AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0709110

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0709110 MtrunA17_Chr8g0344971 96.419 782 12 1 1 782 1 766 0.0 1528
Msa0709110 MtrunA17_Chr4g0037221 56.714 767 295 13 28 781 31 773 0.0 845
Msa0709110 MtrunA17_Chr2g0300751 49.686 797 353 13 9 781 6 778 0.0 750
Msa0709110 MtrunA17_Chr4g0053781 49.483 774 363 12 4 776 9 755 0.0 747
Msa0709110 MtrunA17_Chr1g0204321 48.917 785 373 9 8 781 15 782 0.0 741
Msa0709110 MtrunA17_Chr5g0401511 48.516 775 374 12 6 778 12 763 0.0 711
Msa0709110 MtrunA17_Chr1g0152771 46.795 780 379 13 7 776 10 763 0.0 683
Msa0709110 MtrunA17_Chr4g0070391 47.815 778 361 15 6 776 13 752 0.0 682
Msa0709110 MtrunA17_Chr8g0344331 50.852 763 332 16 28 773 36 772 0.0 681
Msa0709110 MtrunA17_Chr4g0020651 47.826 782 381 15 1 778 1 759 0.0 677
Msa0709110 MtrunA17_Chr7g0262161 45.971 757 379 12 29 776 26 761 0.0 643
Msa0709110 MtrunA17_Chr3g0134621 45.244 778 365 13 8 776 11 736 0.0 630
Msa0709110 MtrunA17_Chr7g0246461 43.325 794 370 14 9 778 5 742 0.0 629
Msa0709110 MtrunA17_Chr3g0120521 42.490 739 392 14 45 775 56 769 0.0 575
Msa0709110 MtrunA17_Chr4g0057531 44.043 747 390 14 41 779 54 780 0.0 567
Msa0709110 MtrunA17_Chr4g0057471 43.073 729 385 14 58 778 5 711 0.0 560
Msa0709110 MtrunA17_Chr8g0345971 41.397 773 394 14 26 777 26 760 0.0 553
Msa0709110 MtrunA17_Chr5g0407701 44.861 720 352 16 66 777 69 751 0.0 549
Msa0709110 MtrunA17_Chr8g0369891 43.715 716 360 12 66 775 74 752 0.0 549
Msa0709110 MtrunA17_Chr4g0057481 44.034 704 370 14 76 775 6 689 0.0 548
Msa0709110 MtrunA17_Chr4g0076611 41.528 720 385 14 65 775 1 693 0.0 548
Msa0709110 MtrunA17_Chr1g0189251 41.065 789 404 16 4 776 11 754 0.0 546
Msa0709110 MtrunA17_Chr5g0398241 44.282 752 372 16 29 775 44 753 0.0 545
Msa0709110 MtrunA17_Chr2g0285111 42.934 743 368 16 66 778 72 788 0.0 540
Msa0709110 MtrunA17_Chr5g0398401 43.576 755 379 16 29 778 44 756 0.0 538
Msa0709110 MtrunA17_Chr4g0057061 42.857 770 381 21 21 777 53 776 7.88e-180 534
Msa0709110 MtrunA17_Chr2g0285121 40.202 791 414 19 22 778 20 785 7.94e-180 535
Msa0709110 MtrunA17_Chr8g0345981 39.873 785 423 17 8 776 7 758 8.15e-178 529
Msa0709110 MtrunA17_Chr4g0057491 45.997 637 323 12 142 775 3 621 9.29e-178 524
Msa0709110 MtrunA17_Chr5g0398331 43.254 756 379 16 27 775 38 750 8.04e-176 523
Msa0709110 MtrunA17_Chr5g0423261 45.455 638 327 12 141 775 2 621 8.49e-175 516
Msa0709110 MtrunA17_Chr5g0398351 44.106 755 376 15 29 779 25 737 2.07e-174 541
Msa0709110 MtrunA17_Chr5g0398351 44.048 756 374 16 29 778 795 1507 1.30e-173 539
Msa0709110 MtrunA17_Chr4g0026641 39.974 783 417 19 10 777 11 755 2.79e-174 520
Msa0709110 MtrunA17_Chr8g0377961 39.744 780 385 18 33 779 51 778 3.77e-174 520
Msa0709110 MtrunA17_Chr8g0345991 39.359 780 430 14 8 776 7 754 6.04e-173 516
Msa0709110 MtrunA17_Chr7g0276151 39.822 786 411 19 9 776 15 756 1.85e-172 515
Msa0709110 MtrunA17_Chr7g0248871 39.174 799 417 21 4 775 7 763 6.62e-172 514
Msa0709110 MtrunA17_Chr1g0189561 39.747 790 420 19 3 775 10 760 9.39e-171 511
Msa0709110 MtrunA17_Chr8g0351011 43.217 715 358 20 64 775 82 751 1.80e-170 509
Msa0709110 MtrunA17_Chr7g0250481 40.105 763 404 20 45 775 56 797 3.15e-169 508
Msa0709110 MtrunA17_Chr4g0057461 43.887 638 329 15 142 769 3 621 7.32e-169 501
Msa0709110 MtrunA17_Chr5g0398311 43.229 768 385 16 14 777 28 748 1.34e-166 499
Msa0709110 MtrunA17_Chr4g0057511 44.076 633 331 13 146 775 3 615 1.83e-165 492
Msa0709110 MtrunA17_Chr2g0303881 39.108 762 411 16 32 776 1 726 4.01e-165 495
Msa0709110 MtrunA17_Chr8g0345961 38.987 790 422 19 4 776 11 757 1.99e-164 494
Msa0709110 MtrunA17_Chr3g0136151 41.161 741 389 19 54 777 53 763 7.94e-164 493
Msa0709110 MtrunA17_Chr7g0227991 39.286 784 407 20 4 778 13 736 1.35e-163 491
Msa0709110 MtrunA17_Chr7g0246451 41.119 715 375 17 63 775 75 745 3.77e-162 488
Msa0709110 MtrunA17_Chr7g0266051 42.391 736 371 21 46 775 17 705 2.37e-160 482
Msa0709110 MtrunA17_Chr7g0250411 40.325 739 390 22 65 779 76 787 7.75e-159 481
Msa0709110 MtrunA17_Chr3g0143251 39.076 801 419 22 5 776 5 765 1.31e-158 479
Msa0709110 MtrunA17_Chr7g0250371 40.805 745 377 23 65 778 76 787 2.09e-157 477
Msa0709110 MtrunA17_Chr8g0334521 38.471 785 410 20 6 775 7 733 2.53e-155 470
Msa0709110 MtrunA17_Chr7g0250391 39.373 734 396 20 65 775 75 782 8.75e-154 468
Msa0709110 MtrunA17_Chr1g0170081 39.833 718 373 18 63 777 71 732 8.99e-153 463
Msa0709110 MtrunA17_Chr6g0470881 38.714 793 404 24 1 775 1 729 9.26e-153 463
Msa0709110 MtrunA17_Chr3g0079971 41.851 724 352 24 63 777 70 733 1.92e-152 462
Msa0709110 MtrunA17_Chr8g0354771 40.166 722 405 12 65 778 64 766 2.21e-150 458
Msa0709110 MtrunA17_Chr1g0146271 40.390 718 371 19 63 777 71 734 1.22e-149 455
Msa0709110 MtrunA17_Chr6g0470851 39.917 719 362 20 65 775 73 729 1.38e-149 455
Msa0709110 MtrunA17_Chr7g0250331 39.453 768 377 24 65 778 76 809 3.96e-149 456
Msa0709110 MtrunA17_Chr1g0146251 40.083 721 371 19 63 777 71 736 3.51e-148 451
Msa0709110 MtrunA17_Chr8g0334491 39.142 723 370 19 63 777 69 729 8.81e-143 437
Msa0709110 MtrunA17_Chr8g0354741 41.960 653 332 17 136 778 21 636 1.53e-140 428
Msa0709110 MtrunA17_Chr5g0439271 40.294 613 331 15 179 775 8 601 8.49e-133 407
Msa0709110 MtrunA17_Chr7g0248861 39.778 631 321 15 23 625 23 622 2.09e-130 409
Msa0709110 MtrunA17_Chr7g0248861 51.695 236 111 3 122 356 626 859 8.01e-61 221
Msa0709110 MtrunA17_Chr8g0376841 43.097 536 262 15 64 587 77 581 1.32e-123 383
Msa0709110 MtrunA17_Chr2g0301011 37.937 572 257 13 94 657 4 485 2.56e-103 327
Msa0709110 MtrunA17_Chr4g0071871 34.674 721 409 22 66 746 90 788 6.53e-102 332
Msa0709110 MtrunA17_Chr2g0298601 35.422 734 386 26 66 746 90 788 2.91e-98 323
Msa0709110 MtrunA17_Chr5g0447171 38.185 529 257 10 293 778 9 510 5.01e-95 305
Msa0709110 MtrunA17_Chr4g0075331 32.115 766 445 21 54 775 3 737 1.40e-93 308
Msa0709110 MtrunA17_Chr3g0143241 40.206 485 246 15 7 470 7 468 4.01e-93 302
Msa0709110 MtrunA17_Chr2g0302951 31.339 769 467 22 50 778 94 841 2.48e-92 308
Msa0709110 MtrunA17_Chr8g0380961 32.143 700 414 21 66 723 118 798 2.59e-85 288
Msa0709110 MtrunA17_Chr7g0261691 41.908 346 189 5 130 470 5 343 2.45e-80 261
Msa0709110 MtrunA17_Chr7g0250461 39.312 407 217 11 65 453 76 470 1.62e-79 264
Msa0709110 MtrunA17_Chr4g0026651 44.771 306 134 6 80 354 2 303 7.26e-76 248
Msa0709110 MtrunA17_Chr6g0480721 42.722 316 163 6 65 377 5 305 6.28e-75 255
Msa0709110 MtrunA17_Chr6g0480721 43.522 301 151 6 475 775 318 599 1.29e-66 233
Msa0709110 MtrunA17_Chr7g0261701 43.554 287 146 7 489 775 19 289 2.36e-70 233
Msa0709110 MtrunA17_Chr8g0346361 40.233 343 178 7 434 775 180 496 5.61e-69 236
Msa0709110 MtrunA17_Chr8g0346361 47.500 200 86 4 155 352 4 186 6.30e-47 174
Msa0709110 MtrunA17_Chr7g0250441 42.759 290 152 8 492 779 9 286 3.47e-64 217
Msa0709110 MtrunA17_Chr3g0097061 42.424 330 151 9 91 412 1 299 4.72e-63 218
Msa0709110 MtrunA17_Chr3g0097061 46.218 119 56 1 547 665 331 441 9.91e-26 111
Msa0709110 MtrunA17_Chr2g0312861 41.985 262 135 5 515 775 1 246 4.88e-56 194
Msa0709110 MtrunA17_Chr3g0105451 39.216 306 149 10 479 777 5 280 6.97e-56 193
Msa0709110 MtrunA17_Chr2g0301031 40.977 266 136 5 515 777 1 248 5.94e-55 189
Msa0709110 MtrunA17_Chr4g0026661 40.154 259 142 5 515 773 12 257 1.85e-54 189
Msa0709110 MtrunA17_Chr3g0103071 40.411 292 163 5 265 554 1 283 4.09e-54 188
Msa0709110 MtrunA17_Chr3g0105461 36.915 363 178 8 1 354 1 321 3.43e-52 185
Msa0709110 MtrunA17_Chr2g0301911 35.598 368 196 11 155 518 30 360 9.89e-47 171
Msa0709110 MtrunA17_Chr4g0071191 43.891 221 112 4 480 700 42 250 1.41e-46 166
Msa0709110 MtrunA17_Chr3g0103061 34.457 267 155 6 4 257 3 262 4.28e-43 157
Msa0709110 MtrunA17_Chr2g0301921 40.991 222 112 7 556 775 1 205 5.61e-42 152
Msa0709110 MtrunA17_Chr2g0312841 43.367 196 93 4 155 348 9 188 2.15e-39 144
Msa0709110 MtrunA17_Chr5g0418921 50.000 134 66 1 486 618 3 136 8.95e-36 133
Msa0709110 MtrunA17_Chr4g0035881 52.817 142 64 2 217 355 4 145 9.83e-34 132
Msa0709110 MtrunA17_Chr4g0035881 38.424 203 103 6 397 587 125 317 1.59e-27 114
Msa0709110 MtrunA17_Chr5g0436021 45.181 166 78 2 180 342 31 186 8.58e-33 125
Msa0709110 MtrunA17_Chr2g0301021 30.159 378 155 13 63 436 71 343 4.16e-32 129
Msa0709110 MtrunA17_Chr3g0103081 40.523 153 80 5 623 775 1 142 1.88e-27 108
Msa0709110 MtrunA17_Chr8g0376851 35.465 172 104 4 605 775 6 171 1.63e-26 107
Msa0709110 MtrunA17_Chr5g0436031 35.542 166 99 4 610 775 23 180 1.88e-25 105
Msa0709110 MtrunA17_Chr3g0142981 40.000 185 76 4 199 375 42 199 8.95e-24 99.8
Msa0709110 MtrunA17_Chr5g0398341 50.515 97 47 1 556 652 1 96 2.86e-22 92.0
Msa0709110 MtrunA17_Chr3g0143021 42.718 103 57 1 65 167 7 107 6.01e-21 88.6
Msa0709110 MtrunA17_Chr7g0248851 36.538 156 86 5 623 775 1 146 1.19e-20 89.4
Msa0709110 MtrunA17_Chr3g0143231 50.538 93 39 3 498 587 1 89 2.02e-18 80.9
