AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0644410


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0644410 MtrunA17_Chr4g0031621 98.837 258 3 0 1 258 1 258 0.0 527
Msa0644410 MtrunA17_Chr2g0328261 86.822 258 34 0 1 258 3 260 5.64e-173 477
Msa0644410 MtrunA17_Chr5g0435311 82.143 252 41 1 7 258 61 308 1.02e-161 450
Msa0644410 MtrunA17_Chr7g0238681 82.353 255 44 1 5 258 4 258 1.78e-159 442
Msa0644410 MtrunA17_Chr5g0417701 71.179 229 64 1 29 257 22 248 2.94e-123 350
Msa0644410 MtrunA17_Chr3g0128801 64.314 255 86 3 5 256 1 253 8.49e-123 350
Msa0644410 MtrunA17_Chr3g0128791 64.173 254 86 3 5 256 3 253 1.31e-121 347
Msa0644410 MtrunA17_Chr4g0042521 65.600 250 79 3 5 253 1 244 3.11e-121 345
Msa0644410 MtrunA17_Chr3g0092071 69.778 225 66 1 32 256 25 247 1.44e-118 338
Msa0644410 MtrunA17_Chr5g0432611 63.386 254 88 3 5 256 1 251 1.57e-118 339
Msa0644410 MtrunA17_Chr3g0107291 62.891 256 93 1 1 256 7 260 7.27e-117 335
Msa0644410 MtrunA17_Chr3g0107311 63.035 257 91 3 1 256 1 254 4.19e-116 333
Msa0644410 MtrunA17_Chr7g0217661 63.265 245 80 2 12 256 6 240 1.99e-114 328
Msa0644410 MtrunA17_Chr6g0453341 62.846 253 84 2 4 256 10 252 5.26e-106 307
Msa0644410 MtrunA17_Chr1g0193631 60.744 242 87 4 16 254 18 254 1.72e-105 306
Msa0644410 MtrunA17_Chr7g0271001 56.917 253 101 4 2 251 1 248 2.40e-105 305
Msa0644410 MtrunA17_Chr4g0069711 59.471 227 89 2 30 255 59 283 2.81e-103 301
Msa0644410 MtrunA17_Chr1g0157061 61.062 226 84 3 32 254 14 238 2.98e-96 282
Msa0644410 MtrunA17_Chr7g0218751 57.399 223 93 1 32 254 28 248 2.85e-94 277
Msa0644410 MtrunA17_Chr8g0360041 56.757 222 94 1 32 253 31 250 9.93e-94 276
Msa0644410 MtrunA17_Chr7g0218741 53.333 240 107 3 16 254 15 250 2.04e-92 273
Msa0644410 MtrunA17_Chr4g0057091 50.787 254 122 3 6 257 10 262 6.88e-92 271
Msa0644410 MtrunA17_Chr5g0398271 50.000 250 123 2 6 254 11 259 7.51e-91 269
Msa0644410 MtrunA17_Chr7g0218761 59.804 204 80 1 51 254 8 209 5.75e-89 262
Msa0644410 MtrunA17_Chr4g0021561 48.000 250 124 1 7 256 13 256 3.10e-88 262
Msa0644410 MtrunA17_Chr5g0433841 55.310 226 100 1 31 256 40 264 4.95e-88 262
Msa0644410 MtrunA17_Chr8g0360721 58.706 201 81 1 51 251 17 215 1.50e-87 259
Msa0644410 MtrunA17_Chr3g0109801 52.766 235 102 5 31 257 52 285 1.62e-80 243
Msa0644410 MtrunA17_Chr4g0022841 59.483 116 47 0 138 253 1 116 1.98e-45 148
Msa0644410 MtrunA17_Chr4g0022851 55.556 126 48 3 5 129 7 125 1.82e-43 143
Msa0644410 MtrunA17_Chr2g0324191 46.154 130 70 0 27 156 23 152 1.41e-41 139
Msa0644410 MtrunA17_Chr2g0324181 51.485 101 49 0 156 256 17 117 7.14e-32 113
Msa0644410 MtrunA17_Chr2g0324221 29.218 243 146 8 24 254 27 255 9.76e-25 99.0
Msa0644410 MtrunA17_Chr2g0324201 28.195 266 162 10 4 254 2 253 6.36e-23 94.4
Msa0644410 MtrunA17_Chr4g0021641 31.356 236 136 10 31 254 40 261 1.22e-22 93.6
Msa0644410 MtrunA17_Chr8g0359981 51.163 86 33 4 74 156 2 81 3.09e-21 86.3
Msa0644410 MtrunA17_Chr8g0359971 45.000 80 43 1 177 255 1 80 5.15e-19 79.3
Msa0644410 MtrunA17_Chr4g0012801 29.237 236 132 11 32 251 42 258 3.31e-18 81.6
Msa0644410 MtrunA17_Chr7g0231221 28.571 231 135 12 37 251 53 269 1.54e-16 77.0
Msa0644410 MtrunA17_Chr7g0231211 28.926 242 136 13 27 251 42 264 7.42e-16 75.1
Msa0644410 MtrunA17_Chr5g0399811 25.991 227 151 9 35 254 32 248 7.86e-14 69.3
Msa0644410 MtrunA17_Chr4g0055561 25.751 233 152 10 28 251 24 244 2.77e-13 67.8
Msa0644410 MtrunA17_Chr4g0038741 28.000 225 127 9 43 251 32 237 3.48e-13 67.4
Msa0644410 MtrunA17_Chr1g0193571 52.542 59 27 1 201 258 4 62 4.80e-13 62.8
Msa0644410 MtrunA17_Chr4g0055061 24.409 254 169 10 8 251 6 246 6.10e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0644410 AT2G39700.1 83.399 253 42 0 6 258 5 257 4.37e-162 449
Msa0644410 AT2G28950.1 83.529 255 41 1 5 258 3 257 2.33e-155 432
Msa0644410 AT3G55500.1 77.734 256 57 0 3 258 5 260 4.07e-153 427
Msa0644410 AT2G37640.1 79.051 253 53 0 6 258 10 262 1.65e-152 426
Msa0644410 AT5G02260.1 74.419 258 66 0 1 258 1 258 2.55e-151 422
