCC+AGG - chr1_3:30435953-30435972 Msa0114060:intron 60.0%
!! TGTGACGGACAGCAGCACCA+TGG + chr1_3:30438461-30438480 None:intergenic 60.0%
GGGGCAGACCGCAATTAAGG+CGG + chr1_3:30440302-30440321 None:intergenic 60.0%
! GGTGTTGGAGGCTGCAGTGA+AGG + chr1_3:30440354-30440373 None:intergenic 60.0%
GTCCACGCATCAGGCCCATT+GGG - chr1_3:30440558-30440577 Msa0114060:intron 60.0%
! TGAAGCGTGAGGGGGTGTGT+TGG - chr1_3:30440586-30440605 Msa0114060:intron 60.0%
! GAAGCGTGAGGGGGTGTGTT+GGG - chr1_3:30440587-30440606 Msa0114060:intron 60.0%
CTAGGGGCGGACCGCAATAA+AGG + chr1_3:30440620-30440639 None:intergenic 60.0%
TCTGATAGCAGGTGCAGGGG+TGG - chr1_3:30442979-30442998 Msa0114060:intron 60.0%
GAACTTGTACAGGGGGGCCA+TGG - chr1_3:30448114-30448133 Msa0114060:intron 60.0%
!! CCCGGCTTTCGTGCTACTTC+TGG - chr1_3:30448707-30448726 Msa0114060:intron 60.0%
! CCCTCTGGATTTGGTTCCCG+AGG + chr1_3:30449608-30449627 None:intergenic 60.0%
GCCTGGGAACCCAAGTAGGG+AGG + chr1_3:30435957-30435976 None:intergenic 65.0%
GGGCTGATCGGGAATTGGCG+AGG + chr1_3:30438787-30438806 None:intergenic 65.0%
TCCCGCATCGTCCACGCATC+AGG - chr1_3:30440549-30440568 Msa0114060:intron 65.0%
GCCTGATGCGTGGACGATGC+GGG + chr1_3:30440553-30440572 None:intergenic 65.0%
GGCCTGATGCGTGGACGATG+CGG + chr1_3:30440554-30440573 None:intergenic 65.0%
CGTCCACGCATCAGGCCCAT+TGG - chr1_3:30440557-30440576 Msa0114060:intron 65.0%
ACGCATCAGGCCCATTGGGC+CGG - chr1_3:30440562-30440581 Msa0114060:intron 65.0%
CACGCTTCAGCCGGCCCAAT+GGG + chr1_3:30440575-30440594 None:intergenic 65.0%
TCACGCTTCAGCCGGCCCAA+TGG + chr1_3:30440576-30440595 None:intergenic 65.0%
ATTGGGCCGGCTGAAGCGTG+AGG - chr1_3:30440575-30440594 Msa0114060:intron 65.0%
TTGGGCCGGCTGAAGCGTGA+GGG - chr1_3:30440576-30440595 Msa0114060:intron 65.0%
ACACCCCCTCACGCTTCAGC+CGG + chr1_3:30440584-30440603 None:intergenic 65.0%
GGGGCGGACCGCAATAAAGG+CGG + chr1_3:30440617-30440636 None:intergenic 65.0%
ACAGGGGGGCCATGGTCATC+TGG - chr1_3:30448122-30448141 Msa0114060:intron 65.0%
GGCCCAATGGGCCTGATGCG+TGG + chr1_3:30440563-30440582 None:intergenic 70.0%
TGGGCCGGCTGAAGCGTGAG+GGG - chr1_3:30440577-30440596 Msa0114060:intron 70.0%
GGGCCGGCTGAAGCGTGAGG+GGG - chr1_3:30440578-30440597 Msa0114060:intron 75.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 30432520 30452786 30432520 ID=Msa0114060;Name=Msa0114060
chr1_3 mRNA 30432520 30452786 30432520 ID=Msa0114060-mRNA-1;Parent=Msa0114060;Name=Msa0114060-mRNA-1;_AED=0.14;_eAED=0.14;_QI=104|0.81|0.82|1|0.81|0.82|28|426|1136
chr1_3 exon 30432520 30432944 30432520 ID=Msa0114060-mRNA-1:exon:10103;Parent=Msa0114060-mRNA-1
