AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0703770

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0703770 MtrunA17_Chr8g0382131 89.979 958 92 2 1 957 1 955 0.0 1756
Msa0703770 MtrunA17_Chr8g0382131 29.091 220 138 7 751 967 982 1186 2.57e-15 81.3
Msa0703770 MtrunA17_Chr8g0382131 29.798 198 132 3 763 957 1096 1289 2.82e-15 81.3
Msa0703770 MtrunA17_Chr8g0382131 27.411 197 121 6 768 958 883 1063 2.92e-15 81.3
Msa0703770 MtrunA17_Chr3g0079151 76.629 967 223 3 3 967 5 970 0.0 1516
Msa0703770 MtrunA17_Chr3g0079151 28.856 201 122 6 763 957 884 1069 1.34e-16 85.5
Msa0703770 MtrunA17_Chr3g0079151 29.787 188 117 6 768 951 1000 1176 1.32e-13 75.9
Msa0703770 MtrunA17_Chr3g0079151 26.368 201 137 4 763 957 1103 1298 4.41e-13 73.9
Msa0703770 MtrunA17_Chr8g0338441 75.858 961 226 5 1 957 1 959 0.0 1486
Msa0703770 MtrunA17_Chr8g0338441 29.208 202 121 5 763 957 881 1067 3.15e-18 90.9
Msa0703770 MtrunA17_Chr8g0338441 29.630 189 122 5 768 954 998 1177 4.25e-16 84.0
Msa0703770 MtrunA17_Chr8g0338441 26.768 198 133 5 763 957 1101 1289 9.78e-13 72.8
Msa0703770 MtrunA17_Chr8g0338311 75.155 966 225 8 1 957 4 963 0.0 1448
Msa0703770 MtrunA17_Chr8g0338311 31.220 205 124 7 751 954 990 1178 3.80e-18 90.5
Msa0703770 MtrunA17_Chr8g0338311 29.592 196 127 5 763 957 886 1071 1.43e-17 88.6
Msa0703770 MtrunA17_Chr8g0338311 27.041 196 132 5 763 957 1105 1290 3.78e-13 74.3
Msa0703770 MtrunA17_Chr2g0311121 69.498 977 251 13 1 958 1 949 0.0 1303
Msa0703770 MtrunA17_Chr2g0311121 29.146 199 132 4 763 959 982 1173 5.03e-14 77.0
Msa0703770 MtrunA17_Chr2g0311121 26.667 240 155 7 722 954 833 1058 7.06e-14 76.6
Msa0703770 MtrunA17_Chr8g0338331 69.934 908 264 6 54 957 13 915 0.0 1260
Msa0703770 MtrunA17_Chr8g0338331 30.693 202 119 7 763 957 836 1023 5.51e-17 86.7
Msa0703770 MtrunA17_Chr8g0338331 30.688 189 120 5 768 954 954 1133 4.48e-16 83.6
Msa0703770 MtrunA17_Chr8g0338331 27.468 233 152 5 727 957 1028 1245 3.55e-15 80.9
Msa0703770 MtrunA17_Chr8g0338301 85.795 528 73 2 49 574 1 528 0.0 926
Msa0703770 MtrunA17_Chr6g0454611 66.984 630 159 8 330 957 1 583 0.0 828
Msa0703770 MtrunA17_Chr6g0454611 29.384 211 117 7 763 957 506 700 2.58e-16 84.3
Msa0703770 MtrunA17_Chr8g0338291 73.529 238 39 1 698 935 1 214 2.35e-111 354
Msa0703770 MtrunA17_Chr8g0338291 30.653 199 129 4 763 957 301 494 6.86e-16 82.0
Msa0703770 MtrunA17_Chr8g0338291 25.877 228 130 6 758 954 158 377 2.61e-14 77.0
Msa0703770 MtrunA17_Chr6g0454601 75.431 232 55 2 49 279 1 231 8.16e-109 336
Msa0703770 MtrunA17_Chr8g0378271 30.063 479 260 17 8 455 1144 1578 1.95e-42 169
Msa0703770 MtrunA17_Chr8g0338341 72.222 54 14 1 1 53 4 57 1.14e-17 80.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0703770 AT3G48770.1 57.351 959 394 7 3 957 195 1142 0.0 1112
Msa0703770 AT3G48770.1 32.161 199 121 6 766 959 1179 1368 6.76e-17 87.0
Msa0703770 AT3G48770.1 28.218 202 129 6 763 958 1285 1476 6.17e-13 73.9
Msa0703770 AT3G48770.2 57.351 959 394 7 3 957 195 1142 0.0 1112
Msa0703770 AT3G48770.2 32.161 199 121 6 766 959 1179 1368 6.76e-17 87.0
Msa0703770 AT3G48770.2 28.218 202 129 6 763 958 1285 1476 6.17e-13 73.9
Msa0703770 AT3G28020.1 40.741 270 97 7 155 423 36 243 4.72e-50 177
Msa0703770 AT4G13750.1 33.333 393 195 16 8 376 1162 1511 7.45e-37 152

Find 223 sgRNAs with CRISPR-Local

Find 395 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGTGTTCCAACAGCCTTTA+TGG 0.144540 4_4:+75803210 Msa0703770:CDS
CATATGGACTCGATGTTATT+TGG 0.150304 4_4:-75802041 None:intergenic
CGGATTCAAGAGTGTGTTTC+TGG 0.154146 4_4:+75802496 Msa0703770:CDS
TTTATTGATCAATCTTATTT+TGG 0.169239 4_4:+75804969 Msa0703770:CDS
CATATATCTCCTCCAAATTC+TGG 0.199713 4_4:+75804378 Msa0703770:CDS
AACTGGTCTTCAATATTTAA+AGG 0.208605 4_4:+75803697 Msa0703770:CDS
GCCCATTTGCTCACATTTGC+AGG 0.230967 4_4:-75804204 None:intergenic
GGCTTCTCCTCAACCCATTC+AGG 0.234048 4_4:-75802608 None:intergenic
AAATAAGATTGATCAATAAA+AGG 0.238207 4_4:-75804966 None:intergenic
CTGATTGATGAGAGCTTCTA+TGG 0.243280 4_4:+75804636 Msa0703770:CDS
TTTCCTGATGGAACTGATTC+AGG 0.243380 4_4:+75800669 Msa0703770:CDS
ATGCCACTTGTTGACAACTA+TGG 0.253963 4_4:+75804147 Msa0703770:CDS
TCTTATGCAGGCCAATTTAC+AGG 0.257247 4_4:+75804300 Msa0703770:CDS
ACGGCTGAAAACCCAGAATT+TGG 0.261747 4_4:-75804390 None:intergenic
ATTCCATCAAAGTTTGTTTC+TGG 0.261848 4_4:-75803951 None:intergenic
CAATTCTCTTGGATAATAAA+TGG 0.271572 4_4:+75803170 Msa0703770:CDS
GTAAGAAACAAAAGAACTTC+TGG 0.271766 4_4:-75802752 None:intergenic
GCAGGCCAATTTACAGGTTC+CGG 0.271998 4_4:+75804306 Msa0703770:CDS
GTCAGTCTAATGCTTGTTCT+TGG 0.275029 4_4:+75803842 Msa0703770:CDS
TTGATAAAATATGTCGCTTC+TGG 0.282572 4_4:+75803742 Msa0703770:CDS
GTCAAAATATTCCAGAATTC+AGG 0.286034 4_4:-75803451 None:intergenic
CTGCATAAGATGAGGAATTT+AGG 0.289962 4_4:-75804287 None:intergenic
GTAGGCTGCTGCCTGAATTC+TGG 0.298736 4_4:+75803440 Msa0703770:CDS
TGATGAGGCAAGGACAAAAT+TGG 0.303499 4_4:-75803140 None:intergenic
CTTGTTCTTGGTTGATCAAT+TGG 0.308181 4_4:+75803854 Msa0703770:CDS
GCTTCCCGGAACCTGTAAAT+TGG 0.312199 4_4:-75804311 None:intergenic
AGACCAGAAACAAACTTTGA+TGG 0.324687 4_4:+75803948 Msa0703770:CDS
TAAAGACATCTTTGGGTCTA+AGG 0.327673 4_4:+75804880 Msa0703770:CDS
ACACAGTGAAGACTCCTTCT+TGG 0.331410 4_4:-75800441 None:intergenic
ATCTCTTCAACGTGTTCTTT+TGG 0.340965 4_4:-75800541 None:intergenic
CATGTGGAAGCAAAAGTTTC+CGG 0.342746 4_4:+75802955 Msa0703770:CDS
CACTCCTTCGCCCCGGGCTT+CGG 0.349965 4_4:-75803473 None:intergenic
CTTGAACATGCGAACCAAAC+TGG 0.352271 4_4:-75803278 None:intergenic
CCTTGTCCACATTGCAGTCT+TGG 0.356946 4_4:+75802575 Msa0703770:CDS
CATAGAAGCTCTCATCAATC+AGG 0.360873 4_4:-75804635 None:intergenic
CTCAAATGGAGAACTTTCAA+TGG 0.364795 4_4:-75803308 None:intergenic
CTGTGAAGTCTCTCCTGATT+TGG 0.367418 4_4:-75803043 None:intergenic
TTGACAGGGTTGACCTTATC+CGG 0.368387 4_4:-75802707 None:intergenic
CTTGAAAGCTGCTGTTTGAC+AGG 0.370753 4_4:-75802722 None:intergenic
TTCTTAATTCGATCGCCATT+GGG 0.373994 4_4:+75804573 Msa0703770:CDS
TCTTTCCTCCATGCAGTTGT+GGG 0.376775 4_4:-75806530 Msa0703780:intron
ACTTGATTGTTTCTAATCCT+TGG 0.377953 4_4:+75804229 Msa0703770:CDS
AATCCAATCCAAAAGCAAAA+AGG 0.378620 4_4:-75804439 None:intergenic
GAGGAAATTAATAAGCTTCC+CGG 0.383098 4_4:-75804325 None:intergenic
GTTGACATAAAGCAGATATA+TGG 0.387873 4_4:+75802638 Msa0703770:CDS
ATTTCCTCACAACTCATGTT+GGG 0.388747 4_4:+75804340 Msa0703770:CDS
CTCTTTCCTCCATGCAGTTG+TGG 0.391576 4_4:-75806531 Msa0703780:intron
AGATCCTCCGTCAAAGGATT+AGG 0.396867 4_4:-75800595 None:intergenic
ACCTTGGCTAAAGACATCTT+TGG 0.400370 4_4:+75804872 Msa0703770:CDS
CAGGCCAATTTACAGGTTCC+GGG 0.401530 4_4:+75804307 Msa0703770:CDS
GGCAAGACAATTGTTGTAGT+TGG 0.402161 4_4:-75802677 None:intergenic