Msa0644410 AT2G37640.2 81.905 210 38 0 49 258 28 237 4.22e-131 370
Msa0644410 AT1G69530.2 66.403 253 82 2 5 257 1 250 1.44e-123 352
Msa0644410 AT1G69530.1 66.403 253 82 2 5 257 1 250 1.44e-123 352
Msa0644410 AT1G69530.3 66.008 253 83 2 5 257 1 250 6.82e-122 348
Msa0644410 AT5G56320.1 65.234 256 82 3 5 257 1 252 4.17e-121 346
Msa0644410 AT5G56320.2 65.234 256 82 3 5 257 1 252 4.17e-121 346
Msa0644410 AT5G56320.3 67.769 242 74 2 16 257 15 252 2.05e-120 346
Msa0644410 AT2G03090.1 71.681 226 62 1 32 257 30 253 3.29e-120 343
Msa0644410 AT1G26770.1 66.403 253 81 2 5 257 1 249 4.94e-117 335
Msa0644410 AT1G26770.2 66.142 254 82 2 4 257 10 259 6.61e-117 335
Msa0644410 AT5G05290.1 63.745 251 87 3 7 256 8 255 1.35e-115 332
Msa0644410 AT2G40610.1 61.719 256 92 3 2 256 3 253 9.09e-115 330
Msa0644410 AT3G29030.1 65.929 226 68 2 32 257 38 254 3.78e-110 318
Msa0644410 AT1G69530.4 61.265 253 65 3 5 257 1 220 8.03e-108 311
Msa0644410 AT4G01630.1 61.044 249 88 5 6 251 7 249 2.20e-107 311
Msa0644410 AT1G69530.5 60.870 253 66 3 5 257 1 220 2.46e-106 308
Msa0644410 AT1G20190.1 61.086 221 83 2 34 252 28 247 3.37e-96 283
Msa0644410 AT5G39290.1 50.000 278 111 5 1 254 3 276 1.98e-95 281
Msa0644410 AT5G39270.1 50.000 278 111 5 1 254 3 276 1.15e-94 280
Msa0644410 AT1G62980.1 53.200 250 115 2 6 254 5 253 6.76e-93 274
Msa0644410 AT5G39280.1 55.157 223 96 2 32 254 54 272 9.20e-90 267
Msa0644410 AT1G12560.1 51.172 256 118 5 4 257 12 262 2.77e-89 265
Msa0644410 AT5G39300.1 54.709 223 97 2 32 254 55 273 6.77e-89 265
Msa0644410 AT5G39310.1 54.464 224 97 3 32 254 90 309 2.92e-86 259
Msa0644410 AT3G03220.1 53.509 228 105 1 31 258 39 265 4.26e-86 257
Msa0644410 AT4G38210.1 46.311 244 129 1 16 257 12 255 1.74e-80 243
Msa0644410 AT3G15370.1 47.368 247 119 6 12 254 8 247 3.02e-76 232
Msa0644410 AT5G39260.1 47.191 267 120 6 1 255 3 260 3.80e-76 232
Msa0644410 AT1G20190.2 57.447 188 77 2 67 252 2 188 6.46e-75 226
Msa0644410 AT3G15370.2 42.238 277 119 7 12 254 8 277 9.92e-70 216
Msa0644410 AT4G28250.1 30.705 241 138 11 28 254 32 257 1.05e-23 97.1
Msa0644410 AT2G20750.1 28.692 237 145 8 31 254 39 264 7.50e-22 92.0
Msa0644410 AT1G65680.1 30.126 239 138 11 28 251 43 267 4.17e-20 87.4
Msa0644410 AT4G28250.2 29.583 240 136 11 28 254 32 251 6.42e-20 86.7
Msa0644410 AT2G20750.2 32.386 176 97 7 31 195 39 203 4.02e-16 75.5
Msa0644410 AT4G28250.4 32.240 183 95 8 28 200 32 195 1.25e-15 73.9
Msa0644410 AT4G28250.3 32.584 178 91 8 28 195 32 190 8.19e-15 71.6
Msa0644410 AT3G60570.1 23.194 263 173 8 10 258 12 259 2.10e-13 68.6
Msa0644410 AT4G17030.1 24.757 206 140 6 9 209 4 199 1.87e-12 65.9
Msa0644410 AT3G45970.2 25.000 212 137 9 51 251 15 215 6.41e-12 63.9

Find 100 sgRNAs with CRISPR-Local

Find 205 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAGCAATGTAGAGCATTT+TGG 0.171716 4_3:+48273291 None:intergenic
TCACTTGCTTGAGCAAAATT+AGG 0.238221 4_3:+48272704 None:intergenic
GCTCCTCCTAGTTGGCAATT+TGG 0.267981 4_3:-48270722 Msa0644410:CDS
GACAAAGAGTGGTGTCATTC+TGG 0.278401 4_3:-48272767 Msa0644410:CDS
GATGCTCATGCTACTTTCTA+TGG 0.315789 4_3:-48273199 Msa0644410:CDS
GGAGAATGGAGTAGTACTTA+TGG 0.333606 4_3:+48273432 None:intergenic
GCCAGTTCTGACCCCAGTTT+CGG 0.341334 4_3:+48270828 None:intergenic
TGATTTGTCTTGGTTATTGA+TGG 0.348494 4_3:-48270498 Msa0644410:three_prime_UTR
GGATGCCACTGAGCCGAAAC+TGG 0.348922 4_3:-48270841 Msa0644410:CDS
TGGTTTACAACTTGCATTGT+AGG 0.350657 4_3:+48273468 None:intergenic
TTTGCTCAAGCAAGTGATAA+TGG 0.368817 4_3:-48272698 Msa0644410:CDS
AACCTACCCTAGAGATTGAT+TGG 0.386084 4_3:+48273377 None:intergenic
TATGGCGGATCTGATGCTTC+TGG 0.387323 4_3:-48273181 Msa0644410:CDS
CAATTTGGTCAAACTTTCAC+TGG 0.389947 4_3:-48270707 Msa0644410:CDS
ACTAACCTGCGGTAAGCAAC+AGG 0.390868 4_3:+48272590 None:intergenic
GGTTTACAACTTGCATTGTA+GGG 0.393654 4_3:+48273469 None:intergenic
ATTGTTGAAGCTAGAATTCC+AGG 0.394127 4_3:-48273247 Msa0644410:CDS
CAGTGGCATCCACTCGGTTC+GGG 0.402414 4_3:+48270853 None:intergenic