chr1_3 exon 30434298 30434489 30434298 ID=Msa0114060-mRNA-1:exon:10102;Parent=Msa0114060-mRNA-1
chr1_3 exon 30435117 30435291 30435117 ID=Msa0114060-mRNA-1:exon:10101;Parent=Msa0114060-mRNA-1
chr1_3 exon 30435651 30435740 30435651 ID=Msa0114060-mRNA-1:exon:10100;Parent=Msa0114060-mRNA-1
chr1_3 exon 30437145 30437291 30437145 ID=Msa0114060-mRNA-1:exon:10099;Parent=Msa0114060-mRNA-1
chr1_3 exon 30437706 30437874 30437706 ID=Msa0114060-mRNA-1:exon:10098;Parent=Msa0114060-mRNA-1
chr1_3 exon 30438474 30438625 30438474 ID=Msa0114060-mRNA-1:exon:10097;Parent=Msa0114060-mRNA-1
chr1_3 exon 30438696 30438766 30438696 ID=Msa0114060-mRNA-1:exon:10096;Parent=Msa0114060-mRNA-1
chr1_3 exon 30438852 30439035 30438852 ID=Msa0114060-mRNA-1:exon:10095;Parent=Msa0114060-mRNA-1
chr1_3 exon 30439115 30439306 30439115 ID=Msa0114060-mRNA-1:exon:10094;Parent=Msa0114060-mRNA-1
chr1_3 exon 30439427 30439576 30439427 ID=Msa0114060-mRNA-1:exon:10093;Parent=Msa0114060-mRNA-1
chr1_3 exon 30440385 30440515 30440385 ID=Msa0114060-mRNA-1:exon:10092;Parent=Msa0114060-mRNA-1
chr1_3 exon 30440600 30440687 30440600 ID=Msa0114060-mRNA-1:exon:10091;Parent=Msa0114060-mRNA-1
chr1_3 exon 30442603 30442804 30442603 ID=Msa0114060-mRNA-1:exon:10090;Parent=Msa0114060-mRNA-1
chr1_3 exon 30443019 30443155 30443019 ID=Msa0114060-mRNA-1:exon:10089;Parent=Msa0114060-mRNA-1
chr1_3 exon 30443498 30443597 30443498 ID=Msa0114060-mRNA-1:exon:10088;Parent=Msa0114060-mRNA-1
chr1_3 exon 30443711 30443883 30443711 ID=Msa0114060-mRNA-1:exon:10087;Parent=Msa0114060-mRNA-1
chr1_3 exon 30445427 30445577 30445427 ID=Msa0114060-mRNA-1:exon:10086;Parent=Msa0114060-mRNA-1
chr1_3 exon 30445805 30445926 30445805 ID=Msa0114060-mRNA-1:exon:10085;Parent=Msa0114060-mRNA-1
chr1_3 exon 30446021 30446266 30446021 ID=Msa0114060-mRNA-1:exon:10084;Parent=Msa0114060-mRNA-1
chr1_3 exon 30447595 30447770 30447595 ID=Msa0114060-mRNA-1:exon:10083;Parent=Msa0114060-mRNA-1
chr1_3 exon 30447891 30447984 30447891 ID=Msa0114060-mRNA-1:exon:10082;Parent=Msa0114060-mRNA-1
chr1_3 exon 30450264 30450335 30450264 ID=Msa0114060-mRNA-1:exon:10081;Parent=Msa0114060-mRNA-1
chr1_3 exon 30450446 30450513 30450446 ID=Msa0114060-mRNA-1:exon:10080;Parent=Msa0114060-mRNA-1
chr1_3 exon 30450646 30450684 30450646 ID=Msa0114060-mRNA-1:exon:10079;Parent=Msa0114060-mRNA-1
chr1_3 exon 30451747 30451822 30451747 ID=Msa0114060-mRNA-1:exon:10078;Parent=Msa0114060-mRNA-1
chr1_3 exon 30452240 30452283 30452240 ID=Msa0114060-mRNA-1:exon:10077;Parent=Msa0114060-mRNA-1
