AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0418010

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0418010 MtrunA17_Chr3g0115601 96.525 777 26 1 1 777 1 776 0.0 1555
Msa0418010 MtrunA17_Chr5g0425471 70.897 780 221 3 3 777 4 782 0.0 1168
Msa0418010 MtrunA17_Chr5g0425451 70.128 780 227 3 3 777 4 782 0.0 1160
Msa0418010 MtrunA17_Chr5g0425431 69.897 774 226 3 10 777 8 780 0.0 1156
Msa0418010 MtrunA17_Chr5g0425531 69.565 782 231 3 3 777 4 785 0.0 1151
Msa0418010 MtrunA17_Chr5g0411571 51.596 783 347 13 12 775 11 780 0.0 776
Msa0418010 MtrunA17_Chr1g0194841 48.840 776 363 11 9 775 5 755 0.0 755
Msa0418010 MtrunA17_Chr2g0294751 49.611 772 357 15 7 773 8 752 0.0 753
Msa0418010 MtrunA17_Chr7g0269871 48.711 776 380 12 3 775 1 761 0.0 746
Msa0418010 MtrunA17_Chr1g0207281 48.316 772 367 11 9 767 23 775 0.0 721
Msa0418010 MtrunA17_Chr2g0278761 48.020 783 377 14 3 775 11 773 0.0 718
Msa0418010 MtrunA17_Chr4g0050591 46.701 788 380 15 5 777 12 774 0.0 710
Msa0418010 MtrunA17_Chr6g0461191 27.061 643 366 24 45 633 28 621 8.67e-43 165
Msa0418010 MtrunA17_Chr6g0461231 26.543 648 369 22 25 608 8 612 3.99e-42 163
Msa0418010 MtrunA17_Chr3g0104081 27.360 625 318 23 45 590 22 589 4.12e-42 162
Msa0418010 MtrunA17_Chr2g0292341 27.743 638 342 28 45 612 30 618 1.30e-41 162
Msa0418010 MtrunA17_Chr6g0461221 26.061 660 398 25 23 626 7 632 4.55e-40 157
Msa0418010 MtrunA17_Chr3g0118971 26.608 684 353 31 31 637 16 627 9.26e-40 155
Msa0418010 MtrunA17_Chr5g0429581 26.710 614 337 24 47 592 7 575 2.84e-39 154
Msa0418010 MtrunA17_Chr7g0253561 25.457 656 360 24 45 633 4 597 2.27e-38 151
Msa0418010 MtrunA17_Chr6g0461211 25.890 618 371 23 45 608 28 612 5.16e-38 150
Msa0418010 MtrunA17_Chr5g0429541 26.273 609 336 22 45 592 5 561 5.18e-35 141
Msa0418010 MtrunA17_Chr7g0253551 27.107 439 238 18 45 431 29 437 1.86e-28 119
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0418010 AT1G78060.1 65.287 749 243 8 29 770 22 760 0.0 1013
Msa0418010 AT5G10560.1 49.746 788 367 8 12 775 8 790 0.0 775
Msa0418010 AT3G19620.1 49.283 767 367 13 9 767 6 758 0.0 751
Msa0418010 AT1G02640.1 49.027 771 373 9 7 775 6 758 0.0 743
Msa0418010 AT5G64570.1 49.744 780 370 13 5 775 16 782 0.0 731
Msa0418010 AT5G09730.1 49.231 780 372 15 7 777 9 773 0.0 729
Msa0418010 AT5G49360.1 48.383 773 372 13 10 773 14 768 0.0 716
Msa0418010 AT5G64570.2 49.608 637 302 11 145 775 1 624 0.0 602
Msa0418010 AT5G64570.3 52.226 584 269 8 5 585 16 592 0.0 598
Msa0418010 AT5G09700.1 45.528 492 250 8 294 777 45 526 8.39e-136 412
Msa0418010 AT3G47000.1 26.461 616 336 25 45 590 10 578 1.23e-39 155
Msa0418010 AT5G04885.2 25.827 635 357 25 45 612 47 634 5.94e-39 154
Msa0418010 AT5G04885.3 25.762 656 371 26 24 612 11 617 6.11e-39 154
Msa0418010 AT5G04885.1 25.762 656 371 26 24 612 11 617 6.11e-39 154
Msa0418010 AT3G47040.4 26.560 625 371 26 39 608 4 595 7.65e-39 153
Msa0418010 AT3G47010.1 25.908 633 359 26 42 608 8 596 1.66e-38 152
Msa0418010 AT3G47050.1 26.898 606 356 25 41 592 6 578 2.22e-37 149
Msa0418010 AT3G47010.2 25.592 633 360 26 42 608 8 595 7.86e-37 147
Msa0418010 AT5G20950.2 27.039 662 349 24 45 637 26 622 4.76e-36 145
Msa0418010 AT5G20950.1 27.039 662 349 24 45 637 26 622 4.76e-36 145
Msa0418010 AT5G20950.3 27.039 662 349 24 45 637 104 700 8.92e-36 145
Msa0418010 AT5G20940.1 28.251 446 230 16 45 431 32 446 9.50e-35 141
Msa0418010 AT3G47040.1 25.653 651 369 26 39 608 4 620 1.42e-34 140
Msa0418010 AT3G62710.1 27.362 614 338 28 57 632 105 648 1.60e-33 137
Msa0418010 AT3G47000.3 28.825 451 222 19 45 431 10 425 3.91e-33 134
Msa0418010 AT3G47040.3 27.828 442 250 19 39 431 4 425 2.23e-32 131
Msa0418010 AT3G47010.4 27.115 461 242 19 42 443 8 433 5.49e-31 127
Msa0418010 AT3G47050.2 26.933 375 219 13 39 371 4 365 1.64e-26 113
Msa0418010 AT3G47010.3 25.416 421 272 17 204 608 23 417 1.89e-23 104
Msa0418010 AT3G47000.2 26.464 427 261 19 189 590 3 401 6.42e-23 102

Find 211 sgRNAs with CRISPR-Local

Find 402 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCCAAACATAAACATATTT+AGG 0.139750 3_2:-65546989 Msa0418010:CDS
AAGCAATGGGGATGACATTT+TGG 0.141480 3_2:-65547013 Msa0418010:CDS
GCTTCCCCTTTAACTCTTCT+AGG 0.180542 3_2:-65544883 Msa0418010:CDS
TTTATGAAACATGATTTATT+TGG 0.214097 3_2:-65543339 Msa0418010:three_prime_UTR
TTCTAAGCGACCAGTTATTT+TGG 0.214777 3_2:-65544593 Msa0418010:CDS
GTAATGTGATTCCAGTTTAA+TGG 0.220441 3_2:-65543291 Msa0418010:three_prime_UTR
GGAACTTTAATGTAATCTTT+TGG 0.232449 3_2:+65543951 None:intergenic
GTGAAGCAGTGTTCTTTAAA+AGG 0.237863 3_2:+65544962 None:intergenic
TTATTTATTTAGATGATCTA+TGG 0.249386 3_2:-65543252 Msa0418010:three_prime_UTR
TGAAACTAATTTGTACCTTA+TGG 0.259642 3_2:+65543728 None:intergenic
TAGTTTCCTAGAAGAGTTAA+AGG 0.263259 3_2:+65544877 None:intergenic
GGAAGCTTTGGGTTGCAAAA+TGG 0.269364 3_2:+65548651 None:intergenic
TGTGCTTATAACCGTGTAAA+TGG 0.271364 3_2:-65546484 Msa0418010:CDS
ATAAAATTGGAGGTATTATC+TGG 0.280329 3_2:-65544522 Msa0418010:CDS
ATGCCAAATGGAAGCTTTGC+TGG 0.286297 3_2:+65545057 None:intergenic
ACATTTCACTGCCTATGATT+TGG 0.297124 3_2:-65546817 Msa0418010:CDS
GGTCCTACGGTGTATGAATT+TGG 0.304426 3_2:-65543858 Msa0418010:CDS
CTTTGAGTGATCGGAAGCTT+TGG 0.307325 3_2:+65548639 None:intergenic
TCCCTAAATATGTTTATGTT+TGG 0.312006 3_2:+65546987 None:intergenic
CAATTGTTTCATAGGACTTC+CGG 0.316813 3_2:+65543584 None:intergenic
AAGCTTCCATTTGGCATGAT+TGG 0.317533 3_2:-65545051 Msa0418010:CDS
TATGCTGTTTCCTATGTTAG+AGG 0.328224 3_2:-65546906 Msa0418010:CDS
AACTGGTCGCTTAGAAGCTT+TGG 0.339984 3_2:+65544600 None:intergenic
TGGAAATGAAATAGGCAATT+GGG 0.344326 3_2:-65547067 Msa0418010:intron
GGATTATGTTGTTCTTGTTA+TGG 0.347221 3_2:-65544710 Msa0418010:CDS
AAACCTACCAATTGTTTCAT+AGG 0.347298 3_2:+65543576 None:intergenic
TCATTCGTCCACTCATTTGA+TGG 0.350391 3_2:-65543766 Msa0418010:CDS
TTAGCTGAACTAATATCTAT+AGG 0.354850 3_2:+65544553 None:intergenic
CTTCAAGGTGATTCCTTTCA+AGG 0.358682 3_2:-65546882 Msa0418010:CDS
GATTATGTTGTTCTTGTTAT+GGG 0.359567 3_2:-65544709 Msa0418010:CDS
GAGTCTTAAAACAAGGTCTT+TGG 0.360262 3_2:+65548614 None:intergenic
AAAGGGGAAGCATTGGCATT+AGG 0.364823 3_2:+65544895 None:intergenic
TTGCTGGATTTCCATCAAAT+AGG 0.367114 3_2:+65545073 None:intergenic
TACAAATTAGTTTCAGAGTT+AGG 0.368724 3_2:-65543720 Msa0418010:CDS
GAATCGAATAACAAGACTTA+AGG 0.371883 3_2:+65543197 None:intergenic
GTGTGAAGTGAGTGCATTAT+TGG 0.372583 3_2:+65548811 None:intergenic
TTTGAGTGATCGGAAGCTTT+GGG 0.373070 3_2:+65548640 None:intergenic
CTAGCTTTGATTCTCACCTT+TGG 0.378169 3_2:-65548410 Msa0418010:CDS
CATAGTTTGTTGTTAGATGC+AGG 0.385042 3_2:-65543552 Msa0418010:CDS
TCCAAACATAAACATATTTA+GGG 0.386351 3_2:-65546988 Msa0418010:CDS
ATCAAACAATGATATCTATC+AGG 0.387643 3_2:+65543409 None:intergenic