TCAGTGGCATCCACTCGGTT+CGG 0.423453 4_3:+48270852 None:intergenic
ATTGGGAGGTGAGAGTTGAT+TGG 0.432169 4_3:+48273395 None:intergenic
CTTATGGAGTTGGGAAGTGC+TGG 0.436835 4_3:+48273448 None:intergenic
GGAGTAGTACTTATGGAGTT+GGG 0.438231 4_3:+48273439 None:intergenic
GACTAGGTGTTGATTTGTCT+TGG 0.439194 4_3:-48270508 Msa0644410:three_prime_UTR
TGTCTTGGTTATTGATGGTA+GGG 0.442385 4_3:-48270493 Msa0644410:three_prime_UTR
ACCGTAGATCTTCAACATCT+TGG 0.445386 4_3:-48270751 Msa0644410:CDS
GCCGAAACTGGGGTCAGAAC+TGG 0.448238 4_3:-48270829 Msa0644410:CDS
CGGATTCCGTTACTTTAACC+TGG 0.456362 4_3:-48270933 Msa0644410:CDS
GTTTGACCAAATTGCCAACT+AGG 0.460335 4_3:+48270716 None:intergenic
GCAGTGAGAGTGTGGGAGAA+TGG 0.465079 4_3:+48273418 None:intergenic
TGGAGTAGTACTTATGGAGT+TGG 0.467604 4_3:+48273438 None:intergenic
TTGATTGGGCAGTGAGAGTG+TGG 0.470404 4_3:+48273410 None:intergenic
TCACCTCCCAATCAATCTCT+AGG 0.479472 4_3:-48273384 Msa0644410:five_prime_UTR
TTGTCTTGGTTATTGATGGT+AGG 0.485720 4_3:-48270494 Msa0644410:three_prime_UTR
TTGGGAGGTGAGAGTTGATT+GGG 0.487228 4_3:+48273396 None:intergenic
GGAACATTGCTCCTCCTAGT+TGG 0.491170 4_3:-48270730 Msa0644410:CDS
GCTGAAAGTGGCTAAACAAA+TGG 0.493988 4_3:-48270378 Msa0644410:three_prime_UTR
GTAGCAGTAATGAAAATTGA+AGG 0.495390 4_3:+48272740 None:intergenic
TTATATAACTAATGTAATGA+AGG 0.497545 4_3:-48270453 Msa0644410:three_prime_UTR
AATTTGTATGCTACTAGAGA+AGG 0.508073 4_3:-48270420 Msa0644410:three_prime_UTR
TTAGGAGGAGCATGTGGGTA+CGG 0.517583 4_3:-48272896 Msa0644410:intron
GTGTTTACTCTGGTGGTCAA+TGG 0.521019 4_3:-48273225 Msa0644410:CDS
TAATCAAAGTGATAAGCAAA+TGG 0.521796 4_3:+48270293 None:intergenic
TTGTCCCTGTTGCTTACCGC+AGG 0.522475 4_3:-48272595 Msa0644410:intron
TCAGCAATCTTAAGAAACAT+AGG 0.524078 4_3:+48272632 None:intergenic
ATCTGATGCTTCTGGCACCA+TGG 0.526475 4_3:-48273173 Msa0644410:CDS
AATTTGTACAGTCAAGGTTA+CGG 0.526954 4_3:-48272872 Msa0644410:CDS
ATTAGCAACGTAGCAGGTGC+TGG 0.528629 4_3:-48270905 Msa0644410:CDS
GTGCTAATTAGCAACGTAGC+AGG 0.532373 4_3:-48270911 Msa0644410:CDS
CTACGTTGCTAATTAGCACC+AGG 0.535801 4_3:+48270915 None:intergenic
TCTGATGCTTCTGGCACCAT+GGG 0.536460 4_3:-48273172 Msa0644410:intron
AGAATTCCAGGTGTTTACTC+TGG 0.536978 4_3:-48273235 Msa0644410:CDS
ACCTACCCTAGAGATTGATT+GGG 0.539903 4_3:+48273378 None:intergenic
AAAGTAACGGAATCCGTTCA+CGG 0.539938 4_3:+48270940 None:intergenic
TTGGTGAGAATGAGATGGAT+GGG 0.542387 4_3:-48270559 Msa0644410:three_prime_UTR
TCCAAGATGTTGAAGATCTA+CGG 0.544252 4_3:+48270750 None:intergenic
GATGCCACTGAGCCGAAACT+GGG 0.544292 4_3:-48270840 Msa0644410:CDS
TGGTGAGAATGAGATGGATG+GGG 0.545644 4_3:-48270558 Msa0644410:three_prime_UTR
AGAGAAGGAAAGCGAAAGGT+AGG 0.545681 4_3:-48270405 Msa0644410:three_prime_UTR
GGAATAAGATTCACCGTGAA+CGG 0.547347 4_3:-48270953 Msa0644410:CDS
CTTTGATTAAGTGTTTGTGT+TGG 0.550603 4_3:-48270279 Msa0644410:three_prime_UTR
ATCGTGCGCGCCTACGTGAA+AGG 0.554876 4_3:-48270878 Msa0644410:CDS
TACGGAAATTTGTACAGTCA+AGG 0.556701 4_3:-48272878 Msa0644410:CDS
ATTCCACCACGCTTTCTGCA+TGG 0.558295 4_3:+48270971 None:intergenic
AAACACGAAAGGACAAAGCC+TGG 0.564825 4_3:+48270783 None:intergenic
ATTCCAGGTGTTTACTCTGG+TGG 0.567430 4_3:-48273232 Msa0644410:CDS
AAGATTGCTGAGTATCGTGC+TGG 0.570660 4_3:-48272620 Msa0644410:CDS
TGACCACCAGAGTAAACACC+TGG 0.570964 4_3:+48273229 None:intergenic
AGCACTGCTTTGTTCAACAA+TGG 0.578791 4_3:-48272830 Msa0644410:CDS
GGTTCGGGTTCCTTTCACGT+AGG 0.581009 4_3:+48270868 None:intergenic
CACCTCCCAATCAATCTCTA+GGG 0.584744 4_3:-48273383 Msa0644410:five_prime_UTR
TCGGCTCAGTGGCATCCACT+CGG 0.585195 4_3:+48270847 None:intergenic
TTTGGTGAGAATGAGATGGA+TGG 0.590739 4_3:-48270560 Msa0644410:three_prime_UTR
CTTGCTTGAGCAAAATTAGG+AGG 0.594414 4_3:+48272707 None:intergenic
TACCCTAGAGATTGATTGGG+AGG 0.598826 4_3:+48273381 None:intergenic
TTCAACAATGGTTTAAGCTG+TGG 0.599006 4_3:-48272818 Msa0644410:CDS
GTTTACAACTTGCATTGTAG+GGG 0.600193 4_3:+48273470 None:intergenic
AAGGTAGGAAATGCTGAAAG+TGG 0.601780 4_3:-48270390 Msa0644410:three_prime_UTR