GAGGAAGCATGCAGTTTCAT+TGG 0.409025 4_4:+75804717 Msa0703770:CDS
GCATTCAAAACACTTGTTGT+AGG 0.419093 4_4:+75803235 Msa0703770:CDS
GTTCTTAATTCGATCGCCAT+TGG 0.419488 4_4:+75804572 Msa0703770:CDS
GTTGACCTTATCCGGCTTCA+AGG 0.419729 4_4:-75802699 None:intergenic
AATTTGCATGTGCAGGAAAC+CGG 0.424026 4_4:+75803884 Msa0703770:CDS
ACTGCATGCTTCCTCACAAC+TGG 0.429103 4_4:-75804709 None:intergenic
ATATATCTCCTCCAAATTCT+GGG 0.429424 4_4:+75804379 Msa0703770:CDS
TGATCGTCCAACACCGCATA+TGG 0.432526 4_4:-75802057 None:intergenic
ATGCGAACCAAACTGGATAC+TGG 0.436241 4_4:-75803271 None:intergenic
GACACTGGCCTTGCCAAATC+AGG 0.437589 4_4:+75803030 Msa0703770:CDS
CTTAACCTATCTTCTCATGA+TGG 0.437612 4_4:+75803502 Msa0703770:CDS
TTGGATATATAGTTCCTGAA+TGG 0.438129 4_4:+75802594 Msa0703770:CDS
CTTGCCCTTGAAGCCGGATA+AGG 0.438602 4_4:+75802694 Msa0703770:CDS
CCTTGGCTAAAGACATCTTT+GGG 0.438824 4_4:+75804873 Msa0703770:CDS
AATAAGATTGATCAATAAAA+GGG 0.440080 4_4:-75804965 None:intergenic
TGCTTTATGTCAACAAGGGT+TGG 0.441323 4_4:-75802629 None:intergenic
GGATCAGTATTGCATGATTC+CGG 0.441769 4_4:+75804912 Msa0703770:CDS
ACGTAATTAAACTTCTCAAA+TGG 0.442198 4_4:-75803322 None:intergenic
CGAATTAAGAACGACTTTGA+AGG 0.445788 4_4:-75804561 None:intergenic
GAAGAACAGATGTGGAAGAA+TGG 0.447503 4_4:+75803002 Msa0703770:CDS
TGCTCTGTGTACGTCTCAAT+AGG 0.449548 4_4:-75803388 None:intergenic
TGCCTGCAAATGTGAGCAAA+TGG 0.454255 4_4:+75804202 Msa0703770:CDS
TTAAATCAGTGAATGTTGAT+TGG 0.456529 4_4:+75803590 Msa0703770:CDS
AACAAGGAATTTGCATGTGC+AGG 0.458682 4_4:+75803877 Msa0703770:CDS
CACAGGGGTAAAAGCTCACC+AGG 0.460066 4_4:+75803061 Msa0703770:CDS
TCAAGCTCCAGTATCCAGTT+TGG 0.461781 4_4:+75803264 Msa0703770:CDS
TGGCTTAAAGTTACCGTCAA+TGG 0.462762 4_4:+75804528 Msa0703770:CDS
TCAAATGGAGAACTTTCAAT+GGG 0.465796 4_4:-75803307 None:intergenic
AAGAACAGATGTGGAAGAAT+GGG 0.466689 4_4:+75803003 Msa0703770:CDS
TTAGCAATGGATATCAGATA+AGG 0.469431 4_4:+75802540 Msa0703770:CDS
AGCATTCTCTTCTTCACTCC+TGG 0.470195 4_4:+75800483 Msa0703770:five_prime_UTR
AGAGAAGTTAATGAAAATCC+TGG 0.475479 4_4:+75802797 Msa0703770:CDS
TGGATATATAGTTCCTGAAT+GGG 0.476182 4_4:+75802595 Msa0703770:CDS
ATAAGCCTGGTGAAGTTAGT+AGG 0.479139 4_4:+75803422 Msa0703770:CDS
TATGCCTGAAAGCACACAAA+AGG 0.479928 4_4:+75803912 Msa0703770:CDS
ATCAAGGGAGACAATTCTCT+TGG 0.486296 4_4:+75803159 Msa0703770:CDS
TCCTCCCATCATGAGAAGAT+AGG 0.486346 4_4:-75803507 None:intergenic
AAGTTACCGTCAATGGATAC+AGG 0.486746 4_4:+75804535 Msa0703770:CDS
GATCAACAAAGAAAGGCAAT+AGG 0.488812 4_4:+75802075 Msa0703770:CDS
CTGAGATGCGACTTGCCATC+CGG 0.489733 4_4:-75804931 None:intergenic
AATTGTCTTGCCCTTGAAGC+CGG 0.490156 4_4:+75802688 Msa0703770:CDS
TTAACTTCATCCAATATCTC+AGG 0.492450 4_4:+75804802 Msa0703770:CDS
CATTAACTTCTCTTACAGAA+AGG 0.494102 4_4:-75802787 None:intergenic
AATTTCCTCACAACTCATGT+TGG 0.495542 4_4:+75804339 Msa0703770:CDS
AGAAACAAACTTTGATGGAA+TGG 0.495674 4_4:+75803953 Msa0703770:CDS
CTCGGCGGAGAGATTCTTAA+CGG 0.496567 4_4:-75800626 None:intergenic
AATAGGAGCAGTGGTTACAT+AGG 0.497331 4_4:+75802092 Msa0703770:CDS
TTACAGTTACAGAAGATCAA+TGG 0.504227 4_4:+75800513 Msa0703770:exon
TCTGATGACATTACTGCTAC+TGG 0.509465 4_4:+75801972 Msa0703770:CDS
TGGGAATCCTAATCCTTTGA+CGG 0.509622 4_4:+75800588 Msa0703770:CDS
TGCCACTTGTTGACAACTAT+GGG 0.510885 4_4:+75804148 Msa0703770:CDS
AGTGGTTACATAGGAGAGAA+AGG 0.513870 4_4:+75802101 Msa0703770:CDS
GCAGTTACAGTGCTCTGTCC+AGG 0.514375 4_4:-75802815 None:intergenic
ACTGGATACTGGAGCTTGAT+CGG 0.515987 4_4:-75803260 None:intergenic
GAACACATTCAAGTATCCCT+TGG 0.516265 4_4:-75803195 None:intergenic
CTAAATTCCTCATCTTATGC+AGG 0.516492 4_4:+75804288 Msa0703770:CDS
GAAGAAGAGTTGAAAACTGT+AGG 0.516883 4_4:+75804678 Msa0703770:CDS
CTTTCCTCCATGCAGTTGTG+GGG 0.519234 4_4:-75806529 Msa0703780:intron
CATCCACAAGATTAGAACTC+TGG 0.519704 4_4:-75803627 None:intergenic
TGTTCACAAATTCATCCAAC+GGG 0.521448 4_4:-75804836 None:intergenic
TTGACCGAAGCCCGGGGCGA+AGG 0.521857 4_4:+75803469 Msa0703770:CDS
CAGAAGCACTTCTATAAGCC+TGG 0.523495 4_4:+75803409 Msa0703770:CDS
TTTGGGTCTAAGGTCTCCTG+TGG 0.524841 4_4:+75804890 Msa0703770:CDS
TTAACCTATCTTCTCATGAT+GGG 0.525256 4_4:+75803503 Msa0703770:CDS
GGATTCGGAATCTGAAGCAC+AGG 0.525316 4_4:+75804457 Msa0703770:CDS
AATGCATCCATAAAGGCTGT+TGG 0.526580 4_4:-75803217 None:intergenic
CATCCAGAGTTCTAATCTTG+TGG 0.527876 4_4:+75803624 Msa0703770:CDS
TTGAAAATAAGTAATGTGGC+TGG 0.527999 4_4:-75801999 None:intergenic
GGAAGAATGGGTTGTGACAC+TGG 0.528035 4_4:+75803015 Msa0703770:CDS
ATTACGTTACTTCTCCAAGA+AGG 0.528583 4_4:+75800427 Msa0703770:five_prime_UTR
CCTTTGCACGAAGTTAATCT+CGG 0.528652 4_4:-75802852 None:intergenic
GTACCTGAATCAGTTCCATC+AGG 0.531003 4_4:-75800672 None:intergenic
ATTATTGAAAATAAGTAATG+TGG 0.531522 4_4:-75802003 None:intergenic
CAAGTACACTCCTTCGCCCC+GGG 0.533450 4_4:-75803479 None:intergenic
AATGTATAAAAGATGGCAGC+TGG 0.535839 4_4:+75804508 Msa0703770:CDS
GGAAGCAAAAGTTTCCGGTC+AGG 0.537304 4_4:+75802960 Msa0703770:CDS
ATCGAGTCCATATGCGGTGT+TGG 0.538601 4_4:+75802050 Msa0703770:CDS
TGCATTTCTTCCTACAGAGA+TGG 0.539549 4_4:+75803090 Msa0703770:CDS
ACCACACTTTCTGACCTGAC+CGG 0.545588 4_4:-75802974 None:intergenic
AATGAAAATTATGTTGAGCT+CGG 0.545690 4_4:+75804255 Msa0703770:CDS
CCAAGACTGCAATGTGGACA+AGG 0.545693 4_4:-75802575 None:intergenic
TTTGGTAAGTGGTGTATCAA+CGG 0.546178 4_4:-75804409 None:intergenic
AGGAGGCCTGTATCCATTGA+CGG 0.546253 4_4:-75804541 None:intergenic
CAGAGTTCTAATCTTGTGGA+TGG 0.546719 4_4:+75803628 Msa0703770:CDS
TTGACCTTATCCGGCTTCAA+GGG 0.547830 4_4:-75802698 None:intergenic
TGATTGATGAGAGCTTCTAT+GGG 0.548178 4_4:+75804637 Msa0703770:CDS
CGTGTCACAGAAACAAGAAA+AGG 0.548446 4_4:+75804171 Msa0703770:CDS
GTTTCACTCCCTCGTTGTAG+TGG 0.549208 4_4:-75801926 None:intergenic
CGCCCATAGTTGTCAACAAG+TGG 0.551293 4_4:-75804150 None:intergenic
GCAAGTACACTCCTTCGCCC+CGG 0.552305 4_4:-75803480 None:intergenic
GAATGCACACAGCACTATGC+AGG 0.553612 4_4:+75803790 Msa0703770:CDS
GTTATGACAAACTCCAGTGT+TGG 0.555568 4_4:-75801948 None:intergenic
TATAGTTCCTGAATGGGTTG+AGG 0.559108 4_4:+75802601 Msa0703770:CDS
TTTCCTCACAACTCATGTTG+GGG 0.560061 4_4:+75804341 Msa0703770:CDS
ATGATCTTTACTTAGAGTGA+AGG 0.560606 4_4:-75804766 None:intergenic
GGAAAATAGTAACAATGAGA+AGG 0.560900 4_4:+75802919 Msa0703770:CDS
TGGATAATAAATGGAACCAA+GGG 0.561153 4_4:+75803179 Msa0703770:CDS
AACAGAACTGCAGACGACAT+TGG 0.561429 4_4:-75804022 None:intergenic
AATGAAGTATTTGTCAGAGC+GGG 0.562386 4_4:+75804101 Msa0703770:CDS
TTTGTTTCTGGTCTAAACGT+AGG 0.562465 4_4:-75803939 None:intergenic
TTGAGAAGTTTAATTACGTG+AGG 0.567041 4_4:+75803326 Msa0703770:CDS
ATGGAGAACTTTCAATGGGA+AGG 0.567857 4_4:-75803303 None:intergenic
CCCAAAGATGTCTTTAGCCA+AGG 0.571618 4_4:-75804873 None:intergenic