GTGGAAATGAAATAGGCAAT+TGG 0.388742 3_2:-65547068 Msa0418010:intron
CTGCCTATGATTTGGACAAT+TGG 0.391285 3_2:-65546809 Msa0418010:CDS
ATATACATATACCATTAAAC+TGG 0.393547 3_2:+65543280 None:intergenic
TCCTATGTTAGAGGACTTCA+AGG 0.398233 3_2:-65546897 Msa0418010:CDS
AAATCTATTTCTATACTTCA+AGG 0.399852 3_2:-65544838 Msa0418010:CDS
CTCATCCTCATGTCTGTCAT+TGG 0.406217 3_2:+65543930 None:intergenic
GATCCCGCAACCGGCTATCC+AGG 0.411353 3_2:-65543903 Msa0418010:CDS
TCACTTCACACTTCTCACTA+TGG 0.413169 3_2:-65548799 Msa0418010:exon
CTTCCAATTGTCCAAATCAT+AGG 0.416710 3_2:+65546806 None:intergenic
CAAAGGAGCACCAAAATAAC+TGG 0.417499 3_2:+65544583 None:intergenic
TGTTGTTCTTGTTATGGGAT+TGG 0.419650 3_2:-65544704 Msa0418010:CDS
TGGAAGCGAGAGTGAGGAAA+AGG 0.422389 3_2:+65548739 None:intergenic
ATTTGTTAAGAGATTGAAAT+CGG 0.423848 3_2:+65546447 None:intergenic
TACAATGGAGGACAAGCAAT+GGG 0.424197 3_2:-65547026 Msa0418010:CDS
CGTCCTGGATAGCCGGTTGC+GGG 0.426160 3_2:+65543900 None:intergenic
GAAGCTTTGGGTTGCAAAAT+GGG 0.427105 3_2:+65548652 None:intergenic
GGTCTCGTAAACAGCAATAT+AGG 0.429355 3_2:+65543621 None:intergenic
ATGAGCTCAAGTTGCTTGCC+TGG 0.436975 3_2:+65544634 None:intergenic
TGGTGGAGTGAAGCACTTCA+TGG 0.437164 3_2:-65548516 Msa0418010:CDS
AGTGAAGCACTTCATGGAAT+TGG 0.438899 3_2:-65548510 Msa0418010:CDS
AGTTTCCTAGAAGAGTTAAA+GGG 0.439616 3_2:+65544878 None:intergenic
GCACGGTCTATTCGAACTAT+AGG 0.440133 3_2:+65545132 None:intergenic
CTTAGTCGAGCGAACGAGGC+TGG 0.444276 3_2:-65543486 Msa0418010:CDS
GCGCTTGCACAGATTATCTT+CGG 0.444836 3_2:-65544469 Msa0418010:CDS
CCTTTCAAGGTGGTAAATTG+AGG 0.447530 3_2:-65546869 Msa0418010:CDS
TGCAACAAGCAGAAGCTTGA+AGG 0.451720 3_2:+65546841 None:intergenic
CGGAAGTCCTATGAAACAAT+TGG 0.454607 3_2:-65543583 Msa0418010:CDS
AATGGGTAGGATCTGGTTGA+TGG 0.455801 3_2:+65548669 None:intergenic
GTTGCTGATGTTCTTCATGC+TGG 0.461257 3_2:-65546205 Msa0418010:intron
CGTGTTCATCTTGACTTGCC+AGG 0.468378 3_2:-65544652 Msa0418010:CDS
CTGAAAATTCAGAAACCATA+AGG 0.470959 3_2:-65543743 Msa0418010:CDS
ATCTTCGGTGACCACAATCC+AGG 0.473820 3_2:-65544454 Msa0418010:intron
AGTATTTCCTTAGCAGTCAT+AGG 0.475975 3_2:-65544919 Msa0418010:CDS
ATTCCTAGACTTGGTATCCC+TGG 0.476443 3_2:-65548546 Msa0418010:CDS
TGTTGTTAGATGCAGGGGAA+AGG 0.476995 3_2:-65543545 Msa0418010:CDS
GAGGAAGACTGCCAATTACT+TGG 0.477124 3_2:-65543977 Msa0418010:CDS
TCGTCCTGGATAGCCGGTTG+CGG 0.478908 3_2:+65543899 None:intergenic
AATCCAGCAAAGCTTCCATT+TGG 0.479595 3_2:-65545060 Msa0418010:CDS
TGCTCAATGCAACTACGAAA+TGG 0.482034 3_2:+65546529 None:intergenic
GCCTCCCTACAATGTTTCCA+TGG 0.482349 3_2:+65543646 None:intergenic
ATAAGGCTAGGCCTATTTGA+TGG 0.482689 3_2:-65545084 Msa0418010:CDS
CTTTCAAGGTGGTAAATTGA+GGG 0.483323 3_2:-65546868 Msa0418010:CDS
AAATACTGTTAGAAAACAAT+GGG 0.484703 3_2:-65546428 Msa0418010:CDS
GCATAGTTAGAAGTCATCAT+AGG 0.485327 3_2:+65546924 None:intergenic
CGCAATGCCTCCGAGTTCAC+CGG 0.485334 3_2:+65544489 None:intergenic
GTGCTTATAACCGTGTAAAT+GGG 0.486214 3_2:-65546483 Msa0418010:CDS
CAAGACTTAAGGTGAAAGTA+AGG 0.486886 3_2:+65543208 None:intergenic
ACATATTTAGGGATCCAAGA+TGG 0.488212 3_2:-65546977 Msa0418010:CDS
AGGGTTTCACCACTATGTTA+AGG 0.490232 3_2:-65544818 Msa0418010:CDS
GCTCTTGAAGCTGCAAGAAA+CGG 0.490942 3_2:-65544991 Msa0418010:CDS
CTGCTGTAGTAATAACTTGA+GGG 0.493520 3_2:+65548433 None:intergenic
CATATTTAGGGATCCAAGAT+GGG 0.494587 3_2:-65546976 Msa0418010:CDS
ATTGGAGGTATTATCTGGGC+TGG 0.495300 3_2:-65544517 Msa0418010:CDS
AATCTATTTCTATACTTCAA+GGG 0.497613 3_2:-65544837 Msa0418010:CDS
ATGAGAGCTGATCCCGCAAC+CGG 0.499710 3_2:-65543912 Msa0418010:CDS
CCTCAATTTACCACCTTGAA+AGG 0.503529 3_2:+65546869 None:intergenic
TCACTCCACCACTGATAACC+AGG 0.504074 3_2:+65548528 None:intergenic
CTTCATGGAATTGGTAATGT+TGG 0.506207 3_2:-65548501 Msa0418010:CDS
GGTCGTGGGATCTTCTTCAA+TGG 0.507866 3_2:-65548480 Msa0418010:CDS
TGTCAGATTGTGGAGCTGTT+GGG 0.508258 3_2:-65546273 Msa0418010:CDS
TGTGAAGTGAGTGCATTATT+GGG 0.508279 3_2:+65548812 None:intergenic
TTTCATCCTGGTTGTGATGG+TGG 0.509672 3_2:-65544787 Msa0418010:CDS
ATTATCTGGGCTGGTTATCC+CGG 0.511568 3_2:-65544508 Msa0418010:CDS
GCTGGTTATCCCGGTGAACT+CGG 0.513527 3_2:-65544499 Msa0418010:CDS
GTGTCAGATTGTGGAGCTGT+TGG 0.514165 3_2:-65546274 Msa0418010:CDS
GTTGCAAAATGGGTAGGATC+TGG 0.514278 3_2:+65548662 None:intergenic
TTGGAACCAATCATGCCAAA+TGG 0.515211 3_2:+65545045 None:intergenic
TTTGAATAATCACAAGCAAA+TGG 0.515855 3_2:+65548693 None:intergenic
GCTCCTCCCATTCCTAGACT+TGG 0.519108 3_2:-65548555 Msa0418010:CDS
CCTTTGGTACCGAATCGGTC+AGG 0.519532 3_2:-65548394 Msa0418010:intron
TCTCACCTTTGGTACCGAAT+CGG 0.521384 3_2:-65548399 Msa0418010:CDS
AGGTATATTGTGTCAGATTG+TGG 0.526072 3_2:-65546283 Msa0418010:CDS
ATTTGAGCCGAAGCACACTT+TGG 0.527987 3_2:+65544763 None:intergenic
TAAAATCTGTAAGTTCGTCC+TGG 0.528263 3_2:+65543885 None:intergenic
GTATCCCTGGTTATCAGTGG+TGG 0.534454 3_2:-65548533 Msa0418010:CDS
GTAAGTTCGTCCTGGATAGC+CGG 0.534593 3_2:+65543893 None:intergenic
AACAATATACCTGACCGATT+CGG 0.535347 3_2:+65548385 None:intergenic
AAGAGTTAAAGGGGAAGCAT+TGG 0.535694 3_2:+65544888 None:intergenic
AGGGATACCAAGTCTAGGAA+TGG 0.537426 3_2:+65548548 None:intergenic
TCTTTGGTTCTTTGAGTGAT+CGG 0.539157 3_2:+65548630 None:intergenic
AGTGAGGAAAAGGAAGATGA+TGG 0.540782 3_2:+65548749 None:intergenic
AGATTGAAATCGGCACAACT+TGG 0.540868 3_2:+65546457 None:intergenic
AACTTGGAACCCCATTTACA+CGG 0.544433 3_2:+65546473 None:intergenic
CGCGAGCATCGAAGTGAAAG+CGG 0.546150 3_2:+65546775 None:intergenic
AGTATAGAAATAGATTTACA+AGG 0.547314 3_2:+65544844 None:intergenic
AAGTGAGTGCATTATTGGGC+TGG 0.548449 3_2:+65548816 None:intergenic
GGGATACCAAGTCTAGGAAT+GGG 0.549981 3_2:+65548549 None:intergenic
ATAGTTTGTTGTTAGATGCA+GGG 0.550004 3_2:-65543551 Msa0418010:CDS
TGGTGGACCAAAGTGTGCTT+CGG 0.550209 3_2:-65544770 Msa0418010:CDS
CAAATACTGTTAGAAAACAA+TGG 0.551853 3_2:-65546429 Msa0418010:CDS
GGAATTGGTAATGTTGGTCG+TGG 0.557908 3_2:-65548495 Msa0418010:CDS
GATGATGGTGACAAAGGTAA+AGG 0.558419 3_2:+65548764 None:intergenic
AGGGTCTCATTTGTTGCATG+TGG 0.558547 3_2:-65543445 Msa0418010:CDS
ACTCTTCTAGGAAACTATGC+TGG 0.560876 3_2:-65544871 Msa0418010:CDS
AGACCACTAAAACATCGAAC+CGG 0.563354 3_2:-65543603 Msa0418010:CDS
ATTGGATCAAAGTGTAGAGA+GGG 0.564885 3_2:-65544686 Msa0418010:CDS
TAGTTTGTTGTTAGATGCAG+GGG 0.565163 3_2:-65543550 Msa0418010:CDS
AAGGAAGATGATGGTGACAA+AGG 0.565981 3_2:+65548758 None:intergenic
TAAAATTGGAGGTATTATCT+GGG 0.566330 3_2:-65544521 Msa0418010:CDS
CTTTGGGTTGCAAAATGGGT+AGG 0.566909 3_2:+65548656 None:intergenic
GGTTTGAAGATCATAGAAGA+AGG 0.567462 3_2:-65543465 Msa0418010:CDS
ATGGGTAGGATCTGGTTGAT+GGG 0.568615 3_2:+65548670 None:intergenic
GCAGGGGAAAGGAGACATGT+TGG 0.569438 3_2:-65543534 Msa0418010:CDS