chr1_3 exon 30452712 30452786 30452712 ID=Msa0114060-mRNA-1:exon:10076;Parent=Msa0114060-mRNA-1
chr1_3 five_prime_UTR 30452712 30452786 30452712 ID=Msa0114060-mRNA-1:five_prime_utr;Parent=Msa0114060-mRNA-1
chr1_3 five_prime_UTR 30452255 30452283 30452255 ID=Msa0114060-mRNA-1:five_prime_utr;Parent=Msa0114060-mRNA-1
chr1_3 CDS 30452240 30452254 30452240 ID=Msa0114060-mRNA-1:cds;Parent=Msa0114060-mRNA-1
chr1_3 CDS 30451747 30451822 30451747 ID=Msa0114060-mRNA-1:cds;Parent=Msa0114060-mRNA-1
chr1_3 CDS 30450646 30450684 30450646 ID=Msa0114060-mRNA-1:cds;Parent=Msa0114060-mRNA-1
chr1_3 CDS 30450446 30450513 30450446 ID=Msa0114060-mRNA-1:cds;Parent=Msa0114060-mRNA-1
chr1_3 CDS 30450264 30450335 30450264 ID=Msa0114060-mRNA-1:cds;Parent=Msa0114060-mRNA-1
chr1_3 CDS 30447891 30447984 30447891 ID=Msa0114060-mRNA-1:cds;Parent=Msa0114060-mRNA-1
chr1_3 CDS 30447595 30447770 30447595 ID=Msa0114060-mRNA-1:cds;Parent=Msa0114060-mRNA-1
chr1_3 CDS 30446021 30446266 30446021 ID=Msa0114060-mRNA-1:cds;Parent=Msa0114060-mRNA-1
chr1_3 CDS 30445805 30445926 30445805 ID=Msa0114060-mRNA-1:cds;Parent=Msa0114060-mRNA-1
chr1_3 CDS 30445427 30445577 30445427 ID=Msa0114060-mRNA-1:cds;Parent=Msa0114060-mRNA-1
chr1_3 CDS 30443711 30443883 30443711 ID=Msa0114060-mRNA-1:cds;Parent=Msa0114060-mRNA-1
chr1_3 CDS 30443498 30443597 30443498 ID=Msa0114060-mRNA-1:cds;Parent=Msa0114060-mRNA-1
chr1_3 CDS 30443019 30443155 30443019 ID=Msa0114060-mRNA-1:cds;Parent=Msa0114060-mRNA-1
chr1_3 CDS 30442603 30442804 30442603 ID=Msa0114060-mRNA-1:cds;Parent=Msa0114060-mRNA-1
chr1_3 CDS 30440600 30440687 30440600 ID=Msa0114060-mRNA-1:cds;Parent=Msa0114060-mRNA-1
chr1_3 CDS 30440385 30440515 30440385 ID=Msa0114060-mRNA-1:cds;Parent=Msa0114060-mRNA-1
chr1_3 CDS 30439427 30439576 30439427 ID=Msa0114060-mRNA-1:cds;Parent=Msa0114060-mRNA-1
chr1_3 CDS 30439115 30439306 30439115 ID=Msa0114060-mRNA-1:cds;Parent=Msa0114060-mRNA-1
chr1_3 CDS 30438852 30439035 30438852 ID=Msa0114060-mRNA-1:cds;Parent=Msa0114060-mRNA-1
chr1_3 CDS 30438696 30438766 30438696 ID=Msa0114060-mRNA-1:cds;Parent=Msa0114060-mRNA-1
chr1_3 CDS 30438474 30438625 30438474 ID=Msa0114060-mRNA-1:cds;Parent=Msa0114060-mRNA-1
chr1_3 CDS 30437706 30437874 30437706 ID=Msa0114060-mRNA-1:cds;Parent=Msa0114060-mRNA-1
chr1_3 CDS 30437145 30437291 30437145 ID=Msa0114060-mRNA-1:cds;Parent=Msa0114060-mRNA-1
chr1_3 CDS 30435651 30435740 30435651 ID=Msa0114060-mRNA-1:cds;Parent=Msa0114060-mRNA-1
