Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0726910 | XP_003614096.1 | 97.500 | 400 | 7 | 1 | 1 | 400 | 1 | 397 | 0.0 | 793 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0726910 | sp|Q9ZQ89|UPS2_ARATH | 77.916 | 403 | 81 | 3 | 1 | 400 | 1 | 398 | 0.0 | 619 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0726910 | G7JY00 | 97.500 | 400 | 7 | 1 | 1 | 400 | 1 | 397 | 0.0 | 793 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0726910 | Msa0767370 | 0.815348 | 9.679701e-52 | -8.615850e-47 |
| Msa0726910 | Msa0847010 | 0.815085 | 1.107705e-51 | -8.615850e-47 |
| Msa0726910 | Msa1062040 | 0.801239 | 9.890212e-49 | -8.615850e-47 |
| Msa0726910 | Msa1107200 | 0.810693 | 1.015160e-50 | -8.615850e-47 |
| Msa0726910 | Msa1430130 | 0.804114 | 2.523804e-49 | -8.615850e-47 |
| Msa0726910 | Msa1460750 | 0.803834 | 2.885730e-49 | -8.615850e-47 |
| Msa0388730 | Msa0726910 | 0.802508 | 5.427621e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0726910 | MtrunA17_Chr5g0419251 | 97.500 | 400 | 7 | 1 | 1 | 400 | 1 | 397 | 0.0 | 793 |
| Msa0726910 | MtrunA17_Chr5g0419581 | 88.337 | 403 | 42 | 3 | 1 | 400 | 1 | 401 | 0.0 | 665 |
| Msa0726910 | MtrunA17_Chr5g0419571 | 82.469 | 405 | 62 | 3 | 1 | 400 | 27 | 427 | 0.0 | 647 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0726910 | AT2G03530.2 | 77.916 | 403 | 81 | 3 | 1 | 400 | 1 | 398 | 0.0 | 619 |
| Msa0726910 | AT2G03530.1 | 77.916 | 403 | 81 | 3 | 1 | 400 | 1 | 398 | 0.0 | 619 |
| Msa0726910 | AT2G03590.2 | 76.750 | 400 | 83 | 2 | 1 | 400 | 1 | 390 | 0.0 | 607 |
| Msa0726910 | AT2G03590.1 | 76.750 | 400 | 83 | 2 | 1 | 400 | 1 | 390 | 0.0 | 607 |
| Msa0726910 | AT2G03530.4 | 77.690 | 381 | 77 | 3 | 1 | 378 | 1 | 376 | 0.0 | 585 |
| Msa0726910 | AT2G03520.1 | 68.889 | 405 | 117 | 3 | 1 | 400 | 1 | 401 | 0.0 | 542 |
| Msa0726910 | AT1G26440.3 | 67.726 | 409 | 115 | 4 | 1 | 400 | 9 | 409 | 0.0 | 531 |
| Msa0726910 | AT1G26440.2 | 67.726 | 409 | 115 | 4 | 1 | 400 | 9 | 409 | 0.0 | 531 |
| Msa0726910 | AT2G03530.5 | 77.358 | 318 | 67 | 2 | 83 | 400 | 1 | 313 | 2.79e-169 | 476 |
| Msa0726910 | AT2G03530.3 | 77.358 | 318 | 67 | 2 | 83 | 400 | 1 | 313 | 2.79e-169 | 476 |
| Msa0726910 | AT1G26440.1 | 61.520 | 408 | 106 | 5 | 1 | 400 | 9 | 373 | 4.76e-164 | 465 |
| Msa0726910 | AT1G26440.6 | 61.369 | 409 | 106 | 5 | 1 | 400 | 9 | 374 | 7.00e-164 | 465 |
| Msa0726910 | AT1G26440.7 | 67.781 | 329 | 94 | 2 | 76 | 400 | 16 | 336 | 1.03e-153 | 437 |
| Msa0726910 | AT1G26440.8 | 67.781 | 329 | 94 | 2 | 76 | 400 | 16 | 336 | 1.03e-153 | 437 |
| Msa0726910 | AT2G03600.4 | 63.450 | 342 | 102 | 5 | 1 | 336 | 1 | 325 | 3.69e-148 | 424 |
| Msa0726910 | AT2G03600.5 | 62.130 | 338 | 105 | 4 | 1 | 336 | 1 | 317 | 4.02e-143 | 410 |
| Msa0726910 | AT1G26440.4 | 55.941 | 404 | 109 | 5 | 1 | 400 | 9 | 347 | 1.53e-136 | 394 |
| Msa0726910 | AT2G03600.6 | 70.000 | 270 | 67 | 2 | 1 | 270 | 1 | 256 | 1.84e-133 | 383 |
| Msa0726910 | AT2G03600.1 | 70.000 | 270 | 67 | 2 | 1 | 270 | 1 | 256 | 1.84e-133 | 383 |
| Msa0726910 | AT1G26440.5 | 59.878 | 329 | 85 | 3 | 76 | 400 | 16 | 301 | 2.00e-128 | 372 |
| Msa0726910 | AT2G03600.2 | 64.828 | 290 | 65 | 3 | 1 | 267 | 1 | 276 | 8.73e-128 | 369 |
| Msa0726910 | AT2G03600.3 | 66.489 | 188 | 49 | 2 | 83 | 270 | 1 | 174 | 1.17e-79 | 243 |