ACCTTGAAGTCCTCTAACAT+AGG 0.569504 3_2:+65546896 None:intergenic
AATTGAAAATAGATTGTGAA+GGG 0.571295 3_2:+65545110 None:intergenic
CTATGATTTGGACAATTGGA+AGG 0.571540 3_2:-65546805 Msa0418010:CDS
GCTGCTGTAGTAATAACTTG+AGG 0.574575 3_2:+65548432 None:intergenic
CTGAGTTGGAAGCGAGAGTG+AGG 0.574607 3_2:+65548733 None:intergenic
TTTCGTAGTTGCATTGAGCA+AGG 0.577135 3_2:-65546526 Msa0418010:CDS
ATACAATGGAGGACAAGCAA+TGG 0.578829 3_2:-65547027 Msa0418010:CDS
AAAGGTAAAGGTTGATGAGA+GGG 0.579378 3_2:+65548776 None:intergenic
GAAAACAATGGGAATTCCAC+GGG 0.579779 3_2:-65546417 Msa0418010:intron
ACATCTTAGTCGAGCGAACG+AGG 0.581381 3_2:-65543490 Msa0418010:CDS
TAGAAATAGATTTACAAGGA+GGG 0.590318 3_2:+65544848 None:intergenic
GCAATGCCTCCGAGTTCACC+GGG 0.590372 3_2:+65544490 None:intergenic
ATTAGGACCTATGACTGCTA+AGG 0.590903 3_2:+65544912 None:intergenic
GTTTCCTAGAAGAGTTAAAG+GGG 0.591308 3_2:+65544879 None:intergenic
AAACAGCGTCCTTAACATAG+TGG 0.592457 3_2:+65544809 None:intergenic
TAGTTGAGCAAGCACTGAGT+TGG 0.593560 3_2:+65548719 None:intergenic
AAGAAACTTCACCTGGATTG+TGG 0.594801 3_2:+65544443 None:intergenic
AGAAAACAATGGGAATTCCA+CGG 0.595910 3_2:-65546418 Msa0418010:CDS
ACGGTGTATGAATTTGGCCA+TGG 0.600902 3_2:-65543852 Msa0418010:CDS
AAAACCATGGAAACATTGTA+GGG 0.601928 3_2:-65543650 Msa0418010:CDS
GGGAGAGGACAAGAAACAGC+TGG 0.605215 3_2:-65546954 Msa0418010:CDS
CCAATGTGAGTCTTAAAACA+AGG 0.609441 3_2:+65548607 None:intergenic
ATGAAGTTTGTCGTGTGTAA+CGG 0.610203 3_2:+65543794 None:intergenic
TTGGTATCCCTGGTTATCAG+TGG 0.611691 3_2:-65548536 Msa0418010:CDS
TAACCAGGGATACCAAGTCT+AGG 0.616722 3_2:+65548543 None:intergenic
TTTCAAGGTGGTAAATTGAG+GGG 0.618147 3_2:-65546867 Msa0418010:CDS
AGTCCTATGAAACAATTGGT+AGG 0.618848 3_2:-65543579 Msa0418010:CDS
GATTGGATCAAAGTGTAGAG+AGG 0.621514 3_2:-65544687 Msa0418010:CDS
ATATTTAGGGATCCAAGATG+GGG 0.624537 3_2:-65546975 Msa0418010:CDS
AAAATAGATTGTGAAGGGCA+CGG 0.626411 3_2:+65545115 None:intergenic
TTGAGGGAAGCTAGTTGCAG+AGG 0.628505 3_2:+65548449 None:intergenic
ATGTCGGTCTCAGTCACAGT+TGG 0.630385 3_2:-65543678 Msa0418010:CDS
TTTGGTCCACCATCACAACC+AGG 0.632794 3_2:+65544781 None:intergenic
CCTGACCGATTCGGTACCAA+AGG 0.633028 3_2:+65548394 None:intergenic
GGATCATACATGATGAGCAA+GGG 0.637641 3_2:-65546252 Msa0418010:CDS
GTTTGAAGATCATAGAAGAA+GGG 0.639357 3_2:-65543464 Msa0418010:CDS
ATTGAGCAAGGACGAGCTAG+TGG 0.641480 3_2:-65546514 Msa0418010:CDS
GGGATCATACATGATGAGCA+AGG 0.642469 3_2:-65546253 Msa0418010:CDS
GGAAATGAAATAGGCAATTG+GGG 0.645119 3_2:-65547066 Msa0418010:intron
TGCTTATAACCGTGTAAATG+GGG 0.648687 3_2:-65546482 Msa0418010:CDS
GGGTCTCATTTGTTGCATGT+GGG 0.649952 3_2:-65543444 Msa0418010:CDS
CAAGGTGATTCCTTTCAAGG+TGG 0.650018 3_2:-65546879 Msa0418010:CDS
GCAGGGATGGATCTAGAATG+TGG 0.651822 3_2:-65545204 Msa0418010:intron
GAATAATCACAAGCAAATGG+TGG 0.652398 3_2:+65548696 None:intergenic
ATAGAAATAGATTTACAAGG+AGG 0.657022 3_2:+65544847 None:intergenic
TAATTGAAAATAGATTGTGA+AGG 0.658304 3_2:+65545109 None:intergenic
CAAAGGTAAAGGTTGATGAG+AGG 0.662391 3_2:+65548775 None:intergenic
ATACCAAGTCTAGGAATGGG+AGG 0.662802 3_2:+65548552 None:intergenic
TATCTATAGGACCTCCACAA+AGG 0.668985 3_2:+65544566 None:intergenic
TGGCCAAATTCATACACCGT+AGG 0.671014 3_2:+65543855 None:intergenic
GCGAGAGCAATATACAATGG+AGG 0.674380 3_2:-65547038 Msa0418010:CDS
AGGGTATGCAAAATCAGCAG+AGG 0.675215 3_2:-65546233 Msa0418010:CDS
GAAGCGAGAGCAATATACAA+TGG 0.675980 3_2:-65547041 Msa0418010:CDS
AAGTTCCAATGACAGACATG+AGG 0.676512 3_2:-65543935 Msa0418010:CDS
CACTCCACCACTGATAACCA+GGG 0.677155 3_2:+65548529 None:intergenic
GCTCGACTAAGATGTTCACA+AGG 0.677345 3_2:+65543498 None:intergenic
AGTGAAAGTTGCTAAGAATG+CGG 0.682763 3_2:-65544731 Msa0418010:CDS
ACCATGGAAACATTGTAGGG+AGG 0.683771 3_2:-65543647 Msa0418010:CDS
TGTAACGGAAACAAACTCGT+AGG 0.683975 3_2:+65543809 None:intergenic
AGAAACCTGCAAAAGCATGT+CGG 0.689737 3_2:-65543694 Msa0418010:CDS
TATGATTTGGACAATTGGAA+GGG 0.691461 3_2:-65546804 Msa0418010:CDS
GAATTGGTAATGTTGGTCGT+GGG 0.693912 3_2:-65548494 Msa0418010:CDS
GGTTATCCCGGTGAACTCGG+AGG 0.700448 3_2:-65544496 Msa0418010:CDS
TATTTAGGGATCCAAGATGG+GGG 0.707233 3_2:-65546974 Msa0418010:CDS
TGCTTCGGCTCAAATAGACG+AGG 0.719505 3_2:-65544755 Msa0418010:CDS
ACAATGGAGGACAAGCAATG+GGG 0.736483 3_2:-65547025 Msa0418010:CDS
TCAATGCAACTACGAAATGG+TGG 0.737851 3_2:+65546532 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATAATAATGTAAAAAGA+GGG + chr3_2:65545838-65545857 None:intergenic 10.0%
!!! TACCTTTTAACTTATTTTTA+CGG - chr3_2:65543777-65543796 Msa0418010:CDS 15.0%
!! AAAAAGTAAAACTAACTAAT+CGG + chr3_2:65545615-65545634 None:intergenic 15.0%
!! GATAATAATAATGTAAAAAG+AGG + chr3_2:65545839-65545858 None:intergenic 15.0%
!! ATAACTATACAATTAAATCT+TGG - chr3_2:65545894-65545913 Msa0418010:intron 15.0%
!!! TGATATAGTATAATTCTTTT+TGG - chr3_2:65546140-65546159 Msa0418010:intron 15.0%
!!! ATAATTTTCCTTTACTTTAA+TGG - chr3_2:65546214-65546233 Msa0418010:CDS 15.0%
!!! ACTATTTTAATAACTTAACA+TGG + chr3_2:65546498-65546517 None:intergenic 15.0%
!!! ATCTATTTTCAATTAGAATA+AGG - chr3_2:65546895-65546914 Msa0418010:CDS 15.0%
!! CTTAAGATATAATGAATTTA+CGG + chr3_2:65547926-65547945 None:intergenic 15.0%
!! TTTATGAAACATGATTTATT+TGG - chr3_2:65548657-65548676 Msa0418010:CDS 15.0%
!! TTATTTATTTAGATGATCTA+TGG - chr3_2:65548744-65548763 Msa0418010:CDS 15.0%
!!! TATAAGAATGACCAATTTTA+TGG + chr3_2:65543941-65543960 None:intergenic 20.0%
!! ACTGGTATATGAAAAAAATT+TGG - chr3_2:65543979-65543998 Msa0418010:CDS 20.0%
!! ATCATAGAGGAAAAAATATA+GGG + chr3_2:65544109-65544128 None:intergenic 20.0%
!! AATCATAGAGGAAAAAATAT+AGG + chr3_2:65544110-65544129 None:intergenic 20.0%
!!! ATATTTTTTCCTCTATGATT+TGG - chr3_2:65544110-65544129 Msa0418010:intron 20.0%
!!! ATATAGCTTAACTATGTTTT+TGG + chr3_2:65544461-65544480 None:intergenic 20.0%
!! ATTTAGCTGTTTATCTAAAT+AGG - chr3_2:65544510-65544529 Msa0418010:CDS 20.0%
!! TTTAGCTGTTTATCTAAATA+GGG - chr3_2:65544511-65544530 Msa0418010:CDS 20.0%
!!! ATAAAAATTTTGCAATGCAA+AGG + chr3_2:65544688-65544707 None:intergenic 20.0%
!!! GAAGTTACTTTTCATTTTTT+TGG - chr3_2:65544879-65544898 Msa0418010:CDS 20.0%
!!! TAATTGTTTTTGAATGAATG+TGG - chr3_2:65544909-65544928 Msa0418010:CDS 20.0%
!! TCCAAACATAAACATATTTA+GGG - chr3_2:65545008-65545027 Msa0418010:CDS 20.0%
!!! ATTTGTTAAGAGATTGAAAT+CGG + chr3_2:65545552-65545571 None:intergenic 20.0%
!! AAATACTGTTAGAAAACAAT+GGG - chr3_2:65545568-65545587 Msa0418010:intron 20.0%
!!! TAATTAAGTGTAACATTTTG+TGG - chr3_2:65545679-65545698 Msa0418010:intron 20.0%
!! AAAAACAGAATTGAATGAAA+TGG + chr3_2:65546115-65546134 None:intergenic 20.0%
!! ATAGAAAACCATTAAAGTAA+AGG + chr3_2:65546225-65546244 None:intergenic 20.0%
!! TCATCAAAATATAAACTCTT+TGG - chr3_2:65546282-65546301 Msa0418010:CDS 20.0%