GCATTCATGAAAACTGAAAG+AGG 0.572108 4_4:-75803773 None:intergenic
GAATTTGGAGGAGATATATG+AGG 0.573317 4_4:-75804375 None:intergenic
GTTGGACGATCAACAAAGAA+AGG 0.574748 4_4:+75802068 Msa0703770:CDS
TTGGATAATAAATGGAACCA+AGG 0.576105 4_4:+75803178 Msa0703770:CDS
CGAAGGACAAAGTTCTCTAT+CGG 0.576706 4_4:+75800565 Msa0703770:CDS
TTGAAAGCTGCTGTTTGACA+GGG 0.577635 4_4:-75802721 None:intergenic
TGGTGAAGATCCTCCGTCAA+AGG 0.577978 4_4:-75800601 None:intergenic
AAAAGATGTTCATTTCCTGA+TGG 0.578740 4_4:+75800657 Msa0703770:CDS
AGGACAAAGTTCTCTATCGG+TGG 0.579395 4_4:+75800568 Msa0703770:CDS
ATAGAAGCTCTCATCAATCA+GGG 0.580805 4_4:-75804634 None:intergenic
TCCGGTCAGGTCAGAAAGTG+TGG 0.580886 4_4:+75802973 Msa0703770:CDS
AAATTAGTGACCATCTCTGT+AGG 0.582428 4_4:-75803100 None:intergenic
GCCTGCAAATGTGAGCAAAT+GGG 0.582565 4_4:+75804203 Msa0703770:CDS
GCTGAAAACCCAGAATTTGG+AGG 0.583530 4_4:-75804387 None:intergenic
CAAATCAGGAGAGACTTCAC+AGG 0.585657 4_4:+75803044 Msa0703770:CDS
TACAAAGCCCCACAACTGCA+TGG 0.586462 4_4:+75806522 Msa0703770:CDS
AATACTTCATTGACAAAGAG+TGG 0.590330 4_4:-75804089 None:intergenic
CTGTTCACAAATTCATCCAA+CGG 0.590693 4_4:-75804837 None:intergenic
TTGTCTCCCTTGATGAGGCA+AGG 0.592393 4_4:-75803150 None:intergenic
TTGGTTGATCAATTGGAACA+AGG 0.592428 4_4:+75803861 Msa0703770:CDS
CTTTGCAAAATATTTCCCAA+TGG 0.595878 4_4:-75804588 None:intergenic
AAGTCTCTCCTGATTTGGCA+AGG 0.599451 4_4:-75803038 None:intergenic
GAAGTATTTGTCAGAGCGGG+AGG 0.599581 4_4:+75804104 Msa0703770:CDS
TTTGTGAACAGCATCAGAGA+TGG 0.600591 4_4:+75804849 Msa0703770:CDS
GGAAGAAATGCATAGACCCC+TGG 0.601342 4_4:-75803079 None:intergenic
CCGAGATTAACTTCGTGCAA+AGG 0.601729 4_4:+75802852 Msa0703770:CDS
TGAGAAGTTTAATTACGTGA+GGG 0.601922 4_4:+75803327 Msa0703770:CDS
TAGAAGCTCTCATCAATCAG+GGG 0.602012 4_4:-75804633 None:intergenic
CGGAGAGATTCTTAACGGCA+TGG 0.607529 4_4:-75800621 None:intergenic
GGACAAAGTTCTCTATCGGT+GGG 0.608517 4_4:+75800569 Msa0703770:CDS
AAATTGGCTTGAATAATGAA+AGG 0.609216 4_4:-75803124 None:intergenic
AGGAATGCAGCTACTACATG+TGG 0.611117 4_4:+75802939 Msa0703770:CDS
AGCAGCCTACTAACTTCACC+AGG 0.611524 4_4:-75803427 None:intergenic
ATATCTGCTTTATGTCAACA+AGG 0.613422 4_4:-75802634 None:intergenic
ACCTATCTTCTCATGATGGG+AGG 0.616829 4_4:+75803506 Msa0703770:CDS
AAGAAAGGCAATAGGAGCAG+TGG 0.621388 4_4:+75802083 Msa0703770:CDS
TCATGCAATACTGATCCCAC+AGG 0.622007 4_4:-75804906 None:intergenic
ATTAAGAACGACTTTGAAGG+AGG 0.622476 4_4:-75804558 None:intergenic
ATAAAGCAGATATATGGTGC+TGG 0.623832 4_4:+75802644 Msa0703770:CDS
ACAGCATCAGAGATGGACCT+TGG 0.626179 4_4:+75804856 Msa0703770:CDS
TTGGGTCTAAGGTCTCCTGT+GGG 0.627221 4_4:+75804891 Msa0703770:CDS
CAGTATTGCATGATTCCGGA+TGG 0.631365 4_4:+75804916 Msa0703770:CDS
TGTAACTGTAATGAAGTACC+AGG 0.632648 4_4:-75800501 None:intergenic
GAAGATAACCACTACAACGA+GGG 0.636772 4_4:+75801918 Msa0703770:CDS
GAGAATTGTCTCCCTTGATG+AGG 0.640110 4_4:-75803155 None:intergenic
GATTCGGAATCTGAAGCACA+GGG 0.645968 4_4:+75804458 Msa0703770:CDS
AAATTATGTTGAGCTCGGAA+AGG 0.647507 4_4:+75804260 Msa0703770:CDS
AACACGTTGAAGAGATACGA+AGG 0.650029 4_4:+75800548 Msa0703770:CDS
CGAGGGAGTGAAACCAACAC+TGG 0.653447 4_4:+75801935 Msa0703770:CDS
GGGGAGTGCACCTGCCAGAG+AGG 0.654797 4_4:+75804478 Msa0703770:CDS
GAATCCTAATCCTTTGACGG+AGG 0.657473 4_4:+75800591 Msa0703770:CDS
TATCTGCTTTATGTCAACAA+GGG 0.658452 4_4:-75802633 None:intergenic
AGAAGCTCTCATCAATCAGG+GGG 0.669488 4_4:-75804632 None:intergenic
AAATTGGCCTGCATAAGATG+AGG 0.673901 4_4:-75804295 None:intergenic
AAGCCCCAACATGAGTTGTG+AGG 0.674441 4_4:-75804344 None:intergenic
AAATCAGGAGAGACTTCACA+GGG 0.675521 4_4:+75803045 Msa0703770:CDS
AATAACATCGAGTCCATATG+CGG 0.692614 4_4:+75802044 Msa0703770:CDS
CAATGAAGTATTTGTCAGAG+CGG 0.694666 4_4:+75804100 Msa0703770:CDS
CAGGGGTAAAAGCTCACCAG+GGG 0.701442 4_4:+75803063 Msa0703770:CDS
AGGAGTGATGTCCAGTTGTG+AGG 0.703015 4_4:+75804698 Msa0703770:CDS
GGTTGAAAGAAGAACAGATG+TGG 0.703800 4_4:+75802994 Msa0703770:CDS
GATTGATGAGAGCTTCTATG+GGG 0.706208 4_4:+75804638 Msa0703770:CDS
ACAGGGGTAAAAGCTCACCA+GGG 0.723015 4_4:+75803062 Msa0703770:CDS
CACACTATATCTCTCCGCAG+AGG 0.734382 4_4:+75802898 Msa0703770:CDS
ATATATCCAAGACTGCAATG+TGG 0.750302 4_4:-75802581 None:intergenic
TGAAGATAACCACTACAACG+AGG 0.755604 4_4:+75801917 Msa0703770:CDS
AAAGCCCCACAACTGCATGG+AGG 0.757856 4_4:+75806525 Msa0703770:CDS
ATTCGGAATCTGAAGCACAG+GGG 0.790178 4_4:+75804459 Msa0703770:CDS
AATCAGGAGAGACTTCACAG+GGG 0.878955 4_4:+75803046 Msa0703770:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAGGAAAAATATTTATTTTT+AGG - chr4_4:75801713-75801732 None:intergenic 10.0%
!! ATTTCAGTTATTTATATATT+AGG + chr4_4:75801761-75801780 Msa0703770:intron 10.0%
!!! TTCAAATACAATTTTTTTTA+GGG - chr4_4:75801853-75801872 None:intergenic 10.0%
!!! ATTCAAATACAATTTTTTTT+AGG - chr4_4:75801854-75801873 None:intergenic 10.0%
!! AAAAAACAGTAAATTTAATT+TGG - chr4_4:75805131-75805150 None:intergenic 10.0%
!! AATAATTTACACTTTAAATT+TGG - chr4_4:75805170-75805189 None:intergenic 10.0%
!! TTTCTTGAATAATATATATT+GGG - chr4_4:75805258-75805277 None:intergenic 10.0%
!!! TTTTCTTGAATAATATATAT+TGG - chr4_4:75805259-75805278 None:intergenic 10.0%
!!! AATAGTATATTTTTGTTTTT+TGG - chr4_4:75805296-75805315 None:intergenic 10.0%
!! AAAACAATTAATGATATTAT+AGG - chr4_4:75805480-75805499 None:intergenic 10.0%
!! TGTATAAATATTTAAAAGAA+CGG - chr4_4:75806075-75806094 None:intergenic 10.0%
!!! ATTTTGTTTAGAATAAAAAT+TGG - chr4_4:75806201-75806220 Msa0703780:three_prime_UTR 10.0%
!! ATACTACTAATAAATAAAAG+AGG - chr4_4:75800720-75800739 None:intergenic 15.0%
!!! TTTACTTTTTTTTTTTTGTG+TGG + chr4_4:75800854-75800873 Msa0703770:intron 15.0%
!!! TTTTCTTTAAAAAAGATGAT+AGG - chr4_4:75800993-75801012 None:intergenic 15.0%
!!! ATCTAAACAATTTTATTACA+GGG - chr4_4:75801101-75801120 None:intergenic 15.0%
!!! AATCTAAACAATTTTATTAC+AGG - chr4_4:75801102-75801121 None:intergenic 15.0%
!!! ATTTGAAGATTTTTTTGTTT+TGG - chr4_4:75801305-75801324 None:intergenic 15.0%
!! AAAAAAATCTTCAAATTACA+AGG + chr4_4:75801309-75801328 Msa0703770:intron 15.0%
!!! TTTTTCCAATAAAATTGATT+TGG - chr4_4:75801528-75801547 None:intergenic 15.0%
!!! CTTTTTATACTACTATTATA+AGG - chr4_4:75801732-75801751 None:intergenic 15.0%
!!! TCAAATACAATTTTTTTTAG+GGG - chr4_4:75801852-75801871 None:intergenic 15.0%
!! ATTATTGAAAATAAGTAATG+TGG - chr4_4:75802006-75802025 None:intergenic 15.0%
!!! ACTTATTTTCAATAATGAAA+AGG + chr4_4:75802010-75802029 Msa0703770:CDS 15.0%
!!! CTTATTTTCAATAATGAAAA+GGG + chr4_4:75802011-75802030 Msa0703770:CDS 15.0%
!!! ATAATGTACTTGATTTTTTA+GGG + chr4_4:75803566-75803585 Msa0703770:CDS 15.0%
!!! TTTTTGAAATGTATAAAAGA+TGG + chr4_4:75804501-75804520 Msa0703770:CDS 15.0%