Find 95 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCACTTGTGAGCACTTTC+TGG | 0.038144 | 5_1:+28592293 | Msa0726910:CDS |
| ATCATCATTGAAGGCTTATT+TGG | 0.095179 | 5_1:+28591993 | Msa0726910:CDS |
| TGGGAATGGCCTTCAATTTA+TGG | 0.121139 | 5_1:+28592068 | Msa0726910:CDS |
| TAAGCCTTCAATGATGATTT+TGG | 0.158866 | 5_1:-28591988 | None:intergenic |
| GCTGGTTTCCTTGTTGTTCT+TGG | 0.192853 | 5_1:+28588501 | Msa0726910:CDS |
| AGGCAGTATAAACACTTAAA+TGG | 0.211882 | 5_1:-28591885 | None:intergenic |
| GCTGGTCTACTTTGTGGATT+TGG | 0.221208 | 5_1:+28592048 | Msa0726910:CDS |
| CTGGTTTCCTTGTTGTTCTT+GGG | 0.222511 | 5_1:+28588502 | Msa0726910:CDS |
| TATGAAGAAAGTAAACTTTA+TGG | 0.247713 | 5_1:+28592497 | Msa0726910:three_prime_UTR |
| GGAATATCGACTTGCCTTAA+TGG | 0.249356 | 5_1:-28591482 | None:intergenic |
| AAGATTTATATAGGAGGATT+TGG | 0.252370 | 5_1:+28592554 | Msa0726910:three_prime_UTR |
| GCTTTCACCTTTGGTCAAAT+TGG | 0.256882 | 5_1:+28588628 | Msa0726910:CDS |
| GTTATCATTGCTTTCACCTT+TGG | 0.272469 | 5_1:+28588619 | Msa0726910:CDS |
| GCAGTGCTCATGGCATCATC+TGG | 0.290022 | 5_1:+28592406 | Msa0726910:CDS |
| GCCAGCTGTGATGACTTTAT+TGG | 0.290683 | 5_1:+28588531 | Msa0726910:CDS |
| TTAGCTATAACTTTCTTTGC+AGG | 0.305190 | 5_1:+28591784 | Msa0726910:CDS |
| CTGGTCTACTTTGTGGATTT+GGG | 0.310127 | 5_1:+28592049 | Msa0726910:CDS |
| TGAAGGCTTATTTGGGAGAT+TGG | 0.323288 | 5_1:+28592001 | Msa0726910:CDS |
| GGCAGTATAAACACTTAAAT+GGG | 0.325531 | 5_1:-28591884 | None:intergenic |
| TCCACTTGTGAGCACTTTCT+GGG | 0.325696 | 5_1:+28592294 | Msa0726910:CDS |
| TCAAGTATAACTGTTGTTAT+AGG | 0.331374 | 5_1:+28590738 | Msa0726910:CDS |
| CCTTGTTGTTCTTGGGGACA+TGG | 0.348148 | 5_1:+28588509 | Msa0726910:CDS |
| GGGAATGGCCTTCAATTTAT+GGG | 0.348344 | 5_1:+28592069 | Msa0726910:CDS |
| TATTGATTCAAGATTTATAT+AGG | 0.348944 | 5_1:+28592545 | Msa0726910:three_prime_UTR |
| CACCTTTCAAGTTGAATGAA+TGG | 0.357333 | 5_1:-28592461 | None:intergenic |
| TTCTATTTGCAATGGCTGGT+GGG | 0.362399 | 5_1:+28590637 | Msa0726910:CDS |
| AAACACTGCAGTTCCTGCTT+TGG | 0.374306 | 5_1:-28591434 | None:intergenic |
| CAGTGGAACACTTTAGATAA+AGG | 0.378993 | 5_1:+28591856 | Msa0726910:CDS |
| GGAAACCAGCATGCATACTA+TGG | 0.384971 | 5_1:-28588488 | None:intergenic |
| GATTCAAAGGATTTAGAGAA+TGG | 0.387178 | 5_1:+28591397 | Msa0726910:CDS |
| AGTGGAACACTTTAGATAAA+GGG | 0.388576 | 5_1:+28591857 | Msa0726910:CDS |
| TCATCATTGAAGGCTTATTT+GGG | 0.389547 | 5_1:+28591994 | Msa0726910:CDS |
| TTGTTGGCTGGTCTACTTTG+TGG | 0.391876 | 5_1:+28592042 | Msa0726910:CDS |
| GAAAGTTGAGACAAGAAGTT+AGG | 0.396418 | 5_1:-28588661 | None:intergenic |
| AGAGGTTGGGCATTGTTGGC+TGG | 0.396797 | 5_1:+28592030 | Msa0726910:CDS |
| CTTCTTGTCTCAACTTTCTC+AGG | 0.400214 | 5_1:+28588666 | Msa0726910:CDS |
| TGGTAGAGGTTGGGCATTGT+TGG | 0.400672 | 5_1:+28592026 | Msa0726910:CDS |
| AGTTCAAGACAGGGTGATAA+AGG | 0.402264 | 5_1:-28591963 | None:intergenic |
| TCTGTTCTATTTGCAATGGC+TGG | 0.404500 | 5_1:+28590633 | Msa0726910:CDS |
| AAAATGATCATGCAACATAA+AGG | 0.407531 | 5_1:+28592435 | Msa0726910:exon |
| TTAAACCATTTGCAGGTGTT+TGG | 0.421342 | 5_1:+28591742 | Msa0726910:intron |
| CTACTTTGTGGATTTGGGAA+TGG | 0.422579 | 5_1:+28592054 | Msa0726910:CDS |
| TTGGGAGATTGGAATGGTAG+AGG | 0.433035 | 5_1:+28592012 | Msa0726910:CDS |