Msa0709110 MtrunA17_Chr4g0035871 36.111 144 91 1 36 179 8 150 5.81e-18 81.6
Msa0709110 MtrunA17_Chr3g0142971 47.826 92 35 3 498 583 1 85 2.68e-17 77.4
Msa0709110 MtrunA17_Chr5g0439281 31.176 170 99 6 27 179 27 195 1.52e-16 79.0
Msa0709110 MtrunA17_Chr3g0077671 52.055 73 34 1 547 618 237 309 3.40e-16 80.5
Msa0709110 MtrunA17_Chr3g0142961 32.824 131 81 4 604 730 10 137 4.08e-16 75.9
Msa0709110 MtrunA17_Chr8g0346961 37.190 121 68 4 585 702 1 116 2.72e-12 64.3
Msa0709110 MtrunA17_Chr3g0143221 27.119 177 102 7 604 776 10 163 4.42e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0709110 AT3G14240.1 76.821 755 167 3 29 781 27 775 0.0 1185
Msa0709110 AT4G34980.1 53.836 782 330 12 8 781 6 764 0.0 808
Msa0709110 AT5G67360.1 50.713 771 353 9 6 776 12 755 0.0 763
Msa0709110 AT2G05920.1 51.688 770 335 13 14 779 17 753 0.0 741
Msa0709110 AT5G51750.1 49.430 789 371 8 3 781 10 780 0.0 740
Msa0709110 AT3G14067.1 48.980 784 360 14 9 779 15 771 0.0 703
Msa0709110 AT1G04110.1 43.199 794 414 11 1 778 1 773 0.0 644
Msa0709110 AT1G01900.1 43.627 761 405 9 21 778 35 774 0.0 593
Msa0709110 AT2G04160.1 42.287 752 404 13 33 777 44 772 0.0 568
Msa0709110 AT5G59810.1 41.849 779 404 19 17 777 29 776 0.0 543
Msa0709110 AT5G45650.2 40.025 792 411 17 26 777 23 790 3.78e-169 508
Msa0709110 AT5G45650.1 40.025 792 411 17 26 777 23 790 3.78e-169 508
Msa0709110 AT4G00230.1 42.449 735 373 17 45 775 55 743 4.77e-168 503
Msa0709110 AT1G32960.1 39.873 785 409 20 19 778 22 768 5.99e-162 489
Msa0709110 AT4G10540.1 39.596 793 424 17 6 778 9 766 8.87e-162 488
Msa0709110 AT1G20160.2 39.247 744 398 19 54 778 17 725 2.16e-160 483
Msa0709110 AT5G59100.1 40.984 732 378 18 50 775 54 737 6.43e-160 482
Msa0709110 AT1G20160.1 39.031 743 401 18 54 778 56 764 9.92e-160 483
Msa0709110 AT4G10520.1 38.393 784 430 19 7 778 5 747 8.60e-159 480
Msa0709110 AT4G10550.1 39.497 795 425 17 6 778 9 769 1.00e-158 480
Msa0709110 AT5G03620.1 42.127 724 367 18 66 775 73 758 2.45e-158 479
Msa0709110 AT4G10550.3 40.339 766 406 15 30 778 54 785 4.09e-158 479
Msa0709110 AT4G10550.4 41.281 734 381 14 62 778 13 713 4.43e-158 477
Msa0709110 AT4G10550.2 41.281 734 381 14 62 778 13 713 4.43e-158 477
Msa0709110 AT5G59090.1 40.782 716 363 18 65 775 69 728 4.85e-157 474
Msa0709110 AT5G59190.1 39.641 724 373 18 62 780 29 693 3.64e-156 471
Msa0709110 AT1G20150.1 39.789 759 392 22 54 782 54 777 1.05e-155 473
Msa0709110 AT5G59090.3 40.782 716 361 19 65 775 69 726 7.55e-155 469
Msa0709110 AT5G59120.1 39.896 767 387 22 21 775 23 727 1.18e-154 468
Msa0709110 AT5G59090.2 40.363 716 361 18 65 775 69 723 1.27e-154 468
Msa0709110 AT4G10510.1 39.529 764 414 15 30 778 26 756 1.03e-153 467
Msa0709110 AT4G10510.2 40.604 729 386 14 65 778 1 697 1.21e-153 465
Msa0709110 AT4G10510.3 39.529 764 414 15 30 778 38 768 1.35e-153 467
Msa0709110 AT4G10510.4 40.548 730 387 14 64 778 15 712 2.58e-153 464
Msa0709110 AT5G59130.4 37.644 781 419 19 1 775 7 725 5.61e-152 461
Msa0709110 AT1G32940.1 39.142 769 412 17 30 778 33 765 2.03e-151 461
Msa0709110 AT5G67090.1 37.517 749 400 16 7 743 6 698 2.86e-151 460
Msa0709110 AT1G32940.4 40.650 738 377 19 64 778 15 714 8.47e-151 458
Msa0709110 AT1G32940.2 40.650 738 377 19 64 778 15 714 8.47e-151 458
Msa0709110 AT5G59130.3 39.216 714 371 16 65 775 33 686 2.00e-150 456
Msa0709110 AT4G26330.2 39.130 736 400 16 63 779 19 725 4.64e-150 456
Msa0709110 AT5G59130.1 37.644 781 415 20 1 775 7 721 8.82e-150 456
Msa0709110 AT4G21650.1 38.372 774 391 19 30 775 45 760 1.77e-149 456
Msa0709110 AT3G46850.1 39.525 716 381 17 63 775 68 734 3.99e-149 454
Msa0709110 AT5G59130.2 37.516 781 410 19 1 775 7 715 6.37e-149 453
Msa0709110 AT1G32950.1 37.875 800 439 20 1 778 1 764 6.80e-147 449
Msa0709110 AT4G26330.1 38.400 750 400 17 63 779 19 739 3.34e-146 447
Msa0709110 AT1G32950.2 39.918 734 387 18 64 778 15 713 3.53e-146 446
Msa0709110 AT4G10530.1 37.056 788 426 20 7 778 5 738 8.63e-146 446
Msa0709110 AT5G58840.1 37.275 778 403 18 4 775 8 706 8.73e-146 445
Msa0709110 AT5G11940.1 38.411 768 403 18 30 779 41 756 4.29e-145 444
Msa0709110 AT3G46840.1 39.665 716 379 18 63 775 69 734 7.77e-144 441
Msa0709110 AT1G66220.1 37.716 753 403 17 35 775 46 744 1.93e-143 440
Msa0709110 AT5G58830.1 37.260 781 403 21 2 775 5 705 3.31e-143 438
Msa0709110 AT4G21630.1 38.401 763 392 20 35 775 47 753 4.82e-143 439
Msa0709110 AT1G66210.1 37.165 783 428 17 6 775 19 750 2.14e-140 432
Msa0709110 AT5G45640.1 37.500 752 385 20 74 777 39 753 3.08e-139 429
Msa0709110 AT5G58820.1 36.957 782 404 22 1 775 1 700 3.10e-138 425
Msa0709110 AT4G21323.1 38.270 763 397 23 30 773 84 791 8.51e-135 419
Msa0709110 AT4G15040.2 37.209 731 397 17 46 775 16 685 5.09e-133 411
Msa0709110 AT4G15040.1 37.209 731 397 17 46 775 16 685 5.09e-133 411
Msa0709110 AT4G21326.1 37.483 731 388 16 63 778 14 690 3.39e-132 409
Msa0709110 AT4G00230.2 44.954 545 267 11 45 587 55 568 1.42e-129 399
Msa0709110 AT5G03620.2 45.541 527 258 13 66 587 73 575 3.84e-125 387
Msa0709110 AT1G32970.1 34.810 790 428 27 7 778 5 725 9.10e-113 359
Msa0709110 AT1G32940.3 40.690 580 294 16 30 587 33 584 4.13e-112 354
Msa0709110 AT5G58840.3 37.245 588 301 13 4 587 8 531 2.80e-107 339
Msa0709110 AT4G30020.3 35.616 730 392 28 66 746 86 786 1.41e-103 337
Msa0709110 AT4G30020.1 35.616 730 392 28 66 746 86 786 1.41e-103 337
Msa0709110 AT4G30020.4 35.616 730 392 28 66 746 86 786 1.41e-103 337
Msa0709110 AT4G30020.2 35.616 730 392 28 66 746 86 786 1.41e-103 337
Msa0709110 AT2G19170.1 34.884 731 395 26 66 746 86 785 8.80e-102 332
Msa0709110 AT2G19170.2 34.884 731 395 26 66 746 86 785 8.80e-102 332
Msa0709110 AT1G20160.3 40.890 472 251 9 54 516 56 508 5.49e-101 323
Msa0709110 AT2G39850.1 33.824 748 411 27 65 775 65 765 8.71e-100 326
Msa0709110 AT5G44530.1 31.282 780 462 23 40 775 84 833 6.38e-94 312
Msa0709110 AT1G62340.1 33.031 772 447 25 50 775 82 829 1.10e-89 300
Msa0709110 AT1G30600.1 31.400 793 451 22 37 775 73 826 1.56e-89 300
Msa0709110 AT5G44530.2 30.435 805 461 24 40 775 84 858 1.57e-89 301
Msa0709110 AT4G20430.3 31.736 772 429 28 66 778 119 851 2.17e-86 292
Msa0709110 AT4G20430.1 31.736 772 429 28 66 778 119 851 2.17e-86 292
Msa0709110 AT4G21640.1 40.838 382 199 8 4 359 12 392 5.78e-79 269
Msa0709110 AT4G21640.1 39.423 312 169 7 466 775 434 727 3.54e-53 197
Msa0709110 AT5G58840.2 35.010 517 268 13 4 516 8 460 9.10e-77 256
Msa0709110 AT4G20430.2 31.120 768 415 28 66 778 119 827 1.75e-75 262
Msa0709110 AT5G44530.3 30.159 567 334 18 9 530 48 597 3.44e-60 215
Msa0709110 AT1G32980.1 46.667 195 96 4 552 745 3 190 1.73e-42 153
Msa0709110 AT5G59110.1 39.157 166 93 4 612 775 7 166 3.37e-28 112

Find 218 sgRNAs with CRISPR-Local

Find 528 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTACTTTGTAAACTGATTT+TGG 0.102767 5_1:-203898 None:intergenic
ATAGATGGAGTTAGTATTTA+TGG 0.128973 5_1:+202851 Msa0709110:CDS
TTCAAAATCTCTGGCGATTC+AGG 0.136497 5_1:-203316 None:intergenic
ATGGCTTGTCCTCATGTTTC+AGG 0.168815 5_1:+203457 Msa0709110:CDS
TTAGATCCTAAGTTTGTAAA+AGG 0.223600 5_1:+202989 Msa0709110:CDS
GTCATTGCTATCGGTGCTTT+TGG 0.235835 5_1:+202671 Msa0709110:CDS
TTCTGACCAACCCTTCTAAA+AGG 0.246440 5_1:-203970 None:intergenic
GTTTCGTCAGTGTTTGATTA+TGG 0.248239 5_1:+203607 Msa0709110:CDS
AGAAATTGAACTTTCTTGTT+AGG 0.252378 5_1:+203989 Msa0709110:CDS
TTGCTCCATGAGACTGATTT+CGG 0.254962 5_1:+202161 Msa0709110:CDS
CCGGATAGAGTTGGACCTTC+TGG 0.295636 5_1:+203382 Msa0709110:CDS
CTGTCTTTCCGGCCAGATTC+CGG 0.303192 5_1:-202213 None:intergenic
GCGACGGCGGTTGGGGCTAT+AGG 0.308170 5_1:+203154 Msa0709110:CDS
CTTCTAAAAGGCAACATATC+TGG 0.315317 5_1:-203958 None:intergenic
TCGTTGAAACTCTGTCTTTC+CGG 0.324178 5_1:-202224 None:intergenic
TGGTGGGCCGGCTTTAACTC+CGG 0.324774 5_1:+202871 Msa0709110:CDS
TGGGTGGCAACTGTCGGTGC+TGG 0.324799 5_1:+202776 Msa0709110:CDS
TAAAGAGTGGTTCCATAGTT+TGG 0.334291 5_1:+204055 Msa0709110:CDS
CTCATGGAGCAACCCAGTTT+TGG 0.335722 5_1:-202150 None:intergenic
AAAATTGTTGTTTGTGATAG+AGG 0.336225 5_1:+203013 Msa0709110:CDS
TGCTCCATGAGACTGATTTC+GGG 0.336550 5_1:+202162 Msa0709110:CDS
CCTTTCCATTTCGCCGGAAC+AGG 0.345383 5_1:-202260 None:intergenic
GAGTTATTGACACCGGAATC+TGG 0.345879 5_1:+202201 Msa0709110:CDS
CTATAGGTGGCGATGTAATC+AGG 0.370073 5_1:+203170 Msa0709110:CDS
GTTTCTCCGGCAAGTACTTT+GGG 0.370604 5_1:+202467 Msa0709110:CDS
ACTTAGCTCCGATGATCTTC+CGG 0.373993 5_1:-202325 None:intergenic
TTCGGGTCGGATCTTGTTAT+CGG 0.374836 5_1:+202179 Msa0709110:CDS
TGTTTCTCCGGCAAGTACTT+TGG 0.376578 5_1:+202466 Msa0709110:CDS
TGGAAAGGAAGTTGCGTTGC+TGG 0.376863 5_1:+202275 Msa0709110:CDS
TCATCTTCACTTTGTTTAGC+AGG 0.377825 5_1:+202962 Msa0709110:CDS
CCACTGCCGGCATACACAAC+CGG 0.378497 5_1:-202905 None:intergenic
TCGCCGTTTATAAAGTTTGC+TGG 0.380594 5_1:+202534 Msa0709110:CDS
GTTTGGAATTGTGTTGGACT+TGG 0.388656 5_1:-201887 None:intergenic
TTGTCCTCATGTTTCAGGTT+TGG 0.390830 5_1:+203462 Msa0709110:CDS