!! AATAAGATTGATCAATAAAA+GGG - chr4_4:75804968-75804987 None:intergenic 15.0%
!! AAATAAGATTGATCAATAAA+AGG - chr4_4:75804969-75804988 None:intergenic 15.0%
!!! TTTATTGATCAATCTTATTT+TGG + chr4_4:75804969-75804988 Msa0703770:CDS 15.0%
!!! TCAATATGTATCTTTTTTTT+TGG - chr4_4:75805429-75805448 None:intergenic 15.0%
!! AATCTGATAAAAAAATTGTT+TGG + chr4_4:75805825-75805844 Msa0703770:intron 15.0%
!! TTATGCCGTATAAAATAAAT+AGG + chr4_4:75801030-75801049 Msa0703770:intron 20.0%
!! TATGCCGTATAAAATAAATA+GGG + chr4_4:75801031-75801050 Msa0703770:intron 20.0%
!!! TTGACCCTATTTATTTTATA+CGG - chr4_4:75801038-75801057 None:intergenic 20.0%
!!! TCTAAACAATTTTATTACAG+GGG - chr4_4:75801100-75801119 None:intergenic 20.0%
!! AAAATCGATAATATGATAGA+GGG + chr4_4:75801178-75801197 Msa0703770:intron 20.0%
!! GCTTCAAATTACAAAATTTA+AGG - chr4_4:75801273-75801292 None:intergenic 20.0%
!! GTTATTTATATATTAGGTGT+TGG + chr4_4:75801767-75801786 Msa0703770:intron 20.0%
!!! CAAATACAATTTTTTTTAGG+GGG - chr4_4:75801851-75801870 None:intergenic 20.0%
!! GTTGACAACAAAAAAAATTA+TGG - chr4_4:75801884-75801903 None:intergenic 20.0%
!!! TTGTGTTATCATTTTCAATT+TGG - chr4_4:75802436-75802455 None:intergenic 20.0%
!! TATCCATTGCTAAAAATATA+TGG - chr4_4:75802533-75802552 None:intergenic 20.0%
!!! GATAATGTACTTGATTTTTT+AGG + chr4_4:75803565-75803584 Msa0703770:CDS 20.0%
!! TAGCCATTTAAACAAATTAT+TGG + chr4_4:75805324-75805343 Msa0703770:intron 20.0%
!!! CAACCAATAATTTGTTTAAA+TGG - chr4_4:75805330-75805349 None:intergenic 20.0%
!!! GAAGTGATTCATTTTTTTAT+TGG + chr4_4:75805528-75805547 Msa0703770:intron 20.0%
!!! ATCAGATTTTATTTACCTTT+CGG - chr4_4:75805813-75805832 None:intergenic 20.0%
!!! AAAATAGACCATTTTGTAAT+GGG + chr4_4:75806216-75806235 Msa0703770:intron 20.0%
!!! TTTTTGTCTTGTTTTTGTGT+AGG + chr4_4:75800775-75800794 Msa0703770:intron 25.0%
! ATGTAAAAGAAGAATAAGCA+TGG - chr4_4:75800821-75800840 None:intergenic 25.0%
! CCAAAAATCTTCAAATTACA+GGG - chr4_4:75801129-75801148 None:intergenic 25.0%
! ACCAAAAATCTTCAAATTAC+AGG - chr4_4:75801130-75801149 None:intergenic 25.0%
! CAAAATCGATAATATGATAG+AGG + chr4_4:75801177-75801196 Msa0703770:intron 25.0%
! TGAAATTCTCTCAAATTACA+GGG + chr4_4:75801237-75801256 Msa0703770:intron 25.0%
!!! TTTTTTGTTTTGGACTTTCA+TGG - chr4_4:75801295-75801314 None:intergenic 25.0%
!! GAAGTCCAAATCAATTTTAT+TGG + chr4_4:75801520-75801539 Msa0703770:intron 25.0%
!! AAACACATTAGCAATTTTTG+AGG - chr4_4:75801578-75801597 None:intergenic 25.0%
! TCTTAAAATGTTGTGTACTT+TGG + chr4_4:75802151-75802170 Msa0703770:intron 25.0%
! TTTATATCACTCGATTAACA+AGG - chr4_4:75802373-75802392 None:intergenic 25.0%
!!! TTTCAATTTGGCTACTTTTA+TGG - chr4_4:75802424-75802443 None:intergenic 25.0%
!!! CAACCATATATTTTTAGCAA+TGG + chr4_4:75802527-75802546 Msa0703770:CDS 25.0%
!!! AAATTGGCTTGAATAATGAA+AGG - chr4_4:75803127-75803146 None:intergenic 25.0%
! CAATTCTCTTGGATAATAAA+TGG + chr4_4:75803170-75803189 Msa0703770:CDS 25.0%
! ACGTAATTAAACTTCTCAAA+TGG - chr4_4:75803325-75803344 None:intergenic 25.0%
! GGACAAAATCAAAGAAAAAT+TGG + chr4_4:75803348-75803367 Msa0703770:CDS 25.0%
! TTAAATCAGTGAATGTTGAT+TGG + chr4_4:75803590-75803609 Msa0703770:CDS 25.0%
!!! AACTGGTCTTCAATATTTAA+AGG + chr4_4:75803697-75803716 Msa0703770:CDS 25.0%
! AATGAAAATTATGTTGAGCT+CGG + chr4_4:75804255-75804274 Msa0703770:CDS 25.0%
!! CTATTTTACTATTTGTCTTG+AGG + chr4_4:75805358-75805377 Msa0703770:intron 25.0%
!!! AAAGACAAATGTTTTGAACA+TGG - chr4_4:75805641-75805660 None:intergenic 25.0%
! AAATATACTGGATACTACAA+TGG - chr4_4:75805710-75805729 None:intergenic 25.0%
! TTCTCTTGAACAAAATATAC+TGG - chr4_4:75805722-75805741 None:intergenic 25.0%
! TCATTTGAACAATTCATTCT+TGG + chr4_4:75805868-75805887 Msa0703770:intron 25.0%
!! TTTTTCACATACAAATAGCA+AGG + chr4_4:75805980-75805999 Msa0703770:intron 25.0%
! TGCATACTTAAAGAAAATGA+AGG - chr4_4:75806163-75806182 None:intergenic 25.0%
!! CAAAATAGACCATTTTGTAA+TGG + chr4_4:75806215-75806234 Msa0703770:intron 25.0%
! ATATTTACAAGCATGTTACA+TGG + chr4_4:75806272-75806291 Msa0703770:intron 25.0%
TTACAGTTACAGAAGATCAA+TGG + chr4_4:75800513-75800532 Msa0703770:exon 30.0%
! AACATCTTTTGCATAAAGCT+CGG - chr4_4:75800647-75800666 None:intergenic 30.0%
AAAAGATGTTCATTTCCTGA+TGG + chr4_4:75800657-75800676 Msa0703770:CDS 30.0%
TAAAAGAGGTGAAACAGAAA+AGG - chr4_4:75800706-75800725 None:intergenic 30.0%
ATACGGCATAATAAGATGAT+AGG - chr4_4:75801021-75801040 None:intergenic 30.0%
! ATTTTATTACAGGGGTAAAC+CGG - chr4_4:75801092-75801111 None:intergenic 30.0%
! CCCTGTAATTTGAAGATTTT+TGG + chr4_4:75801126-75801145 Msa0703770:intron 30.0%
AAACCGAAATATCCATGATA+TGG + chr4_4:75801202-75801221 Msa0703770:intron 30.0%
CTGAAATTCTCTCAAATTAC+AGG + chr4_4:75801236-75801255 Msa0703770:intron 30.0%
GAAATTCTCTCAAATTACAG+GGG + chr4_4:75801238-75801257 Msa0703770:intron 30.0%
AAATTCTCTCAAATTACAGG+GGG + chr4_4:75801239-75801258 Msa0703770:intron 30.0%
!!! TTTGTAGGTTTTGACTACAA+AGG - chr4_4:75801473-75801492 None:intergenic 30.0%
AACTTGAAGCTAGAATTTGT+AGG - chr4_4:75801488-75801507 None:intergenic 30.0%
GATACATTAACAATAGAGAC+CGG - chr4_4:75801647-75801666 None:intergenic 30.0%
TTGAAAATAAGTAATGTGGC+TGG - chr4_4:75802002-75802021 None:intergenic 30.0%
! ATAGTCAACTATCTCTCTTT+TGG + chr4_4:75802343-75802362 Msa0703770:intron 30.0%
TATAAAACCATGCTTGACTA+TGG + chr4_4:75802387-75802406 Msa0703770:intron 30.0%
GTTTGACAAAATCTCTCTTA+TGG + chr4_4:75802458-75802477 Msa0703770:intron 30.0%
TATGGTTGAATTTCAGGAAT+CGG + chr4_4:75802476-75802495 Msa0703770:intron 30.0%
TTAGCAATGGATATCAGATA+AGG + chr4_4:75802540-75802559 Msa0703770:CDS 30.0%
TTGGATATATAGTTCCTGAA+TGG + chr4_4:75802594-75802613 Msa0703770:CDS 30.0%
TGGATATATAGTTCCTGAAT+GGG + chr4_4:75802595-75802614 Msa0703770:CDS 30.0%
TATCTGCTTTATGTCAACAA+GGG - chr4_4:75802636-75802655 None:intergenic 30.0%
ATATCTGCTTTATGTCAACA+AGG - chr4_4:75802637-75802656 None:intergenic 30.0%
GTTGACATAAAGCAGATATA+TGG + chr4_4:75802638-75802657 Msa0703770:CDS 30.0%
GTAAGAAACAAAAGAACTTC+TGG - chr4_4:75802755-75802774 None:intergenic 30.0%
CATTAACTTCTCTTACAGAA+AGG - chr4_4:75802790-75802809 None:intergenic 30.0%
AGAGAAGTTAATGAAAATCC+TGG + chr4_4:75802797-75802816 Msa0703770:CDS 30.0%
! ATTGTTACTATTTTCCTCTG+CGG - chr4_4:75802915-75802934 None:intergenic 30.0%
GGAAAATAGTAACAATGAGA+AGG + chr4_4:75802919-75802938 Msa0703770:CDS 30.0%
TTGGATAATAAATGGAACCA+AGG + chr4_4:75803178-75803197 Msa0703770:CDS 30.0%
TGGATAATAAATGGAACCAA+GGG + chr4_4:75803179-75803198 Msa0703770:CDS 30.0%
!! TGTTTTGAATGCATCCATAA+AGG - chr4_4:75803227-75803246 None:intergenic 30.0%
TCAAATGGAGAACTTTCAAT+GGG - chr4_4:75803310-75803329 None:intergenic 30.0%
TTGAGAAGTTTAATTACGTG+AGG + chr4_4:75803326-75803345 Msa0703770:CDS 30.0%