!! AGAATAATAAATACAGTTGA+GGG + chr3_2:65546396-65546415 None:intergenic 20.0%
!! AAGAATAATAAATACAGTTG+AGG + chr3_2:65546397-65546416 None:intergenic 20.0%
!!! TCTATCTAGCTATAATATTT+TGG - chr3_2:65546535-65546554 Msa0418010:CDS 20.0%
!! AATTGAAAATAGATTGTGAA+GGG + chr3_2:65546889-65546908 None:intergenic 20.0%
!! TAATTGAAAATAGATTGTGA+AGG + chr3_2:65546890-65546909 None:intergenic 20.0%
!!! AGCTAGATATAAATGATTTT+CGG + chr3_2:65546988-65547007 None:intergenic 20.0%
!! AGTATAGAAATAGATTTACA+AGG + chr3_2:65547155-65547174 None:intergenic 20.0%
!!! AAATCTATTTCTATACTTCA+AGG - chr3_2:65547158-65547177 Msa0418010:intron 20.0%
!!! AATCTATTTCTATACTTCAA+GGG - chr3_2:65547159-65547178 Msa0418010:intron 20.0%
!! TGAACTATTAAACAAACAAA+AGG - chr3_2:65547592-65547611 Msa0418010:intron 20.0%
!! AGATTAGATAACATTCAATT+TGG - chr3_2:65547615-65547634 Msa0418010:intron 20.0%
!!! GAACTTTAATGTAATCTTTT+GGG + chr3_2:65548047-65548066 None:intergenic 20.0%
!! ATATACATATACCATTAAAC+TGG + chr3_2:65548719-65548738 None:intergenic 20.0%
! TTTGAATAATCACAAGCAAA+TGG + chr3_2:65543306-65543325 None:intergenic 25.0%
!!! GGTTATGAATTTTTTTAAGG+CGG + chr3_2:65543682-65543701 None:intergenic 25.0%
!!! AGCGGTTATGAATTTTTTTA+AGG + chr3_2:65543685-65543704 None:intergenic 25.0%
! GACCGTAAAAATAAGTTAAA+AGG + chr3_2:65543782-65543801 None:intergenic 25.0%
! TGTAAGACTTATTGATACAA+TGG - chr3_2:65543849-65543868 Msa0418010:CDS 25.0%
!! CACAAATTTGTTCTCATTAT+TGG + chr3_2:65543889-65543908 None:intergenic 25.0%
!! CATATACCAGTAAACTATTT+TGG + chr3_2:65543970-65543989 None:intergenic 25.0%
! TCATAGAGGAAAAAATATAG+GGG + chr3_2:65544108-65544127 None:intergenic 25.0%
! CATAAAATTTGTGCCAAATT+GGG + chr3_2:65544147-65544166 None:intergenic 25.0%
! ATGCTCAATATAAAGATGAA+TGG + chr3_2:65544177-65544196 None:intergenic 25.0%
! ATTCATCTTTATATTGAGCA+TGG - chr3_2:65544176-65544195 Msa0418010:intron 25.0%
!! TAATCAGGGTTTCAAATTTT+TGG + chr3_2:65544237-65544256 None:intergenic 25.0%
!! AAAAATTTGAAACCCTGATT+AGG - chr3_2:65544236-65544255 Msa0418010:intron 25.0%
!! AAAATTTGAAACCCTGATTA+GGG - chr3_2:65544237-65544256 Msa0418010:intron 25.0%
! ATTTGGAAAAAATTGAGAGA+AGG - chr3_2:65544383-65544402 Msa0418010:intron 25.0%
!! ACCATTTTGCAGAAAATATA+AGG - chr3_2:65544844-65544863 Msa0418010:CDS 25.0%
! GAAAAGTAACTTCACTATTT+AGG + chr3_2:65544872-65544891 None:intergenic 25.0%
!!! TTACTTTTCATTTTTTTGGC+TGG - chr3_2:65544883-65544902 Msa0418010:CDS 25.0%
! AATGAATGTGGAAATGAAAT+AGG - chr3_2:65544921-65544940 Msa0418010:CDS 25.0%
! CTCCAAACATAAACATATTT+AGG - chr3_2:65545007-65545026 Msa0418010:CDS 25.0%
! TCCCTAAATATGTTTATGTT+TGG + chr3_2:65545012-65545031 None:intergenic 25.0%
!!! AACAAAAAAGCATTGTAACT+AGG + chr3_2:65545263-65545282 None:intergenic 25.0%
! CAAATACTGTTAGAAAACAA+TGG - chr3_2:65545567-65545586 Msa0418010:intron 25.0%
!! ATTTTGTGGTGAATAAAATC+AGG - chr3_2:65545693-65545712 Msa0418010:intron 25.0%
! TTCATGCTGGTATATATTTA+GGG - chr3_2:65545804-65545823 Msa0418010:intron 25.0%
! TAATAATGTAAAAAGAGGGT+TGG + chr3_2:65545834-65545853 None:intergenic 25.0%
!!! TAGATATATGGCTTTGAATA+AGG - chr3_2:65546039-65546058 Msa0418010:intron 25.0%
! GTGAAATGCAAATTTGAAAA+AGG + chr3_2:65546171-65546190 None:intergenic 25.0%
!! ATTATGGTTTTCTTGACTAT+AGG - chr3_2:65546708-65546727 Msa0418010:intron 25.0%
!! TTTTCAATTAGAATAAGGCT+AGG - chr3_2:65546900-65546919 Msa0418010:CDS 25.0%
! TAGAAATAGATTTACAAGGA+GGG + chr3_2:65547151-65547170 None:intergenic 25.0%
! ATAGAAATAGATTTACAAGG+AGG + chr3_2:65547152-65547171 None:intergenic 25.0%
!! GATTATGTTGTTCTTGTTAT+GGG - chr3_2:65547287-65547306 Msa0418010:intron 25.0%
! TTAGCTGAACTAATATCTAT+AGG + chr3_2:65547446-65547465 None:intergenic 25.0%
! GCTAAAAATGACGATAAAAT+TGG - chr3_2:65547461-65547480 Msa0418010:intron 25.0%
! AAAAATGACGATAAAATTGG+AGG - chr3_2:65547464-65547483 Msa0418010:intron 25.0%
!!! ATAAAATTGGAGGTATTATC+TGG - chr3_2:65547474-65547493 Msa0418010:intron 25.0%
!!! TAAAATTGGAGGTATTATCT+GGG - chr3_2:65547475-65547494 Msa0418010:intron 25.0%
! TTATTAAAGTTGTCTACAGA+AGG - chr3_2:65547667-65547686 Msa0418010:intron 25.0%
! CTTTAAACTCGCATATAATT+TGG + chr3_2:65547757-65547776 None:intergenic 25.0%
!! ACATGTTGTAGAGATATTTT+AGG - chr3_2:65547835-65547854 Msa0418010:intron 25.0%
!!! TTTTAGGAGTAATATAACAG+TGG - chr3_2:65547851-65547870 Msa0418010:intron 25.0%
!! GGAACTTTAATGTAATCTTT+TGG + chr3_2:65548048-65548067 None:intergenic 25.0%
!! TGAAACTAATTTGTACCTTA+TGG + chr3_2:65548271-65548290 None:intergenic 25.0%
!! TACAAATTAGTTTCAGAGTT+AGG - chr3_2:65548276-65548295 Msa0418010:intron 25.0%
! ATCAAACAATGATATCTATC+AGG + chr3_2:65548590-65548609 None:intergenic 25.0%
!! ATCACATTACAGTACATTTT+TGG + chr3_2:65548695-65548714 None:intergenic 25.0%
TTGTTCACTCGTAGAATTTA+AGG - chr3_2:65543629-65543648 Msa0418010:CDS 30.0%
! GCATGTCAAAAATTCTAAAG+CGG + chr3_2:65543703-65543722 None:intergenic 30.0%
GTATCAATAAGTCTTACAGT+TGG + chr3_2:65543847-65543866 None:intergenic 30.0%
AAGACTTATTGATACAATGG+TGG - chr3_2:65543852-65543871 Msa0418010:CDS 30.0%
AGACTTATTGATACAATGGT+GGG - chr3_2:65543853-65543872 Msa0418010:CDS 30.0%
AATGAGAACAAATTTGTGCA+TGG - chr3_2:65543891-65543910 Msa0418010:CDS 30.0%
! AAGAATGACCAATTTTATGG+TGG + chr3_2:65543938-65543957 None:intergenic 30.0%
AGCTATCCAAAATAGTTTAC+TGG - chr3_2:65543961-65543980 Msa0418010:CDS 30.0%
! ACAATAGCAAAATGCGTTTT+AGG + chr3_2:65544061-65544080 None:intergenic 30.0%
CATAGAGGAAAAAATATAGG+GGG + chr3_2:65544107-65544126 None:intergenic 30.0%
GCATAAAATTTGTGCCAAAT+TGG + chr3_2:65544148-65544167 None:intergenic 30.0%
TGTCATCTCAACGTAAAATT+TGG - chr3_2:65544366-65544385 Msa0418010:intron 30.0%
! CATTTTCTCTCTCAATCTAA+TGG + chr3_2:65544730-65544749 None:intergenic 30.0%
! GCCTTATATTTTCTGCAAAA+TGG + chr3_2:65544848-65544867 None:intergenic 30.0%
TGGAAATGAAATAGGCAATT+GGG - chr3_2:65544929-65544948 Msa0418010:CDS 30.0%
! TATGATTTGGACAATTGGAA+GGG - chr3_2:65545192-65545211 Msa0418010:CDS 30.0%
! CTGCAAAAAGTACATATGTT+TGG + chr3_2:65545340-65545359 None:intergenic 30.0%
TTCAGTAAAAGTTTCTCACT+CGG + chr3_2:65545387-65545406 None:intergenic 30.0%
TATCTTGTTGAAGCAATGAA+TGG - chr3_2:65545646-65545665 Msa0418010:intron 30.0%
CTTCATGCTGGTATATATTT+AGG - chr3_2:65545803-65545822 Msa0418010:intron 30.0%
AATGAACTCACAAAGTGTAA+AGG - chr3_2:65545927-65545946 Msa0418010:intron 30.0%
!!! CTTTTGTCGGTTTAGATATA+TGG - chr3_2:65546027-65546046 Msa0418010:intron 30.0%
!!! TATGGCTTTGAATAAGGTTT+TGG - chr3_2:65546045-65546064 Msa0418010:intron 30.0%
ACTAGAAAGTAACAGACAAA+TGG + chr3_2:65546327-65546346 None:intergenic 30.0%
GTAAATAGCTTTCTATACGA+GGG + chr3_2:65546440-65546459 None:intergenic 30.0%