ATTAATTCAAGAGGTGATAA+AGG 0.393210 5_1:+203037 Msa0709110:CDS
GAAAGCATTGGATCCTGGTT+TGG 0.395245 5_1:+203651 Msa0709110:CDS
CCGTGAACTTGGTCCTGTTC+CGG 0.395385 5_1:+202247 Msa0709110:CDS
ATAGCAGCTGGACTCCAATC+AGG 0.396171 5_1:-203508 None:intergenic
CCAGGATCCAATGCTTTCTC+TGG 0.402079 5_1:-203646 None:intergenic
GAAATTGAACTTTCTTGTTA+GGG 0.404824 5_1:+203990 Msa0709110:CDS
TTGGTCCTGTTCCGGCGAAA+TGG 0.407995 5_1:+202255 Msa0709110:CDS
TGAAGTGTTCGGATTTGTTC+GGG 0.412491 5_1:-202086 None:intergenic
TGAAAGCGGCTCACCCTGAT+TGG 0.413839 5_1:+203494 Msa0709110:CDS
TTCCGGCGACGGCGTGTAAC+CGG 0.415307 5_1:+202306 Msa0709110:CDS
GTCAAACGCCGCAAGTATAT+CGG 0.416875 5_1:-202576 None:intergenic
TTAGCTAATGGGGTGTTTGA+TGG 0.420391 5_1:+203097 Msa0709110:CDS
GTTTATAAAGTTTGCTGGAC+TGG 0.422169 5_1:+202539 Msa0709110:CDS
TTCTTGTTAGGGTACAAACT+AGG 0.423195 5_1:+204001 Msa0709110:CDS
CACGTTCACCAGAGTTTCTC+GGG 0.424552 5_1:+202114 Msa0709110:CDS
TTCCCCATCAGACCAAACTA+TGG 0.425600 5_1:-204067 None:intergenic
GGAAATGGTAAGATTATAGA+TGG 0.428188 5_1:+202836 Msa0709110:CDS
ATCTCTGGCGATTCAGGGTT+AGG 0.440172 5_1:-203310 None:intergenic
TTTGCCTGCGACGGCGGTTG+GGG 0.441786 5_1:+203147 Msa0709110:CDS
CTCTTTACTAAAGAACTTCC+AGG 0.443032 5_1:-204039 None:intergenic
GTGAAGAAAGCAGGTGGGAT+TGG 0.443221 5_1:+203067 Msa0709110:CDS
TGGGGTTAGGCCAGCTCCTG+TGG 0.443521 5_1:+203264 Msa0709110:CDS
ACACGTTCACCAGAGTTTCT+CGG 0.443697 5_1:+202113 Msa0709110:CDS
ACATCTGGTTTCAAAATCTC+TGG 0.443825 5_1:-203325 None:intergenic
GCATAACCCAAAGTACTTGC+CGG 0.448364 5_1:-202473 None:intergenic
GTGAAGTGTTCGGATTTGTT+CGG 0.449926 5_1:-202087 None:intergenic
AAGGAACTAGGCTTGGGGTT+AGG 0.450411 5_1:+203251 Msa0709110:CDS
TGTTGGGAAAATGGATGGTT+TGG 0.450780 5_1:-201904 None:intergenic
AAACCAGGTGCAATAACATC+TGG 0.452217 5_1:-203340 None:intergenic
TTTCCTGCTGATGTGAAGCT+TGG 0.455922 5_1:+202815 Msa0709110:CDS
ACAGTTACCACCATTCCTTC+AGG 0.457166 5_1:-203931 None:intergenic
AGTTTCAACGACCGTGAACT+TGG 0.463242 5_1:+202236 Msa0709110:CDS
GGTGGGCCGGCTTTAACTCC+GGG 0.464135 5_1:+202872 Msa0709110:CDS
TTTCCAAGCTTCACATCAGC+AGG 0.464733 5_1:-202818 None:intergenic
GTTTGAATATTCTAGCTGCT+TGG 0.465948 5_1:+203359 Msa0709110:CDS
CCAGAGAAAGCATTGGATCC+TGG 0.466875 5_1:+203646 Msa0709110:CDS
TAAAGGTGTCGCCGCCGGTA+TGG 0.467803 5_1:+202496 Msa0709110:CDS
GGTGAAGTGGTGAAGAAAGC+AGG 0.469914 5_1:+203058 Msa0709110:CDS
TCAGTGTTTGATTATGGAGC+TGG 0.470094 5_1:+203613 Msa0709110:CDS
GGTTCCATAGTTTGGTCTGA+TGG 0.470546 5_1:+204063 Msa0709110:CDS
TAAACGGCGAGACGAGCCTT+CGG 0.470739 5_1:-202521 None:intergenic
GTTCCATAGTTTGGTCTGAT+GGG 0.475454 5_1:+204064 Msa0709110:CDS
AGAATAATGAGGTAAGGAAA+TGG 0.475499 5_1:-201798 None:intergenic
AGTCCAGCAAACTTTATAAA+CGG 0.479851 5_1:-202537 None:intergenic
TTGTTGCATTGTCACAACTA+AGG 0.482499 5_1:-204106 None:intergenic
AGAGCTGATTTAATAGCAGC+TGG 0.482528 5_1:-203520 None:intergenic
TGTTGAGAAACCGTGGAAAA+CGG 0.483108 5_1:-202003 None:intergenic
GGCAGTGGCGAACACGGTGG+TGG 0.486765 5_1:+202920 Msa0709110:CDS
AATAAGAGAATAATGAGGTA+AGG 0.488209 5_1:-201804 None:intergenic
AGTACTTTGGGTTATGCTAA+AGG 0.488690 5_1:+202479 Msa0709110:CDS
GCAGTGCTTCTGATCATAGA+AGG 0.490770 5_1:+203404 Msa0709110:CDS
CAATGTTGGATGAATCTAAC+GGG 0.492325 5_1:+203581 Msa0709110:CDS
GAATATTCTAGCTGCTTGGC+CGG 0.494528 5_1:+203363 Msa0709110:CDS
CGCCGCCGGTATGGCTCCGA+AGG 0.495754 5_1:+202505 Msa0709110:CDS
TCAAAATCTCTGGCGATTCA+GGG 0.496443 5_1:-203315 None:intergenic
AATGATGCCACCACAGGAGC+TGG 0.499558 5_1:-203274 None:intergenic
GCTGATGTGAAGCTTGGAAA+TGG 0.500177 5_1:+202821 Msa0709110:CDS
AACTCCGGGTCGGATGTACC+CGG 0.506060 5_1:+202886 Msa0709110:CDS
AATGGGGTGTTTGATGGTGA+AGG 0.506130 5_1:+203103 Msa0709110:CDS
TCAGCTGGTAACGGTGGACC+AGG 0.506449 5_1:+202725 Msa0709110:CDS
GGCGAACACGGTGGTGGAGA+AGG 0.507383 5_1:+202926 Msa0709110:CDS
ATGTACCCGGTTGTGTATGC+CGG 0.514265 5_1:+202899 Msa0709110:CDS
CACACTGCTTCAATCGCCGC+CGG 0.515171 5_1:+202437 Msa0709110:CDS
GGGTGGCAACTGTCGGTGCT+GGG 0.515501 5_1:+202777 Msa0709110:CDS
CCAGAAGGTCCAACTCTATC+CGG 0.517170 5_1:-203382 None:intergenic
AAACCAGATGTTATTGCACC+TGG 0.520135 5_1:+203337 Msa0709110:CDS
TGGATGGTTTGGAATTGTGT+TGG 0.520447 5_1:-201893 None:intergenic
TTGGTAACGGTGAGCCCACC+TGG 0.520512 5_1:-202743 None:intergenic
CCGGAACAGGACCAAGTTCA+CGG 0.520905 5_1:-202247 None:intergenic
ACCACCGTGTTCGCCACTGC+CGG 0.521687 5_1:-202918 None:intergenic
ATAGCCCCAACCGCCGTCGC+AGG 0.523439 5_1:-203151 None:intergenic
CGCCGGGAGATATGTTTCTC+CGG 0.523989 5_1:+202454 Msa0709110:CDS
CATCTTGACGTCATTGCTAT+CGG 0.524712 5_1:+202662 Msa0709110:CDS
GTTTCGGCATCAGCTGGTAA+CGG 0.527171 5_1:+202716 Msa0709110:CDS
AATTAATCCACCTGAAGGAA+TGG 0.527523 5_1:+203921 Msa0709110:CDS
CCGGTTGTGTATGCCGGCAG+TGG 0.528415 5_1:+202905 Msa0709110:CDS
AAATTGTTGTTTGTGATAGA+GGG 0.528857 5_1:+203014 Msa0709110:CDS
ATCGGAGCTAAGTATTTCTC+CGG 0.529207 5_1:+202335 Msa0709110:CDS
ACTGAATTCAACATATTATC+CGG 0.529906 5_1:+203427 Msa0709110:CDS
AGGACAAGCCATCGATGTAC+CGG 0.530641 5_1:-203446 None:intergenic
TTTGACGCCGCCGTGGCTGA+CGG 0.530762 5_1:+202593 Msa0709110:CDS
TCTTGTTAGGGTACAAACTA+GGG 0.531114 5_1:+204002 Msa0709110:CDS
ATTAGGACTGTGACAAATGT+TGG 0.531327 5_1:+203871 Msa0709110:CDS
TTCCGGTTACACGCCGTCGC+CGG 0.531453 5_1:-202308 None:intergenic
TGTTGCATTGTCACAACTAA+GGG 0.532105 5_1:-204105 None:intergenic
CAACTTCCTTTCCATTTCGC+CGG 0.532654 5_1:-202266 None:intergenic
CACTGCCGGCATACACAACC+GGG 0.534528 5_1:-202904 None:intergenic
AGGGAAGTTAAGCTTTCACC+TGG 0.538335 5_1:+204021 Msa0709110:CDS
TTGTGTGTTGGGAAAATGGA+TGG 0.542767 5_1:-201909 None:intergenic
ACGAGCCTTCGGAGCCATAC+CGG 0.543118 5_1:-202510 None:intergenic
CCGACCCGAAATCAGTCTCA+TGG 0.544909 5_1:-202166 None:intergenic
TGCCACCCACGGAGCTACAT+TGG 0.548563 5_1:-202762 None:intergenic
AACGTGTTGTGTGAAGTGTT+CGG 0.549477 5_1:-202097 None:intergenic
GCTCCGTGGGTGGCAACTGT+CGG 0.551560 5_1:+202770 Msa0709110:CDS
GCTAGAGACTCCGACGGACA+TGG 0.553623 5_1:+202410 Msa0709110:CDS
CCGTTAGATTCATCCAACAT+TGG 0.553821 5_1:-203580 None:intergenic
TTCCATAGTTTGGTCTGATG+GGG 0.556047 5_1:+204065 Msa0709110:CDS
GGAAGTTCTTTAGTAAAGAG+TGG 0.556217 5_1:+204042 Msa0709110:CDS
GGAAAGGAAGTTGCGTTGCT+GGG 0.557635 5_1:+202276 Msa0709110:CDS
CGTTTCATTCATCTTCCCGC+TGG 0.558442 5_1:-202372 None:intergenic
TAACAAAGGCGATCCAATGT+TGG 0.558965 5_1:+203567 Msa0709110:CDS
GCTGCTTGGCCGGATAGAGT+TGG 0.560678 5_1:+203373 Msa0709110:CDS
GAAGTGGTGAAGAAAGCAGG+TGG 0.561315 5_1:+203061 Msa0709110:CDS
ATGGGGTGTTTGATGGTGAA+GGG 0.561537 5_1:+203104 Msa0709110:CDS
ATCCGACCCGGAGTTAAAGC+CGG 0.562076 5_1:-202878 None:intergenic
CGTTACCAATGTAGCTCCGT+GGG 0.563670 5_1:+202757 Msa0709110:CDS
TGCCGGAGAAACATATCTCC+CGG 0.564587 5_1:-202456 None:intergenic
CCGCCGTCGCAGGCAAAACG+TGG 0.566343 5_1:-203141 None:intergenic
AGTTAGTATTTATGGTGGGC+CGG 0.566509 5_1:+202859 Msa0709110:CDS
TATTGACACCGGAATCTGGC+CGG 0.566660 5_1:+202205 Msa0709110:CDS
ACGGCGGTTGGGGCTATAGG+TGG 0.566702 5_1:+203157 Msa0709110:CDS
GACGTGGTTTCTCTCAGTGT+CGG 0.572392 5_1:+202620 Msa0709110:CDS
CACGTCAACACCGTCAGCCA+CGG 0.573513 5_1:-202603 None:intergenic
GCACCGACAGTTGCCACCCA+CGG 0.575320 5_1:-202773 None:intergenic
TCAAAAGAACACTAATCAAG+AGG 0.575754 5_1:-204129 None:intergenic
TGATGGTGAAGGGTTAGTAG+CGG 0.577180 5_1:+203114 Msa0709110:CDS
ATCAGGAGTTACATCGCCGA+TGG 0.577470 5_1:+203187 Msa0709110:CDS
AAGAGGTGATAAAGGTGAAG+TGG 0.578130 5_1:+203045 Msa0709110:CDS
GCGTGTAACCGGAAGATCAT+CGG 0.579330 5_1:+202317 Msa0709110:CDS
GCTGAGAATGATGCCACCAC+AGG 0.579599 5_1:-203280 None:intergenic
GGTTAGGCCAGCTCCTGTGG+TGG 0.582134 5_1:+203267 Msa0709110:CDS
CGATAGCAATGACGTCAAGA+TGG 0.582674 5_1:-202661 None:intergenic
ACACTGCTTCAATCGCCGCC+GGG 0.583061 5_1:+202438 Msa0709110:CDS
GTTACCACCATTCCTTCAGG+TGG 0.583486 5_1:-203928 None:intergenic
TTTGGCCGCTTTGTTGAAAG+CGG 0.583834 5_1:+203480 Msa0709110:CDS
GGCCGGCTTTAACTCCGGGT+CGG 0.586046 5_1:+202876 Msa0709110:CDS
CATATTATCCGGTACATCGA+TGG 0.586158 5_1:+203438 Msa0709110:CDS
TGTTCATCCAGAGAAAGCAT+TGG 0.588535 5_1:+203639 Msa0709110:CDS
CCTGTTCCGGCGAAATGGAA+AGG 0.589843 5_1:+202260 Msa0709110:CDS
TGTGTGGATAATGTTGTTTG+AGG 0.592167 5_1:-201973 None:intergenic
GTGTTGGACTTGGATTATGA+AGG 0.593231 5_1:-201877 None:intergenic
GCTGGTAACGGTGGACCAGG+TGG 0.593397 5_1:+202728 Msa0709110:CDS
AGAAGAATAAGAGAATAATG+AGG 0.595660 5_1:-201809 None:intergenic
CTGGTAACGGTGGACCAGGT+GGG 0.596037 5_1:+202729 Msa0709110:CDS
GTGGCATCATTCTCAGCGAG+AGG 0.596798 5_1:+203286 Msa0709110:CDS
GATGGAGTTAGTATTTATGG+TGG 0.603570 5_1:+202854 Msa0709110:CDS
GCGGGTATGAAGCTACCAGC+GGG 0.605724 5_1:+202357 Msa0709110:CDS
CGAATATTAAAGTGATCACA+AGG 0.606008 5_1:+203734 Msa0709110:CDS
GTTATCGGAGTTATTGACAC+CGG 0.606424 5_1:+202194 Msa0709110:CDS
GTAACAATTAATCCACCTGA+AGG 0.607245 5_1:+203916 Msa0709110:CDS
TAGCAGCTGGACTCCAATCA+GGG 0.607652 5_1:-203507 None:intergenic