TGAGAAGTTTAATTACGTGA+GGG + chr4_4:75803327-75803346 Msa0703770:CDS 30.0%
GTCAAAATATTCCAGAATTC+AGG - chr4_4:75803454-75803473 None:intergenic 30.0%
TTAACCTATCTTCTCATGAT+GGG + chr4_4:75803503-75803522 Msa0703770:CDS 30.0%
! TGCTGTTTATTGCTAAAAAC+TGG + chr4_4:75803680-75803699 Msa0703770:CDS 30.0%
! GAAGCGACATATTTTATCAA+TGG - chr4_4:75803742-75803761 None:intergenic 30.0%
! TTGATAAAATATGTCGCTTC+TGG + chr4_4:75803742-75803761 Msa0703770:CDS 30.0%
! ATTCCATCAAAGTTTGTTTC+TGG - chr4_4:75803954-75803973 None:intergenic 30.0%
AGAAACAAACTTTGATGGAA+TGG + chr4_4:75803953-75803972 Msa0703770:CDS 30.0%
AATACTTCATTGACAAAGAG+TGG - chr4_4:75804092-75804111 None:intergenic 30.0%
!! ACTTGATTGTTTCTAATCCT+TGG + chr4_4:75804229-75804248 Msa0703770:CDS 30.0%
! ACATAATTTTCATTGCTCCA+AGG - chr4_4:75804249-75804268 None:intergenic 30.0%
ATATATCTCCTCCAAATTCT+GGG + chr4_4:75804379-75804398 Msa0703770:CDS 30.0%
!!! AAGCAAAAAGGCATTTTCTT+TGG - chr4_4:75804430-75804449 None:intergenic 30.0%
! AGAAAATGCCTTTTTGCTTT+TGG + chr4_4:75804431-75804450 Msa0703770:CDS 30.0%
AATCCAATCCAAAAGCAAAA+AGG - chr4_4:75804442-75804461 None:intergenic 30.0%
!! TTTTGCTTTTGGATTGGATT+CGG + chr4_4:75804442-75804461 Msa0703770:CDS 30.0%
ATACATTTCAAAAACCTCTC+TGG - chr4_4:75804495-75804514 None:intergenic 30.0%
CTTTGCAAAATATTTCCCAA+TGG - chr4_4:75804591-75804610 None:intergenic 30.0%
! TTGGGAAATATTTTGCAAAG+TGG + chr4_4:75804591-75804610 Msa0703770:CDS 30.0%
ATGATCTTTACTTAGAGTGA+AGG - chr4_4:75804769-75804788 None:intergenic 30.0%
TTAACTTCATCCAATATCTC+AGG + chr4_4:75804802-75804821 Msa0703770:CDS 30.0%
! GAAAACTTTTCCTGAGATAT+TGG - chr4_4:75804815-75804834 None:intergenic 30.0%
!!! TGATCAATCTTATTTTGGTG+AGG + chr4_4:75804974-75804993 Msa0703770:intron 30.0%
!! ACTATAATGGGTCCTTATAT+TGG - chr4_4:75805212-75805231 None:intergenic 30.0%
GGTTGAAAAATGGACAAAAA+AGG - chr4_4:75805555-75805574 None:intergenic 30.0%
! AAAAGAAGACACTCAGTTTT+CGG - chr4_4:75805576-75805595 None:intergenic 30.0%
ATGAACTTAAGTTCGATTGT+TGG - chr4_4:75805852-75805871 None:intergenic 30.0%
TTTGAACAATTCATTCTTGG+TGG + chr4_4:75805871-75805890 Msa0703770:intron 30.0%
TTGAACGAAACAATTGAGTT+CGG - chr4_4:75805911-75805930 None:intergenic 30.0%
AAGGAAATTATGTGCTTGTA+GGG + chr4_4:75805999-75806018 Msa0703770:intron 30.0%
AGTTCATACCCATTACAAAA+TGG - chr4_4:75806227-75806246 Msa0703780:three_prime_UTR 30.0%
CATGCTTGTAAATATTTGCA+GGG - chr4_4:75806267-75806286 Msa0703780:three_prime_UTR 30.0%
ACATGCTTGTAAATATTTGC+AGG - chr4_4:75806268-75806287 Msa0703780:three_prime_UTR 30.0%
ATGTTACATGGTGATAACAT+GGG + chr4_4:75806284-75806303 Msa0703770:intron 30.0%
ACTAAAATTGAGCAAAACAG+AGG - chr4_4:75806479-75806498 Msa0703780:three_prime_UTR 30.0%
TGTATTTCCTTCAAAACATG+AGG - chr4_4:75806506-75806525 Msa0703780:three_prime_UTR 30.0%
ATTACGTTACTTCTCCAAGA+AGG + chr4_4:75800427-75800446 Msa0703770:five_prime_UTR 35.0%
! TGTAACTGTAATGAAGTACC+AGG - chr4_4:75800504-75800523 None:intergenic 35.0%
! ATCTCTTCAACGTGTTCTTT+TGG - chr4_4:75800544-75800563 None:intergenic 35.0%
GGAAATCGCTAATATTACAG+GGG - chr4_4:75801071-75801090 None:intergenic 35.0%
CGGAAATCGCTAATATTACA+GGG - chr4_4:75801072-75801091 None:intergenic 35.0%
CCTGTAATATTAGCGATTTC+CGG + chr4_4:75801070-75801089 Msa0703770:intron 35.0%
CTGCCATATCATGGATATTT+CGG - chr4_4:75801208-75801227 None:intergenic 35.0%
GAAATATCCATGATATGGCA+GGG + chr4_4:75801207-75801226 Msa0703770:intron 35.0%
AAATATCCATGATATGGCAG+GGG + chr4_4:75801208-75801227 Msa0703770:intron 35.0%
CAATTGTCTTCGTGTTTGTT+TGG + chr4_4:75801337-75801356 Msa0703770:intron 35.0%
!!! TTCGTGTTTGTTTGGTTTTG+TGG + chr4_4:75801345-75801364 Msa0703770:intron 35.0%
GAGAAAAGTAATACTCTCTC+CGG + chr4_4:75801604-75801623 Msa0703770:intron 35.0%
ACTGAGTTTGACAACAAAAG+TGG - chr4_4:75801796-75801815 None:intergenic 35.0%
CATATGGACTCGATGTTATT+TGG - chr4_4:75802044-75802063 None:intergenic 35.0%
AATAACATCGAGTCCATATG+CGG + chr4_4:75802044-75802063 Msa0703770:CDS 35.0%
GATCAACAAAGAAAGGCAAT+AGG + chr4_4:75802075-75802094 Msa0703770:CDS 35.0%
TGTGTACTTTGGACTCAAAA+TGG + chr4_4:75802162-75802181 Msa0703770:intron 35.0%
CTCTCTTATGGTTGAATTTC+AGG + chr4_4:75802470-75802489 Msa0703770:intron 35.0%
ATATATCCAAGACTGCAATG+TGG - chr4_4:75802584-75802603 None:intergenic 35.0%
ATAAAGCAGATATATGGTGC+TGG + chr4_4:75802644-75802663 Msa0703770:CDS 35.0%
AAGAACAGATGTGGAAGAAT+GGG + chr4_4:75803003-75803022 Msa0703770:CDS 35.0%
AAATTAGTGACCATCTCTGT+AGG - chr4_4:75803103-75803122 None:intergenic 35.0%
!! GCATTCAAAACACTTGTTGT+AGG + chr4_4:75803235-75803254 Msa0703770:CDS 35.0%
CTCAAATGGAGAACTTTCAA+TGG - chr4_4:75803311-75803330 None:intergenic 35.0%
CTTAACCTATCTTCTCATGA+TGG + chr4_4:75803502-75803521 Msa0703770:CDS 35.0%
GCATTCATGAAAACTGAAAG+AGG - chr4_4:75803776-75803795 None:intergenic 35.0%
CTTGTTCTTGGTTGATCAAT+TGG + chr4_4:75803854-75803873 Msa0703770:CDS 35.0%
TTGGTTGATCAATTGGAACA+AGG + chr4_4:75803861-75803880 Msa0703770:CDS 35.0%
TGCTTTCAGGCATAAAAAAC+CGG - chr4_4:75803906-75803925 None:intergenic 35.0%
!! TTTGTTTCTGGTCTAAACGT+AGG - chr4_4:75803942-75803961 None:intergenic 35.0%
AGACCAGAAACAAACTTTGA+TGG + chr4_4:75803948-75803967 Msa0703770:CDS 35.0%
! CAATGAAGTATTTGTCAGAG+CGG + chr4_4:75804100-75804119 Msa0703770:CDS 35.0%
! AATGAAGTATTTGTCAGAGC+GGG + chr4_4:75804101-75804120 Msa0703770:CDS 35.0%
AAATTATGTTGAGCTCGGAA+AGG + chr4_4:75804260-75804279 Msa0703770:CDS 35.0%
CTGCATAAGATGAGGAATTT+AGG - chr4_4:75804290-75804309 None:intergenic 35.0%
CTAAATTCCTCATCTTATGC+AGG + chr4_4:75804288-75804307 Msa0703770:CDS 35.0%
GAGGAAATTAATAAGCTTCC+CGG - chr4_4:75804328-75804347 None:intergenic 35.0%
AATTTCCTCACAACTCATGT+TGG + chr4_4:75804339-75804358 Msa0703770:CDS 35.0%
ATTTCCTCACAACTCATGTT+GGG + chr4_4:75804340-75804359 Msa0703770:CDS 35.0%
GAATTTGGAGGAGATATATG+AGG - chr4_4:75804378-75804397 None:intergenic 35.0%
CATATATCTCCTCCAAATTC+TGG + chr4_4:75804378-75804397 Msa0703770:CDS 35.0%
TTTGGTAAGTGGTGTATCAA+CGG - chr4_4:75804412-75804431 None:intergenic 35.0%
!! AAGGCATTTTCTTTGGTAAG+TGG - chr4_4:75804423-75804442 None:intergenic 35.0%
!! ATGCCTTTTTGCTTTTGGAT+TGG + chr4_4:75804436-75804455 Msa0703770:CDS 35.0%
AATGTATAAAAGATGGCAGC+TGG + chr4_4:75804508-75804527 Msa0703770:CDS 35.0%
! ATTAAGAACGACTTTGAAGG+AGG - chr4_4:75804561-75804580 None:intergenic 35.0%
CGAATTAAGAACGACTTTGA+AGG - chr4_4:75804564-75804583 None:intergenic 35.0%
TTCTTAATTCGATCGCCATT+GGG + chr4_4:75804573-75804592 Msa0703770:CDS 35.0%
ATAGAAGCTCTCATCAATCA+GGG - chr4_4:75804637-75804656 None:intergenic 35.0%
TGATTGATGAGAGCTTCTAT+GGG + chr4_4:75804637-75804656 Msa0703770:CDS 35.0%
GAAGAAGAGTTGAAAACTGT+AGG + chr4_4:75804678-75804697 Msa0703770:CDS 35.0%