TGTAAATAGCTTTCTATACG+AGG + chr3_2:65546441-65546460 None:intergenic 30.0%
ATTTATGTAGACAAGTCCAA+AGG - chr3_2:65546460-65546479 Msa0418010:CDS 30.0%
TTTATGTAGACAAGTCCAAA+GGG - chr3_2:65546461-65546480 Msa0418010:CDS 30.0%
ATGGTGTAATTATTTCCCTT+TGG + chr3_2:65546479-65546498 None:intergenic 30.0%
ACACTATCATTGTGTGATTA+TGG - chr3_2:65546692-65546711 Msa0418010:intron 30.0%
!! AATGTGCTTTGAAAATTTGC+AGG - chr3_2:65546774-65546793 Msa0418010:intron 30.0%
!! ATGTGCTTTGAAAATTTGCA+GGG - chr3_2:65546775-65546794 Msa0418010:intron 30.0%
!!! GAAATACTAGTTTTTGGAAG+TGG + chr3_2:65547065-65547084 None:intergenic 30.0%
!!! GCTAAGGAAATACTAGTTTT+TGG + chr3_2:65547071-65547090 None:intergenic 30.0%
AGTTTCCTAGAAGAGTTAAA+GGG + chr3_2:65547121-65547140 None:intergenic 30.0%
TAGTTTCCTAGAAGAGTTAA+AGG + chr3_2:65547122-65547141 None:intergenic 30.0%
GGATTATGTTGTTCTTGTTA+TGG - chr3_2:65547286-65547305 Msa0418010:intron 30.0%
ATTATACAAGAAACTTCACC+TGG + chr3_2:65547563-65547582 None:intergenic 30.0%
TGTATGTTGCAGGAAAAAAT+TGG + chr3_2:65547818-65547837 None:intergenic 30.0%
! AGTTTTCTACCGTTAATACA+TGG - chr3_2:65547899-65547918 Msa0418010:intron 30.0%
ATTTACGGACCATGTATTAA+CGG + chr3_2:65547911-65547930 None:intergenic 30.0%
CATTCATGACTAAAATTGAG+TGG + chr3_2:65547991-65548010 None:intergenic 30.0%
! ACGAACTTACAGATTTTACA+AGG - chr3_2:65548116-65548135 Msa0418010:intron 30.0%
! CGAACTTACAGATTTTACAA+GGG - chr3_2:65548117-65548136 Msa0418010:intron 30.0%
CTGAAAATTCAGAAACCATA+AGG - chr3_2:65548253-65548272 Msa0418010:intron 30.0%
AAAAACCATGGAAACATTGT+AGG - chr3_2:65548345-65548364 Msa0418010:intron 30.0%
AAAACCATGGAAACATTGTA+GGG - chr3_2:65548346-65548365 Msa0418010:intron 30.0%
AAACCTACCAATTGTTTCAT+AGG + chr3_2:65548423-65548442 None:intergenic 30.0%
!! ATAGTTTGTTGTTAGATGCA+GGG - chr3_2:65548445-65548464 Msa0418010:CDS 30.0%
GTTTGAAGATCATAGAAGAA+GGG - chr3_2:65548532-65548551 Msa0418010:CDS 30.0%
GTAATGTGATTCCAGTTTAA+TGG - chr3_2:65548705-65548724 Msa0418010:CDS 30.0%
GAATCGAATAACAAGACTTA+AGG + chr3_2:65548802-65548821 None:intergenic 30.0%
TGTGAAGTGAGTGCATTATT+GGG + chr3_2:65543187-65543206 None:intergenic 35.0%
!! AAAGGTAAAGGTTGATGAGA+GGG + chr3_2:65543223-65543242 None:intergenic 35.0%
GAATAATCACAAGCAAATGG+TGG + chr3_2:65543303-65543322 None:intergenic 35.0%
!! TCTTTGGTTCTTTGAGTGAT+CGG + chr3_2:65543369-65543388 None:intergenic 35.0%
GAGTCTTAAAACAAGGTCTT+TGG + chr3_2:65543385-65543404 None:intergenic 35.0%
CCAATGTGAGTCTTAAAACA+AGG + chr3_2:65543392-65543411 None:intergenic 35.0%
!!! CCTTGTTTTAAGACTCACAT+TGG - chr3_2:65543389-65543408 Msa0418010:three_prime_UTR 35.0%
!! CTTCATGGAATTGGTAATGT+TGG - chr3_2:65543495-65543514 Msa0418010:CDS 35.0%
CTGCTGTAGTAATAACTTGA+GGG + chr3_2:65543566-65543585 None:intergenic 35.0%
AACAATATACCTGACCGATT+CGG + chr3_2:65543614-65543633 None:intergenic 35.0%
TTTGTGAGAGAGAGTGAAAA+CGG - chr3_2:65543742-65543761 Msa0418010:CDS 35.0%
TCACATGTCCACCATAAAAT+TGG - chr3_2:65543927-65543946 Msa0418010:CDS 35.0%
AAATTTGTGCCAAATTGGGA+GGG + chr3_2:65544143-65544162 None:intergenic 35.0%
AAAATTTGTGCCAAATTGGG+AGG + chr3_2:65544144-65544163 None:intergenic 35.0%
GTGAATGAAATCCCTAATCA+GGG + chr3_2:65544251-65544270 None:intergenic 35.0%
AGTGAATGAAATCCCTAATC+AGG + chr3_2:65544252-65544271 None:intergenic 35.0%
TTGTAGAGAATCGAAGTTCA+GGG - chr3_2:65544576-65544595 Msa0418010:CDS 35.0%
! ATCCAAATCCTATTTTCCGA+TGG + chr3_2:65544665-65544684 None:intergenic 35.0%
CAGAGTCGTTAATCTACTAA+CGG + chr3_2:65544758-65544777 None:intergenic 35.0%
! AATCTAACAGTTTTGCAGCA+TGG - chr3_2:65544797-65544816 Msa0418010:CDS 35.0%
GTGGAAATGAAATAGGCAAT+TGG - chr3_2:65544928-65544947 Msa0418010:CDS 35.0%
GGAAATGAAATAGGCAATTG+GGG - chr3_2:65544930-65544949 Msa0418010:CDS 35.0%
ACATATTTAGGGATCCAAGA+TGG - chr3_2:65545019-65545038 Msa0418010:CDS 35.0%
CATATTTAGGGATCCAAGAT+GGG - chr3_2:65545020-65545039 Msa0418010:CDS 35.0%
ATATTTAGGGATCCAAGATG+GGG - chr3_2:65545021-65545040 Msa0418010:CDS 35.0%
GCATAGTTAGAAGTCATCAT+AGG + chr3_2:65545075-65545094 None:intergenic 35.0%
!! TATGCTGTTTCCTATGTTAG+AGG - chr3_2:65545090-65545109 Msa0418010:CDS 35.0%
CTTTCAAGGTGGTAAATTGA+GGG - chr3_2:65545128-65545147 Msa0418010:CDS 35.0%
TTTCAAGGTGGTAAATTGAG+GGG - chr3_2:65545129-65545148 Msa0418010:CDS 35.0%
ACATTTCACTGCCTATGATT+TGG - chr3_2:65545179-65545198 Msa0418010:CDS 35.0%
CTTCCAATTGTCCAAATCAT+AGG + chr3_2:65545193-65545212 None:intergenic 35.0%
! CTATGATTTGGACAATTGGA+AGG - chr3_2:65545191-65545210 Msa0418010:CDS 35.0%
! CTTATATTTAAGACCGAACG+TGG + chr3_2:65545296-65545315 None:intergenic 35.0%
ACCTGAAGAATCATATGTCA+CGG + chr3_2:65545413-65545432 None:intergenic 35.0%
TGTGCTTATAACCGTGTAAA+TGG - chr3_2:65545512-65545531 Msa0418010:intron 35.0%
GTGCTTATAACCGTGTAAAT+GGG - chr3_2:65545513-65545532 Msa0418010:intron 35.0%
TGCTTATAACCGTGTAAATG+GGG - chr3_2:65545514-65545533 Msa0418010:intron 35.0%
AGAAAACAATGGGAATTCCA+CGG - chr3_2:65545578-65545597 Msa0418010:intron 35.0%
TTGTTGAAGCAATGAATGGT+TGG - chr3_2:65545650-65545669 Msa0418010:intron 35.0%
AGGTATATTGTGTCAGATTG+TGG - chr3_2:65545713-65545732 Msa0418010:intron 35.0%
!! CATTGTCACTTGTCTTTTGT+CGG - chr3_2:65546014-65546033 Msa0418010:intron 35.0%
CAGTCATAGATGAATATGTC+AGG + chr3_2:65546352-65546371 None:intergenic 35.0%
!! TTGAGGGAAAGTCTTTTTCA+AGG + chr3_2:65546380-65546399 None:intergenic 35.0%
! GGTGTTATGACATAATACCA+TGG - chr3_2:65546639-65546658 Msa0418010:intron 35.0%
ATACCATGGTGAAATCTAAC+TGG - chr3_2:65546653-65546672 Msa0418010:intron 35.0%
AAAATAGATTGTGAAGGGCA+CGG + chr3_2:65546884-65546903 None:intergenic 35.0%
TTGCTGGATTTCCATCAAAT+AGG + chr3_2:65546926-65546945 None:intergenic 35.0%
! AATGATTTTCGGAACAGACA+TGG + chr3_2:65546977-65546996 None:intergenic 35.0%
GTGAAGCAGTGTTCTTTAAA+AGG + chr3_2:65547037-65547056 None:intergenic 35.0%
AGTATTTCCTTAGCAGTCAT+AGG - chr3_2:65547077-65547096 Msa0418010:intron 35.0%
GTTTCCTAGAAGAGTTAAAG+GGG + chr3_2:65547120-65547139 None:intergenic 35.0%
AGTGAAAGTTGCTAAGAATG+CGG - chr3_2:65547265-65547284 Msa0418010:intron 35.0%
! TGTTGTTCTTGTTATGGGAT+TGG - chr3_2:65547292-65547311 Msa0418010:intron 35.0%
ATTGGATCAAAGTGTAGAGA+GGG - chr3_2:65547310-65547329 Msa0418010:intron 35.0%
! TTCTAAGCGACCAGTTATTT+TGG - chr3_2:65547403-65547422 Msa0418010:intron 35.0%
TGTTGCAGGAAAAAATTGGA+TGG + chr3_2:65547814-65547833 None:intergenic 35.0%
TTTAGTCATGAATGCAATGC+AGG - chr3_2:65547997-65548016 Msa0418010:intron 35.0%
!! TCTTTTGGGTACCAAGTAAT+TGG + chr3_2:65548033-65548052 None:intergenic 35.0%
TAAAATCTGTAAGTTCGTCC+TGG + chr3_2:65548114-65548133 None:intergenic 35.0%
ATGAAGTTTGTCGTGTGTAA+CGG + chr3_2:65548205-65548224 None:intergenic 35.0%
! ATTTTCAGCCATCAAATGAG+TGG + chr3_2:65548241-65548260 None:intergenic 35.0%