| TTTGGAAAGAGCACTTTCAT+TGG | 0.435170 | 5_1:+28591760 | Msa0726910:CDS |
| CTTACCAAAATCATCATTGA+AGG | 0.436598 | 5_1:+28591984 | Msa0726910:CDS |
| TTTGTCCACTCAGTATGCTT+GGG | 0.439898 | 5_1:+28590680 | Msa0726910:CDS |
| ATTTGTCCACTCAGTATGCT+TGG | 0.448183 | 5_1:+28590679 | Msa0726910:CDS |
| GGTGGGGTTGTCCTTAGCAT+TGG | 0.454459 | 5_1:+28590654 | Msa0726910:CDS |
| CTACACCATCACTAATCTCT+TGG | 0.456636 | 5_1:+28588591 | Msa0726910:CDS |
| AGTGATGGTGTAGTCAAGAT+AGG | 0.456695 | 5_1:-28588581 | None:intergenic |
| AGGAGAACATATACATTGCT+TGG | 0.456969 | 5_1:+28592352 | Msa0726910:CDS |
| GCCTTCTGTTCTATTTGCAA+TGG | 0.461913 | 5_1:+28590629 | Msa0726910:CDS |
| GTTCTATTTGCAATGGCTGG+TGG | 0.473832 | 5_1:+28590636 | Msa0726910:CDS |
| AATGTATATGGTGGAGAGCA+AGG | 0.477899 | 5_1:+28588459 | None:intergenic |
| GAAGGTGATGTTTAGAATGA+TGG | 0.478524 | 5_1:-28591941 | None:intergenic |
| GAGATTGGAATGGTAGAGGT+TGG | 0.480321 | 5_1:+28592016 | Msa0726910:CDS |
| AACCATTCATTCAACTTGAA+AGG | 0.493918 | 5_1:+28592459 | Msa0726910:three_prime_UTR |
| TGCAGCTGTCGCAGTGCTCA+TGG | 0.495704 | 5_1:+28592396 | Msa0726910:CDS |
| AGATTGGAATGGTAGAGGTT+GGG | 0.498339 | 5_1:+28592017 | Msa0726910:CDS |
| TCCAATAAAGTCATCACAGC+TGG | 0.498538 | 5_1:-28588532 | None:intergenic |
| TGGTTTCCTTGTTGTTCTTG+GGG | 0.501836 | 5_1:+28588503 | Msa0726910:CDS |
| CTTGTCCACCCATAAATTGA+AGG | 0.504503 | 5_1:-28592077 | None:intergenic |
| AATATAAACAGATGATTCAA+AGG | 0.505153 | 5_1:+28591384 | Msa0726910:intron |
| TTTGTTGCTAAATTGAATGC+TGG | 0.505932 | 5_1:-28591829 | None:intergenic |
| TTTATGGGTGGACAAGCTGC+TGG | 0.509933 | 5_1:+28592084 | Msa0726910:CDS |
| TCTATTTGCAATGGCTGGTG+GGG | 0.519530 | 5_1:+28590638 | Msa0726910:CDS |
| GGAGAACATATACATTGCTT+GGG | 0.522179 | 5_1:+28592353 | Msa0726910:CDS |
| GCTTATTTGGGAGATTGGAA+TGG | 0.541985 | 5_1:+28592006 | Msa0726910:CDS |
| ATCTAATACTGCTGATAACA+AGG | 0.543347 | 5_1:+28590977 | Msa0726910:CDS |
| CCCCAGAAAGTGCTCACAAG+TGG | 0.548827 | 5_1:-28592295 | None:intergenic |
| CTTTATCTAAAGTGTTCCAC+TGG | 0.550283 | 5_1:-28591855 | None:intergenic |
| CAGTGCTCATGGCATCATCT+GGG | 0.551445 | 5_1:+28592407 | Msa0726910:CDS |
| GCCATTGCAAATAGAACAGA+AGG | 0.555972 | 5_1:-28590630 | None:intergenic |
| TGATTCAAGATTTATATAGG+AGG | 0.564411 | 5_1:+28592548 | Msa0726910:three_prime_UTR |
| AGTGCAAACAAAGCCAAAGC+AGG | 0.564487 | 5_1:+28591421 | Msa0726910:CDS |
| CTGTGATGACTTTATTGGAA+AGG | 0.567287 | 5_1:+28588536 | Msa0726910:CDS |
| CCACTTGTGAGCACTTTCTG+GGG | 0.568469 | 5_1:+28592295 | Msa0726910:CDS |
| TGGACAAATTTCCAATGCTA+AGG | 0.572809 | 5_1:-28590665 | None:intergenic |
| ATGTATATGGTGGAGAGCAA+GGG | 0.579654 | 5_1:+28588460 | Msa0726910:CDS |
| ATCAGTGCCAATTTGACCAA+AGG | 0.592220 | 5_1:-28588635 | None:intergenic |
| GTGGAACACTTTAGATAAAG+GGG | 0.598850 | 5_1:+28591858 | Msa0726910:CDS |
| CAAGACAGGGTGATAAAGGA+AGG | 0.599842 | 5_1:-28591959 | None:intergenic |
| AGGTGCCATAGTATGCATGC+TGG | 0.613318 | 5_1:+28588483 | Msa0726910:CDS |
| GCGAGTATAGAAAATCATCA+AGG | 0.624685 | 5_1:+28592332 | Msa0726910:CDS |
| AGCAGCCAAGAGATTAGTGA+TGG | 0.628687 | 5_1:-28588596 | None:intergenic |
| AATGGCCTTCAATTTATGGG+TGG | 0.631921 | 5_1:+28592072 | Msa0726910:CDS |