CCGTTACCAATGTAGCTCCG+TGG 0.610876 5_1:+202756 Msa0709110:CDS
TATGCTAAAGGTGTCGCCGC+CGG 0.611317 5_1:+202491 Msa0709110:CDS
GAGCTAAGTATTTCTCCGGC+GGG 0.611662 5_1:+202339 Msa0709110:CDS
GCAATGACGTCAAGATGGTA+CGG 0.611844 5_1:-202656 None:intergenic
AAGTGGTGAAGAAAGCAGGT+GGG 0.612776 5_1:+203062 Msa0709110:CDS
TACCAATGTAGCTCCGTGGG+TGG 0.616817 5_1:+202760 Msa0709110:CDS
GATCACTTTAATATTCGTTG+TGG 0.617109 5_1:-203728 None:intergenic
TGATCAGAAGCACTGCCAGA+AGG 0.620979 5_1:-203397 None:intergenic
TAATCCACCTGAAGGAATGG+TGG 0.621333 5_1:+203924 Msa0709110:CDS
ATGGAGTTAGTATTTATGGT+GGG 0.622671 5_1:+202855 Msa0709110:CDS
CGGGTATTATAGTGATAACG+TGG 0.626296 5_1:-202067 None:intergenic
CCATGAGACTGATTTCGGGT+CGG 0.631259 5_1:+202166 Msa0709110:CDS
GGTGGTGGAGAAGGTGGTGA+TGG 0.631920 5_1:+202935 Msa0709110:CDS
TGACCGCGACTTAACTCCAT+CGG 0.635274 5_1:-203203 None:intergenic
CCACGGAGCTACATTGGTAA+CGG 0.635502 5_1:-202756 None:intergenic
TATGCCGGCAGTGGCGAACA+CGG 0.635664 5_1:+202914 Msa0709110:CDS
TGGCATCATTCTCAGCGAGA+GGG 0.635777 5_1:+203287 Msa0709110:CDS
GCTTATACTGTCGATAACAA+AGG 0.636387 5_1:+203553 Msa0709110:CDS
GGAAGTAGAATGTGTGAGTG+TGG 0.636962 5_1:-201838 None:intergenic
CCAATGTTGGATGAATCTAA+CGG 0.638286 5_1:+203580 Msa0709110:CDS
TATAAAGTTTGCTGGACTGG+TGG 0.639710 5_1:+202542 Msa0709110:CDS
CGTGGCTGACGGTGTTGACG+TGG 0.640024 5_1:+202604 Msa0709110:CDS
GGAGCTAAGTATTTCTCCGG+CGG 0.640265 5_1:+202338 Msa0709110:CDS
GGAAAACGGTGTCGTATGTG+TGG 0.640792 5_1:-201989 None:intergenic
TGCGGCGTTTGACGCCGCCG+TGG 0.641394 5_1:+202586 Msa0709110:CDS
AGTGTGAGTTCCATGTCCGT+CGG 0.641640 5_1:-202420 None:intergenic
GCTGGTAGCTTCATACCCGC+CGG 0.643476 5_1:-202354 None:intergenic
GAACACGGTGGTGGAGAAGG+TGG 0.651223 5_1:+202929 Msa0709110:CDS
TCGGCATCAGCTGGTAACGG+TGG 0.652966 5_1:+202719 Msa0709110:CDS
GAAATATCATAAACCAAACC+AGG 0.653910 5_1:-203664 None:intergenic
GATAGAGGGATTAATTCAAG+AGG 0.657031 5_1:+203028 Msa0709110:CDS
GCAGCTAGAATATTCAAACC+AGG 0.671068 5_1:-203355 None:intergenic
GTGGTTTCTCTCAGTGTCGG+TGG 0.673775 5_1:+202623 Msa0709110:CDS
GCGGCCAAACCTGAAACATG+AGG 0.675960 5_1:-203466 None:intergenic
GGCGGGTATGAAGCTACCAG+CGG 0.685036 5_1:+202356 Msa0709110:CDS
GTGAGCCGCTTTCAACAAAG+CGG 0.694695 5_1:-203485 None:intergenic
GTCAACACCGTCAGCCACGG+CGG 0.695909 5_1:-202600 None:intergenic
TCGCCGATGGAGTTAAGTCG+CGG 0.701018 5_1:+203200 Msa0709110:CDS
GCCGGCAGTGGCGAACACGG+TGG 0.714846 5_1:+202917 Msa0709110:CDS
AGCCTTCGGAGCCATACCGG+CGG 0.717546 5_1:-202507 None:intergenic
ACAACCGGGTACATCCGACC+CGG 0.718196 5_1:-202890 None:intergenic
CGTTCTGCTAGAGACTCCGA+CGG 0.719126 5_1:+202404 Msa0709110:CDS
CGGAGAAACATATCTCCCGG+CGG 0.768710 5_1:-202453 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTCCTTTTACAAACTT+AGG - chr5_1:202998-203017 None:intergenic 20.0%
!!! AAATGTCTACACATTTTATT+AGG + chr5_1:203854-203873 Msa0709110:CDS 20.0%
!!! TTACTTTGTAAACTGATTTT+GGG - chr5_1:203900-203919 None:intergenic 20.0%
!!! ATTTTTCCTTTTACAAACTT+AGG - chr5_1:202998-203017 None:intergenic 20.0%
!!! AAATGTCTACACATTTTATT+AGG + chr5_1:203854-203873 Msa0709110:CDS 20.0%
!!! TTACTTTGTAAACTGATTTT+GGG - chr5_1:203900-203919 None:intergenic 20.0%
! AATAAGAGAATAATGAGGTA+AGG - chr5_1:201807-201826 None:intergenic 25.0%
! AGAAGAATAAGAGAATAATG+AGG - chr5_1:201812-201831 None:intergenic 25.0%
!!! TTATGAAGGTTTGTTTTTGT+GGG - chr5_1:201866-201885 None:intergenic 25.0%
!!! ATTATGAAGGTTTGTTTTTG+TGG - chr5_1:201867-201886 None:intergenic 25.0%
! ATAGATGGAGTTAGTATTTA+TGG + chr5_1:202851-202870 Msa0709110:CDS 25.0%
! TTAGATCCTAAGTTTGTAAA+AGG + chr5_1:202989-203008 Msa0709110:CDS 25.0%
!!! AAAATTGTTGTTTGTGATAG+AGG + chr5_1:203013-203032 Msa0709110:CDS 25.0%
!!! AAATTGTTGTTTGTGATAGA+GGG + chr5_1:203014-203033 Msa0709110:CDS 25.0%
! ATTAATTCAAGAGGTGATAA+AGG + chr5_1:203037-203056 Msa0709110:CDS 25.0%
!!! ATTGGTATGATTTTAGCTAA+TGG + chr5_1:203085-203104 Msa0709110:CDS 25.0%
!!! TTGGTATGATTTTAGCTAAT+GGG + chr5_1:203086-203105 Msa0709110:CDS 25.0%
!!! CTATTGTTTTTAAAGGAACT+AGG + chr5_1:203239-203258 Msa0709110:CDS 25.0%
! ACTGAATTCAACATATTATC+CGG + chr5_1:203427-203446 Msa0709110:CDS 25.0%
!!! GTTACTTTGTAAACTGATTT+TGG - chr5_1:203901-203920 None:intergenic 25.0%
! AGAAATTGAACTTTCTTGTT+AGG + chr5_1:203989-204008 Msa0709110:CDS 25.0%
! GAAATTGAACTTTCTTGTTA+GGG + chr5_1:203990-204009 Msa0709110:CDS 25.0%
! AATAAGAGAATAATGAGGTA+AGG - chr5_1:201807-201826 None:intergenic 25.0%
! AGAAGAATAAGAGAATAATG+AGG - chr5_1:201812-201831 None:intergenic 25.0%
!!! TTATGAAGGTTTGTTTTTGT+GGG - chr5_1:201866-201885 None:intergenic 25.0%
!!! ATTATGAAGGTTTGTTTTTG+TGG - chr5_1:201867-201886 None:intergenic 25.0%
! ATAGATGGAGTTAGTATTTA+TGG + chr5_1:202851-202870 Msa0709110:CDS 25.0%
! TTAGATCCTAAGTTTGTAAA+AGG + chr5_1:202989-203008 Msa0709110:CDS 25.0%
!!! AAAATTGTTGTTTGTGATAG+AGG + chr5_1:203013-203032 Msa0709110:CDS 25.0%
!!! AAATTGTTGTTTGTGATAGA+GGG + chr5_1:203014-203033 Msa0709110:CDS 25.0%
! ATTAATTCAAGAGGTGATAA+AGG + chr5_1:203037-203056 Msa0709110:CDS 25.0%
!!! ATTGGTATGATTTTAGCTAA+TGG + chr5_1:203085-203104 Msa0709110:CDS 25.0%
!!! TTGGTATGATTTTAGCTAAT+GGG + chr5_1:203086-203105 Msa0709110:CDS 25.0%
!!! CTATTGTTTTTAAAGGAACT+AGG + chr5_1:203239-203258 Msa0709110:CDS 25.0%
! ACTGAATTCAACATATTATC+CGG + chr5_1:203427-203446 Msa0709110:CDS 25.0%
!!! GTTACTTTGTAAACTGATTT+TGG - chr5_1:203901-203920 None:intergenic 25.0%
! AGAAATTGAACTTTCTTGTT+AGG + chr5_1:203989-204008 Msa0709110:CDS 25.0%
! GAAATTGAACTTTCTTGTTA+GGG + chr5_1:203990-204009 Msa0709110:CDS 25.0%
AGAATAATGAGGTAAGGAAA+TGG - chr5_1:201801-201820 None:intergenic 30.0%
!!! TATGAAGGTTTGTTTTTGTG+GGG - chr5_1:201865-201884 None:intergenic 30.0%
! ATTTTTGTGTGTTGGGAAAA+TGG - chr5_1:201916-201935 None:intergenic 30.0%
! TTTTCCCAACACACAAAAAT+TGG + chr5_1:201916-201935 Msa0709110:CDS 30.0%
AGTCCAGCAAACTTTATAAA+CGG - chr5_1:202540-202559 None:intergenic 30.0%
GGAAATGGTAAGATTATAGA+TGG + chr5_1:202836-202855 Msa0709110:CDS 30.0%
ATGGAGTTAGTATTTATGGT+GGG + chr5_1:202855-202874 Msa0709110:CDS 30.0%
!!! TGGTATGATTTTAGCTAATG+GGG + chr5_1:203087-203106 Msa0709110:CDS 30.0%
! TCCTTTAAAAACAATAGTCG+CGG - chr5_1:203236-203255 None:intergenic 30.0%
!! TTTTTAAAGGAACTAGGCTT+GGG + chr5_1:203245-203264 Msa0709110:CDS 30.0%
GAAATATCATAAACCAAACC+AGG - chr5_1:203667-203686 None:intergenic 30.0%
GATCACTTTAATATTCGTTG+TGG - chr5_1:203731-203750 None:intergenic 30.0%
CGAATATTAAAGTGATCACA+AGG + chr5_1:203734-203753 Msa0709110:CDS 30.0%
TGTAGTAATGCTAAAAAAGC+AGG + chr5_1:203769-203788 Msa0709110:CDS 30.0%
TGAAAAACTGCAGATAATGT+TGG - chr5_1:203817-203836 None:intergenic 30.0%
!! TCTGCAGTTTTTCAACAATA+TGG + chr5_1:203823-203842 Msa0709110:CDS 30.0%
!! AGATATGTTGCCTTTTAGAA+GGG + chr5_1:203960-203979 Msa0709110:CDS 30.0%
AGAATAATGAGGTAAGGAAA+TGG - chr5_1:201801-201820 None:intergenic 30.0%
!!! TATGAAGGTTTGTTTTTGTG+GGG - chr5_1:201865-201884 None:intergenic 30.0%
! ATTTTTGTGTGTTGGGAAAA+TGG - chr5_1:201916-201935 None:intergenic 30.0%
! TTTTCCCAACACACAAAAAT+TGG + chr5_1:201916-201935 Msa0709110:CDS 30.0%
AGTCCAGCAAACTTTATAAA+CGG - chr5_1:202540-202559 None:intergenic 30.0%
GGAAATGGTAAGATTATAGA+TGG + chr5_1:202836-202855 Msa0709110:CDS 30.0%
ATGGAGTTAGTATTTATGGT+GGG + chr5_1:202855-202874 Msa0709110:CDS 30.0%
!!! TGGTATGATTTTAGCTAATG+GGG + chr5_1:203087-203106 Msa0709110:CDS 30.0%
! TCCTTTAAAAACAATAGTCG+CGG - chr5_1:203236-203255 None:intergenic 30.0%
!! TTTTTAAAGGAACTAGGCTT+GGG + chr5_1:203245-203264 Msa0709110:CDS 30.0%
GAAATATCATAAACCAAACC+AGG - chr5_1:203667-203686 None:intergenic 30.0%
GATCACTTTAATATTCGTTG+TGG - chr5_1:203731-203750 None:intergenic 30.0%
CGAATATTAAAGTGATCACA+AGG + chr5_1:203734-203753 Msa0709110:CDS 30.0%
TGTAGTAATGCTAAAAAAGC+AGG + chr5_1:203769-203788 Msa0709110:CDS 30.0%
TGAAAAACTGCAGATAATGT+TGG - chr5_1:203817-203836 None:intergenic 30.0%
!! TCTGCAGTTTTTCAACAATA+TGG + chr5_1:203823-203842 Msa0709110:CDS 30.0%
!! AGATATGTTGCCTTTTAGAA+GGG + chr5_1:203960-203979 Msa0709110:CDS 30.0%
! CGTACCAATTTTTGTGTGTT+GGG - chr5_1:201923-201942 None:intergenic 35.0%
! TCGTACCAATTTTTGTGTGT+TGG - chr5_1:201924-201943 None:intergenic 35.0%
! TTTTGTGATTGATGAGAGTG+AGG - chr5_1:201949-201968 None:intergenic 35.0%
! TGTGTGGATAATGTTGTTTG+AGG - chr5_1:201976-201995 None:intergenic 35.0%
!!! TTAGTTTTGTTGAGAAACCG+TGG - chr5_1:202013-202032 None:intergenic 35.0%
! AGTACTTTGGGTTATGCTAA+AGG + chr5_1:202479-202498 Msa0709110:CDS 35.0%
!! GTTTATAAAGTTTGCTGGAC+TGG + chr5_1:202539-202558 Msa0709110:CDS 35.0%
!! TTTTGACTCCGATATACTTG+CGG + chr5_1:202568-202587 Msa0709110:CDS 35.0%
GATGGAGTTAGTATTTATGG+TGG + chr5_1:202854-202873 Msa0709110:CDS 35.0%
! TCATCTTCACTTTGTTTAGC+AGG + chr5_1:202962-202981 Msa0709110:CDS 35.0%
GATAGAGGGATTAATTCAAG+AGG + chr5_1:203028-203047 Msa0709110:CDS 35.0%
TTAAAAACAATAGTCGCGGT+TGG - chr5_1:203232-203251 None:intergenic 35.0%