ACAGTTGGAGTAAAAAACCA+TGG - chr3_2:65548333-65548352 Msa0418010:intron 35.0%
CAATTGTTTCATAGGACTTC+CGG + chr3_2:65548415-65548434 None:intergenic 35.0%
AGTCCTATGAAACAATTGGT+AGG - chr3_2:65548417-65548436 Msa0418010:CDS 35.0%
!! CATAGTTTGTTGTTAGATGC+AGG - chr3_2:65548444-65548463 Msa0418010:CDS 35.0%
!! TAGTTTGTTGTTAGATGCAG+GGG - chr3_2:65548446-65548465 Msa0418010:CDS 35.0%
GGTTTGAAGATCATAGAAGA+AGG - chr3_2:65548531-65548550 Msa0418010:CDS 35.0%
CAAGACTTAAGGTGAAAGTA+AGG + chr3_2:65548791-65548810 None:intergenic 35.0%
GTGTGAAGTGAGTGCATTAT+TGG + chr3_2:65543188-65543207 None:intergenic 40.0%
TCACTTCACACTTCTCACTA+TGG - chr3_2:65543197-65543216 Msa0418010:three_prime_UTR 40.0%
!! CAAAGGTAAAGGTTGATGAG+AGG + chr3_2:65543224-65543243 None:intergenic 40.0%
! GATGATGGTGACAAAGGTAA+AGG + chr3_2:65543235-65543254 None:intergenic 40.0%
! AAGGAAGATGATGGTGACAA+AGG + chr3_2:65543241-65543260 None:intergenic 40.0%
AGTGAGGAAAAGGAAGATGA+TGG + chr3_2:65543250-65543269 None:intergenic 40.0%
!! GAAGCTTTGGGTTGCAAAAT+GGG + chr3_2:65543347-65543366 None:intergenic 40.0%
TTTGAGTGATCGGAAGCTTT+GGG + chr3_2:65543359-65543378 None:intergenic 40.0%
! AGTGAAGCACTTCATGGAAT+TGG - chr3_2:65543486-65543505 Msa0418010:CDS 40.0%
!! GAATTGGTAATGTTGGTCGT+GGG - chr3_2:65543502-65543521 Msa0418010:CDS 40.0%
GCTGCTGTAGTAATAACTTG+AGG + chr3_2:65543567-65543586 None:intergenic 40.0%
!! CTAGCTTTGATTCTCACCTT+TGG - chr3_2:65543586-65543605 Msa0418010:CDS 40.0%
! CTAACACGCACAAGTTTGTT+TGG - chr3_2:65543801-65543820 Msa0418010:CDS 40.0%
!! TTATGGTGGACATGTGAGAT+AGG + chr3_2:65543924-65543943 None:intergenic 40.0%
AATATAGGGGGTCAAATCGT+GGG + chr3_2:65544095-65544114 None:intergenic 40.0%
AAATATAGGGGGTCAAATCG+TGG + chr3_2:65544096-65544115 None:intergenic 40.0%
AATTTGTGCCAAATTGGGAG+GGG + chr3_2:65544142-65544161 None:intergenic 40.0%
AAGGACTACCGAATAGCAAA+TGG - chr3_2:65544402-65544421 Msa0418010:intron 40.0%
AGGACTACCGAATAGCAAAT+GGG - chr3_2:65544403-65544422 Msa0418010:intron 40.0%
!! TTTGGCTCCCATTTGCTATT+CGG + chr3_2:65544413-65544432 None:intergenic 40.0%
! GTATTGCGGTTGTACGATTT+TGG + chr3_2:65544431-65544450 None:intergenic 40.0%
AATCGTACAACCGCAATACT+TGG - chr3_2:65544432-65544451 Msa0418010:intron 40.0%
ATCGTACAACCGCAATACTT+GGG - chr3_2:65544433-65544452 Msa0418010:intron 40.0%
!! GAGTGTTGCTTCATCCATAT+CGG - chr3_2:65544542-65544561 Msa0418010:CDS 40.0%
CTTCATCCATATCGGTATCA+GGG - chr3_2:65544550-65544569 Msa0418010:CDS 40.0%
TTCATCCATATCGGTATCAG+GGG - chr3_2:65544551-65544570 Msa0418010:CDS 40.0%
GTTGTAGAGAATCGAAGTTC+AGG - chr3_2:65544575-65544594 Msa0418010:CDS 40.0%
TGTAGAGAATCGAAGTTCAG+GGG - chr3_2:65544577-65544596 Msa0418010:CDS 40.0%
CACCATCGGAAAATAGGATT+TGG - chr3_2:65544660-65544679 Msa0418010:CDS 40.0%
! GTTCTTCAGTAGCTGCTTTA+TGG + chr3_2:65544826-65544845 None:intergenic 40.0%
GAAGCGAGAGCAATATACAA+TGG - chr3_2:65544955-65544974 Msa0418010:CDS 40.0%
ATACAATGGAGGACAAGCAA+TGG - chr3_2:65544969-65544988 Msa0418010:CDS 40.0%
TACAATGGAGGACAAGCAAT+GGG - chr3_2:65544970-65544989 Msa0418010:CDS 40.0%
! AAGCAATGGGGATGACATTT+TGG - chr3_2:65544983-65545002 Msa0418010:CDS 40.0%
! AGCAATGGGGATGACATTTT+GGG - chr3_2:65544984-65545003 Msa0418010:CDS 40.0%
TATTTAGGGATCCAAGATGG+GGG - chr3_2:65545022-65545041 Msa0418010:CDS 40.0%
TCCTATGTTAGAGGACTTCA+AGG - chr3_2:65545099-65545118 Msa0418010:CDS 40.0%
ACCTTGAAGTCCTCTAACAT+AGG + chr3_2:65545103-65545122 None:intergenic 40.0%
CTTCAAGGTGATTCCTTTCA+AGG - chr3_2:65545114-65545133 Msa0418010:CDS 40.0%
CCTCAATTTACCACCTTGAA+AGG + chr3_2:65545130-65545149 None:intergenic 40.0%
CCTTTCAAGGTGGTAAATTG+AGG - chr3_2:65545127-65545146 Msa0418010:CDS 40.0%
! CTGCCTATGATTTGGACAAT+TGG - chr3_2:65545187-65545206 Msa0418010:CDS 40.0%
! GTTCCTCTTTTTACCACGTT+CGG - chr3_2:65545280-65545299 Msa0418010:intron 40.0%
TCAATGCAACTACGAAATGG+TGG + chr3_2:65545467-65545486 None:intergenic 40.0%
TGCTCAATGCAACTACGAAA+TGG + chr3_2:65545470-65545489 None:intergenic 40.0%
TTTCGTAGTTGCATTGAGCA+AGG - chr3_2:65545470-65545489 Msa0418010:intron 40.0%
AACTTGGAACCCCATTTACA+CGG + chr3_2:65545526-65545545 None:intergenic 40.0%
AGATTGAAATCGGCACAACT+TGG + chr3_2:65545542-65545561 None:intergenic 40.0%
GAAAACAATGGGAATTCCAC+GGG - chr3_2:65545579-65545598 Msa0418010:intron 40.0%
AATCGGTAATTATTCACCCG+TGG + chr3_2:65545598-65545617 None:intergenic 40.0%
GGATCATACATGATGAGCAA+GGG - chr3_2:65545744-65545763 Msa0418010:intron 40.0%
! TGACAAGTGACTTGCAGATT+AGG + chr3_2:65545960-65545979 None:intergenic 40.0%
CATCCAGTTAGATTTCACCA+TGG + chr3_2:65546659-65546678 None:intergenic 40.0%
GTGAAATCTAACTGGATGTC+AGG - chr3_2:65546661-65546680 Msa0418010:intron 40.0%
!! GCTTTGAAAATTTGCAGGGA+TGG - chr3_2:65546779-65546798 Msa0418010:CDS 40.0%
ATAAGGCTAGGCCTATTTGA+TGG - chr3_2:65546912-65546931 Msa0418010:CDS 40.0%
AATCCAGCAAAGCTTCCATT+TGG - chr3_2:65546936-65546955 Msa0418010:CDS 40.0%
AAGCTTCCATTTGGCATGAT+TGG - chr3_2:65546945-65546964 Msa0418010:CDS 40.0%
TTGGAACCAATCATGCCAAA+TGG + chr3_2:65546954-65546973 None:intergenic 40.0%
! ATTTTCGGAACAGACATGGT+TGG + chr3_2:65546973-65546992 None:intergenic 40.0%
ATTAGGACCTATGACTGCTA+AGG + chr3_2:65547087-65547106 None:intergenic 40.0%
! AAGAGTTAAAGGGGAAGCAT+TGG + chr3_2:65547111-65547130 None:intergenic 40.0%
! ACTCTTCTAGGAAACTATGC+TGG - chr3_2:65547125-65547144 Msa0418010:intron 40.0%
AGGGTTTCACCACTATGTTA+AGG - chr3_2:65547178-65547197 Msa0418010:intron 40.0%
AAACAGCGTCCTTAACATAG+TGG + chr3_2:65547190-65547209 None:intergenic 40.0%
! GTTTTTCATCCTGGTTGTGA+TGG - chr3_2:65547206-65547225 Msa0418010:intron 40.0%
GATTGGATCAAAGTGTAGAG+AGG - chr3_2:65547309-65547328 Msa0418010:intron 40.0%
!! CAAAGGAGCACCAAAATAAC+TGG + chr3_2:65547416-65547435 None:intergenic 40.0%
!!! GTTATTTTGGTGCTCCTTTG+TGG - chr3_2:65547416-65547435 Msa0418010:intron 40.0%
TATCTATAGGACCTCCACAA+AGG + chr3_2:65547433-65547452 None:intergenic 40.0%
AAGAAACTTCACCTGGATTG+TGG + chr3_2:65547556-65547575 None:intergenic 40.0%
CTCTACAACATGTATGTTGC+AGG + chr3_2:65547828-65547847 None:intergenic 40.0%
AAGTTCCAATGACAGACATG+AGG - chr3_2:65548061-65548080 Msa0418010:intron 40.0%
! CAGATTTTACAAGGGTCCTA+CGG - chr3_2:65548125-65548144 Msa0418010:intron 40.0%
! TGTAACGGAAACAAACTCGT+AGG + chr3_2:65548190-65548209 None:intergenic 40.0%
TCATTCGTCCACTCATTTGA+TGG - chr3_2:65548230-65548249 Msa0418010:intron 40.0%
! AGAAACCTGCAAAAGCATGT+CGG - chr3_2:65548302-65548321 Msa0418010:intron 40.0%
GGTCTCGTAAACAGCAATAT+AGG + chr3_2:65548378-65548397 None:intergenic 40.0%
AGACCACTAAAACATCGAAC+CGG - chr3_2:65548393-65548412 Msa0418010:intron 40.0%
CGGAAGTCCTATGAAACAAT+TGG - chr3_2:65548413-65548432 Msa0418010:CDS 40.0%