| TGATAACAAGGCTAAGCTCA+AGG | 0.632197 | 5_1:+28590989 | Msa0726910:CDS |
| ATGACTTTATTGGAAAGGAG+AGG | 0.632269 | 5_1:+28588541 | Msa0726910:CDS |
| CCATGTCCCCAAGAACAACA+AGG | 0.634994 | 5_1:-28588509 | None:intergenic |
| ATTTAGCAACAAATGACCAG+TGG | 0.636828 | 5_1:+28591839 | Msa0726910:CDS |
| TATATGGTGGAGAGCAAGGG+AGG | 0.646098 | 5_1:+28588463 | Msa0726910:CDS |
| ACTTTGAATGAAGAAAGTAA+AGG | 0.657392 | 5_1:+28591303 | Msa0726910:CDS |
| TAGTCAAGATAGGTGTGCTG+AGG | 0.663042 | 5_1:-28588571 | None:intergenic |
| GCAGTATAAACACTTAAATG+GGG | 0.664993 | 5_1:-28591883 | None:intergenic |
| AAAAGCCCAAGCATACTGAG+TGG | 0.720310 | 5_1:-28590685 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATACAAACATAAATAAT+AGG | + | chr5_1:28588784-28588803 | Msa0726910:intron | 10.0% |
| !!! | TAAAATATTTTAATACAACT+AGG | - | chr5_1:28589292-28589311 | None:intergenic | 10.0% |
| !! | ATATTAAAAATATTAATGAC+TGG | - | chr5_1:28589449-28589468 | None:intergenic | 10.0% |
| !!! | TTAAGAAAATGTTTATTTTT+AGG | + | chr5_1:28589528-28589547 | Msa0726910:intron | 10.0% |
| !!! | TAAGAAAATGTTTATTTTTA+GGG | + | chr5_1:28589529-28589548 | Msa0726910:intron | 10.0% |
| !!! | CTAATTTTCATTTTTTTATT+GGG | - | chr5_1:28589695-28589714 | None:intergenic | 10.0% |
| !!! | TCTAATTTTCATTTTTTTAT+TGG | - | chr5_1:28589696-28589715 | None:intergenic | 10.0% |
| !! | TATTAAAAAAAATATGCTTT+GGG | - | chr5_1:28590165-28590184 | None:intergenic | 10.0% |
| !! | ATATTAAAAAAAATATGCTT+TGG | - | chr5_1:28590166-28590185 | None:intergenic | 10.0% |
| !!! | TGACAAAAAATTTAAATTTT+AGG | - | chr5_1:28590398-28590417 | None:intergenic | 10.0% |
| !!! | TTTTCTATGTTAATTCTAAA+TGG | + | chr5_1:28588706-28588725 | Msa0726910:intron | 15.0% |
| !!! | ATTTTTTGGCTTAATAAATT+TGG | - | chr5_1:28588993-28589012 | None:intergenic | 15.0% |
| !!! | ATATTTTAAACGATAAAAAG+AGG | + | chr5_1:28589304-28589323 | Msa0726910:intron | 15.0% |
| !!! | ATTTTGTTCTAAATTACTTT+TGG | + | chr5_1:28591158-28591177 | Msa0726910:intron | 15.0% |
| !! | CATCTGTTTATATTAATAAA+GGG | - | chr5_1:28591378-28591397 | None:intergenic | 15.0% |
| !! | TCATCTGTTTATATTAATAA+AGG | - | chr5_1:28591379-28591398 | None:intergenic | 15.0% |
| !!! | TAGTTTTAAGTTTTAAATTG+TGG | - | chr5_1:28591679-28591698 | None:intergenic | 15.0% |
| !!! | TATTGATTCAAGATTTATAT+AGG | + | chr5_1:28592545-28592564 | Msa0726910:three_prime_UTR | 15.0% |
| !!! | TTGATGATATTTTTAGTCAT+GGG | + | chr5_1:28588751-28588770 | Msa0726910:intron | 20.0% |
| !! | AAAAAACACAAACTCTTATT+TGG | - | chr5_1:28588962-28588981 | None:intergenic | 20.0% |
| !!! | TATTTCTCTTGTAAGTTTTA+AGG | + | chr5_1:28589466-28589485 | Msa0726910:intron | 20.0% |
| !! | AAAAACAGAAGAAAAAATCT+AGG | + | chr5_1:28589977-28589996 | Msa0726910:intron | 20.0% |
| !!! | CCAAAATTTGAATTTTTTGT+CGG | + | chr5_1:28590293-28590312 | Msa0726910:intron | 20.0% |
| !!! | ATTTTTATTTGTGATTGTCA+GGG | - | chr5_1:28590464-28590483 | None:intergenic | 20.0% |
| !!! | CACAACATTGAATTATTTTT+TGG | + | chr5_1:28590869-28590888 | Msa0726910:CDS | 20.0% |
| !!! | CTAAATTACTTTTGGTTAAT+TGG | + | chr5_1:28591166-28591185 | Msa0726910:intron | 20.0% |
| !! | AAAGTAAAGGTAACAATATT+TGG | + | chr5_1:28591316-28591335 | Msa0726910:intron | 20.0% |
| !! | AATATAAACAGATGATTCAA+AGG | + | chr5_1:28591384-28591403 | Msa0726910:intron | 20.0% |