!!! ACCGCGACTATTGTTTTTAA+AGG + chr5_1:203232-203251 Msa0709110:CDS 35.0%
!! GTTTTTAAAGGAACTAGGCT+TGG + chr5_1:203244-203263 Msa0709110:CDS 35.0%
!! TTTTAAAGGAACTAGGCTTG+GGG + chr5_1:203246-203265 Msa0709110:CDS 35.0%
! ACATCTGGTTTCAAAATCTC+TGG - chr5_1:203328-203347 None:intergenic 35.0%
! GTTTGAATATTCTAGCTGCT+TGG + chr5_1:203359-203378 Msa0709110:CDS 35.0%
GCTTATACTGTCGATAACAA+AGG + chr5_1:203553-203572 Msa0709110:CDS 35.0%
CCAATGTTGGATGAATCTAA+CGG + chr5_1:203580-203599 Msa0709110:CDS 35.0%
CAATGTTGGATGAATCTAAC+GGG + chr5_1:203581-203600 Msa0709110:CDS 35.0%
GTTTCGTCAGTGTTTGATTA+TGG + chr5_1:203607-203626 Msa0709110:CDS 35.0%
ATTAGGACTGTGACAAATGT+TGG + chr5_1:203871-203890 Msa0709110:CDS 35.0%
GTAACAATTAATCCACCTGA+AGG + chr5_1:203916-203935 Msa0709110:CDS 35.0%
AATTAATCCACCTGAAGGAA+TGG + chr5_1:203921-203940 Msa0709110:CDS 35.0%
! CTTCTAAAAGGCAACATATC+TGG - chr5_1:203961-203980 None:intergenic 35.0%
! CAGATATGTTGCCTTTTAGA+AGG + chr5_1:203959-203978 Msa0709110:CDS 35.0%
TTCTTGTTAGGGTACAAACT+AGG + chr5_1:204001-204020 Msa0709110:CDS 35.0%
TCTTGTTAGGGTACAAACTA+GGG + chr5_1:204002-204021 Msa0709110:CDS 35.0%
CTCTTTACTAAAGAACTTCC+AGG - chr5_1:204042-204061 None:intergenic 35.0%
GGAAGTTCTTTAGTAAAGAG+TGG + chr5_1:204042-204061 Msa0709110:CDS 35.0%
TAAAGAGTGGTTCCATAGTT+TGG + chr5_1:204055-204074 Msa0709110:CDS 35.0%
TGTTGCATTGTCACAACTAA+GGG - chr5_1:204108-204127 None:intergenic 35.0%
TTGTTGCATTGTCACAACTA+AGG - chr5_1:204109-204128 None:intergenic 35.0%
! CGTACCAATTTTTGTGTGTT+GGG - chr5_1:201923-201942 None:intergenic 35.0%
! TCGTACCAATTTTTGTGTGT+TGG - chr5_1:201924-201943 None:intergenic 35.0%
! TTTTGTGATTGATGAGAGTG+AGG - chr5_1:201949-201968 None:intergenic 35.0%
! TGTGTGGATAATGTTGTTTG+AGG - chr5_1:201976-201995 None:intergenic 35.0%
!!! TTAGTTTTGTTGAGAAACCG+TGG - chr5_1:202013-202032 None:intergenic 35.0%
! AGTACTTTGGGTTATGCTAA+AGG + chr5_1:202479-202498 Msa0709110:CDS 35.0%
!! GTTTATAAAGTTTGCTGGAC+TGG + chr5_1:202539-202558 Msa0709110:CDS 35.0%
!! TTTTGACTCCGATATACTTG+CGG + chr5_1:202568-202587 Msa0709110:CDS 35.0%
GATGGAGTTAGTATTTATGG+TGG + chr5_1:202854-202873 Msa0709110:CDS 35.0%
! TCATCTTCACTTTGTTTAGC+AGG + chr5_1:202962-202981 Msa0709110:CDS 35.0%
GATAGAGGGATTAATTCAAG+AGG + chr5_1:203028-203047 Msa0709110:CDS 35.0%
TTAAAAACAATAGTCGCGGT+TGG - chr5_1:203232-203251 None:intergenic 35.0%
!!! ACCGCGACTATTGTTTTTAA+AGG + chr5_1:203232-203251 Msa0709110:CDS 35.0%
!! GTTTTTAAAGGAACTAGGCT+TGG + chr5_1:203244-203263 Msa0709110:CDS 35.0%
!! TTTTAAAGGAACTAGGCTTG+GGG + chr5_1:203246-203265 Msa0709110:CDS 35.0%
! ACATCTGGTTTCAAAATCTC+TGG - chr5_1:203328-203347 None:intergenic 35.0%
! GTTTGAATATTCTAGCTGCT+TGG + chr5_1:203359-203378 Msa0709110:CDS 35.0%
GCTTATACTGTCGATAACAA+AGG + chr5_1:203553-203572 Msa0709110:CDS 35.0%
CCAATGTTGGATGAATCTAA+CGG + chr5_1:203580-203599 Msa0709110:CDS 35.0%
CAATGTTGGATGAATCTAAC+GGG + chr5_1:203581-203600 Msa0709110:CDS 35.0%
GTTTCGTCAGTGTTTGATTA+TGG + chr5_1:203607-203626 Msa0709110:CDS 35.0%
ATTAGGACTGTGACAAATGT+TGG + chr5_1:203871-203890 Msa0709110:CDS 35.0%
GTAACAATTAATCCACCTGA+AGG + chr5_1:203916-203935 Msa0709110:CDS 35.0%
AATTAATCCACCTGAAGGAA+TGG + chr5_1:203921-203940 Msa0709110:CDS 35.0%
! CTTCTAAAAGGCAACATATC+TGG - chr5_1:203961-203980 None:intergenic 35.0%
! CAGATATGTTGCCTTTTAGA+AGG + chr5_1:203959-203978 Msa0709110:CDS 35.0%
TTCTTGTTAGGGTACAAACT+AGG + chr5_1:204001-204020 Msa0709110:CDS 35.0%
TCTTGTTAGGGTACAAACTA+GGG + chr5_1:204002-204021 Msa0709110:CDS 35.0%
CTCTTTACTAAAGAACTTCC+AGG - chr5_1:204042-204061 None:intergenic 35.0%
GGAAGTTCTTTAGTAAAGAG+TGG + chr5_1:204042-204061 Msa0709110:CDS 35.0%
TAAAGAGTGGTTCCATAGTT+TGG + chr5_1:204055-204074 Msa0709110:CDS 35.0%
TGTTGCATTGTCACAACTAA+GGG - chr5_1:204108-204127 None:intergenic 35.0%
TTGTTGCATTGTCACAACTA+AGG - chr5_1:204109-204128 None:intergenic 35.0%
GTGTTGGACTTGGATTATGA+AGG - chr5_1:201880-201899 None:intergenic 40.0%
! GTTTGGAATTGTGTTGGACT+TGG - chr5_1:201890-201909 None:intergenic 40.0%
! TGGATGGTTTGGAATTGTGT+TGG - chr5_1:201896-201915 None:intergenic 40.0%
TGTTGGGAAAATGGATGGTT+TGG - chr5_1:201907-201926 None:intergenic 40.0%
TTGTGTGTTGGGAAAATGGA+TGG - chr5_1:201912-201931 None:intergenic 40.0%
TGTTGAGAAACCGTGGAAAA+CGG - chr5_1:202006-202025 None:intergenic 40.0%
! CGGGTATTATAGTGATAACG+TGG - chr5_1:202070-202089 None:intergenic 40.0%
! TGAAGTGTTCGGATTTGTTC+GGG - chr5_1:202089-202108 None:intergenic 40.0%
! GTGAAGTGTTCGGATTTGTT+CGG - chr5_1:202090-202109 None:intergenic 40.0%
! AACGTGTTGTGTGAAGTGTT+CGG - chr5_1:202100-202119 None:intergenic 40.0%
! GTTTTTAACCCGAGAAACTC+TGG - chr5_1:202125-202144 None:intergenic 40.0%
! TTGCTCCATGAGACTGATTT+CGG + chr5_1:202161-202180 Msa0709110:CDS 40.0%
GTTATCGGAGTTATTGACAC+CGG + chr5_1:202194-202213 Msa0709110:CDS 40.0%
TCGTTGAAACTCTGTCTTTC+CGG - chr5_1:202227-202246 None:intergenic 40.0%
ATCGGAGCTAAGTATTTCTC+CGG + chr5_1:202335-202354 Msa0709110:CDS 40.0%
TCGCCGTTTATAAAGTTTGC+TGG + chr5_1:202534-202553 Msa0709110:CDS 40.0%
!! TATAAAGTTTGCTGGACTGG+TGG + chr5_1:202542-202561 Msa0709110:CDS 40.0%
CATCTTGACGTCATTGCTAT+CGG + chr5_1:202662-202681 Msa0709110:CDS 40.0%
!! TGATGCCGGAGTTTTTGTTT+CGG + chr5_1:202700-202719 Msa0709110:CDS 40.0%
TGATGCCGAAACAAAAACTC+CGG - chr5_1:202708-202727 None:intergenic 40.0%
!! AGTTAGTATTTATGGTGGGC+CGG + chr5_1:202859-202878 Msa0709110:CDS 40.0%
AAGAGGTGATAAAGGTGAAG+TGG + chr5_1:203045-203064 Msa0709110:CDS 40.0%
! TTAGCTAATGGGGTGTTTGA+TGG + chr5_1:203097-203116 Msa0709110:CDS 40.0%
TCAAAATCTCTGGCGATTCA+GGG - chr5_1:203318-203337 None:intergenic 40.0%
TTCAAAATCTCTGGCGATTC+AGG - chr5_1:203319-203338 None:intergenic 40.0%
AAACCAGATGTTATTGCACC+TGG + chr5_1:203337-203356 Msa0709110:CDS 40.0%
AAACCAGGTGCAATAACATC+TGG - chr5_1:203343-203362 None:intergenic 40.0%
GCAGCTAGAATATTCAAACC+AGG - chr5_1:203358-203377 None:intergenic 40.0%
CATATTATCCGGTACATCGA+TGG + chr5_1:203438-203457 Msa0709110:CDS 40.0%
!! TTGTCCTCATGTTTCAGGTT+TGG + chr5_1:203462-203481 Msa0709110:CDS 40.0%
! AGAGCTGATTTAATAGCAGC+TGG - chr5_1:203523-203542 None:intergenic 40.0%
TAACAAAGGCGATCCAATGT+TGG + chr5_1:203567-203586 Msa0709110:CDS 40.0%
CCGTTAGATTCATCCAACAT+TGG - chr5_1:203583-203602 None:intergenic 40.0%
TCAGTGTTTGATTATGGAGC+TGG + chr5_1:203613-203632 Msa0709110:CDS 40.0%
! TGTTCATCCAGAGAAAGCAT+TGG + chr5_1:203639-203658 Msa0709110:CDS 40.0%
GCTAAAAAAGCAGGACATTC+TGG + chr5_1:203778-203797 Msa0709110:CDS 40.0%
!! ATGTTGCCTTTTAGAAGGGT+TGG + chr5_1:203964-203983 Msa0709110:CDS 40.0%
TTCTGACCAACCCTTCTAAA+AGG - chr5_1:203973-203992 None:intergenic 40.0%
GTTCCATAGTTTGGTCTGAT+GGG + chr5_1:204064-204083 Msa0709110:CDS 40.0%
TTCCATAGTTTGGTCTGATG+GGG + chr5_1:204065-204084 Msa0709110:CDS 40.0%
GTGTTGGACTTGGATTATGA+AGG - chr5_1:201880-201899 None:intergenic 40.0%
! GTTTGGAATTGTGTTGGACT+TGG - chr5_1:201890-201909 None:intergenic 40.0%
! TGGATGGTTTGGAATTGTGT+TGG - chr5_1:201896-201915 None:intergenic 40.0%
TGTTGGGAAAATGGATGGTT+TGG - chr5_1:201907-201926 None:intergenic 40.0%
TTGTGTGTTGGGAAAATGGA+TGG - chr5_1:201912-201931 None:intergenic 40.0%
TGTTGAGAAACCGTGGAAAA+CGG - chr5_1:202006-202025 None:intergenic 40.0%
! CGGGTATTATAGTGATAACG+TGG - chr5_1:202070-202089 None:intergenic 40.0%
! TGAAGTGTTCGGATTTGTTC+GGG - chr5_1:202089-202108 None:intergenic 40.0%
! GTGAAGTGTTCGGATTTGTT+CGG - chr5_1:202090-202109 None:intergenic 40.0%
! AACGTGTTGTGTGAAGTGTT+CGG - chr5_1:202100-202119 None:intergenic 40.0%
! GTTTTTAACCCGAGAAACTC+TGG - chr5_1:202125-202144 None:intergenic 40.0%
! TTGCTCCATGAGACTGATTT+CGG + chr5_1:202161-202180 Msa0709110:CDS 40.0%
GTTATCGGAGTTATTGACAC+CGG + chr5_1:202194-202213 Msa0709110:CDS 40.0%
TCGTTGAAACTCTGTCTTTC+CGG - chr5_1:202227-202246 None:intergenic 40.0%
ATCGGAGCTAAGTATTTCTC+CGG + chr5_1:202335-202354 Msa0709110:CDS 40.0%
TCGCCGTTTATAAAGTTTGC+TGG + chr5_1:202534-202553 Msa0709110:CDS 40.0%
!! TATAAAGTTTGCTGGACTGG+TGG + chr5_1:202542-202561 Msa0709110:CDS 40.0%
CATCTTGACGTCATTGCTAT+CGG + chr5_1:202662-202681 Msa0709110:CDS 40.0%
!! TGATGCCGGAGTTTTTGTTT+CGG + chr5_1:202700-202719 Msa0709110:CDS 40.0%
TGATGCCGAAACAAAAACTC+CGG - chr5_1:202708-202727 None:intergenic 40.0%
!! AGTTAGTATTTATGGTGGGC+CGG + chr5_1:202859-202878 Msa0709110:CDS 40.0%
AAGAGGTGATAAAGGTGAAG+TGG + chr5_1:203045-203064 Msa0709110:CDS 40.0%
! TTAGCTAATGGGGTGTTTGA+TGG + chr5_1:203097-203116 Msa0709110:CDS 40.0%
TCAAAATCTCTGGCGATTCA+GGG - chr5_1:203318-203337 None:intergenic 40.0%
TTCAAAATCTCTGGCGATTC+AGG - chr5_1:203319-203338 None:intergenic 40.0%
AAACCAGATGTTATTGCACC+TGG + chr5_1:203337-203356 Msa0709110:CDS 40.0%
AAACCAGGTGCAATAACATC+TGG - chr5_1:203343-203362 None:intergenic 40.0%
GCAGCTAGAATATTCAAACC+AGG - chr5_1:203358-203377 None:intergenic 40.0%
CATATTATCCGGTACATCGA+TGG + chr5_1:203438-203457 Msa0709110:CDS 40.0%
!! TTGTCCTCATGTTTCAGGTT+TGG + chr5_1:203462-203481 Msa0709110:CDS 40.0%