AAGTGAGTGCATTATTGGGC+TGG + chr3_2:65543183-65543202 None:intergenic 45.0%
!! TAGTTGAGCAAGCACTGAGT+TGG + chr3_2:65543280-65543299 None:intergenic 45.0%
ATGGGTAGGATCTGGTTGAT+GGG + chr3_2:65543329-65543348 None:intergenic 45.0%
AATGGGTAGGATCTGGTTGA+TGG + chr3_2:65543330-65543349 None:intergenic 45.0%
GTTGCAAAATGGGTAGGATC+TGG + chr3_2:65543337-65543356 None:intergenic 45.0%
!! CTTTGGGTTGCAAAATGGGT+AGG + chr3_2:65543343-65543362 None:intergenic 45.0%
!! GGAAGCTTTGGGTTGCAAAA+TGG + chr3_2:65543348-65543367 None:intergenic 45.0%
CTTTGAGTGATCGGAAGCTT+TGG + chr3_2:65543360-65543379 None:intergenic 45.0%
ATACCAAGTCTAGGAATGGG+AGG + chr3_2:65543447-65543466 None:intergenic 45.0%
GGGATACCAAGTCTAGGAAT+GGG + chr3_2:65543450-65543469 None:intergenic 45.0%
AGGGATACCAAGTCTAGGAA+TGG + chr3_2:65543451-65543470 None:intergenic 45.0%
! ATTCCTAGACTTGGTATCCC+TGG - chr3_2:65543450-65543469 Msa0418010:CDS 45.0%
TAACCAGGGATACCAAGTCT+AGG + chr3_2:65543456-65543475 None:intergenic 45.0%
TTGGTATCCCTGGTTATCAG+TGG - chr3_2:65543460-65543479 Msa0418010:CDS 45.0%
!! GGAATTGGTAATGTTGGTCG+TGG - chr3_2:65543501-65543520 Msa0418010:CDS 45.0%
! TCTCACCTTTGGTACCGAAT+CGG - chr3_2:65543597-65543616 Msa0418010:CDS 45.0%
AGAGAGAGTGAAAACGGCTT+AGG - chr3_2:65543748-65543767 Msa0418010:CDS 45.0%
ATATAGGGGGTCAAATCGTG+GGG + chr3_2:65544094-65544113 None:intergenic 45.0%
! GGGGTACTACCAAATCATAG+AGG + chr3_2:65544122-65544141 None:intergenic 45.0%
ATTTGTGCCAAATTGGGAGG+GGG + chr3_2:65544141-65544160 None:intergenic 45.0%
!! GACTATGAGTGTTGAGTGTC+AGG - chr3_2:65544332-65544351 Msa0418010:intron 45.0%
TCGTACAACCGCAATACTTG+GGG - chr3_2:65544434-65544453 Msa0418010:intron 45.0%
!! TTTTTGGCCCCCAAGTATTG+CGG + chr3_2:65544445-65544464 None:intergenic 45.0%
GCTTCATCCATATCGGTATC+AGG - chr3_2:65544549-65544568 Msa0418010:CDS 45.0%
CGAAGTTCAGGGGAGTTATT+AGG - chr3_2:65544587-65544606 Msa0418010:CDS 45.0%
CACTGTCACCATCGGAAAAT+AGG - chr3_2:65544654-65544673 Msa0418010:CDS 45.0%
GCGAGAGCAATATACAATGG+AGG - chr3_2:65544958-65544977 Msa0418010:CDS 45.0%
ACAATGGAGGACAAGCAATG+GGG - chr3_2:65544971-65544990 Msa0418010:CDS 45.0%
CAAGGTGATTCCTTTCAAGG+TGG - chr3_2:65545117-65545136 Msa0418010:CDS 45.0%
TGCAACAAGCAGAAGCTTGA+AGG + chr3_2:65545158-65545177 None:intergenic 45.0%
AGACCGAACGTGGTAAAAAG+AGG + chr3_2:65545286-65545305 None:intergenic 45.0%
GCCGTGACATATGATTCTTC+AGG - chr3_2:65545409-65545428 Msa0418010:intron 45.0%
TGTCAGATTGTGGAGCTGTT+GGG - chr3_2:65545723-65545742 Msa0418010:intron 45.0%
GGGATCATACATGATGAGCA+AGG - chr3_2:65545743-65545762 Msa0418010:intron 45.0%
AGGGTATGCAAAATCAGCAG+AGG - chr3_2:65545763-65545782 Msa0418010:intron 45.0%
GTTGCTGATGTTCTTCATGC+TGG - chr3_2:65545791-65545810 Msa0418010:intron 45.0%
! ATGGCTACAGGAGTACAAGT+GGG + chr3_2:65546071-65546090 None:intergenic 45.0%
!!! GTTGCACTGCTGATTTTGCA+TGG + chr3_2:65546833-65546852 None:intergenic 45.0%
GCACGGTCTATTCGAACTAT+AGG + chr3_2:65546867-65546886 None:intergenic 45.0%
ATGCCAAATGGAAGCTTTGC+TGG + chr3_2:65546942-65546961 None:intergenic 45.0%
GCTCTTGAAGCTGCAAGAAA+CGG - chr3_2:65547005-65547024 Msa0418010:CDS 45.0%
!! AAAGGGGAAGCATTGGCATT+AGG + chr3_2:65547104-65547123 None:intergenic 45.0%
GCTTCCCCTTTAACTCTTCT+AGG - chr3_2:65547113-65547132 Msa0418010:intron 45.0%
!!! AAGGACGCTGTTTTTCATCC+TGG - chr3_2:65547197-65547216 Msa0418010:intron 45.0%
TTTCATCCTGGTTGTGATGG+TGG - chr3_2:65547209-65547228 Msa0418010:intron 45.0%
ATTTGAGCCGAAGCACACTT+TGG + chr3_2:65547236-65547255 None:intergenic 45.0%
AACTGGTCGCTTAGAAGCTT+TGG + chr3_2:65547399-65547418 None:intergenic 45.0%
!!! ATTTTGGTGCTCCTTTGTGG+AGG - chr3_2:65547419-65547438 Msa0418010:intron 45.0%
!! ATTGGAGGTATTATCTGGGC+TGG - chr3_2:65547479-65547498 Msa0418010:intron 45.0%
!! ATTATCTGGGCTGGTTATCC+CGG - chr3_2:65547488-65547507 Msa0418010:intron 45.0%
GCGCTTGCACAGATTATCTT+CGG - chr3_2:65547527-65547546 Msa0418010:intron 45.0%
AGTCATGAATGCAATGCAGG+AGG - chr3_2:65548000-65548019 Msa0418010:intron 45.0%
GAGGAAGACTGCCAATTACT+TGG - chr3_2:65548019-65548038 Msa0418010:intron 45.0%
CTCATCCTCATGTCTGTCAT+TGG + chr3_2:65548069-65548088 None:intergenic 45.0%
GGTCCTACGGTGTATGAATT+TGG - chr3_2:65548138-65548157 Msa0418010:intron 45.0%
TGGCCAAATTCATACACCGT+AGG + chr3_2:65548144-65548163 None:intergenic 45.0%
ACGGTGTATGAATTTGGCCA+TGG - chr3_2:65548144-65548163 Msa0418010:intron 45.0%
ACCATGGAAACATTGTAGGG+AGG - chr3_2:65548349-65548368 Msa0418010:intron 45.0%
!! CTTCCGGTTCGATGTTTTAG+TGG + chr3_2:65548399-65548418 None:intergenic 45.0%
TGTTGTTAGATGCAGGGGAA+AGG - chr3_2:65548451-65548470 Msa0418010:CDS 45.0%
GCTCGACTAAGATGTTCACA+AGG + chr3_2:65548501-65548520 None:intergenic 45.0%
! AGGGTCTCATTTGTTGCATG+TGG - chr3_2:65548551-65548570 Msa0418010:CDS 45.0%
! GGGTCTCATTTGTTGCATGT+GGG - chr3_2:65548552-65548571 Msa0418010:CDS 45.0%
!!! ATATACAAATATTTTAAAAA+TGG - chr3_2:65546618-65546637 Msa0418010:intron 5.0%
TGGAAGCGAGAGTGAGGAAA+AGG + chr3_2:65543260-65543279 None:intergenic 50.0%
GTATCCCTGGTTATCAGTGG+TGG - chr3_2:65543463-65543482 Msa0418010:CDS 50.0%
CACTCCACCACTGATAACCA+GGG + chr3_2:65543470-65543489 None:intergenic 50.0%
TCACTCCACCACTGATAACC+AGG + chr3_2:65543471-65543490 None:intergenic 50.0%
! TGGTGGAGTGAAGCACTTCA+TGG - chr3_2:65543480-65543499 Msa0418010:CDS 50.0%
GGTCGTGGGATCTTCTTCAA+TGG - chr3_2:65543516-65543535 Msa0418010:CDS 50.0%
TTGAGGGAAGCTAGTTGCAG+AGG + chr3_2:65543550-65543569 None:intergenic 50.0%
TATAGGGGGTCAAATCGTGG+GGG + chr3_2:65544093-65544112 None:intergenic 50.0%
CGTACAACCGCAATACTTGG+GGG - chr3_2:65544435-65544454 Msa0418010:intron 50.0%
CAACTCCCCTGATACCGATA+TGG + chr3_2:65544559-65544578 None:intergenic 50.0%
ATTGAGCAAGGACGAGCTAG+TGG - chr3_2:65545482-65545501 Msa0418010:intron 50.0%
GTGTCAGATTGTGGAGCTGT+TGG - chr3_2:65545722-65545741 Msa0418010:intron 50.0%
! CATGGCTACAGGAGTACAAG+TGG + chr3_2:65546072-65546091 None:intergenic 50.0%
ACTGAGAGACACATGGCTAC+AGG + chr3_2:65546083-65546102 None:intergenic 50.0%
GACTGAGACTGAGAGACACA+TGG + chr3_2:65546090-65546109 None:intergenic 50.0%
! GCAGGGATGGATCTAGAATG+TGG - chr3_2:65546792-65546811 Msa0418010:CDS 50.0%
TTTGGTCCACCATCACAACC+AGG + chr3_2:65547218-65547237 None:intergenic 50.0%
! TGGTGGACCAAAGTGTGCTT+CGG - chr3_2:65547226-65547245 Msa0418010:intron 50.0%
TGCTTCGGCTCAAATAGACG+AGG - chr3_2:65547241-65547260 Msa0418010:intron 50.0%
!! CGTGTTCATCTTGACTTGCC+AGG - chr3_2:65547344-65547363 Msa0418010:intron 50.0%
! ATGAGCTCAAGTTGCTTGCC+TGG + chr3_2:65547365-65547384 None:intergenic 50.0%
ATCTTCGGTGACCACAATCC+AGG - chr3_2:65547542-65547561 Msa0418010:intron 50.0%
GTAAGTTCGTCCTGGATAGC+CGG + chr3_2:65548106-65548125 None:intergenic 50.0%