TACTAGAGAAGGAAAGCGAA+AGG 0.602464 4_3:-48270409 Msa0644410:three_prime_UTR
TTAGCACCAGGTTAAAGTAA+CGG 0.608652 4_3:+48270927 None:intergenic
GGCATAGCAAGATCAAAATG+AGG 0.611060 4_3:+48272653 None:intergenic
TGACCCCAGTTTCGGCTCAG+TGG 0.625730 4_3:+48270836 None:intergenic
TGATTGGGCAGTGAGAGTGT+GGG 0.629256 4_3:+48273411 None:intergenic
CTGGCCCACTAAAACCGCGT+TGG 0.630033 4_3:+48270802 None:intergenic
GCAAGATCAAAATGAGGACG+AGG 0.630560 4_3:+48272659 None:intergenic
GTCACTGCTTGAAACACGAA+AGG 0.633040 4_3:+48270772 None:intergenic
TGACCAAATTGCCAACTAGG+AGG 0.638092 4_3:+48270719 None:intergenic
ATGACAAGTTAATTGTGACT+AGG 0.638803 4_3:-48270524 Msa0644410:three_prime_UTR
AGGGTGCCATGCAGAAAGCG+TGG 0.647035 4_3:-48270977 Msa0644410:CDS
AGATCAAAATGAGGACGAGG+AGG 0.649689 4_3:+48272662 None:intergenic
TCCCAATCAATCTCTAGGGT+AGG 0.651811 4_3:-48273379 Msa0644410:five_prime_UTR
TGAAAGGAACCCGAACCGAG+TGG 0.653524 4_3:-48270862 Msa0644410:CDS
AAGCAAGTGATAATGGTGGT+TGG 0.657192 4_3:-48272691 Msa0644410:CDS
GATCAAAATGAGGACGAGGA+GGG 0.663864 4_3:+48272663 None:intergenic
GTGCCATGCAGAAAGCGTGG+TGG 0.676430 4_3:-48270974 Msa0644410:CDS
ATGCCACTGAGCCGAAACTG+GGG 0.678002 4_3:-48270839 Msa0644410:CDS
AGTGTGCAAATGACAAAGAG+TGG 0.680419 4_3:-48272778 Msa0644410:CDS
GCTCATGCTACTTTCTATGG+CGG 0.681392 4_3:-48273196 Msa0644410:CDS
CTAACCTGCGGTAAGCAACA+GGG 0.690792 4_3:+48272591 None:intergenic
GCTCAAGCAAGTGATAATGG+TGG 0.723102 4_3:-48272695 Msa0644410:CDS
TCAGAACTGGCAATCCAACG+CGG 0.772854 4_3:-48270816 Msa0644410:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTATCTTTAAGTTATTT+AGG - chr4_3:48271303-48271322 Msa0644410:intron 10.0%
!!! AAGTTTATTTTATTTTACTT+TGG - chr4_3:48271331-48271350 Msa0644410:intron 10.0%
!! TATACTACTAAAAAAAATTA+AGG + chr4_3:48271781-48271800 None:intergenic 10.0%
!!! TTAATTATCCAATTTTTATA+TGG + chr4_3:48272533-48272552 None:intergenic 10.0%
!!! ATGTTTTTTTAGGTTTAATT+AGG + chr4_3:48270724-48270743 None:intergenic 15.0%
!!! TTTATGTTAATTTTTTGTGT+TGG - chr4_3:48270758-48270777 Msa0644410:CDS 15.0%
!! GAAAAGAAAAAAAAAATTAG+AGG - chr4_3:48271514-48271533 Msa0644410:intron 15.0%
!!! TAAAAATAATATAAAGTACC+AGG - chr4_3:48271551-48271570 Msa0644410:intron 15.0%
!!! TTTTCTTTTTCATTAATTGA+GGG + chr4_3:48271809-48271828 None:intergenic 15.0%
!!! ATATATTATTGACTTTTCTT+TGG - chr4_3:48271836-48271855 Msa0644410:intron 15.0%
!! CTATCTATATTAAATAGAAA+TGG + chr4_3:48272498-48272517 None:intergenic 15.0%
!!! GCTAATATATTTTTTAATGT+TGG - chr4_3:48273043-48273062 Msa0644410:intron 15.0%
!! TTATATAACTAATGTAATGA+AGG - chr4_3:48273229-48273248 Msa0644410:CDS 15.0%
!!! ATATAATTTGTTTTGATGTT+TGG - chr4_3:48273462-48273481 Msa0644410:five_prime_UTR 15.0%
!!! TATAATTTGTTTTGATGTTT+GGG - chr4_3:48273463-48273482 Msa0644410:five_prime_UTR 15.0%
!! AAAAATACTAGAAATAGCTA+TGG - chr4_3:48270365-48270384 Msa0644410:three_prime_UTR 20.0%
!!! GTAACATTTCATGTTTTTTT+AGG + chr4_3:48270734-48270753 None:intergenic 20.0%
!! ATTTCTCTAAATTATATTCC+TGG + chr4_3:48271572-48271591 None:intergenic 20.0%
!!! TTTTTATTGGTCAAAAACAA+TGG + chr4_3:48271688-48271707 None:intergenic 20.0%
!!! CTTGTTTTTTCACTTTTTAT+TGG + chr4_3:48271701-48271720 None:intergenic 20.0%
!! CAATAAAAAGTGAAAAAACA+AGG - chr4_3:48271699-48271718 Msa0644410:intron 20.0%
!!! CTTTTCTTTTTCATTAATTG+AGG + chr4_3:48271810-48271829 None:intergenic 20.0%
!! TATAGTTAAGAAATTAGTTG+TGG - chr4_3:48271870-48271889 Msa0644410:intron 20.0%
!! ATATTTGTACGAACAATTTA+TGG + chr4_3:48272259-48272278 None:intergenic 20.0%
!! TAGCATGTGTAAAAATAAAA+AGG - chr4_3:48272616-48272635 Msa0644410:CDS 20.0%
!!! TATTTTGTTGATATTTACAC+AGG - chr4_3:48272685-48272704 Msa0644410:CDS 20.0%
!!! ATTTTGTTGATATTTACACA+GGG - chr4_3:48272686-48272705 Msa0644410:CDS 20.0%
!!! ATATTTTTTAATGTTGGTTG+AGG - chr4_3:48273049-48273068 Msa0644410:intron 20.0%
!!! TTTTTCTTACTGTTTTTAGT+TGG - chr4_3:48273080-48273099 Msa0644410:intron 20.0%