! AGAGCTGATTTAATAGCAGC+TGG - chr5_1:203523-203542 None:intergenic 40.0%
TAACAAAGGCGATCCAATGT+TGG + chr5_1:203567-203586 Msa0709110:CDS 40.0%
CCGTTAGATTCATCCAACAT+TGG - chr5_1:203583-203602 None:intergenic 40.0%
TCAGTGTTTGATTATGGAGC+TGG + chr5_1:203613-203632 Msa0709110:CDS 40.0%
! TGTTCATCCAGAGAAAGCAT+TGG + chr5_1:203639-203658 Msa0709110:CDS 40.0%
GCTAAAAAAGCAGGACATTC+TGG + chr5_1:203778-203797 Msa0709110:CDS 40.0%
!! ATGTTGCCTTTTAGAAGGGT+TGG + chr5_1:203964-203983 Msa0709110:CDS 40.0%
TTCTGACCAACCCTTCTAAA+AGG - chr5_1:203973-203992 None:intergenic 40.0%
GTTCCATAGTTTGGTCTGAT+GGG + chr5_1:204064-204083 Msa0709110:CDS 40.0%
TTCCATAGTTTGGTCTGATG+GGG + chr5_1:204065-204084 Msa0709110:CDS 40.0%
GGAAGTAGAATGTGTGAGTG+TGG - chr5_1:201841-201860 None:intergenic 45.0%
!!! GAAGGTTTGTTTTTGTGGGG+TGG - chr5_1:201862-201881 None:intergenic 45.0%
! ACATACGACACCGTTTTCCA+CGG + chr5_1:201993-202012 Msa0709110:CDS 45.0%
ACACGTTCACCAGAGTTTCT+CGG + chr5_1:202113-202132 Msa0709110:CDS 45.0%
TTAAAAACCGCCGCCAAAAC+TGG + chr5_1:202137-202156 Msa0709110:CDS 45.0%
TAAAAACCGCCGCCAAAACT+GGG + chr5_1:202138-202157 Msa0709110:CDS 45.0%
! TGCTCCATGAGACTGATTTC+GGG + chr5_1:202162-202181 Msa0709110:CDS 45.0%
! TTCGGGTCGGATCTTGTTAT+CGG + chr5_1:202179-202198 Msa0709110:CDS 45.0%
GAGTTATTGACACCGGAATC+TGG + chr5_1:202201-202220 Msa0709110:CDS 45.0%
AGTTTCAACGACCGTGAACT+TGG + chr5_1:202236-202255 Msa0709110:CDS 45.0%
CAACTTCCTTTCCATTTCGC+CGG - chr5_1:202269-202288 None:intergenic 45.0%
! CGTTGCTGGGAAAGATTTTC+CGG + chr5_1:202289-202308 Msa0709110:CDS 45.0%
ACTTAGCTCCGATGATCTTC+CGG - chr5_1:202328-202347 None:intergenic 45.0%
TGTTTCTCCGGCAAGTACTT+TGG + chr5_1:202466-202485 Msa0709110:CDS 45.0%
GTTTCTCCGGCAAGTACTTT+GGG + chr5_1:202467-202486 Msa0709110:CDS 45.0%
! GCATAACCCAAAGTACTTGC+CGG - chr5_1:202476-202495 None:intergenic 45.0%
GTCAAACGCCGCAAGTATAT+CGG - chr5_1:202579-202598 None:intergenic 45.0%
GCAATGACGTCAAGATGGTA+CGG - chr5_1:202659-202678 None:intergenic 45.0%
CGATAGCAATGACGTCAAGA+TGG - chr5_1:202664-202683 None:intergenic 45.0%
!! GTCATTGCTATCGGTGCTTT+TGG + chr5_1:202671-202690 Msa0709110:CDS 45.0%
!! GTTTTTGTTTCGGCATCAGC+TGG + chr5_1:202710-202729 Msa0709110:CDS 45.0%
TTTCCTGCTGATGTGAAGCT+TGG + chr5_1:202815-202834 Msa0709110:CDS 45.0%
TTTCCAAGCTTCACATCAGC+AGG - chr5_1:202821-202840 None:intergenic 45.0%
GCTGATGTGAAGCTTGGAAA+TGG + chr5_1:202821-202840 Msa0709110:CDS 45.0%
AAGTGGTGAAGAAAGCAGGT+GGG + chr5_1:203062-203081 Msa0709110:CDS 45.0%
!! AATGGGGTGTTTGATGGTGA+AGG + chr5_1:203103-203122 Msa0709110:CDS 45.0%
!! ATGGGGTGTTTGATGGTGAA+GGG + chr5_1:203104-203123 Msa0709110:CDS 45.0%
! TGATGGTGAAGGGTTAGTAG+CGG + chr5_1:203114-203133 Msa0709110:CDS 45.0%
CTATAGGTGGCGATGTAATC+AGG + chr5_1:203170-203189 Msa0709110:CDS 45.0%
! GAATATTCTAGCTGCTTGGC+CGG + chr5_1:203363-203382 Msa0709110:CDS 45.0%
GCAGTGCTTCTGATCATAGA+AGG + chr5_1:203404-203423 Msa0709110:CDS 45.0%
! ATGGCTTGTCCTCATGTTTC+AGG + chr5_1:203457-203476 Msa0709110:CDS 45.0%
! TTTGGCCGCTTTGTTGAAAG+CGG + chr5_1:203480-203499 Msa0709110:CDS 45.0%
!! GAAAGCATTGGATCCTGGTT+TGG + chr5_1:203651-203670 Msa0709110:CDS 45.0%
TAATCCACCTGAAGGAATGG+TGG + chr5_1:203924-203943 Msa0709110:CDS 45.0%
ACAGTTACCACCATTCCTTC+AGG - chr5_1:203934-203953 None:intergenic 45.0%
AGGGAAGTTAAGCTTTCACC+TGG + chr5_1:204021-204040 Msa0709110:CDS 45.0%
GGTTCCATAGTTTGGTCTGA+TGG + chr5_1:204063-204082 Msa0709110:CDS 45.0%
TTCCCCATCAGACCAAACTA+TGG - chr5_1:204070-204089 None:intergenic 45.0%
GGAAGTAGAATGTGTGAGTG+TGG - chr5_1:201841-201860 None:intergenic 45.0%
!!! GAAGGTTTGTTTTTGTGGGG+TGG - chr5_1:201862-201881 None:intergenic 45.0%
! ACATACGACACCGTTTTCCA+CGG + chr5_1:201993-202012 Msa0709110:CDS 45.0%
ACACGTTCACCAGAGTTTCT+CGG + chr5_1:202113-202132 Msa0709110:CDS 45.0%
TTAAAAACCGCCGCCAAAAC+TGG + chr5_1:202137-202156 Msa0709110:CDS 45.0%
TAAAAACCGCCGCCAAAACT+GGG + chr5_1:202138-202157 Msa0709110:CDS 45.0%
! TGCTCCATGAGACTGATTTC+GGG + chr5_1:202162-202181 Msa0709110:CDS 45.0%
! TTCGGGTCGGATCTTGTTAT+CGG + chr5_1:202179-202198 Msa0709110:CDS 45.0%
GAGTTATTGACACCGGAATC+TGG + chr5_1:202201-202220 Msa0709110:CDS 45.0%
AGTTTCAACGACCGTGAACT+TGG + chr5_1:202236-202255 Msa0709110:CDS 45.0%
CAACTTCCTTTCCATTTCGC+CGG - chr5_1:202269-202288 None:intergenic 45.0%
! CGTTGCTGGGAAAGATTTTC+CGG + chr5_1:202289-202308 Msa0709110:CDS 45.0%
ACTTAGCTCCGATGATCTTC+CGG - chr5_1:202328-202347 None:intergenic 45.0%
TGTTTCTCCGGCAAGTACTT+TGG + chr5_1:202466-202485 Msa0709110:CDS 45.0%
GTTTCTCCGGCAAGTACTTT+GGG + chr5_1:202467-202486 Msa0709110:CDS 45.0%
! GCATAACCCAAAGTACTTGC+CGG - chr5_1:202476-202495 None:intergenic 45.0%
GTCAAACGCCGCAAGTATAT+CGG - chr5_1:202579-202598 None:intergenic 45.0%
GCAATGACGTCAAGATGGTA+CGG - chr5_1:202659-202678 None:intergenic 45.0%
CGATAGCAATGACGTCAAGA+TGG - chr5_1:202664-202683 None:intergenic 45.0%
!! GTCATTGCTATCGGTGCTTT+TGG + chr5_1:202671-202690 Msa0709110:CDS 45.0%
!! GTTTTTGTTTCGGCATCAGC+TGG + chr5_1:202710-202729 Msa0709110:CDS 45.0%
TTTCCTGCTGATGTGAAGCT+TGG + chr5_1:202815-202834 Msa0709110:CDS 45.0%
TTTCCAAGCTTCACATCAGC+AGG - chr5_1:202821-202840 None:intergenic 45.0%
GCTGATGTGAAGCTTGGAAA+TGG + chr5_1:202821-202840 Msa0709110:CDS 45.0%
AAGTGGTGAAGAAAGCAGGT+GGG + chr5_1:203062-203081 Msa0709110:CDS 45.0%
!! AATGGGGTGTTTGATGGTGA+AGG + chr5_1:203103-203122 Msa0709110:CDS 45.0%
!! ATGGGGTGTTTGATGGTGAA+GGG + chr5_1:203104-203123 Msa0709110:CDS 45.0%
! TGATGGTGAAGGGTTAGTAG+CGG + chr5_1:203114-203133 Msa0709110:CDS 45.0%
CTATAGGTGGCGATGTAATC+AGG + chr5_1:203170-203189 Msa0709110:CDS 45.0%
! GAATATTCTAGCTGCTTGGC+CGG + chr5_1:203363-203382 Msa0709110:CDS 45.0%
GCAGTGCTTCTGATCATAGA+AGG + chr5_1:203404-203423 Msa0709110:CDS 45.0%
! ATGGCTTGTCCTCATGTTTC+AGG + chr5_1:203457-203476 Msa0709110:CDS 45.0%
! TTTGGCCGCTTTGTTGAAAG+CGG + chr5_1:203480-203499 Msa0709110:CDS 45.0%
!! GAAAGCATTGGATCCTGGTT+TGG + chr5_1:203651-203670 Msa0709110:CDS 45.0%
TAATCCACCTGAAGGAATGG+TGG + chr5_1:203924-203943 Msa0709110:CDS 45.0%
ACAGTTACCACCATTCCTTC+AGG - chr5_1:203934-203953 None:intergenic 45.0%
AGGGAAGTTAAGCTTTCACC+TGG + chr5_1:204021-204040 Msa0709110:CDS 45.0%
GGTTCCATAGTTTGGTCTGA+TGG + chr5_1:204063-204082 Msa0709110:CDS 45.0%
TTCCCCATCAGACCAAACTA+TGG - chr5_1:204070-204089 None:intergenic 45.0%
!! GGAAAACGGTGTCGTATGTG+TGG - chr5_1:201992-202011 None:intergenic 50.0%
CACGTTCACCAGAGTTTCTC+GGG + chr5_1:202114-202133 Msa0709110:CDS 50.0%
!! ATGGAGCAACCCAGTTTTGG+CGG - chr5_1:202150-202169 None:intergenic 50.0%
! CTCATGGAGCAACCCAGTTT+TGG - chr5_1:202153-202172 None:intergenic 50.0%
! CCATGAGACTGATTTCGGGT+CGG + chr5_1:202166-202185 Msa0709110:CDS 50.0%
TATTGACACCGGAATCTGGC+CGG + chr5_1:202205-202224 Msa0709110:CDS 50.0%
TGGAAAGGAAGTTGCGTTGC+TGG + chr5_1:202275-202294 Msa0709110:CDS 50.0%
GGAAAGGAAGTTGCGTTGCT+GGG + chr5_1:202276-202295 Msa0709110:CDS 50.0%
! TGGGAAAGATTTTCCGGCGA+CGG + chr5_1:202295-202314 Msa0709110:CDS 50.0%
GCGTGTAACCGGAAGATCAT+CGG + chr5_1:202317-202336 Msa0709110:CDS 50.0%
GGAGCTAAGTATTTCTCCGG+CGG + chr5_1:202338-202357 Msa0709110:CDS 50.0%
GAGCTAAGTATTTCTCCGGC+GGG + chr5_1:202339-202358 Msa0709110:CDS 50.0%
CGTTTCATTCATCTTCCCGC+TGG - chr5_1:202375-202394 None:intergenic 50.0%
AGTGTGAGTTCCATGTCCGT+CGG - chr5_1:202423-202442 None:intergenic 50.0%
TGCCGGAGAAACATATCTCC+CGG - chr5_1:202459-202478 None:intergenic 50.0%
GACGTGGTTTCTCTCAGTGT+CGG + chr5_1:202620-202639 Msa0709110:CDS 50.0%
!!! GCTTTTGGAGCTTCTGATGC+CGG + chr5_1:202686-202705 Msa0709110:CDS 50.0%
GTTTCGGCATCAGCTGGTAA+CGG + chr5_1:202716-202735 Msa0709110:CDS 50.0%
CCACGGAGCTACATTGGTAA+CGG - chr5_1:202759-202778 None:intergenic 50.0%
CGTTACCAATGTAGCTCCGT+GGG + chr5_1:202757-202776 Msa0709110:CDS 50.0%
ATGTACCCGGTTGTGTATGC+CGG + chr5_1:202899-202918 Msa0709110:CDS 50.0%
GGTGAAGTGGTGAAGAAAGC+AGG + chr5_1:203058-203077 Msa0709110:CDS 50.0%
GAAGTGGTGAAGAAAGCAGG+TGG + chr5_1:203061-203080 Msa0709110:CDS 50.0%
GTGAAGAAAGCAGGTGGGAT+TGG + chr5_1:203067-203086 Msa0709110:CDS 50.0%
ATCAGGAGTTACATCGCCGA+TGG + chr5_1:203187-203206 Msa0709110:CDS 50.0%
TGACCGCGACTTAACTCCAT+CGG - chr5_1:203206-203225 None:intergenic 50.0%
AAGGAACTAGGCTTGGGGTT+AGG + chr5_1:203251-203270 Msa0709110:CDS 50.0%
TGGCATCATTCTCAGCGAGA+GGG + chr5_1:203287-203306 Msa0709110:CDS 50.0%
ATCTCTGGCGATTCAGGGTT+AGG - chr5_1:203313-203332 None:intergenic 50.0%
CCAGAAGGTCCAACTCTATC+CGG - chr5_1:203385-203404 None:intergenic 50.0%
!! TGATCAGAAGCACTGCCAGA+AGG - chr5_1:203400-203419 None:intergenic 50.0%
AGGACAAGCCATCGATGTAC+CGG - chr5_1:203449-203468 None:intergenic 50.0%
! GTGAGCCGCTTTCAACAAAG+CGG - chr5_1:203488-203507 None:intergenic 50.0%
TAGCAGCTGGACTCCAATCA+GGG - chr5_1:203510-203529 None:intergenic 50.0%
ATAGCAGCTGGACTCCAATC+AGG - chr5_1:203511-203530 None:intergenic 50.0%
CCAGGATCCAATGCTTTCTC+TGG - chr5_1:203649-203668 None:intergenic 50.0%