| !!! | ATGATTGTAGTTTTAAACTT+CGG | - | chr5_1:28591556-28591575 | None:intergenic | 20.0% |
| !! | TAGAAAAATAAAGACAAACA+CGG | + | chr5_1:28591605-28591624 | Msa0726910:intron | 20.0% |
| !! | TATGAAGAAAGTAAACTTTA+TGG | + | chr5_1:28592497-28592516 | Msa0726910:three_prime_UTR | 20.0% |
| ! | TGTTAATTCTAAATGGAAAG+AGG | + | chr5_1:28588713-28588732 | Msa0726910:intron | 25.0% |
| !!! | CTTGATGATATTTTTAGTCA+TGG | + | chr5_1:28588750-28588769 | Msa0726910:intron | 25.0% |
| ! | AATTTGAGCCAAAAAATAGT+TGG | - | chr5_1:28588935-28588954 | None:intergenic | 25.0% |
| !!! | GCTTTCTTTACACAATTTTT+TGG | - | chr5_1:28589007-28589026 | None:intergenic | 25.0% |
| !!! | TCTTATTTGGTTTTTAGGAA+GGG | - | chr5_1:28589129-28589148 | None:intergenic | 25.0% |
| !!! | CAAACTCTTATTTGGTTTTT+AGG | - | chr5_1:28589134-28589153 | None:intergenic | 25.0% |
| ! | TTTGCATTCAAACTCTTATT+TGG | - | chr5_1:28589142-28589161 | None:intergenic | 25.0% |
| ! | TTGAAAAATGCGAAAGAAAT+GGG | - | chr5_1:28589253-28589272 | None:intergenic | 25.0% |
| ! | ACATAATTTAATCGATATGG+TGG | - | chr5_1:28589395-28589414 | None:intergenic | 25.0% |
| ! | GTGACATAATTTAATCGATA+TGG | - | chr5_1:28589398-28589417 | None:intergenic | 25.0% |
| ! | AAGGTTCATACAAATACATT+TGG | + | chr5_1:28589485-28589504 | Msa0726910:intron | 25.0% |
| ! | TTCATACAAATACATTTGGA+CGG | + | chr5_1:28589489-28589508 | Msa0726910:intron | 25.0% |
| ! | ATGAAAAACATTCAACTTGT+AGG | + | chr5_1:28589715-28589734 | Msa0726910:intron | 25.0% |
| !! | AATCTCTCATGCTTTTAATA+AGG | + | chr5_1:28589817-28589836 | Msa0726910:intron | 25.0% |
| ! | TAATAAGGCAAACAATAAGA+CGG | + | chr5_1:28589832-28589851 | Msa0726910:intron | 25.0% |
| ! | AAAAAAATCTGTTGCATTCT+TGG | + | chr5_1:28589923-28589942 | Msa0726910:intron | 25.0% |
| ! | CATAGTTCCTAAAAAATGAT+TGG | - | chr5_1:28590100-28590119 | None:intergenic | 25.0% |
| !! | CCGACAAAAAATTCAAATTT+TGG | - | chr5_1:28590296-28590315 | None:intergenic | 25.0% |
| !!! | ATTCCCTGTTTTAGTTTTTA+AGG | - | chr5_1:28590320-28590339 | None:intergenic | 25.0% |
| !!! | TAGTGCCTTTTTAAGTATTT+TGG | + | chr5_1:28590370-28590389 | Msa0726910:intron | 25.0% |
| !!! | AGTGCCTTTTTAAGTATTTT+GGG | + | chr5_1:28590371-28590390 | Msa0726910:intron | 25.0% |
| ! | AGTCCTTAAAAACTAAAACA+GGG | + | chr5_1:28590417-28590436 | Msa0726910:intron | 25.0% |
| !!! | CATTTTTATTTGTGATTGTC+AGG | - | chr5_1:28590465-28590484 | None:intergenic | 25.0% |
| ! | TCAAGTATAACTGTTGTTAT+AGG | + | chr5_1:28590738-28590757 | Msa0726910:CDS | 25.0% |
| ! | ATAGCTACTACTAATATGAT+TGG | - | chr5_1:28591075-28591094 | None:intergenic | 25.0% |
| !! | AATCATTTCTGATTTTGTCT+TGG | + | chr5_1:28591209-28591228 | Msa0726910:intron | 25.0% |
| !!! | CAAAATCTGTTATTTTTCCA+GGG | + | chr5_1:28591266-28591285 | Msa0726910:intron | 25.0% |
| !!! | AAAATCTGTTATTTTTCCAG+GGG | + | chr5_1:28591267-28591286 | Msa0726910:intron | 25.0% |
| ! | ACTTTGAATGAAGAAAGTAA+AGG | + | chr5_1:28591303-28591322 | Msa0726910:CDS | 25.0% |
| !! | TATTAATAAAGGGCATGAAT+AGG | - | chr5_1:28591368-28591387 | None:intergenic | 25.0% |
| ! | TGAGAAAAAAAGATCCATTA+AGG | + | chr5_1:28591468-28591487 | Msa0726910:CDS | 25.0% |
| ! | AGAGACTGAAAAATAAAAGA+AGG | - | chr5_1:28591908-28591927 | None:intergenic | 25.0% |