! AATCACTTTGACATATAGTT+AGG - chr4_3:48270599-48270618 Msa0644410:three_prime_UTR 25.0%
! ATCACTTTGACATATAGTTA+GGG - chr4_3:48270600-48270619 Msa0644410:three_prime_UTR 25.0%
! TATCCACATGTTTGTATTTA+CGG + chr4_3:48270675-48270694 None:intergenic 25.0%
!!! TTTTTTGTGTTGGTGTTTTT+AGG - chr4_3:48270768-48270787 Msa0644410:CDS 25.0%
!! TTTTCTATCAAATAACTGTC+TGG - chr4_3:48271138-48271157 Msa0644410:intron 25.0%
! GATACAAGTGGTAAATATTT+AGG - chr4_3:48271368-48271387 Msa0644410:intron 25.0%
! AATATTTAGGTCTCTTAACA+AGG - chr4_3:48271381-48271400 Msa0644410:intron 25.0%
! AGAAATGAATGAAGTAACTA+GGG + chr4_3:48271952-48271971 None:intergenic 25.0%
! ATGGAAAGAATGAAAAAGAA+AGG + chr4_3:48272240-48272259 None:intergenic 25.0%
! ATGGAAAGAATGAAAAAGAA+AGG + chr4_3:48272240-48272259 None:intergenic 25.0%
! TAAAATATGAGACACTAACA+TGG + chr4_3:48272358-48272377 None:intergenic 25.0%
!! AGTGTCTCATATTTTACTTT+TGG - chr4_3:48272362-48272381 Msa0644410:intron 25.0%
! CTACTCAACCATATAAAAAT+TGG - chr4_3:48272522-48272541 Msa0644410:intron 25.0%
! GTAGAAATTGGAATCAATTA+TGG - chr4_3:48272582-48272601 Msa0644410:intron 25.0%
! AAATTGGAATCAATTATGGT+AGG - chr4_3:48272586-48272605 Msa0644410:intron 25.0%
! AATTGGAATCAATTATGGTA+GGG - chr4_3:48272587-48272606 Msa0644410:intron 25.0%
!! TTTCACTGGAAAGAATTTTA+GGG - chr4_3:48272989-48273008 Msa0644410:intron 25.0%
! TAAAAATACAAATTAGCTGC+GGG + chr4_3:48273333-48273352 None:intergenic 25.0%
! GTAAAAATACAAATTAGCTG+CGG + chr4_3:48273334-48273353 None:intergenic 25.0%
!!! GTATTTTTACAGAATGATGA+TGG - chr4_3:48273344-48273363 Msa0644410:five_prime_UTR 25.0%
! TAATCAAAGTGATAAGCAAA+TGG + chr4_3:48273392-48273411 None:intergenic 25.0%
!!! TGTTCTTAAGTTGATTTTAG+AGG - chr4_3:48273438-48273457 Msa0644410:five_prime_UTR 25.0%
!! AAAGCAATGTAGAGCATTTT+GGG + chr4_3:48270393-48270412 None:intergenic 30.0%
AGAAAATATGAGGGCAAAAA+GGG + chr4_3:48270557-48270576 None:intergenic 30.0%
GACATAATCTCGATGTATTA+GGG + chr4_3:48270645-48270664 None:intergenic 30.0%
TGACATAATCTCGATGTATT+AGG + chr4_3:48270646-48270665 None:intergenic 30.0%
AATTTGTACAGTCAAGGTTA+CGG - chr4_3:48270810-48270829 Msa0644410:CDS 30.0%
GTAGCAGTAATGAAAATTGA+AGG + chr4_3:48270945-48270964 None:intergenic 30.0%
TCAGCAATCTTAAGAAACAT+AGG + chr4_3:48271053-48271072 None:intergenic 30.0%
AGAAAAAAATGCGCAAAAGA+AGG + chr4_3:48271124-48271143 None:intergenic 30.0%
TCTTAAGTTTGTGATACAAG+TGG - chr4_3:48271356-48271375 Msa0644410:intron 30.0%
!!! AACCACTTTTTGACAACTTT+TGG - chr4_3:48271603-48271622 Msa0644410:intron 30.0%
AAAACAATGGAGAGAGAAAA+AGG + chr4_3:48271675-48271694 None:intergenic 30.0%
GTTAAGAAATTAGTTGTGGT+AGG - chr4_3:48271874-48271893 Msa0644410:intron 30.0%
CAGAAATGAATGAAGTAACT+AGG + chr4_3:48271953-48271972 None:intergenic 30.0%
! CAATTTTTGTACGAAGAACA+AGG + chr4_3:48272147-48272166 None:intergenic 30.0%
!!! CAATTTCTACTTTTTCCGTA+CGG + chr4_3:48272572-48272591 None:intergenic 30.0%
! CTTTCACTGGAAAGAATTTT+AGG - chr4_3:48272988-48273007 Msa0644410:intron 30.0%
!! TTTTTAATGTTGGTTGAGGA+AGG - chr4_3:48273053-48273072 Msa0644410:intron 30.0%
!!! GTTTTTTGACTTGATGCTTT+TGG - chr4_3:48273104-48273123 Msa0644410:intron 30.0%
ATGACAAGTTAATTGTGACT+AGG - chr4_3:48273158-48273177 Msa0644410:intron 30.0%
! TGATTTGTCTTGGTTATTGA+TGG - chr4_3:48273184-48273203 Msa0644410:CDS 30.0%
AATTTGTATGCTACTAGAGA+AGG - chr4_3:48273262-48273281 Msa0644410:CDS 30.0%
!!! TTTTTACAGAATGATGATGG+TGG - chr4_3:48273347-48273366 Msa0644410:five_prime_UTR 30.0%
CTTTGATTAAGTGTTTGTGT+TGG - chr4_3:48273403-48273422 Msa0644410:five_prime_UTR 30.0%
!! TGCATTGTAGGGGTTATTTT+TGG + chr4_3:48270205-48270224 None:intergenic 35.0%
GTTTACAACTTGCATTGTAG+GGG + chr4_3:48270215-48270234 None:intergenic 35.0%
GGTTTACAACTTGCATTGTA+GGG + chr4_3:48270216-48270235 None:intergenic 35.0%
TGGTTTACAACTTGCATTGT+AGG + chr4_3:48270217-48270236 None:intergenic 35.0%
!! GAAAGCAATGTAGAGCATTT+TGG + chr4_3:48270394-48270413 None:intergenic 35.0%
ATTGTTGAAGCTAGAATTCC+AGG - chr4_3:48270435-48270454 Msa0644410:three_prime_UTR 35.0%