!! CCAGAGAAAGCATTGGATCC+TGG + chr5_1:203646-203665 Msa0709110:CDS 50.0%
GTTACCACCATTCCTTCAGG+TGG - chr5_1:203931-203950 None:intergenic 50.0%
!! GGAAAACGGTGTCGTATGTG+TGG - chr5_1:201992-202011 None:intergenic 50.0%
CACGTTCACCAGAGTTTCTC+GGG + chr5_1:202114-202133 Msa0709110:CDS 50.0%
!! ATGGAGCAACCCAGTTTTGG+CGG - chr5_1:202150-202169 None:intergenic 50.0%
! CTCATGGAGCAACCCAGTTT+TGG - chr5_1:202153-202172 None:intergenic 50.0%
! CCATGAGACTGATTTCGGGT+CGG + chr5_1:202166-202185 Msa0709110:CDS 50.0%
TATTGACACCGGAATCTGGC+CGG + chr5_1:202205-202224 Msa0709110:CDS 50.0%
TGGAAAGGAAGTTGCGTTGC+TGG + chr5_1:202275-202294 Msa0709110:CDS 50.0%
GGAAAGGAAGTTGCGTTGCT+GGG + chr5_1:202276-202295 Msa0709110:CDS 50.0%
! TGGGAAAGATTTTCCGGCGA+CGG + chr5_1:202295-202314 Msa0709110:CDS 50.0%
GCGTGTAACCGGAAGATCAT+CGG + chr5_1:202317-202336 Msa0709110:CDS 50.0%
GGAGCTAAGTATTTCTCCGG+CGG + chr5_1:202338-202357 Msa0709110:CDS 50.0%
GAGCTAAGTATTTCTCCGGC+GGG + chr5_1:202339-202358 Msa0709110:CDS 50.0%
CGTTTCATTCATCTTCCCGC+TGG - chr5_1:202375-202394 None:intergenic 50.0%
AGTGTGAGTTCCATGTCCGT+CGG - chr5_1:202423-202442 None:intergenic 50.0%
TGCCGGAGAAACATATCTCC+CGG - chr5_1:202459-202478 None:intergenic 50.0%
GACGTGGTTTCTCTCAGTGT+CGG + chr5_1:202620-202639 Msa0709110:CDS 50.0%
!!! GCTTTTGGAGCTTCTGATGC+CGG + chr5_1:202686-202705 Msa0709110:CDS 50.0%
GTTTCGGCATCAGCTGGTAA+CGG + chr5_1:202716-202735 Msa0709110:CDS 50.0%
CCACGGAGCTACATTGGTAA+CGG - chr5_1:202759-202778 None:intergenic 50.0%
CGTTACCAATGTAGCTCCGT+GGG + chr5_1:202757-202776 Msa0709110:CDS 50.0%
ATGTACCCGGTTGTGTATGC+CGG + chr5_1:202899-202918 Msa0709110:CDS 50.0%
GGTGAAGTGGTGAAGAAAGC+AGG + chr5_1:203058-203077 Msa0709110:CDS 50.0%
GAAGTGGTGAAGAAAGCAGG+TGG + chr5_1:203061-203080 Msa0709110:CDS 50.0%
GTGAAGAAAGCAGGTGGGAT+TGG + chr5_1:203067-203086 Msa0709110:CDS 50.0%
ATCAGGAGTTACATCGCCGA+TGG + chr5_1:203187-203206 Msa0709110:CDS 50.0%
TGACCGCGACTTAACTCCAT+CGG - chr5_1:203206-203225 None:intergenic 50.0%
AAGGAACTAGGCTTGGGGTT+AGG + chr5_1:203251-203270 Msa0709110:CDS 50.0%
TGGCATCATTCTCAGCGAGA+GGG + chr5_1:203287-203306 Msa0709110:CDS 50.0%
ATCTCTGGCGATTCAGGGTT+AGG - chr5_1:203313-203332 None:intergenic 50.0%
CCAGAAGGTCCAACTCTATC+CGG - chr5_1:203385-203404 None:intergenic 50.0%
!! TGATCAGAAGCACTGCCAGA+AGG - chr5_1:203400-203419 None:intergenic 50.0%
AGGACAAGCCATCGATGTAC+CGG - chr5_1:203449-203468 None:intergenic 50.0%
! GTGAGCCGCTTTCAACAAAG+CGG - chr5_1:203488-203507 None:intergenic 50.0%
TAGCAGCTGGACTCCAATCA+GGG - chr5_1:203510-203529 None:intergenic 50.0%
ATAGCAGCTGGACTCCAATC+AGG - chr5_1:203511-203530 None:intergenic 50.0%
CCAGGATCCAATGCTTTCTC+TGG - chr5_1:203649-203668 None:intergenic 50.0%
!! CCAGAGAAAGCATTGGATCC+TGG + chr5_1:203646-203665 Msa0709110:CDS 50.0%
GTTACCACCATTCCTTCAGG+TGG - chr5_1:203931-203950 None:intergenic 50.0%
CCGACCCGAAATCAGTCTCA+TGG - chr5_1:202169-202188 None:intergenic 55.0%
CTGTCTTTCCGGCCAGATTC+CGG - chr5_1:202216-202235 None:intergenic 55.0%
CCGGAACAGGACCAAGTTCA+CGG - chr5_1:202250-202269 None:intergenic 55.0%
CCGTGAACTTGGTCCTGTTC+CGG + chr5_1:202247-202266 Msa0709110:CDS 55.0%
TTGGTCCTGTTCCGGCGAAA+TGG + chr5_1:202255-202274 Msa0709110:CDS 55.0%
CCTTTCCATTTCGCCGGAAC+AGG - chr5_1:202263-202282 None:intergenic 55.0%
CCTGTTCCGGCGAAATGGAA+AGG + chr5_1:202260-202279 Msa0709110:CDS 55.0%
CGTTCTGCTAGAGACTCCGA+CGG + chr5_1:202404-202423 Msa0709110:CDS 55.0%
CGGAGAAACATATCTCCCGG+CGG - chr5_1:202456-202475 None:intergenic 55.0%
CGCCGGGAGATATGTTTCTC+CGG + chr5_1:202454-202473 Msa0709110:CDS 55.0%
!! TATGCTAAAGGTGTCGCCGC+CGG + chr5_1:202491-202510 Msa0709110:CDS 55.0%
TAAACGGCGAGACGAGCCTT+CGG - chr5_1:202524-202543 None:intergenic 55.0%
! GTGGTTTCTCTCAGTGTCGG+TGG + chr5_1:202623-202642 Msa0709110:CDS 55.0%
CCGTTACCAATGTAGCTCCG+TGG + chr5_1:202756-202775 Msa0709110:CDS 55.0%
TACCAATGTAGCTCCGTGGG+TGG + chr5_1:202760-202779 Msa0709110:CDS 55.0%
ATCCGACCCGGAGTTAAAGC+CGG - chr5_1:202881-202900 None:intergenic 55.0%
! TTGCCACGTTTTGCCTGCGA+CGG + chr5_1:203138-203157 Msa0709110:CDS 55.0%
TCGCCGATGGAGTTAAGTCG+CGG + chr5_1:203200-203219 Msa0709110:CDS 55.0%
AATGATGCCACCACAGGAGC+TGG - chr5_1:203277-203296 None:intergenic 55.0%
GCTGAGAATGATGCCACCAC+AGG - chr5_1:203283-203302 None:intergenic 55.0%
GTGGCATCATTCTCAGCGAG+AGG + chr5_1:203286-203305 Msa0709110:CDS 55.0%
CCGGATAGAGTTGGACCTTC+TGG + chr5_1:203382-203401 Msa0709110:CDS 55.0%
GCGGCCAAACCTGAAACATG+AGG - chr5_1:203469-203488 None:intergenic 55.0%
TGAAAGCGGCTCACCCTGAT+TGG + chr5_1:203494-203513 Msa0709110:CDS 55.0%
CCGACCCGAAATCAGTCTCA+TGG - chr5_1:202169-202188 None:intergenic 55.0%
CTGTCTTTCCGGCCAGATTC+CGG - chr5_1:202216-202235 None:intergenic 55.0%
CCGGAACAGGACCAAGTTCA+CGG - chr5_1:202250-202269 None:intergenic 55.0%
CCGTGAACTTGGTCCTGTTC+CGG + chr5_1:202247-202266 Msa0709110:CDS 55.0%
TTGGTCCTGTTCCGGCGAAA+TGG + chr5_1:202255-202274 Msa0709110:CDS 55.0%
CCTTTCCATTTCGCCGGAAC+AGG - chr5_1:202263-202282 None:intergenic 55.0%
CCTGTTCCGGCGAAATGGAA+AGG + chr5_1:202260-202279 Msa0709110:CDS 55.0%
CGTTCTGCTAGAGACTCCGA+CGG + chr5_1:202404-202423 Msa0709110:CDS 55.0%
CGGAGAAACATATCTCCCGG+CGG - chr5_1:202456-202475 None:intergenic 55.0%
CGCCGGGAGATATGTTTCTC+CGG + chr5_1:202454-202473 Msa0709110:CDS 55.0%
!! TATGCTAAAGGTGTCGCCGC+CGG + chr5_1:202491-202510 Msa0709110:CDS 55.0%
TAAACGGCGAGACGAGCCTT+CGG - chr5_1:202524-202543 None:intergenic 55.0%
! GTGGTTTCTCTCAGTGTCGG+TGG + chr5_1:202623-202642 Msa0709110:CDS 55.0%
CCGTTACCAATGTAGCTCCG+TGG + chr5_1:202756-202775 Msa0709110:CDS 55.0%
TACCAATGTAGCTCCGTGGG+TGG + chr5_1:202760-202779 Msa0709110:CDS 55.0%
ATCCGACCCGGAGTTAAAGC+CGG - chr5_1:202881-202900 None:intergenic 55.0%
! TTGCCACGTTTTGCCTGCGA+CGG + chr5_1:203138-203157 Msa0709110:CDS 55.0%
TCGCCGATGGAGTTAAGTCG+CGG + chr5_1:203200-203219 Msa0709110:CDS 55.0%
AATGATGCCACCACAGGAGC+TGG - chr5_1:203277-203296 None:intergenic 55.0%
GCTGAGAATGATGCCACCAC+AGG - chr5_1:203283-203302 None:intergenic 55.0%
GTGGCATCATTCTCAGCGAG+AGG + chr5_1:203286-203305 Msa0709110:CDS 55.0%
CCGGATAGAGTTGGACCTTC+TGG + chr5_1:203382-203401 Msa0709110:CDS 55.0%
GCGGCCAAACCTGAAACATG+AGG - chr5_1:203469-203488 None:intergenic 55.0%
TGAAAGCGGCTCACCCTGAT+TGG + chr5_1:203494-203513 Msa0709110:CDS 55.0%
!! GAGCAACCCAGTTTTGGCGG+CGG - chr5_1:202147-202166 None:intergenic 60.0%
GCTGGTAGCTTCATACCCGC+CGG - chr5_1:202357-202376 None:intergenic 60.0%
GGCGGGTATGAAGCTACCAG+CGG + chr5_1:202356-202375 Msa0709110:CDS 60.0%
GCGGGTATGAAGCTACCAGC+GGG + chr5_1:202357-202376 Msa0709110:CDS 60.0%
GCTAGAGACTCCGACGGACA+TGG + chr5_1:202410-202429 Msa0709110:CDS 60.0%
CACACTGCTTCAATCGCCGC+CGG + chr5_1:202437-202456 Msa0709110:CDS 60.0%
ACACTGCTTCAATCGCCGCC+GGG + chr5_1:202438-202457 Msa0709110:CDS 60.0%
!! TAAAGGTGTCGCCGCCGGTA+TGG + chr5_1:202496-202515 Msa0709110:CDS 60.0%
ACGAGCCTTCGGAGCCATAC+CGG - chr5_1:202513-202532 None:intergenic 60.0%
CACGTCAACACCGTCAGCCA+CGG - chr5_1:202606-202625 None:intergenic 60.0%
!! TCGGCATCAGCTGGTAACGG+TGG + chr5_1:202719-202738 Msa0709110:CDS 60.0%
!! TCAGCTGGTAACGGTGGACC+AGG + chr5_1:202725-202744 Msa0709110:CDS 60.0%
!! CTGGTAACGGTGGACCAGGT+GGG + chr5_1:202729-202748 Msa0709110:CDS 60.0%
!! TTGGTAACGGTGAGCCCACC+TGG - chr5_1:202746-202765 None:intergenic 60.0%
TGCCACCCACGGAGCTACAT+TGG - chr5_1:202765-202784 None:intergenic 60.0%
! TGGTGGGCCGGCTTTAACTC+CGG + chr5_1:202871-202890 Msa0709110:CDS 60.0%
AACTCCGGGTCGGATGTACC+CGG + chr5_1:202886-202905 Msa0709110:CDS 60.0%
ACAACCGGGTACATCCGACC+CGG - chr5_1:202893-202912 None:intergenic 60.0%
CACTGCCGGCATACACAACC+GGG - chr5_1:202907-202926 None:intergenic 60.0%
CCACTGCCGGCATACACAAC+CGG - chr5_1:202908-202927 None:intergenic 60.0%
TATGCCGGCAGTGGCGAACA+CGG + chr5_1:202914-202933 Msa0709110:CDS 60.0%
!! GAACACGGTGGTGGAGAAGG+TGG + chr5_1:202929-202948 Msa0709110:CDS 60.0%
!! GGTGGTGGAGAAGGTGGTGA+TGG + chr5_1:202935-202954 Msa0709110:CDS 60.0%
! TTTTGCCTGCGACGGCGGTT+GGG + chr5_1:203146-203165 Msa0709110:CDS 60.0%
GCTGCTTGGCCGGATAGAGT+TGG + chr5_1:203373-203392 Msa0709110:CDS 60.0%
!! GAGCAACCCAGTTTTGGCGG+CGG - chr5_1:202147-202166 None:intergenic 60.0%
GCTGGTAGCTTCATACCCGC+CGG - chr5_1:202357-202376 None:intergenic 60.0%
GGCGGGTATGAAGCTACCAG+CGG + chr5_1:202356-202375 Msa0709110:CDS 60.0%
GCGGGTATGAAGCTACCAGC+GGG + chr5_1:202357-202376 Msa0709110:CDS 60.0%
GCTAGAGACTCCGACGGACA+TGG + chr5_1:202410-202429 Msa0709110:CDS 60.0%
CACACTGCTTCAATCGCCGC+CGG + chr5_1:202437-202456 Msa0709110:CDS 60.0%
ACACTGCTTCAATCGCCGCC+GGG + chr5_1:202438-202457 Msa0709110:CDS 60.0%
!! TAAAGGTGTCGCCGCCGGTA+TGG + chr5_1:202496-202515 Msa0709110:CDS 60.0%
ACGAGCCTTCGGAGCCATAC+CGG - chr5_1:202513-202532 None:intergenic 60.0%
CACGTCAACACCGTCAGCCA+CGG - chr5_1:202606-202625 None:intergenic 60.0%
!! TCGGCATCAGCTGGTAACGG+TGG + chr5_1:202719-202738 Msa0709110:CDS 60.0%