| !! | TTTTATTCAGATACTCCATT+TGG | + | chr5_1:28592205-28592224 | Msa0726910:intron | 25.0% |
| !! | TTATGTTGCATGATCATTTT+CGG | - | chr5_1:28592435-28592454 | None:intergenic | 25.0% |
| ! | AAAATGATCATGCAACATAA+AGG | + | chr5_1:28592435-28592454 | Msa0726910:exon | 25.0% |
| !!! | ATGGTCGTTTTAATATTTTG+TGG | + | chr5_1:28592516-28592535 | Msa0726910:three_prime_UTR | 25.0% |
| ! | TGATTCAAGATTTATATAGG+AGG | + | chr5_1:28592548-28592567 | Msa0726910:three_prime_UTR | 25.0% |
| ! | AAGATTTATATAGGAGGATT+TGG | + | chr5_1:28592554-28592573 | Msa0726910:three_prime_UTR | 25.0% |
| !!! | TCCTTCATCCAACTATTTTT+TGG | + | chr5_1:28588924-28588943 | Msa0726910:intron | 30.0% |
| ACGGAAAAACGATAAATACA+AGG | + | chr5_1:28589037-28589056 | Msa0726910:intron | 30.0% | |
| TACAAGGTACAGTATATATG+CGG | + | chr5_1:28589053-28589072 | Msa0726910:intron | 30.0% | |
| !!! | CTCTTATTTGGTTTTTAGGA+AGG | - | chr5_1:28589130-28589149 | None:intergenic | 30.0% |
| AACACAGAGAAAAAATAAGC+TGG | + | chr5_1:28589167-28589186 | Msa0726910:intron | 30.0% | |
| ! | TTTTTCCACTTTCTTCTTTG+TGG | + | chr5_1:28589210-28589229 | Msa0726910:intron | 30.0% |
| ! | TTTTCCACTTTCTTCTTTGT+GGG | + | chr5_1:28589211-28589230 | Msa0726910:intron | 30.0% |
| GTTGAAAAATGCGAAAGAAA+TGG | - | chr5_1:28589254-28589273 | None:intergenic | 30.0% | |
| AAAAACATTCAACTTGTAGG+AGG | + | chr5_1:28589718-28589737 | Msa0726910:intron | 30.0% | |
| AATAAGGCAAACAATAAGAC+GGG | + | chr5_1:28589833-28589852 | Msa0726910:intron | 30.0% | |
| !!! | TCACTCTCCAATCATTTTTT+AGG | + | chr5_1:28590090-28590109 | Msa0726910:intron | 30.0% |
| TTCCCTTCTTCTATCTATAT+GGG | + | chr5_1:28590138-28590157 | Msa0726910:intron | 30.0% | |
| GGTCCTTAAAAACTAAAACA+GGG | + | chr5_1:28590314-28590333 | Msa0726910:intron | 30.0% | |
| !!! | GTGCCTTTTTAAGTATTTTG+GGG | + | chr5_1:28590372-28590391 | Msa0726910:intron | 30.0% |
| CAGTCCTTAAAAACTAAAAC+AGG | + | chr5_1:28590416-28590435 | Msa0726910:intron | 30.0% | |
| !! | GGCCAATAAATTTGTTAAGA+CGG | + | chr5_1:28590438-28590457 | Msa0726910:intron | 30.0% |
| AATTCAGCAGAATTCAATAC+TGG | - | chr5_1:28590826-28590845 | None:intergenic | 30.0% | |
| !!! | TTTTTGGTTGCAGTTTGTTT+AGG | + | chr5_1:28590939-28590958 | Msa0726910:CDS | 30.0% |
| ATCTAATACTGCTGATAACA+AGG | + | chr5_1:28590977-28590996 | Msa0726910:CDS | 30.0% | |
| ! | CCTGGAAAAATAACAGATTT+TGG | - | chr5_1:28591268-28591287 | None:intergenic | 30.0% |
| !!! | CCAAAATCTGTTATTTTTCC+AGG | + | chr5_1:28591265-28591284 | Msa0726910:intron | 30.0% |
| !!! | AAATCTGTTATTTTTCCAGG+GGG | + | chr5_1:28591268-28591287 | Msa0726910:intron | 30.0% |
| GATTCAAAGGATTTAGAGAA+TGG | + | chr5_1:28591397-28591416 | Msa0726910:CDS | 30.0% | |
| TTAGCTATAACTTTCTTTGC+AGG | + | chr5_1:28591784-28591803 | Msa0726910:CDS | 30.0% | |
| TTTGTTGCTAAATTGAATGC+TGG | - | chr5_1:28591832-28591851 | None:intergenic | 30.0% | |
| AGTGGAACACTTTAGATAAA+GGG | + | chr5_1:28591857-28591876 | Msa0726910:CDS | 30.0% | |
| GCAGTATAAACACTTAAATG+GGG | - | chr5_1:28591886-28591905 | None:intergenic | 30.0% | |
| GGCAGTATAAACACTTAAAT+GGG | - | chr5_1:28591887-28591906 | None:intergenic | 30.0% | |
| AGGCAGTATAAACACTTAAA+TGG | - | chr5_1:28591888-28591907 | None:intergenic | 30.0% | |