!! GGTAATTTGTTACATACCCA+TGG + chr4_3:48270529-48270548 None:intergenic 35.0%
CAGAAAATATGAGGGCAAAA+AGG + chr4_3:48270558-48270577 None:intergenic 35.0%
! CTTTTTGCCCTCATATTTTC+TGG - chr4_3:48270556-48270575 Msa0644410:three_prime_UTR 35.0%
CCTCAATCCAGAAAATATGA+GGG + chr4_3:48270566-48270585 None:intergenic 35.0%
! CCTCATATTTTCTGGATTGA+GGG - chr4_3:48270564-48270583 Msa0644410:three_prime_UTR 35.0%
TCACCGTAAATACAAACATG+TGG - chr4_3:48270669-48270688 Msa0644410:exon 35.0%
!!! TTTGTGTTGGTGTTTTTAGG+AGG - chr4_3:48270771-48270790 Msa0644410:CDS 35.0%
TACGGAAATTTGTACAGTCA+AGG - chr4_3:48270804-48270823 Msa0644410:CDS 35.0%
TTCAACAATGGTTTAAGCTG+TGG - chr4_3:48270864-48270883 Msa0644410:CDS 35.0%
TCACTTGCTTGAGCAAAATT+AGG + chr4_3:48270981-48271000 None:intergenic 35.0%
TTTGCTCAAGCAAGTGATAA+TGG - chr4_3:48270984-48271003 Msa0644410:intron 35.0%
TGCATTCTTATATGCAGGTT+CGG + chr4_3:48271173-48271192 None:intergenic 35.0%
AGACATGCATTCTTATATGC+AGG + chr4_3:48271178-48271197 None:intergenic 35.0%
GTCCAAAAGTTGTCAAAAAG+TGG + chr4_3:48271608-48271627 None:intergenic 35.0%
TTCATTAACTGTGATGAGAC+TGG + chr4_3:48271903-48271922 None:intergenic 35.0%
!! TGATGGTGTTTTCGACTTTT+TGG - chr4_3:48271996-48272015 Msa0644410:intron 35.0%
AAATTTAGGTACGTTGACGT+AGG + chr4_3:48272431-48272450 None:intergenic 35.0%
GTGAAGTGATATATACCGTA+CGG - chr4_3:48272554-48272573 Msa0644410:intron 35.0%
CGTACGGAAAAAGTAGAAAT+TGG - chr4_3:48272570-48272589 Msa0644410:intron 35.0%
TTAGCACCAGGTTAAAGTAA+CGG + chr4_3:48272758-48272777 None:intergenic 35.0%
TCCAAGATGTTGAAGATCTA+CGG + chr4_3:48272935-48272954 None:intergenic 35.0%
CAATTTGGTCAAACTTTCAC+TGG - chr4_3:48272975-48272994 Msa0644410:intron 35.0%
! TTGTCTTGGTTATTGATGGT+AGG - chr4_3:48273188-48273207 Msa0644410:CDS 35.0%
! TGTCTTGGTTATTGATGGTA+GGG - chr4_3:48273189-48273208 Msa0644410:CDS 35.0%
GGAGTAGTACTTATGGAGTT+GGG + chr4_3:48270246-48270265 None:intergenic 40.0%
TGGAGTAGTACTTATGGAGT+TGG + chr4_3:48270247-48270266 None:intergenic 40.0%
GGAGAATGGAGTAGTACTTA+TGG + chr4_3:48270253-48270272 None:intergenic 40.0%
ACCTACCCTAGAGATTGATT+GGG + chr4_3:48270307-48270326 None:intergenic 40.0%
AACCTACCCTAGAGATTGAT+TGG + chr4_3:48270308-48270327 None:intergenic 40.0%
AGAATTCCAGGTGTTTACTC+TGG - chr4_3:48270447-48270466 Msa0644410:three_prime_UTR 40.0%
!! GATGCTCATGCTACTTTCTA+TGG - chr4_3:48270483-48270502 Msa0644410:three_prime_UTR 40.0%
ATGAGGGCAAAAAGGGAAAT+GGG + chr4_3:48270550-48270569 None:intergenic 40.0%
TATGAGGGCAAAAAGGGAAA+TGG + chr4_3:48270551-48270570 None:intergenic 40.0%
! CCCTCATATTTTCTGGATTG+AGG - chr4_3:48270563-48270582 Msa0644410:three_prime_UTR 40.0%
CCCTCAATCCAGAAAATATG+AGG + chr4_3:48270567-48270586 None:intergenic 40.0%
!!! TGTTTTTAGGAGGAGCATGT+GGG - chr4_3:48270781-48270800 Msa0644410:CDS 40.0%
! AGCACTGCTTTGTTCAACAA+TGG - chr4_3:48270852-48270871 Msa0644410:CDS 40.0%
AGTGTGCAAATGACAAAGAG+TGG - chr4_3:48270904-48270923 Msa0644410:CDS 40.0%
CTTGCTTGAGCAAAATTAGG+AGG + chr4_3:48270978-48270997 None:intergenic 40.0%
!! AAGCAAGTGATAATGGTGGT+TGG - chr4_3:48270991-48271010 Msa0644410:intron 40.0%
GGCATAGCAAGATCAAAATG+AGG + chr4_3:48271032-48271051 None:intergenic 40.0%
GAAGGAAAGTAACTAACCTG+CGG + chr4_3:48271106-48271125 None:intergenic 40.0%
AGAGAGAAAAAGGAAGAGAG+AGG + chr4_3:48271665-48271684 None:intergenic 40.0%
GTTGCTCTAGTCAAATGTGA+TGG - chr4_3:48271979-48271998 Msa0644410:intron 40.0%
TGTGTGTCTGATTCATGAAG+TGG - chr4_3:48272050-48272069 Msa0644410:intron 40.0%
GTGTGTCTGATTCATGAAGT+GGG - chr4_3:48272051-48272070 Msa0644410:intron 40.0%
TGTGTCTGATTCATGAAGTG+GGG - chr4_3:48272052-48272071 Msa0644410:intron 40.0%
GGAATAAGATTCACCGTGAA+CGG - chr4_3:48272729-48272748 Msa0644410:CDS 40.0%
! AAAGTAACGGAATCCGTTCA+CGG + chr4_3:48272745-48272764 None:intergenic 40.0%
ACCGTAGATCTTCAACATCT+TGG - chr4_3:48272931-48272950 Msa0644410:intron 40.0%
GTTTGACCAAATTGCCAACT+AGG + chr4_3:48272969-48272988 None:intergenic 40.0%