TGTTCACAAATTCATCCAAC+GGG - chr4_4:75804839-75804858 None:intergenic 35.0%
CTGTTCACAAATTCATCCAA+CGG - chr4_4:75804840-75804859 None:intergenic 35.0%
TAAAGACATCTTTGGGTCTA+AGG + chr4_4:75804880-75804899 Msa0703770:CDS 35.0%
GGAAATATATGACTACGAAG+AGG + chr4_4:75804995-75805014 Msa0703770:intron 35.0%
! CTCAGTTTTCGGTTGAAAAA+TGG - chr4_4:75805565-75805584 None:intergenic 35.0%
ATACTGGATACTACAATGGT+GGG - chr4_4:75805706-75805725 None:intergenic 35.0%
TATACTGGATACTACAATGG+TGG - chr4_4:75805707-75805726 None:intergenic 35.0%
TGAACGAAACAATTGAGTTC+GGG - chr4_4:75805910-75805929 None:intergenic 35.0%
CAAGGAAATTATGTGCTTGT+AGG + chr4_4:75805998-75806017 Msa0703770:intron 35.0%
AAATGAGTCACAAAATGACG+TGG + chr4_4:75806133-75806152 Msa0703770:intron 35.0%
CATGTTACATGGTGATAACA+TGG + chr4_4:75806283-75806302 Msa0703770:intron 35.0%
ATTGCAATTTCTGCTAGCAA+GGG - chr4_4:75806355-75806374 Msa0703780:three_prime_UTR 35.0%
AATTGCAATTTCTGCTAGCA+AGG - chr4_4:75806356-75806375 Msa0703780:three_prime_UTR 35.0%
!! AGTATCTCCTCATGTTTTGA+AGG + chr4_4:75806496-75806515 Msa0703770:intron 35.0%
AACACGTTGAAGAGATACGA+AGG + chr4_4:75800548-75800567 Msa0703770:CDS 40.0%
CGAAGGACAAAGTTCTCTAT+CGG + chr4_4:75800565-75800584 Msa0703770:CDS 40.0%
TGGGAATCCTAATCCTTTGA+CGG + chr4_4:75800588-75800607 Msa0703770:CDS 40.0%
! ATCTTTTGCATAAAGCTCGG+CGG - chr4_4:75800644-75800663 None:intergenic 40.0%
! TTTCCTGATGGAACTGATTC+AGG + chr4_4:75800669-75800688 Msa0703770:CDS 40.0%
CCGGAAATCGCTAATATTAC+AGG - chr4_4:75801073-75801092 None:intergenic 40.0%
CGAAATATCCATGATATGGC+AGG + chr4_4:75801206-75801225 Msa0703770:intron 40.0%
AATATCCATGATATGGCAGG+GGG + chr4_4:75801209-75801228 Msa0703770:intron 40.0%
! GGAGAGAGTATAATAGAGAC+CGG - chr4_4:75801626-75801645 None:intergenic 40.0%
GGTCTCTATTATACTCTCTC+CGG + chr4_4:75801625-75801644 Msa0703770:intron 40.0%
TGAAGATAACCACTACAACG+AGG + chr4_4:75801917-75801936 Msa0703770:CDS 40.0%
GAAGATAACCACTACAACGA+GGG + chr4_4:75801918-75801937 Msa0703770:CDS 40.0%
GTTATGACAAACTCCAGTGT+TGG - chr4_4:75801951-75801970 None:intergenic 40.0%
TCTGATGACATTACTGCTAC+TGG + chr4_4:75801972-75801991 Msa0703770:CDS 40.0%
GTTGGACGATCAACAAAGAA+AGG + chr4_4:75802068-75802087 Msa0703770:CDS 40.0%
AATAGGAGCAGTGGTTACAT+AGG + chr4_4:75802092-75802111 Msa0703770:CDS 40.0%
AGTGGTTACATAGGAGAGAA+AGG + chr4_4:75802101-75802120 Msa0703770:CDS 40.0%
TCATACTCCATAGTCAAGCA+TGG - chr4_4:75802397-75802416 None:intergenic 40.0%
!! TATAGTTCCTGAATGGGTTG+AGG + chr4_4:75802601-75802620 Msa0703770:CDS 40.0%
TGCTTTATGTCAACAAGGGT+TGG - chr4_4:75802632-75802651 None:intergenic 40.0%
GGCAAGACAATTGTTGTAGT+TGG - chr4_4:75802680-75802699 None:intergenic 40.0%
! TTGAAAGCTGCTGTTTGACA+GGG - chr4_4:75802724-75802743 None:intergenic 40.0%
CCTTTGCACGAAGTTAATCT+CGG - chr4_4:75802855-75802874 None:intergenic 40.0%
CATGTGGAAGCAAAAGTTTC+CGG + chr4_4:75802955-75802974 Msa0703770:CDS 40.0%
GGTTGAAAGAAGAACAGATG+TGG + chr4_4:75802994-75803013 Msa0703770:CDS 40.0%
GAAGAACAGATGTGGAAGAA+TGG + chr4_4:75803002-75803021 Msa0703770:CDS 40.0%
AAATCAGGAGAGACTTCACA+GGG + chr4_4:75803045-75803064 Msa0703770:CDS 40.0%
TGCATTTCTTCCTACAGAGA+TGG + chr4_4:75803090-75803109 Msa0703770:CDS 40.0%
TGATGAGGCAAGGACAAAAT+TGG - chr4_4:75803143-75803162 None:intergenic 40.0%
! ATTTTGTCCTTGCCTCATCA+AGG + chr4_4:75803143-75803162 Msa0703770:CDS 40.0%
! TTTTGTCCTTGCCTCATCAA+GGG + chr4_4:75803144-75803163 Msa0703770:CDS 40.0%
ATCAAGGGAGACAATTCTCT+TGG + chr4_4:75803159-75803178 Msa0703770:CDS 40.0%
GAACACATTCAAGTATCCCT+TGG - chr4_4:75803198-75803217 None:intergenic 40.0%
ATGTGTTCCAACAGCCTTTA+TGG + chr4_4:75803210-75803229 Msa0703770:CDS 40.0%
AATGCATCCATAAAGGCTGT+TGG - chr4_4:75803220-75803239 None:intergenic 40.0%
ATGGAGAACTTTCAATGGGA+AGG - chr4_4:75803306-75803325 None:intergenic 40.0%
ATAAGCCTGGTGAAGTTAGT+AGG + chr4_4:75803422-75803441 Msa0703770:CDS 40.0%
! CATCCAGAGTTCTAATCTTG+TGG + chr4_4:75803624-75803643 Msa0703770:CDS 40.0%
CATCCACAAGATTAGAACTC+TGG - chr4_4:75803630-75803649 None:intergenic 40.0%
! CAGAGTTCTAATCTTGTGGA+TGG + chr4_4:75803628-75803647 Msa0703770:CDS 40.0%
GTCAGTCTAATGCTTGTTCT+TGG + chr4_4:75803842-75803861 Msa0703770:CDS 40.0%
AACAAGGAATTTGCATGTGC+AGG + chr4_4:75803877-75803896 Msa0703770:CDS 40.0%
AATTTGCATGTGCAGGAAAC+CGG + chr4_4:75803884-75803903 Msa0703770:CDS 40.0%
! TATGCCTGAAAGCACACAAA+AGG + chr4_4:75803912-75803931 Msa0703770:CDS 40.0%
! ATGCCACTTGTTGACAACTA+TGG + chr4_4:75804147-75804166 Msa0703770:CDS 40.0%
! TGCCACTTGTTGACAACTAT+GGG + chr4_4:75804148-75804167 Msa0703770:CDS 40.0%
CGTGTCACAGAAACAAGAAA+AGG + chr4_4:75804171-75804190 Msa0703770:CDS 40.0%
! AAATTGGCCTGCATAAGATG+AGG - chr4_4:75804298-75804317 None:intergenic 40.0%
TCTTATGCAGGCCAATTTAC+AGG + chr4_4:75804300-75804319 Msa0703770:CDS 40.0%
TTTCCTCACAACTCATGTTG+GGG + chr4_4:75804341-75804360 Msa0703770:CDS 40.0%
ATTTCAAAAACCTCTCTGGC+AGG - chr4_4:75804491-75804510 None:intergenic 40.0%
TGGCTTAAAGTTACCGTCAA+TGG + chr4_4:75804528-75804547 Msa0703770:CDS 40.0%
AAGTTACCGTCAATGGATAC+AGG + chr4_4:75804535-75804554 Msa0703770:CDS 40.0%
GTTCTTAATTCGATCGCCAT+TGG + chr4_4:75804572-75804591 Msa0703770:CDS 40.0%
TAGAAGCTCTCATCAATCAG+GGG - chr4_4:75804636-75804655 None:intergenic 40.0%
CATAGAAGCTCTCATCAATC+AGG - chr4_4:75804638-75804657 None:intergenic 40.0%
CTGATTGATGAGAGCTTCTA+TGG + chr4_4:75804636-75804655 Msa0703770:CDS 40.0%
GATTGATGAGAGCTTCTATG+GGG + chr4_4:75804638-75804657 Msa0703770:CDS 40.0%
TTTGTGAACAGCATCAGAGA+TGG + chr4_4:75804849-75804868 Msa0703770:CDS 40.0%
ACCTTGGCTAAAGACATCTT+TGG + chr4_4:75804872-75804891 Msa0703770:CDS 40.0%
CCTTGGCTAAAGACATCTTT+GGG + chr4_4:75804873-75804892 Msa0703770:CDS 40.0%
GGATCAGTATTGCATGATTC+CGG + chr4_4:75804912-75804931 Msa0703770:CDS 40.0%
ACTGCCTCTAGACCAATATA+AGG + chr4_4:75805197-75805216 Msa0703770:intron 40.0%
TACTGGATACTACAATGGTG+GGG - chr4_4:75805705-75805724 None:intergenic 40.0%
! TTACACGATCCTTTTCCTCT+CGG - chr4_4:75805778-75805797 None:intergenic 40.0%
! TAATCTAGAGTTCAGCCGAA+AGG + chr4_4:75805795-75805814 Msa0703770:intron 40.0%
TTACATGGTGATAACATGGG+TGG + chr4_4:75806287-75806306 Msa0703770:intron 40.0%
TCAGTAAAATGCGAACTGCA+AGG + chr4_4:75806398-75806417 Msa0703770:intron 40.0%
ACACAGTGAAGACTCCTTCT+TGG - chr4_4:75800444-75800463 None:intergenic 45.0%
AGCATTCTCTTCTTCACTCC+TGG + chr4_4:75800483-75800502 Msa0703770:five_prime_UTR 45.0%
AGGACAAAGTTCTCTATCGG+TGG + chr4_4:75800568-75800587 Msa0703770:CDS 45.0%
GGACAAAGTTCTCTATCGGT+GGG + chr4_4:75800569-75800588 Msa0703770:CDS 45.0%
GAATCCTAATCCTTTGACGG+AGG + chr4_4:75800591-75800610 Msa0703770:CDS 45.0%