| !! | ATTTTGGTAAGTTCAAGACA+GGG | - | chr5_1:28591975-28591994 | None:intergenic | 30.0% |
| CTTACCAAAATCATCATTGA+AGG | + | chr5_1:28591984-28592003 | Msa0726910:CDS | 30.0% | |
| ! | TAAGCCTTCAATGATGATTT+TGG | - | chr5_1:28591991-28592010 | None:intergenic | 30.0% |
| ATCATCATTGAAGGCTTATT+TGG | + | chr5_1:28591993-28592012 | Msa0726910:CDS | 30.0% | |
| TCATCATTGAAGGCTTATTT+GGG | + | chr5_1:28591994-28592013 | Msa0726910:CDS | 30.0% | |
| ! | ACATAACTTTTCTTTCAGTG+AGG | + | chr5_1:28592163-28592182 | Msa0726910:intron | 30.0% |
| ! | CATAACTTTTCTTTCAGTGA+GGG | + | chr5_1:28592164-28592183 | Msa0726910:intron | 30.0% |
| ! | ATAACTTTTCTTTCAGTGAG+GGG | + | chr5_1:28592165-28592184 | Msa0726910:intron | 30.0% |
| ACGTATATTTCGCTATTTGA+AGG | + | chr5_1:28592250-28592269 | Msa0726910:intron | 30.0% | |
| AACCATTCATTCAACTTGAA+AGG | + | chr5_1:28592459-28592478 | Msa0726910:three_prime_UTR | 30.0% | |
| CTGTGATGACTTTATTGGAA+AGG | + | chr5_1:28588536-28588555 | Msa0726910:CDS | 35.0% | |
| ATGACTTTATTGGAAAGGAG+AGG | + | chr5_1:28588541-28588560 | Msa0726910:CDS | 35.0% | |
| GTTATCATTGCTTTCACCTT+TGG | + | chr5_1:28588619-28588638 | Msa0726910:CDS | 35.0% | |
| GAAAGTTGAGACAAGAAGTT+AGG | - | chr5_1:28588664-28588683 | None:intergenic | 35.0% | |
| CAGCTTATAATAGCAAAGAG+AGG | + | chr5_1:28588876-28588895 | Msa0726910:intron | 35.0% | |
| GCCAAAAAATAGTTGGATGA+AGG | - | chr5_1:28588928-28588947 | None:intergenic | 35.0% | |
| ! | GTGTAAAGAAAGCACAAACT+TGG | + | chr5_1:28589014-28589033 | Msa0726910:intron | 35.0% |
| ! | AAAGAAAGCACAAACTTGGA+CGG | + | chr5_1:28589018-28589037 | Msa0726910:intron | 35.0% |
| CAACCTCTATCGTATATATG+TGG | + | chr5_1:28589091-28589110 | Msa0726910:intron | 35.0% | |
| GTTCCACATATATACGATAG+AGG | - | chr5_1:28589097-28589116 | None:intergenic | 35.0% | |
| !! | TTTTTAGGAAGGGAGTTTTG+AGG | - | chr5_1:28589119-28589138 | None:intergenic | 35.0% |
| CACTTAGTGAAATTGACTAG+AGG | - | chr5_1:28589368-28589387 | None:intergenic | 35.0% | |
| ATAAGGCAAACAATAAGACG+GGG | + | chr5_1:28589834-28589853 | Msa0726910:intron | 35.0% | |
| ATGTAGCAAAAAACTGAGAG+TGG | + | chr5_1:28589868-28589887 | Msa0726910:intron | 35.0% | |
| AAAAAACTGAGAGTGGAGTA+TGG | + | chr5_1:28589875-28589894 | Msa0726910:intron | 35.0% | |
| AAAAACTGAGAGTGGAGTAT+GGG | + | chr5_1:28589876-28589895 | Msa0726910:intron | 35.0% | |
| CTTCCCTTCTTCTATCTATA+TGG | + | chr5_1:28590137-28590156 | Msa0726910:intron | 35.0% | |
| TCCCTTCTTCTATCTATATG+GGG | + | chr5_1:28590139-28590158 | Msa0726910:intron | 35.0% | |
| GATAAATTGCTCTGCTTCAT+TGG | + | chr5_1:28590235-28590254 | Msa0726910:intron | 35.0% | |
| CGGTCCTTAAAAACTAAAAC+AGG | + | chr5_1:28590313-28590332 | Msa0726910:intron | 35.0% | |
| AGGCCCCAAAATACTTAAAA+AGG | - | chr5_1:28590378-28590397 | None:intergenic | 35.0% | |
| !!! | TGGCCCTGTTTTAGTTTTTA+AGG | - | chr5_1:28590423-28590442 | None:intergenic | 35.0% |
| GGCCGTCTTAACAAATTTAT+TGG | - | chr5_1:28590443-28590462 | None:intergenic | 35.0% | |
| ! | GAATGTGTGATTTTTGATGC+AGG | + | chr5_1:28590599-28590618 | Msa0726910:intron | 35.0% |
| TGGACAAATTTCCAATGCTA+AGG | - | chr5_1:28590668-28590687 | None:intergenic | 35.0% | |
| AACCTTGTTCAATTTGTCAC+AGG | + | chr5_1:28590846-28590865 | Msa0726910:intron | 35.0% | |
| ! | AAAGCTGAGATTCTTTTTCC+AGG | + | chr5_1:28590906-28590925 | Msa0726910:CDS | 35.0% |