! TGCTTTTGGTGAGAATGAGA+TGG - chr4_3:48273118-48273137 Msa0644410:intron 40.0%
TTTGGTGAGAATGAGATGGA+TGG - chr4_3:48273122-48273141 Msa0644410:intron 40.0%
TTGGTGAGAATGAGATGGAT+GGG - chr4_3:48273123-48273142 Msa0644410:intron 40.0%
!! GACTAGGTGTTGATTTGTCT+TGG - chr4_3:48273174-48273193 Msa0644410:CDS 40.0%
TACTAGAGAAGGAAAGCGAA+AGG - chr4_3:48273273-48273292 Msa0644410:CDS 40.0%
AAGGTAGGAAATGCTGAAAG+TGG - chr4_3:48273292-48273311 Msa0644410:CDS 40.0%
GCTGAAAGTGGCTAAACAAA+TGG - chr4_3:48273304-48273323 Msa0644410:exon 40.0%
! TTGGGAGGTGAGAGTTGATT+GGG + chr4_3:48270289-48270308 None:intergenic 45.0%
! ATTGGGAGGTGAGAGTTGAT+TGG + chr4_3:48270290-48270309 None:intergenic 45.0%
TCACCTCCCAATCAATCTCT+AGG - chr4_3:48270298-48270317 Msa0644410:three_prime_UTR 45.0%
CACCTCCCAATCAATCTCTA+GGG - chr4_3:48270299-48270318 Msa0644410:three_prime_UTR 45.0%
TACCCTAGAGATTGATTGGG+AGG + chr4_3:48270304-48270323 None:intergenic 45.0%
!! TCCCAATCAATCTCTAGGGT+AGG - chr4_3:48270303-48270322 Msa0644410:three_prime_UTR 45.0%
ATTCCAGGTGTTTACTCTGG+TGG - chr4_3:48270450-48270469 Msa0644410:three_prime_UTR 45.0%
GTGTTTACTCTGGTGGTCAA+TGG - chr4_3:48270457-48270476 Msa0644410:three_prime_UTR 45.0%
!! GCTCATGCTACTTTCTATGG+CGG - chr4_3:48270486-48270505 Msa0644410:three_prime_UTR 45.0%
!!! GTGTTTTTAGGAGGAGCATG+TGG - chr4_3:48270780-48270799 Msa0644410:CDS 45.0%
!! GACAAAGAGTGGTGTCATTC+TGG - chr4_3:48270915-48270934 Msa0644410:CDS 45.0%
!! GCTCAAGCAAGTGATAATGG+TGG - chr4_3:48270987-48271006 Msa0644410:intron 45.0%
GATCAAAATGAGGACGAGGA+GGG + chr4_3:48271022-48271041 None:intergenic 45.0%
AGATCAAAATGAGGACGAGG+AGG + chr4_3:48271023-48271042 None:intergenic 45.0%
GCAAGATCAAAATGAGGACG+AGG + chr4_3:48271026-48271045 None:intergenic 45.0%
! AAGATTGCTGAGTATCGTGC+TGG - chr4_3:48271062-48271081 Msa0644410:intron 45.0%
!! GAAGTGGGGTAGTGTTACTT+CGG - chr4_3:48272066-48272085 Msa0644410:intron 45.0%
!! AAGTGGGGTAGTGTTACTTC+GGG - chr4_3:48272067-48272086 Msa0644410:intron 45.0%
!! GGTAGTGTTACTTCGGGTAA+AGG - chr4_3:48272073-48272092 Msa0644410:intron 45.0%
! CGGATTCCGTTACTTTAACC+TGG - chr4_3:48272749-48272768 Msa0644410:CDS 45.0%
CTACGTTGCTAATTAGCACC+AGG + chr4_3:48272770-48272789 None:intergenic 45.0%
GTGCTAATTAGCAACGTAGC+AGG - chr4_3:48272771-48272790 Msa0644410:CDS 45.0%
!! CAATCCAACGCGGTTTTAGT+GGG - chr4_3:48272876-48272895 Msa0644410:CDS 45.0%
AAACACGAAAGGACAAAGCC+TGG + chr4_3:48272902-48272921 None:intergenic 45.0%
GTCACTGCTTGAAACACGAA+AGG + chr4_3:48272913-48272932 None:intergenic 45.0%
TGACCAAATTGCCAACTAGG+AGG + chr4_3:48272966-48272985 None:intergenic 45.0%
TGGTGAGAATGAGATGGATG+GGG - chr4_3:48273124-48273143 Msa0644410:intron 45.0%
AGAGAAGGAAAGCGAAAGGT+AGG - chr4_3:48273277-48273296 Msa0644410:CDS 45.0%
!!! TCATTTTTTTTTTTATTTTT+TGG - chr4_3:48271240-48271259 Msa0644410:intron 5.0%
!!! ATTATTTTTAGATTTTATTT+TGG + chr4_3:48271541-48271560 None:intergenic 5.0%
!! TTAAAAAAAAATGAAAATTT+AGG + chr4_3:48272445-48272464 None:intergenic 5.0%
! CTTATGGAGTTGGGAAGTGC+TGG + chr4_3:48270237-48270256 None:intergenic 50.0%
! TGATTGGGCAGTGAGAGTGT+GGG + chr4_3:48270274-48270293 None:intergenic 50.0%
TTGATTGGGCAGTGAGAGTG+TGG + chr4_3:48270275-48270294 None:intergenic 50.0%
TGACCACCAGAGTAAACACC+TGG + chr4_3:48270456-48270475 None:intergenic 50.0%
!! TATGGCGGATCTGATGCTTC+TGG - chr4_3:48270501-48270520 Msa0644410:three_prime_UTR 50.0%
ATCTGATGCTTCTGGCACCA+TGG - chr4_3:48270509-48270528 Msa0644410:three_prime_UTR 50.0%
TCTGATGCTTCTGGCACCAT+GGG - chr4_3:48270510-48270529 Msa0644410:three_prime_UTR 50.0%
! TTAGGAGGAGCATGTGGGTA+CGG - chr4_3:48270786-48270805 Msa0644410:CDS 50.0%
CTAACCTGCGGTAAGCAACA+GGG + chr4_3:48271094-48271113 None:intergenic 50.0%
ACTAACCTGCGGTAAGCAAC+AGG + chr4_3:48271095-48271114 None:intergenic 50.0%
TCCAATGAGCTTTGCTCACG+AGG - chr4_3:48271200-48271219 Msa0644410:intron 50.0%
TCCTCGTGAGCAAAGCTCAT+TGG + chr4_3:48271204-48271223 None:intergenic 50.0%