! TGAGACCGACATGCTTTTGC+AGG + chr3_2:65548310-65548329 None:intergenic 50.0%
ATGTCGGTCTCAGTCACAGT+TGG - chr3_2:65548318-65548337 Msa0418010:intron 50.0%
GCCTCCCTACAATGTTTCCA+TGG + chr3_2:65548353-65548372 None:intergenic 50.0%
ACATCTTAGTCGAGCGAACG+AGG - chr3_2:65548506-65548525 Msa0418010:CDS 50.0%
! CTGAGTTGGAAGCGAGAGTG+AGG + chr3_2:65543266-65543285 None:intergenic 55.0%
GCTCCTCCCATTCCTAGACT+TGG - chr3_2:65543441-65543460 Msa0418010:CDS 55.0%
!! CCTGACCGATTCGGTACCAA+AGG + chr3_2:65543605-65543624 None:intergenic 55.0%
! CCTTTGGTACCGAATCGGTC+AGG - chr3_2:65543602-65543621 Msa0418010:CDS 55.0%
GGTAGTACCCCCTCCCAATT+TGG - chr3_2:65544131-65544150 Msa0418010:intron 55.0%
CGATGGTGACAGTGCTGTGA+CGG + chr3_2:65544648-65544667 None:intergenic 55.0%
CGTCACAGCACTGTCACCAT+CGG - chr3_2:65544646-65544665 Msa0418010:CDS 55.0%
TCTTGTCCTCTCCCCCATCT+TGG + chr3_2:65545036-65545055 None:intergenic 55.0%
GGGAGAGGACAAGAAACAGC+TGG - chr3_2:65545042-65545061 Msa0418010:CDS 55.0%
!! CGCGAGCATCGAAGTGAAAG+CGG + chr3_2:65545224-65545243 None:intergenic 55.0%
GCTGGTTATCCCGGTGAACT+CGG - chr3_2:65547497-65547516 Msa0418010:intron 55.0%
ATGAGAGCTGATCCCGCAAC+CGG - chr3_2:65548084-65548103 Msa0418010:intron 55.0%
GCAGGGGAAAGGAGACATGT+TGG - chr3_2:65548462-65548481 Msa0418010:CDS 55.0%
AGGGATCCAAGATGGGGGAG+AGG - chr3_2:65545027-65545046 Msa0418010:CDS 60.0%
GGTTATCCCGGTGAACTCGG+AGG - chr3_2:65547500-65547519 Msa0418010:intron 60.0%
GCAATGCCTCCGAGTTCACC+GGG + chr3_2:65547509-65547528 None:intergenic 60.0%
CGCAATGCCTCCGAGTTCAC+CGG + chr3_2:65547510-65547529 None:intergenic 60.0%
TCGTCCTGGATAGCCGGTTG+CGG + chr3_2:65548100-65548119 None:intergenic 60.0%
CTTAGTCGAGCGAACGAGGC+TGG - chr3_2:65548510-65548529 Msa0418010:CDS 60.0%
GATCCCGCAACCGGCTATCC+AGG - chr3_2:65548093-65548112 Msa0418010:intron 65.0%
CGTCCTGGATAGCCGGTTGC+GGG + chr3_2:65548099-65548118 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 65543168 65548850 65543168 ID=Msa0418010;Name=Msa0418010
chr3_2 mRNA 65543168 65548850 65543168 ID=Msa0418010-mRNA-1;Parent=Msa0418010;Name=Msa0418010-mRNA-1;_AED=0.07;_eAED=0.07;_QI=48|1|1|1|1|1|6|242|777
chr3_2 exon 65543168 65543999 65543168 ID=Msa0418010-mRNA-1:exon:14810;Parent=Msa0418010-mRNA-1
chr3_2 exon 65544455 65545222 65544455 ID=Msa0418010-mRNA-1:exon:14809;Parent=Msa0418010-mRNA-1
chr3_2 exon 65546206 65546303 65546206 ID=Msa0418010-mRNA-1:exon:14808;Parent=Msa0418010-mRNA-1
chr3_2 exon 65546418 65546587 65546418 ID=Msa0418010-mRNA-1:exon:14807;Parent=Msa0418010-mRNA-1
chr3_2 exon 65546776 65547075 65546776 ID=Msa0418010-mRNA-1:exon:14806;Parent=Msa0418010-mRNA-1
chr3_2 exon 65548395 65548850 65548395 ID=Msa0418010-mRNA-1:exon:14805;Parent=Msa0418010-mRNA-1
chr3_2 five_prime_UTR 65548803 65548850 65548803 ID=Msa0418010-mRNA-1:five_prime_utr;Parent=Msa0418010-mRNA-1
chr3_2 CDS 65548395 65548802 65548395 ID=Msa0418010-mRNA-1:cds;Parent=Msa0418010-mRNA-1
chr3_2 CDS 65546776 65547075 65546776 ID=Msa0418010-mRNA-1:cds;Parent=Msa0418010-mRNA-1
chr3_2 CDS 65546418 65546587 65546418 ID=Msa0418010-mRNA-1:cds;Parent=Msa0418010-mRNA-1
chr3_2 CDS 65546206 65546303 65546206 ID=Msa0418010-mRNA-1:cds;Parent=Msa0418010-mRNA-1
chr3_2 CDS 65544455 65545222 65544455 ID=Msa0418010-mRNA-1:cds;Parent=Msa0418010-mRNA-1
chr3_2 CDS 65543410 65543999 65543410 ID=Msa0418010-mRNA-1:cds;Parent=Msa0418010-mRNA-1
chr3_2 three_prime_UTR 65543168 65543409 65543168 ID=Msa0418010-mRNA-1:three_prime_utr;Parent=Msa0418010-mRNA-1
Gene Sequence

>Msa0418010

ATGGCCCTCTCATCAACCTTTACCTTTGTCACCATCATCTTCCTTTTCCTCACTCTCGCTTCCAACTCAGTGCTTGCTCAACTACCACCATTTGCTTGTGATTATTCAAACCCATCAACCAGATCCTACCCATTTTGCAACCCAAAGCTTCCGATCACTCAAAGAACCAAAGACCTTGTTTTAAGACTCACATTGGATGAGAAACTTGCTCAACTAGTTAACTCAGCTCCTCCCATTCCTAGACTTGGTATCCCTGGTTATCAGTGGTGGAGTGAAGCACTTCATGGAATTGGTAATGTTGGTCGTGGGATCTTCTTCAATGGAAGTATCACCTCTGCAACTAGCTTCCCTCAAGTTATTACTACAGCAGCTAGCTTTGATTCTCACCTTTGGTACCGAATCGGTCAGGCAATTGGGGTTGAAGCGAGAGCAATATACAATGGAGGACAAGCAATGGGGATGACATTTTGGGCTCCAAACATAAACATATTTAGGGATCCAAGATGGGGGAGAGGACAAGAAACAGCTGGTGAAGATCCTATGATGACTTCTAACTATGCTGTTTCCTATGTTAGAGGACTTCAAGGTGATTCCTTTCAAGGTGGTAAATTGAGGGGACACCTTCAAGCTTCTGCTTGTTGCAAACATTTCACTGCCTATGATTTGGACAATTGGAAGGGTGTTAACCGCTTTCACTTCGATGCTCGCGTGAGTTTACAAGATTTAGCAGACACATATCAACCACCATTTCGTAGTTGCATTGAGCAAGGACGAGCTAGTGGAATAATGTGTGCTTATAACCGTGTAAATGGGGTTCCAAGTTGTGCCGATTTCAATCTCTTAACAAATACTGTTAGAAAACAATGGGAATTCCACGGGTATATTGTGTCAGATTGTGGAGCTGTTGGGATCATACATGATGAGCAAGGGTATGCAAAATCAGCAGAGGATGCTGTTGCTGATGTTCTTCATGCTGGGATGGATCTAGAATGTGGAAGTTATTTGACAGACCATGCAAAATCAGCAGTGCAACAGAAAAAATTACCTATAGTTCGAATAGACCGTGCCCTTCACAATCTATTTTCAATTAGAATAAGGCTAGGCCTATTTGATGGAAATCCAGCAAAGCTTCCATTTGGCATGATTGGTTCCAACCATGTCTGTTCCGAAAATCATTTATATCTAGCTCTTGAAGCTGCAAGAAACGGCATTGTCCTTTTAAAGAACACTGCTTCACTTCTTCCACTTCCAAAAACTAGTATTTCCTTAGCAGTCATAGGTCCTAATGCCAATGCTTCCCCTTTAACTCTTCTAGGAAACTATGCTGGCCCTCCTTGTAAATCTATTTCTATACTTCAAGGGTTTCACCACTATGTTAAGGACGCTGTTTTTCATCCTGGTTGTGATGGTGGACCAAAGTGTGCTTCGGCTCAAATAGACGAGGCAGTGAAAGTTGCTAAGAATGCGGATTATGTTGTTCTTGTTATGGGATTGGATCAAAGTGTAGAGAGGGAAGAGCGTGATCGTGTTCATCTTGACTTGCCAGGCAAGCAACTTGAGCTCATTAACATTGTTGCCAAAGCTTCTAAGCGACCAGTTATTTTGGTGCTCCTTTGTGGAGGTCCTATAGATATTAGTTCAGCTAAAAATGACGATAAAATTGGAGGTATTATCTGGGCTGGTTATCCCGGTGAACTCGGAGGCATTGCGCTTGCACAGATTATCTTCGGTGACCACAATCCAGGAGGAAGACTGCCAATTACTTGGTACCCAAAAGATTACATTAAAGTTCCAATGACAGACATGAGGATGAGAGCTGATCCCGCAACCGGCTATCCAGGACGAACTTACAGATTTTACAAGGGTCCTACGGTGTATGAATTTGGCCATGGACTAAGCTACACAAAATATTCCTACGAGTTTGTTTCCGTTACACACGACAAACTTCATTTCAATCATTCGTCCACTCATTTGATGGCTGAAAATTCAGAAACCATAAGGTACAAATTAGTTTCAGAGTTAGGTGAAGAAACCTGCAAAAGCATGTCGGTCTCAGTCACAGTTGGAGTAAAAAACCATGGAAACATTGTAGGGAGGCATCCTATATTGCTGTTTACGAGACCACTAAAACATCGAACCGGAAGTCCTATGAAACAATTGGTAGGTTTTCATAGTTTGTTGTTAGATGCAGGGGAAAGGAGACATGTTGGATTTGAGCTTAGTCCTTGTGAACATCTTAGTCGAGCGAACGAGGCTGGTTTGAAGATCATAGAAGAAGGGTCTCATTTGTTGCATGTGGGTGAAGAAGAGTACCTGATAGATATCATTGTTTGA
Protein sequence

>Msa0418010

MALSSTFTFVTIIFLFLTLASNSVLAQLPPFACDYSNPSTRSYPFCNPKLPITQRTKDLVLRLTLDEKLAQLVNSAPPIPRLGIPGYQWWSEALHGIGNVGRGIFFNGSITSATSFPQVITTAASFDSHLWYRIGQAIGVEARAIYNGGQAMGMTFWAPNINIFRDPRWGRGQETAGEDPMMTSNYAVSYVRGLQGDSFQGGKLRGHLQASACCKHFTAYDLDNWKGVNRFHFDARVSLQDLADTYQPPFRSCIEQGRASGIMCAYNRVNGVPSCADFNLLTNTVRKQWEFHGYIVSDCGAVGIIHDEQGYAKSAEDAVADVLHAGMDLECGSYLTDHAKSAVQQKKLPIVRIDRALHNLFSIRIRLGLFDGNPAKLPFGMIGSNHVCSENHLYLALEAARNGIVLLKNTASLLPLPKTSISLAVIGPNANASPLTLLGNYAGPPCKSISILQGFHHYVKDAVFHPGCDGGPKCASAQIDEAVKVAKNADYVVLVMGLDQSVEREERDRVHLDLPGKQLELINIVAKASKRPVILVLLCGGPIDISSAKNDDKIGGIIWAGYPGELGGIALAQIIFGDHNPGGRLPITWYPKDYIKVPMTDMRMRADPATGYPGRTYRFYKGPTVYEFGHGLSYTKYSYEFVSVTHDKLHFNHSSTHLMAENSETIRYKLVSELGEETCKSMSVSVTVGVKNHGNIVGRHPILLFTRPLKHRTGSPMKQLVGFHSLLLDAGERRHVGFELSPCEHLSRANEAGLKIIEEGSHLLHVGEEEYLIDIIV*