chr1_3 CDS 30435117 30435291 30435117 ID=Msa0114060-mRNA-1:cds;Parent=Msa0114060-mRNA-1
chr1_3 CDS 30434299 30434489 30434299 ID=Msa0114060-mRNA-1:cds;Parent=Msa0114060-mRNA-1
chr1_3 three_prime_UTR 30434298 30434298 30434298 ID=Msa0114060-mRNA-1:three_prime_utr;Parent=Msa0114060-mRNA-1
chr1_3 three_prime_UTR 30432520 30432944 30432520 ID=Msa0114060-mRNA-1:three_prime_utr;Parent=Msa0114060-mRNA-1
Gene Sequence

>Msa0114060

ATGTTCATTAAGCAGGTTGTCATTGAAGGTTTCAAGAGTTATCGAGAGCAAATTGCCACAGAGGATTTCAGTCCTAGAGTTAACTGTGTTGTTGGTGCTAATGGATCTGGTAAAACAAACTTTTTCCATGCCATTCGTTTTGTGTTAAGTGATCTCTTTCAAAACCTACGCAGTGAGGATAGGCATGCACTACTCCATGAAGGGGCTGGACACTCGGTTTTATCTGCATTTGTGGAGATTGTGTTTGATAATTCAGACAATCGTATCCCGATAGCATCCCTAACCTTGATGAAAGACTCCGAGCGATTGGATTTACTGAAGGAAATAGGTGGTACTAGAGTTTATGAGGAGAGGCGCCGTGAAAGTAACAAAAGAAAACAAATTATCCAAGTTGTACAGTATTTAGACGAGAGGTTGAAGGAACTAGACGAGGAGAAAGAGGAACTTAGAAAATATCAGCACCTTGACAAGCAGAGAAAATCCTTGGAATATGCCATATTTAGCAAAGAAGTTCAAGATGCTCAACAAAAGCTTGCAGAGATAGAACAAGCTCGGAACAAGGTCTCTGAAATATCCGCAAAGAAGTATAATGAGGTTCTTGATGCACAAGAGAAATCCAAAGATTTGGAGAATAATTTGAAAGATATAACTAAGGAACATCAAAACCTTATCAAAGAAAAAGAAGTTCTTGAAAAGAAACGAACAACAGCATTAAAGAAGCGCACAGAGCTTGAGCTTGATGTCAAAGACTTACAAGGGAAGATCTCTGGAAATAGGCGTGCCAAGGAAGAGGCTGCAGAACAGTTGGCGATACTTGAGAATAAAATACAAGGCTCGATGGATGAACTGAACAACATTAGTCCTTTATATGATAATCTAGTTCAGAAAGAAAAAGACATTACCAAGGGAATAATGGAACGCGAGAAGAAACTCAGTATACTTTATCAAAAGCAAGGACGCGCAACACAGTTTTCAAGTAAAGCTGCTCGTGATAAGTGGCTTCAAAAGGAGATTGATGATCTTGAACGTGTGCTTTCATCAAACATAACACAGGCAAGGGAGAAAAAGCTGATGGAAGAAATTCAACGGCTTAATGATGAAATGCGTGGTTGTGATGAGAATATTCAGAGTCGTAAAGCAAATATTACTACTTTGGAATCTCTAATTGCTATGTCACGTGAAAGGTTTAGTGATTATAAAGTAGAAAGAGACAGCCTTCAGGATAAGAAAAAATCCTTATGGAGCAAAGAGAATGAACTTACTGCTGAAATTGATAAATTGAGAGCAGAAGTTGAGAAGGCTGAAAAGAGTCTTGATCATGCGATTCCTGGTGATGTTAGAAGAGGGTTGAATTCAGTTCGGAAGATCTGCAAAACTCAGAACATTTCTGGAGTTCACGGTCCAATTATTGAGTTGCTGAACTGTGATGAAAAGTTTTTCACCGCAGTTGAAGTTACAGCAGGAAACAGCTTATTTCATGTGGTTGTTGAAAATGATGACAAGTCAACTGAGATAATTAAACACCTTAATCAACAAAAAGGTGGGCGTGTTACATTTATTCCACTTAACAGAGTAAATGCTCCTCGCGTCACTTATCCACAGAGTTCCGATGTCATACCTCTTTTAAAGAAATTGAATTTTAAACATGACTACACTCCAGCATTCAGTCAGGTATTTGCTAGAACAGTTATCTGCAAGAATCTGGATGTGGCTTCAAAGGTAGCTCGTACCAATGGTTTGGACTGCATAACACTGGAAGGTGATCAAGTAAGCAAAAAAGGTAGTATGACCGGAGGATTTTATGATCACAGACGATCAAGACTGAAGTTTATGAATACCATTAAGCAGAATGCTGACAGTATCCACATTAAGGAGGAGGAATTGGAGAAAATAGATCAAAAGATTAATGATCTTGTTACCGAGCAGCAGAAGGTTGATGCTCAATGCGCTCATAGTAAATCAGAGATAGAAGAGCTTAAGCGGGACATTGCTAATTCTAATAAACAGAAGCCATTATTTTCTAAAGCACTTGCCAAGAAGGAGAAATCACTTGAAGATGTTCAGAATCAGATTGAACAGCTTAAGGGTAGCATTGCTACGAAAAAAGCTGAGATGGGCACAGAGCTCATTGATCATTTAACACCAGAGGAAAAAAAGCTTTTGTCTGATTTGAACCCTGAAATCAAAGACCTTAAAGAGAAGCTTGTTGCTTGCAAGACTGATCGCATTGAGATTGAAGCACGGAAAGCAGAGCTGGAAACTAATCTAACCACTAATCTTAGGAGAAGAAAACAAGAGCTGGAGGCTGTGATATCATCTGATGATGATGAGTCTATGGTTGCTGATGCCAATTCCAAGAGGGAGGAACTTAATGATGCAAAAGTGTTGGTTGATGATACATTAGATCAGCTTAAAAGAGTTTCTGATAGTATAAATAATCGAAACAAGCAAATTGCAAAGATCAAAGATGAAATTAATAAATTGAAGTCTATGGAGGAGGAGTATAATAGAAGACATCAGGAAGAAGCTAAAGAATTAGAGCAATTGCTGGGTAAAAAAAGTGAATTTGCTGCCAAAGAAGAAAAGTATACCAAGAAAATAAAGGAACTTGGCCCATTGACATCAGATGCTTTTGAGTCGTTCAAACGGAGGAGTATTAAAGATTTGCAAAAAATGCTGCACAGGTGCAATGATGAATTGCAACAGTTTAGTCATGTCAACAAGAAAGCACTCGATCAGTACATAAATTTTACAGAACAGAGAGAAGAACTTCAGAAAAGACAAGCTGAACTTGATGCAGGAGATGAGAAAATCAGAGAGCTAATATCAAGTCTAGATCAACGGAAGGATGAATCAATAGAGCGCACTTTCAAAGGTGTTGCTAGGCATTTCCGAGAAGTATTCTCTGAACTTGTACAGGGGGGCCATGGTCATCTGGTTATGATGAAGAAGAAGGATGGTGATCACGATGATGATGATCAAGACGAGGATGGTCCTCGGGAACCAAATCCAGAGGGGAGAGTAGAAAAGTACATTGGAGTGAAAGTTTCTTTTACTGGACAAGGGGAAACACAGTCCATGAAACAGCTATCGGGAGGTCAAAAAACTGTTGTTGCCCTTACACTTATCTTTGCCATACAGAGATGTGATCCGGCACCCTTTTATCTATTTGACGAGATTGATGCAGCATTGGATCCTCAGTACAGAACTGCTGTTGGAAACATGATACGGCGCCTGGCAGACATAGCAAACACTCAATTTATCACGACAACATTCCGTCCAGAGCTAGTGAAAGTTGCCGACAAGATATATGGAGTGACTCACAAAAACAGGGTCAGCCGTGTTAATGTTATATCCGAAAATGATGCTCTAGAGTTCATTAATCAGGATCAGACACAAAATGCTGAATAA
Protein sequence

>Msa0114060

MFIKQVVIEGFKSYREQIATEDFSPRVNCVVGANGSGKTNFFHAIRFVLSDLFQNLRSEDRHALLHEGAGHSVLSAFVEIVFDNSDNRIPIASLTLMKDSERLDLLKEIGGTRVYEERRRESNKRKQIIQVVQYLDERLKELDEEKEELRKYQHLDKQRKSLEYAIFSKEVQDAQQKLAEIEQARNKVSEISAKKYNEVLDAQEKSKDLENNLKDITKEHQNLIKEKEVLEKKRTTALKKRTELELDVKDLQGKISGNRRAKEEAAEQLAILENKIQGSMDELNNISPLYDNLVQKEKDITKGIMEREKKLSILYQKQGRATQFSSKAARDKWLQKEIDDLERVLSSNITQAREKKLMEEIQRLNDEMRGCDENIQSRKANITTLESLIAMSRERFSDYKVERDSLQDKKKSLWSKENELTAEIDKLRAEVEKAEKSLDHAIPGDVRRGLNSVRKICKTQNISGVHGPIIELLNCDEKFFTAVEVTAGNSLFHVVVENDDKSTEIIKHLNQQKGGRVTFIPLNRVNAPRVTYPQSSDVIPLLKKLNFKHDYTPAFSQVFARTVICKNLDVASKVARTNGLDCITLEGDQVSKKGSMTGGFYDHRRSRLKFMNTIKQNADSIHIKEEELEKIDQKINDLVTEQQKVDAQCAHSKSEIEELKRDIANSNKQKPLFSKALAKKEKSLEDVQNQIEQLKGSIATKKAEMGTELIDHLTPEEKKLLSDLNPEIKDLKEKLVACKTDRIEIEARKAELETNLTTNLRRRKQELEAVISSDDDESMVADANSKREELNDAKVLVDDTLDQLKRVSDSINNRNKQIAKIKDEINKLKSMEEEYNRRHQEEAKELEQLLGKKSEFAAKEEKYTKKIKELGPLTSDAFESFKRRSIKDLQKMLHRCNDELQQFSHVNKKALDQYINFTEQREELQKRQAELDAGDEKIRELISSLDQRKDESIERTFKGVARHFREVFSELVQGGHGHLVMMKKKDGDHDDDDQDEDGPREPNPEGRVEKYIGVKVSFTGQGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAVGNMIRRLADIANTQFITTTFRPELVKVADKIYGVTHKNRVSRVNVISENDALEFINQDQTQNAE*