ATTCCACCACGCTTTCTGCA+TGG + chr4_3:48272714-48272733 None:intergenic 50.0%
ATTAGCAACGTAGCAGGTGC+TGG - chr4_3:48272777-48272796 Msa0644410:CDS 50.0%
TCAGAACTGGCAATCCAACG+CGG - chr4_3:48272866-48272885 Msa0644410:CDS 50.0%
!! GCAATCCAACGCGGTTTTAG+TGG - chr4_3:48272875-48272894 Msa0644410:CDS 50.0%
GGAACATTGCTCCTCCTAGT+TGG - chr4_3:48272952-48272971 Msa0644410:intron 50.0%
GCTCCTCCTAGTTGGCAATT+TGG - chr4_3:48272960-48272979 Msa0644410:intron 50.0%
! GCAGTGAGAGTGTGGGAGAA+TGG + chr4_3:48270267-48270286 None:intergenic 55.0%
! TTGTCCCTGTTGCTTACCGC+AGG - chr4_3:48271087-48271106 Msa0644410:intron 55.0%
! GGTTCGGGTTCCTTTCACGT+AGG + chr4_3:48272817-48272836 None:intergenic 55.0%
TGAAAGGAACCCGAACCGAG+TGG - chr4_3:48272820-48272839 Msa0644410:CDS 55.0%
TCAGTGGCATCCACTCGGTT+CGG + chr4_3:48272833-48272852 None:intergenic 55.0%
GATGCCACTGAGCCGAAACT+GGG - chr4_3:48272842-48272861 Msa0644410:CDS 55.0%
ATGCCACTGAGCCGAAACTG+GGG - chr4_3:48272843-48272862 Msa0644410:CDS 55.0%
! GCCAGTTCTGACCCCAGTTT+CGG + chr4_3:48272857-48272876 None:intergenic 55.0%
! AGGGTGCCATGCAGAAAGCG+TGG - chr4_3:48272705-48272724 Msa0644410:CDS 60.0%
! GTGCCATGCAGAAAGCGTGG+TGG - chr4_3:48272708-48272727 Msa0644410:CDS 60.0%
ATCGTGCGCGCCTACGTGAA+AGG - chr4_3:48272804-48272823 Msa0644410:CDS 60.0%
CAGTGGCATCCACTCGGTTC+GGG + chr4_3:48272832-48272851 None:intergenic 60.0%
TCGGCTCAGTGGCATCCACT+CGG + chr4_3:48272838-48272857 None:intergenic 60.0%
GGATGCCACTGAGCCGAAAC+TGG - chr4_3:48272841-48272860 Msa0644410:CDS 60.0%
TGACCCCAGTTTCGGCTCAG+TGG + chr4_3:48272849-48272868 None:intergenic 60.0%
GCCGAAACTGGGGTCAGAAC+TGG - chr4_3:48272853-48272872 Msa0644410:CDS 60.0%
CTGGCCCACTAAAACCGCGT+TGG + chr4_3:48272883-48272902 None:intergenic 60.0%
!! CAACGCGGTTTTAGTGGGCC+AGG - chr4_3:48272881-48272900 Msa0644410:CDS 60.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 48270196 48273508 48270196 ID=Msa0644410;Name=Msa0644410
chr4_3 mRNA 48270196 48273508 48270196 ID=Msa0644410-mRNA-1;Parent=Msa0644410;Name=Msa0644410-mRNA-1;_AED=0.00;_eAED=0.00;_QI=188|1|1|1|1|1|3|492|258
chr4_3 exon 48270196 48270997 48270196 ID=Msa0644410-mRNA-1:exon:11451;Parent=Msa0644410-mRNA-1
chr4_3 exon 48272596 48272914 48272596 ID=Msa0644410-mRNA-1:exon:11450;Parent=Msa0644410-mRNA-1
chr4_3 exon 48273173 48273508 48273173 ID=Msa0644410-mRNA-1:exon:11449;Parent=Msa0644410-mRNA-1
chr4_3 five_prime_UTR 48273321 48273508 48273321 ID=Msa0644410-mRNA-1:five_prime_utr;Parent=Msa0644410-mRNA-1
chr4_3 CDS 48273173 48273320 48273173 ID=Msa0644410-mRNA-1:cds;Parent=Msa0644410-mRNA-1
chr4_3 CDS 48272596 48272914 48272596 ID=Msa0644410-mRNA-1:cds;Parent=Msa0644410-mRNA-1
chr4_3 CDS 48270688 48270997 48270688 ID=Msa0644410-mRNA-1:cds;Parent=Msa0644410-mRNA-1
chr4_3 three_prime_UTR 48270196 48270687 48270196 ID=Msa0644410-mRNA-1:three_prime_utr;Parent=Msa0644410-mRNA-1
Gene Sequence

>Msa0644410

ATGGTGCCCAAAATGCTCTACATTGCTTTCATAATTATCACTTCAATGTACATTGTTGAAGCTAGAATTCCAGGTGTTTACTCTGGTGGTCAATGGCAAGATGCTCATGCTACTTTCTATGGCGGATCTGATGCTTCTGGCACCATGGGAGGAGCATGTGGGTACGGAAATTTGTACAGTCAAGGTTACGGAGTGAACACAGCAGCATTAAGCACTGCTTTGTTCAACAATGGTTTAAGCTGTGGTGCTTGTTTTGAGATAAAGTGTGCAAATGACAAAGAGTGGTGTCATTCTGGAAGTCCTTCAATTTTCATTACTGCTACTAACTTTTGTCCTCCTAATTTTGCTCAAGCAAGTGATAATGGTGGTTGGTGTAACCCTCCTCGTCCTCATTTTGATCTTGCTATGCCTATGTTTCTTAAGATTGCTGAGTATCGTGCTGGTATTGTCCCTGTTGCTTACCGCAGGGTGCCATGCAGAAAGCGTGGTGGAATAAGATTCACCGTGAACGGATTCCGTTACTTTAACCTGGTGCTAATTAGCAACGTAGCAGGTGCTGGTGATATCGTGCGCGCCTACGTGAAAGGAACCCGAACCGAGTGGATGCCACTGAGCCGAAACTGGGGTCAGAACTGGCAATCCAACGCGGTTTTAGTGGGCCAGGCTTTGTCCTTTCGTGTTTCAAGCAGTGACCGTAGATCTTCAACATCTTGGAACATTGCTCCTCCTAGTTGGCAATTTGGTCAAACTTTCACTGGAAAGAATTTTAGGGTTTAA

Protein sequence

>Msa0644410

MVPKMLYIAFIIITSMYIVEARIPGVYSGGQWQDAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANDKEWCHSGSPSIFITATNFCPPNFAQASDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKRGGIRFTVNGFRYFNLVLISNVAGAGDIVRAYVKGTRTEWMPLSRNWGQNWQSNAVLVGQALSFRVSSSDRRSSTSWNIAPPSWQFGQTFTGKNFRV*