AGATCCTCCGTCAAAGGATT+AGG - chr4_4:75800598-75800617 None:intergenic 45.0%
GTACCTGAATCAGTTCCATC+AGG - chr4_4:75800675-75800694 None:intergenic 45.0%
AAGAAAGGCAATAGGAGCAG+TGG + chr4_4:75802083-75802102 Msa0703770:CDS 45.0%
! CGGATTCAAGAGTGTGTTTC+TGG + chr4_4:75802496-75802515 Msa0703770:CDS 45.0%
AATTGTCTTGCCCTTGAAGC+CGG + chr4_4:75802688-75802707 Msa0703770:CDS 45.0%
TTGACCTTATCCGGCTTCAA+GGG - chr4_4:75802701-75802720 None:intergenic 45.0%
TTGACAGGGTTGACCTTATC+CGG - chr4_4:75802710-75802729 None:intergenic 45.0%
! CTTGAAAGCTGCTGTTTGAC+AGG - chr4_4:75802725-75802744 None:intergenic 45.0%
CCGAGATTAACTTCGTGCAA+AGG + chr4_4:75802852-75802871 Msa0703770:CDS 45.0%
AGGAATGCAGCTACTACATG+TGG + chr4_4:75802939-75802958 Msa0703770:CDS 45.0%
!! AAGTCTCTCCTGATTTGGCA+AGG - chr4_4:75803041-75803060 None:intergenic 45.0%
CTGTGAAGTCTCTCCTGATT+TGG - chr4_4:75803046-75803065 None:intergenic 45.0%
CAAATCAGGAGAGACTTCAC+AGG + chr4_4:75803044-75803063 Msa0703770:CDS 45.0%
AATCAGGAGAGACTTCACAG+GGG + chr4_4:75803046-75803065 Msa0703770:CDS 45.0%
GAGAATTGTCTCCCTTGATG+AGG - chr4_4:75803158-75803177 None:intergenic 45.0%
ACTGGATACTGGAGCTTGAT+CGG - chr4_4:75803263-75803282 None:intergenic 45.0%
TCAAGCTCCAGTATCCAGTT+TGG + chr4_4:75803264-75803283 Msa0703770:CDS 45.0%
ATGCGAACCAAACTGGATAC+TGG - chr4_4:75803274-75803293 None:intergenic 45.0%
CTTGAACATGCGAACCAAAC+TGG - chr4_4:75803281-75803300 None:intergenic 45.0%
TGCTCTGTGTACGTCTCAAT+AGG - chr4_4:75803391-75803410 None:intergenic 45.0%
!! CAGAAGCACTTCTATAAGCC+TGG + chr4_4:75803409-75803428 Msa0703770:CDS 45.0%
!!! GGAATATTTTGACCGAAGCC+CGG + chr4_4:75803461-75803480 Msa0703770:CDS 45.0%
!!! GAATATTTTGACCGAAGCCC+GGG + chr4_4:75803462-75803481 Msa0703770:CDS 45.0%
!!! AATATTTTGACCGAAGCCCG+GGG + chr4_4:75803463-75803482 Msa0703770:CDS 45.0%
! ACCTATCTTCTCATGATGGG+AGG + chr4_4:75803506-75803525 Msa0703770:CDS 45.0%
TCCTCCCATCATGAGAAGAT+AGG - chr4_4:75803510-75803529 None:intergenic 45.0%
! ATCGCCTTTTGTGTGCTTTC+AGG - chr4_4:75803919-75803938 None:intergenic 45.0%
AACAGAACTGCAGACGACAT+TGG - chr4_4:75804025-75804044 None:intergenic 45.0%
TGCCTGCAAATGTGAGCAAA+TGG + chr4_4:75804202-75804221 Msa0703770:CDS 45.0%
GCCTGCAAATGTGAGCAAAT+GGG + chr4_4:75804203-75804222 Msa0703770:CDS 45.0%
GCTGAAAACCCAGAATTTGG+AGG - chr4_4:75804390-75804409 None:intergenic 45.0%
ACGGCTGAAAACCCAGAATT+TGG - chr4_4:75804393-75804412 None:intergenic 45.0%
! GATTCGGAATCTGAAGCACA+GGG + chr4_4:75804458-75804477 Msa0703770:CDS 45.0%
! ATTCGGAATCTGAAGCACAG+GGG + chr4_4:75804459-75804478 Msa0703770:CDS 45.0%
AGAAGCTCTCATCAATCAGG+GGG - chr4_4:75804635-75804654 None:intergenic 45.0%
! GAGGAAGCATGCAGTTTCAT+TGG + chr4_4:75804717-75804736 Msa0703770:CDS 45.0%
! CAGGAAAAGTTTTCTCCCGT+TGG + chr4_4:75804821-75804840 Msa0703770:CDS 45.0%
CCCAAAGATGTCTTTAGCCA+AGG - chr4_4:75804876-75804895 None:intergenic 45.0%
TCATGCAATACTGATCCCAC+AGG - chr4_4:75804909-75804928 None:intergenic 45.0%
CAGTATTGCATGATTCCGGA+TGG + chr4_4:75804916-75804935 Msa0703770:CDS 45.0%
! GGGTCCTTATATTGGTCTAG+AGG - chr4_4:75805204-75805223 None:intergenic 45.0%
CTCTTTCCCTTGAGATCTCT+TGG + chr4_4:75805665-75805684 Msa0703770:intron 45.0%
TTTCCCTTGAGATCTCTTGG+CGG + chr4_4:75805668-75805687 Msa0703770:intron 45.0%
ATTCCGCCAAGAGATCTCAA+GGG - chr4_4:75805674-75805693 None:intergenic 45.0%
AATTCCGCCAAGAGATCTCA+AGG - chr4_4:75805675-75805694 None:intergenic 45.0%
GTTAACTCTTGAGTTCCGAG+AGG + chr4_4:75805760-75805779 Msa0703770:intron 45.0%
TCTTGAGTTCCGAGAGGAAA+AGG + chr4_4:75805766-75805785 Msa0703770:intron 45.0%
ACGAAACAATTGAGTTCGGG+TGG - chr4_4:75805907-75805926 None:intergenic 45.0%
TCTTTCCTCCATGCAGTTGT+GGG - chr4_4:75806533-75806552 Msa0703780:intron 45.0%
!!! AATTTTAATCTTTTTTTAAA+AGG + chr4_4:75802292-75802311 Msa0703770:intron 5.0%
!! AATAAAAAAAATACTATAAT+GGG - chr4_4:75805224-75805243 None:intergenic 5.0%
!! TAATAAAAAAAATACTATAA+TGG - chr4_4:75805225-75805244 None:intergenic 5.0%
TGGTGAAGATCCTCCGTCAA+AGG - chr4_4:75800604-75800623 None:intergenic 50.0%
CGGAGAGATTCTTAACGGCA+TGG - chr4_4:75800624-75800643 None:intergenic 50.0%
CTCGGCGGAGAGATTCTTAA+CGG - chr4_4:75800629-75800648 None:intergenic 50.0%
GTTTACCCCCTGCCATATCA+TGG - chr4_4:75801217-75801236 None:intergenic 50.0%
GTTTCACTCCCTCGTTGTAG+TGG - chr4_4:75801929-75801948 None:intergenic 50.0%
ATCGAGTCCATATGCGGTGT+TGG + chr4_4:75802050-75802069 Msa0703770:CDS 50.0%
TGATCGTCCAACACCGCATA+TGG - chr4_4:75802060-75802079 None:intergenic 50.0%
CCAAGACTGCAATGTGGACA+AGG - chr4_4:75802578-75802597 None:intergenic 50.0%
CCTTGTCCACATTGCAGTCT+TGG + chr4_4:75802575-75802594 Msa0703770:CDS 50.0%
GTTGACCTTATCCGGCTTCA+AGG - chr4_4:75802702-75802721 None:intergenic 50.0%
CACACTATATCTCTCCGCAG+AGG + chr4_4:75802898-75802917 Msa0703770:CDS 50.0%
GGAAGCAAAAGTTTCCGGTC+AGG + chr4_4:75802960-75802979 Msa0703770:CDS 50.0%
ACCACACTTTCTGACCTGAC+CGG - chr4_4:75802977-75802996 None:intergenic 50.0%
!! GGAAGAATGGGTTGTGACAC+TGG + chr4_4:75803015-75803034 Msa0703770:CDS 50.0%
ACAGGGGTAAAAGCTCACCA+GGG + chr4_4:75803062-75803081 Msa0703770:CDS 50.0%
GGAAGAAATGCATAGACCCC+TGG - chr4_4:75803082-75803101 None:intergenic 50.0%
TTGTCTCCCTTGATGAGGCA+AGG - chr4_4:75803153-75803172 None:intergenic 50.0%
AGCAGCCTACTAACTTCACC+AGG - chr4_4:75803430-75803449 None:intergenic 50.0%
GAATGCACACAGCACTATGC+AGG + chr4_4:75803790-75803809 Msa0703770:CDS 50.0%
! GAAGTATTTGTCAGAGCGGG+AGG + chr4_4:75804104-75804123 Msa0703770:CDS 50.0%
CGCCCATAGTTGTCAACAAG+TGG - chr4_4:75804153-75804172 None:intergenic 50.0%
GCCCATTTGCTCACATTTGC+AGG - chr4_4:75804207-75804226 None:intergenic 50.0%
GCAGGCCAATTTACAGGTTC+CGG + chr4_4:75804306-75804325 Msa0703770:CDS 50.0%
CAGGCCAATTTACAGGTTCC+GGG + chr4_4:75804307-75804326 Msa0703770:CDS 50.0%
GCTTCCCGGAACCTGTAAAT+TGG - chr4_4:75804314-75804333 None:intergenic 50.0%
AAGCCCCAACATGAGTTGTG+AGG - chr4_4:75804347-75804366 None:intergenic 50.0%
! GGATTCGGAATCTGAAGCAC+AGG + chr4_4:75804457-75804476 Msa0703770:CDS 50.0%
AGGAGGCCTGTATCCATTGA+CGG - chr4_4:75804544-75804563 None:intergenic 50.0%
AGGAGTGATGTCCAGTTGTG+AGG + chr4_4:75804698-75804717 Msa0703770:CDS 50.0%
ACTGCATGCTTCCTCACAAC+TGG - chr4_4:75804712-75804731 None:intergenic 50.0%
ACAGCATCAGAGATGGACCT+TGG + chr4_4:75804856-75804875 Msa0703770:CDS 50.0%
! TTTGGGTCTAAGGTCTCCTG+TGG + chr4_4:75804890-75804909 Msa0703770:CDS 50.0%
! TTGGGTCTAAGGTCTCCTGT+GGG + chr4_4:75804891-75804910 Msa0703770:CDS 50.0%
ATTTACCAGCGAGAGATCCC+AGG + chr4_4:75806451-75806470 Msa0703770:intron 50.0%
!! TGAGCAAAACAGAGGCACCT+GGG - chr4_4:75806471-75806490 Msa0703780:three_prime_UTR 50.0%
!! TTGAGCAAAACAGAGGCACC+TGG - chr4_4:75806472-75806491 Msa0703780:three_prime_UTR 50.0%