!! TCAGCTGGTAACGGTGGACC+AGG + chr5_1:202725-202744 Msa0709110:CDS 60.0%
!! CTGGTAACGGTGGACCAGGT+GGG + chr5_1:202729-202748 Msa0709110:CDS 60.0%
!! TTGGTAACGGTGAGCCCACC+TGG - chr5_1:202746-202765 None:intergenic 60.0%
TGCCACCCACGGAGCTACAT+TGG - chr5_1:202765-202784 None:intergenic 60.0%
! TGGTGGGCCGGCTTTAACTC+CGG + chr5_1:202871-202890 Msa0709110:CDS 60.0%
AACTCCGGGTCGGATGTACC+CGG + chr5_1:202886-202905 Msa0709110:CDS 60.0%
ACAACCGGGTACATCCGACC+CGG - chr5_1:202893-202912 None:intergenic 60.0%
CACTGCCGGCATACACAACC+GGG - chr5_1:202907-202926 None:intergenic 60.0%
CCACTGCCGGCATACACAAC+CGG - chr5_1:202908-202927 None:intergenic 60.0%
TATGCCGGCAGTGGCGAACA+CGG + chr5_1:202914-202933 Msa0709110:CDS 60.0%
!! GAACACGGTGGTGGAGAAGG+TGG + chr5_1:202929-202948 Msa0709110:CDS 60.0%
!! GGTGGTGGAGAAGGTGGTGA+TGG + chr5_1:202935-202954 Msa0709110:CDS 60.0%
! TTTTGCCTGCGACGGCGGTT+GGG + chr5_1:203146-203165 Msa0709110:CDS 60.0%
GCTGCTTGGCCGGATAGAGT+TGG + chr5_1:203373-203392 Msa0709110:CDS 60.0%
TTCCGGCGACGGCGTGTAAC+CGG + chr5_1:202306-202325 Msa0709110:CDS 65.0%
TTCCGGTTACACGCCGTCGC+CGG - chr5_1:202311-202330 None:intergenic 65.0%
AGCCTTCGGAGCCATACCGG+CGG - chr5_1:202510-202529 None:intergenic 65.0%
TTTGACGCCGCCGTGGCTGA+CGG + chr5_1:202593-202612 Msa0709110:CDS 65.0%
GTCAACACCGTCAGCCACGG+CGG - chr5_1:202603-202622 None:intergenic 65.0%
!! CGTGGCTGACGGTGTTGACG+TGG + chr5_1:202604-202623 Msa0709110:CDS 65.0%
!! GCTGGTAACGGTGGACCAGG+TGG + chr5_1:202728-202747 Msa0709110:CDS 65.0%
GCTCCGTGGGTGGCAACTGT+CGG + chr5_1:202770-202789 Msa0709110:CDS 65.0%
! GCACCGACAGTTGCCACCCA+CGG - chr5_1:202776-202795 None:intergenic 65.0%
TGGGTGGCAACTGTCGGTGC+TGG + chr5_1:202776-202795 Msa0709110:CDS 65.0%
! GGGTGGCAACTGTCGGTGCT+GGG + chr5_1:202777-202796 Msa0709110:CDS 65.0%
! GGTGGGCCGGCTTTAACTCC+GGG + chr5_1:202872-202891 Msa0709110:CDS 65.0%
! GGCCGGCTTTAACTCCGGGT+CGG + chr5_1:202876-202895 Msa0709110:CDS 65.0%
CCGGTTGTGTATGCCGGCAG+TGG + chr5_1:202905-202924 Msa0709110:CDS 65.0%
ACCACCGTGTTCGCCACTGC+CGG - chr5_1:202921-202940 None:intergenic 65.0%
!! GGCGAACACGGTGGTGGAGA+AGG + chr5_1:202926-202945 Msa0709110:CDS 65.0%
! CCACGTTTTGCCTGCGACGG+CGG + chr5_1:203141-203160 Msa0709110:CDS 65.0%
! GTTTTGCCTGCGACGGCGGT+TGG + chr5_1:203145-203164 Msa0709110:CDS 65.0%
TTTGCCTGCGACGGCGGTTG+GGG + chr5_1:203147-203166 Msa0709110:CDS 65.0%
ACGGCGGTTGGGGCTATAGG+TGG + chr5_1:203157-203176 Msa0709110:CDS 65.0%
TGGGGTTAGGCCAGCTCCTG+TGG + chr5_1:203264-203283 Msa0709110:CDS 65.0%
GGTTAGGCCAGCTCCTGTGG+TGG + chr5_1:203267-203286 Msa0709110:CDS 65.0%
TTCCGGCGACGGCGTGTAAC+CGG + chr5_1:202306-202325 Msa0709110:CDS 65.0%
TTCCGGTTACACGCCGTCGC+CGG - chr5_1:202311-202330 None:intergenic 65.0%
AGCCTTCGGAGCCATACCGG+CGG - chr5_1:202510-202529 None:intergenic 65.0%
TTTGACGCCGCCGTGGCTGA+CGG + chr5_1:202593-202612 Msa0709110:CDS 65.0%
GTCAACACCGTCAGCCACGG+CGG - chr5_1:202603-202622 None:intergenic 65.0%
!! CGTGGCTGACGGTGTTGACG+TGG + chr5_1:202604-202623 Msa0709110:CDS 65.0%
!! GCTGGTAACGGTGGACCAGG+TGG + chr5_1:202728-202747 Msa0709110:CDS 65.0%
GCTCCGTGGGTGGCAACTGT+CGG + chr5_1:202770-202789 Msa0709110:CDS 65.0%
! GCACCGACAGTTGCCACCCA+CGG - chr5_1:202776-202795 None:intergenic 65.0%
TGGGTGGCAACTGTCGGTGC+TGG + chr5_1:202776-202795 Msa0709110:CDS 65.0%
! GGGTGGCAACTGTCGGTGCT+GGG + chr5_1:202777-202796 Msa0709110:CDS 65.0%
! GGTGGGCCGGCTTTAACTCC+GGG + chr5_1:202872-202891 Msa0709110:CDS 65.0%
! GGCCGGCTTTAACTCCGGGT+CGG + chr5_1:202876-202895 Msa0709110:CDS 65.0%
CCGGTTGTGTATGCCGGCAG+TGG + chr5_1:202905-202924 Msa0709110:CDS 65.0%
ACCACCGTGTTCGCCACTGC+CGG - chr5_1:202921-202940 None:intergenic 65.0%
!! GGCGAACACGGTGGTGGAGA+AGG + chr5_1:202926-202945 Msa0709110:CDS 65.0%
! CCACGTTTTGCCTGCGACGG+CGG + chr5_1:203141-203160 Msa0709110:CDS 65.0%
! GTTTTGCCTGCGACGGCGGT+TGG + chr5_1:203145-203164 Msa0709110:CDS 65.0%
TTTGCCTGCGACGGCGGTTG+GGG + chr5_1:203147-203166 Msa0709110:CDS 65.0%
ACGGCGGTTGGGGCTATAGG+TGG + chr5_1:203157-203176 Msa0709110:CDS 65.0%
TGGGGTTAGGCCAGCTCCTG+TGG + chr5_1:203264-203283 Msa0709110:CDS 65.0%
GGTTAGGCCAGCTCCTGTGG+TGG + chr5_1:203267-203286 Msa0709110:CDS 65.0%
GGCAGTGGCGAACACGGTGG+TGG + chr5_1:202920-202939 Msa0709110:CDS 70.0%
CCGCCGTCGCAGGCAAAACG+TGG - chr5_1:203144-203163 None:intergenic 70.0%
ATAGCCCCAACCGCCGTCGC+AGG - chr5_1:203154-203173 None:intergenic 70.0%
GCGACGGCGGTTGGGGCTAT+AGG + chr5_1:203154-203173 Msa0709110:CDS 70.0%
GGCAGTGGCGAACACGGTGG+TGG + chr5_1:202920-202939 Msa0709110:CDS 70.0%
CCGCCGTCGCAGGCAAAACG+TGG - chr5_1:203144-203163 None:intergenic 70.0%
ATAGCCCCAACCGCCGTCGC+AGG - chr5_1:203154-203173 None:intergenic 70.0%
GCGACGGCGGTTGGGGCTAT+AGG + chr5_1:203154-203173 Msa0709110:CDS 70.0%
CGCCGCCGGTATGGCTCCGA+AGG + chr5_1:202505-202524 Msa0709110:CDS 75.0%
TGCGGCGTTTGACGCCGCCG+TGG + chr5_1:202586-202605 Msa0709110:CDS 75.0%
GCCGGCAGTGGCGAACACGG+TGG + chr5_1:202917-202936 Msa0709110:CDS 75.0%
CGCCGCCGGTATGGCTCCGA+AGG + chr5_1:202505-202524 Msa0709110:CDS 75.0%
TGCGGCGTTTGACGCCGCCG+TGG + chr5_1:202586-202605 Msa0709110:CDS 75.0%
GCCGGCAGTGGCGAACACGG+TGG + chr5_1:202917-202936 Msa0709110:CDS 75.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 201792 204140 201792 ID=Msa0709110;Name=Msa0709110
chr5_1 mRNA 201792 204140 201792 ID=Msa0709110-mRNA-1;Parent=Msa0709110;Name=Msa0709110-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|-1|0|1|-1|1|1|0|782
chr5_1 exon 201792 204140 201792 ID=Msa0709110-mRNA-1:exon:33;Parent=Msa0709110-mRNA-1
chr5_1 CDS 201792 204140 201792 ID=Msa0709110-mRNA-1:cds;Parent=Msa0709110-mRNA-1
Gene Sequence

>Msa0709110

ATGGCACCATTTCCTTACCTCATTATTCTCTTATTCTTCTTCACTACCACACTCACACATTCTACTTCCACCCCACAAAAACAAACCTTCATAATCCAAGTCCAACACAATTCCAAACCATCCATTTTCCCAACACACAAAAATTGGTACGAATCCTCACTCTCATCAATCACAAAAATAACCTCAAACAACATTATCCACACATACGACACCGTTTTCCACGGTTTCTCAACAAAACTAACACAATTAGAAGCACAAAATCTTCAAAAACTAAGCCACGTTATCACTATAATACCCGAACAAATCCGAACACTTCACACAACACGTTCACCAGAGTTTCTCGGGTTAAAAACCGCCGCCAAAACTGGGTTGCTCCATGAGACTGATTTCGGGTCGGATCTTGTTATCGGAGTTATTGACACCGGAATCTGGCCGGAAAGACAGAGTTTCAACGACCGTGAACTTGGTCCTGTTCCGGCGAAATGGAAAGGAAGTTGCGTTGCTGGGAAAGATTTTCCGGCGACGGCGTGTAACCGGAAGATCATCGGAGCTAAGTATTTCTCCGGCGGGTATGAAGCTACCAGCGGGAAGATGAATGAAACGACTGAGTTTCGTTCTGCTAGAGACTCCGACGGACATGGAACTCACACTGCTTCAATCGCCGCCGGGAGATATGTTTCTCCGGCAAGTACTTTGGGTTATGCTAAAGGTGTCGCCGCCGGTATGGCTCCGAAGGCTCGTCTCGCCGTTTATAAAGTTTGCTGGACTGGTGGTTGTTTTGACTCCGATATACTTGCGGCGTTTGACGCCGCCGTGGCTGACGGTGTTGACGTGGTTTCTCTCAGTGTCGGTGGTGTTGTTGTGCCGTACCATCTTGACGTCATTGCTATCGGTGCTTTTGGAGCTTCTGATGCCGGAGTTTTTGTTTCGGCATCAGCTGGTAACGGTGGACCAGGTGGGCTCACCGTTACCAATGTAGCTCCGTGGGTGGCAACTGTCGGTGCTGGGACAATTGACAGAGATTTTCCTGCTGATGTGAAGCTTGGAAATGGTAAGATTATAGATGGAGTTAGTATTTATGGTGGGCCGGCTTTAACTCCGGGTCGGATGTACCCGGTTGTGTATGCCGGCAGTGGCGAACACGGTGGTGGAGAAGGTGGTGATGGTTATTCATCTTCACTTTGTTTAGCAGGTTCTTTAGATCCTAAGTTTGTAAAAGGAAAAATTGTTGTTTGTGATAGAGGGATTAATTCAAGAGGTGATAAAGGTGAAGTGGTGAAGAAAGCAGGTGGGATTGGTATGATTTTAGCTAATGGGGTGTTTGATGGTGAAGGGTTAGTAGCGGATTGCCACGTTTTGCCTGCGACGGCGGTTGGGGCTATAGGTGGCGATGTAATCAGGAGTTACATCGCCGATGGAGTTAAGTCGCGGTCATTGCCAACCGCGACTATTGTTTTTAAAGGAACTAGGCTTGGGGTTAGGCCAGCTCCTGTGGTGGCATCATTCTCAGCGAGAGGGCCTAACCCTGAATCGCCAGAGATTTTGAAACCAGATGTTATTGCACCTGGTTTGAATATTCTAGCTGCTTGGCCGGATAGAGTTGGACCTTCTGGCAGTGCTTCTGATCATAGAAGGACTGAATTCAACATATTATCCGGTACATCGATGGCTTGTCCTCATGTTTCAGGTTTGGCCGCTTTGTTGAAAGCGGCTCACCCTGATTGGAGTCCAGCTGCTATTAAATCAGCTCTTATGACTACTGCTTATACTGTCGATAACAAAGGCGATCCAATGTTGGATGAATCTAACGGGAATGTTTCGTCAGTGTTTGATTATGGAGCTGGTCATGTTCATCCAGAGAAAGCATTGGATCCTGGTTTGGTTTATGATATTTCAGTCTATGATTATGTTGATTTCTTGTGTAACTCAAATTACACCACAACGAATATTAAAGTGATCACAAGGAAAATTGCAGATTGTAGTAATGCTAAAAAAGCAGGACATTCTGGTAACTTGAATTATCCAACATTATCTGCAGTTTTTCAACAATATGGTAAACATAAAATGTCTACACATTTTATTAGGACTGTGACAAATGTTGGTGACCCAAAATCAGTTTACAAAGTAACAATTAATCCACCTGAAGGAATGGTGGTAACTGTGAAGCCAGATATGTTGCCTTTTAGAAGGGTTGGTCAGAAATTGAACTTTCTTGTTAGGGTACAAACTAGGGAAGTTAAGCTTTCACCTGGAAGTTCTTTAGTAAAGAGTGGTTCCATAGTTTGGTCTGATGGGGAACACATTGTCGCAAGTCCCTTAGTTGTGACAATGCAACAACCTCTTGATTAG
Protein sequence

>Msa0709110

MAPFPYLIILLFFFTTTLTHSTSTPQKQTFIIQVQHNSKPSIFPTHKNWYESSLSSITKITSNNIIHTYDTVFHGFSTKLTQLEAQNLQKLSHVITIIPEQIRTLHTTRSPEFLGLKTAAKTGLLHETDFGSDLVIGVIDTGIWPERQSFNDRELGPVPAKWKGSCVAGKDFPATACNRKIIGAKYFSGGYEATSGKMNETTEFRSARDSDGHGTHTASIAAGRYVSPASTLGYAKGVAAGMAPKARLAVYKVCWTGGCFDSDILAAFDAAVADGVDVVSLSVGGVVVPYHLDVIAIGAFGASDAGVFVSASAGNGGPGGLTVTNVAPWVATVGAGTIDRDFPADVKLGNGKIIDGVSIYGGPALTPGRMYPVVYAGSGEHGGGEGGDGYSSSLCLAGSLDPKFVKGKIVVCDRGINSRGDKGEVVKKAGGIGMILANGVFDGEGLVADCHVLPATAVGAIGGDVIRSYIADGVKSRSLPTATIVFKGTRLGVRPAPVVASFSARGPNPESPEILKPDVIAPGLNILAAWPDRVGPSGSASDHRRTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIKSALMTTAYTVDNKGDPMLDESNGNVSSVFDYGAGHVHPEKALDPGLVYDISVYDYVDFLCNSNYTTTNIKVITRKIADCSNAKKAGHSGNLNYPTLSAVFQQYGKHKMSTHFIRTVTNVGDPKSVYKVTINPPEGMVVTVKPDMLPFRRVGQKLNFLVRVQTREVKLSPGSSLVKSGSIVWSDGEHIVASPLVVTMQQPLD*