TACAAAGCCCCACAACTGCA+TGG + chr4_4:75806522-75806541 Msa0703770:CDS 50.0%
CTTTCCTCCATGCAGTTGTG+GGG - chr4_4:75806532-75806551 Msa0703780:intron 50.0%
CTCTTTCCTCCATGCAGTTG+TGG - chr4_4:75806534-75806553 Msa0703780:intron 50.0%
CGAGGGAGTGAAACCAACAC+TGG + chr4_4:75801935-75801954 Msa0703770:CDS 55.0%
GGCTTCTCCTCAACCCATTC+AGG - chr4_4:75802611-75802630 None:intergenic 55.0%
CTTGCCCTTGAAGCCGGATA+AGG + chr4_4:75802694-75802713 Msa0703770:CDS 55.0%
GCAGTTACAGTGCTCTGTCC+AGG - chr4_4:75802818-75802837 None:intergenic 55.0%
TCCGGTCAGGTCAGAAAGTG+TGG + chr4_4:75802973-75802992 Msa0703770:CDS 55.0%
!! GACACTGGCCTTGCCAAATC+AGG + chr4_4:75803030-75803049 Msa0703770:CDS 55.0%
CACAGGGGTAAAAGCTCACC+AGG + chr4_4:75803061-75803080 Msa0703770:CDS 55.0%
CAGGGGTAAAAGCTCACCAG+GGG + chr4_4:75803063-75803082 Msa0703770:CDS 55.0%
GTAGGCTGCTGCCTGAATTC+TGG + chr4_4:75803440-75803459 Msa0703770:CDS 55.0%
CTGAGATGCGACTTGCCATC+CGG - chr4_4:75804934-75804953 None:intergenic 55.0%
AAAGCCCCACAACTGCATGG+AGG + chr4_4:75806525-75806544 Msa0703770:CDS 55.0%
CAAGTACACTCCTTCGCCCC+GGG - chr4_4:75803482-75803501 None:intergenic 60.0%
GCAAGTACACTCCTTCGCCC+CGG - chr4_4:75803483-75803502 None:intergenic 60.0%
AGGCACCTGGGATCTCTCGC+TGG - chr4_4:75806459-75806478 Msa0703780:three_prime_UTR 65.0%
TTGACCGAAGCCCGGGGCGA+AGG + chr4_4:75803469-75803488 Msa0703770:CDS 70.0%
CACTCCTTCGCCCCGGGCTT+CGG - chr4_4:75803476-75803495 None:intergenic 70.0%
! GGGGAGTGCACCTGCCAGAG+AGG + chr4_4:75804478-75804497 Msa0703770:CDS 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 75800413 75806567 75800413 ID=Msa0703770;Name=Msa0703770
chr4_4 mRNA 75800413 75806567 75800413 ID=Msa0703770-mRNA-1;Parent=Msa0703770;Name=Msa0703770-mRNA-1;_AED=0.03;_eAED=0.03;_QI=119|0.66|0.5|0.75|1|1|4|0|972
chr4_4 exon 75800413 75800690 75800413 ID=Msa0703770-mRNA-1:exon:23866;Parent=Msa0703770-mRNA-1
chr4_4 exon 75801912 75802122 75801912 ID=Msa0703770-mRNA-1:exon:23867;Parent=Msa0703770-mRNA-1
chr4_4 exon 75802492 75804990 75802492 ID=Msa0703770-mRNA-1:exon:23868;Parent=Msa0703770-mRNA-1
chr4_4 exon 75806518 75806567 75806518 ID=Msa0703770-mRNA-1:exon:23869;Parent=Msa0703770-mRNA-1
chr4_4 five_prime_UTR 75800413 75800531 75800413 ID=Msa0703770-mRNA-1:five_prime_utr;Parent=Msa0703770-mRNA-1
chr4_4 CDS 75800532 75800690 75800532 ID=Msa0703770-mRNA-1:cds;Parent=Msa0703770-mRNA-1
chr4_4 CDS 75801912 75802122 75801912 ID=Msa0703770-mRNA-1:cds;Parent=Msa0703770-mRNA-1
chr4_4 CDS 75802492 75804990 75802492 ID=Msa0703770-mRNA-1:cds;Parent=Msa0703770-mRNA-1
chr4_4 CDS 75806518 75806567 75806518 ID=Msa0703770-mRNA-1:cds;Parent=Msa0703770-mRNA-1
Gene Sequence

>Msa0703770

ATGGCTACACCAAAAGAACACGTTGAAGAGATACGAAGGACAAAGTTCTCTATCGGTGGGAATCCTAATCCTTTGACGGAGGATCTTCACCATGCCGTTAAGAATCTCTCCGCCGAGCTTTATGCAAAAGATGTTCATTTCCTGATGGAACTGATTCAGAATGCTGAAGATAACCACTACAACGAGGGAGTGAAACCAACACTGGAGTTTGTCATAACTTCTGATGACATTACTGCTACTGGTGCTCCAGCCACATTACTTATTTTCAATAATGAAAAGGGTTTCTCTCCAAATAACATCGAGTCCATATGCGGTGTTGGACGATCAACAAAGAAAGGCAATAGGAGCAGTGGTTACATAGGAGAGAAAGGAATCGGATTCAAGAGTGTGTTTCTGGTTAGTGCTCAACCATATATTTTTAGCAATGGATATCAGATAAGGTTCAATGAGATGCCTTGTCCACATTGCAGTCTTGGATATATAGTTCCTGAATGGGTTGAGGAGAAGCCAACCCTTGTTGACATAAAGCAGATATATGGTGCTGGTGAAGCTCTTCCAACTACAACAATTGTCTTGCCCTTGAAGCCGGATAAGGTCAACCCTGTCAAACAGCAGCTTTCAAGCGTTCATCCAGAAGTTCTTTTGTTTCTTACAAAAATCAGACACCTTTCTGTAAGAGAAGTTAATGAAAATCCTGGACAGAGCACTGTAACTGCTGTATCTATTTCAACCGAGATTAACTTCGTGCAAAGGAAAAACATGAATTCTGAGTCTTACACACTATATCTCTCCGCAGAGGAAAATAGTAACAATGAGAAGGAATGCAGCTACTACATGTGGAAGCAAAAGTTTCCGGTCAGGTCAGAAAGTGTGGTTGAAAGAAGAACAGATGTGGAAGAATGGGTTGTGACACTGGCCTTGCCAAATCAGGAGAGACTTCACAGGGGTAAAAGCTCACCAGGGGTCTATGCATTTCTTCCTACAGAGATGGTCACTAATTTTCCTTTCATTATTCAAGCCAATTTTGTCCTTGCCTCATCAAGGGAGACAATTCTCTTGGATAATAAATGGAACCAAGGGATACTTGAATGTGTTCCAACAGCCTTTATGGATGCATTCAAAACACTTGTTGTAGGATCCGATCAAGCTCCAGTATCCAGTTTGGTTCGCATGTTCAAGTTCCTTCCCATTGAAAGTTCTCCATTTGAGAAGTTTAATTACGTGAGGGACAAAATCAAAGAAAAATTGGTTAATGAAAATATTGTTCCTATTGAGACGTACACAGAGCAGAAGCACTTCTATAAGCCTGGTGAAGTTAGTAGGCTGCTGCCTGAATTCTGGAATATTTTGACCGAAGCCCGGGGCGAAGGAGTGTACTTGCTTAACCTATCTTCTCATGATGGGAGGAAGATCTTGAGTTCTTTCTTTGATAAGATTGAATATGATAATGTACTTGATTTTTTAGGGCTTAAATCAGTGAATGTTGATTGGTATGCAAAGTGCATCCAGAGTTCTAATCTTGTGGATGGAGTATCAGAAGATCTCTATCTTCAAATTTTGCTGTTTATTGCTAAAAACTGGTCTTCAATATTTAAAGGCACAGACATAATCAATATTCCATTGATAAAATATGTCGCTTCTGGAACTCTATCCTCTTTCAGTTTTCATGAATGCACACAGCACTATGCAGGTGCGAAGCGAGTAGTAATGACAGACTCAAGTCAGTCTAATGCTTGTTCTTGGTTGATCAATTGGAACAAGGAATTTGCATGTGCAGGAAACCGGTTTTTTATGCCTGAAAGCACACAAAAGGCGATCCTACGTTTAGACCAGAAACAAACTTTGATGGAATGGCTTGCAAACGACGTTTATGTTACTAATTTGAGCGTGTACAGTTTTGCCAATGTCGTCTGCAGTTCTGTTAAAAATAACAGCAAACATGTCATTGCATATGCTCACTTTTTATACCACTCTTTGTCAATGAAGTATTTGTCAGAGCGGGAGGTTGATAGTCTCTGTAATTCTATGCCACTTGTTGACAACTATGGGCGTGTCACAGAAACAAGAAAAGGAGTTCTTGTGCCTGCAAATGTGAGCAAATGGGCAGACTTGATTGTTTCTAATCCTTGGAGCAATGAAAATTATGTTGAGCTCGGAAAGGAGTACCTAAATTCCTCATCTTATGCAGGCCAATTTACAGGTTCCGGGAAGCTTATTAATTTCCTCACAACTCATGTTGGGGCTTCTGACATACCTCATATATCTCCTCCAAATTCTGGGTTTTCAGCCGTTGATACACCACTTACCAAAGAAAATGCCTTTTTGCTTTTGGATTGGATTCGGAATCTGAAGCACAGGGGAGTGCACCTGCCAGAGAGGTTTTTGAAATGTATAAAAGATGGCAGCTGGCTTAAAGTTACCGTCAATGGATACAGGCCTCCTTCAAAGTCGTTCTTAATTCGATCGCCATTGGGAAATATTTTGCAAAGTGGTTCAGTTCTTGTTGATATCCCCCTGATTGATGAGAGCTTCTATGGGGAGAGAATAAACGAGTTTGAAGAAGAGTTGAAAACTGTAGGAGTGATGTCCAGTTGTGAGGAAGCATGCAGTTTCATTGGAAGAGAACTGATGTCTCGTGCATCTTCCTTCACTCTAAGTAAAGATCATGTTCTTTTGATGCTTAACTTCATCCAATATCTCAGGAAAAGTTTTCTCCCGTTGGATGAATTTGTGAACAGCATCAGAGATGGACCTTGGCTAAAGACATCTTTGGGTCTAAGGTCTCCTGTGGGATCAGTATTGCATGATTCCGGATGGCAAGTCGCATCTCAGATTAGCAATATCCCTTTTATTGATCAATCTTATTTTGGAAATACAAAGCCCCACAACTGCATGGAGGAAAGAGCAGTTTCTAATTAG
Protein sequence

>Msa0703770

MATPKEHVEEIRRTKFSIGGNPNPLTEDLHHAVKNLSAELYAKDVHFLMELIQNAEDNHYNEGVKPTLEFVITSDDITATGAPATLLIFNNEKGFSPNNIESICGVGRSTKKGNRSSGYIGEKGIGFKSVFLVSAQPYIFSNGYQIRFNEMPCPHCSLGYIVPEWVEEKPTLVDIKQIYGAGEALPTTTIVLPLKPDKVNPVKQQLSSVHPEVLLFLTKIRHLSVREVNENPGQSTVTAVSISTEINFVQRKNMNSESYTLYLSAEENSNNEKECSYYMWKQKFPVRSESVVERRTDVEEWVVTLALPNQERLHRGKSSPGVYAFLPTEMVTNFPFIIQANFVLASSRETILLDNKWNQGILECVPTAFMDAFKTLVVGSDQAPVSSLVRMFKFLPIESSPFEKFNYVRDKIKEKLVNENIVPIETYTEQKHFYKPGEVSRLLPEFWNILTEARGEGVYLLNLSSHDGRKILSSFFDKIEYDNVLDFLGLKSVNVDWYAKCIQSSNLVDGVSEDLYLQILLFIAKNWSSIFKGTDIINIPLIKYVASGTLSSFSFHECTQHYAGAKRVVMTDSSQSNACSWLINWNKEFACAGNRFFMPESTQKAILRLDQKQTLMEWLANDVYVTNLSVYSFANVVCSSVKNNSKHVIAYAHFLYHSLSMKYLSEREVDSLCNSMPLVDNYGRVTETRKGVLVPANVSKWADLIVSNPWSNENYVELGKEYLNSSSYAGQFTGSGKLINFLTTHVGASDIPHISPPNSGFSAVDTPLTKENAFLLLDWIRNLKHRGVHLPERFLKCIKDGSWLKVTVNGYRPPSKSFLIRSPLGNILQSGSVLVDIPLIDESFYGERINEFEEELKTVGVMSSCEEACSFIGRELMSRASSFTLSKDHVLLMLNFIQYLRKSFLPLDEFVNSIRDGPWLKTSLGLRSPVGSVLHDSGWQVASQISNIPFIDQSYFGNTKPHNCMEERAVSN*