| CGTTCGTGAAAATTTCAATG+AGG | - | chr5_1:28591506-28591525 | None:intergenic | 35.0% | |
| CTGCAAATGGTTTAACACAA+AGG | - | chr5_1:28591737-28591756 | None:intergenic | 35.0% | |
| CTTTGTGTTAAACCATTTGC+AGG | + | chr5_1:28591735-28591754 | Msa0726910:intron | 35.0% | |
| TTAAACCATTTGCAGGTGTT+TGG | + | chr5_1:28591742-28591761 | Msa0726910:intron | 35.0% | |
| !! | TTTGGAAAGAGCACTTTCAT+TGG | + | chr5_1:28591760-28591779 | Msa0726910:CDS | 35.0% |
| ATTTAGCAACAAATGACCAG+TGG | + | chr5_1:28591839-28591858 | Msa0726910:CDS | 35.0% | |
| ! | CTTTATCTAAAGTGTTCCAC+TGG | - | chr5_1:28591858-28591877 | None:intergenic | 35.0% |
| CAGTGGAACACTTTAGATAA+AGG | + | chr5_1:28591856-28591875 | Msa0726910:CDS | 35.0% | |
| GTGGAACACTTTAGATAAAG+GGG | + | chr5_1:28591858-28591877 | Msa0726910:CDS | 35.0% | |
| ! | GAAGGTGATGTTTAGAATGA+TGG | - | chr5_1:28591944-28591963 | None:intergenic | 35.0% |
| !! | GATTTTGGTAAGTTCAAGAC+AGG | - | chr5_1:28591976-28591995 | None:intergenic | 35.0% |
| TGCGTATATTGAAGTCCAAA+TGG | - | chr5_1:28592223-28592242 | None:intergenic | 35.0% | |
| GCGAGTATAGAAAATCATCA+AGG | + | chr5_1:28592332-28592351 | Msa0726910:CDS | 35.0% | |
| AGGAGAACATATACATTGCT+TGG | + | chr5_1:28592352-28592371 | Msa0726910:CDS | 35.0% | |
| GGAGAACATATACATTGCTT+GGG | + | chr5_1:28592353-28592372 | Msa0726910:CDS | 35.0% | |
| !! | CACCTTTCAAGTTGAATGAA+TGG | - | chr5_1:28592464-28592483 | None:intergenic | 35.0% |
| ! | ATGTATATGGTGGAGAGCAA+GGG | + | chr5_1:28588460-28588479 | Msa0726910:CDS | 40.0% |
| !! | CTGGTTTCCTTGTTGTTCTT+GGG | + | chr5_1:28588502-28588521 | Msa0726910:CDS | 40.0% |
| !! | TGGTTTCCTTGTTGTTCTTG+GGG | + | chr5_1:28588503-28588522 | Msa0726910:CDS | 40.0% |
| TCCAATAAAGTCATCACAGC+TGG | - | chr5_1:28588535-28588554 | None:intergenic | 40.0% | |
| ! | AGTGATGGTGTAGTCAAGAT+AGG | - | chr5_1:28588584-28588603 | None:intergenic | 40.0% |
| CTACACCATCACTAATCTCT+TGG | + | chr5_1:28588591-28588610 | Msa0726910:CDS | 40.0% | |
| GCTTTCACCTTTGGTCAAAT+TGG | + | chr5_1:28588628-28588647 | Msa0726910:CDS | 40.0% | |
| ATCAGTGCCAATTTGACCAA+AGG | - | chr5_1:28588638-28588657 | None:intergenic | 40.0% | |
| CTTCTTGTCTCAACTTTCTC+AGG | + | chr5_1:28588666-28588685 | Msa0726910:CDS | 40.0% | |
| TTGTCTCAACTTTCTCAGGT+AGG | + | chr5_1:28588670-28588689 | Msa0726910:intron | 40.0% | |
| GAAAGTGGAAAAACCTGTTC+TGG | - | chr5_1:28589203-28589222 | None:intergenic | 40.0% | |
| ATGACCCACAAAGAAGAAAG+TGG | - | chr5_1:28589218-28589237 | None:intergenic | 40.0% | |
| !! | AATGCGAAAGAAATGGGTTG+AGG | - | chr5_1:28589247-28589266 | None:intergenic | 40.0% |
| AAAACTGAGAGTGGAGTATG+GGG | + | chr5_1:28589877-28589896 | Msa0726910:intron | 40.0% | |
| GCCCCATATAGATAGAAGAA+GGG | - | chr5_1:28590143-28590162 | None:intergenic | 40.0% | |
| AACCACACACTCTGTAATCA+AGG | - | chr5_1:28590267-28590286 | None:intergenic | 40.0% | |
| ATTACAGAGTGTGTGGTTGT+GGG | + | chr5_1:28590269-28590288 | Msa0726910:intron | 40.0% | |
| GCCTTCTGTTCTATTTGCAA+TGG | + | chr5_1:28590629-28590648 | Msa0726910:CDS | 40.0% | |
| GCCATTGCAAATAGAACAGA+AGG | - | chr5_1:28590633-28590652 | None:intergenic | 40.0% | |
| TCTGTTCTATTTGCAATGGC+TGG | + | chr5_1:28590633-28590652 | Msa0726910:CDS | 40.0% | |
| TTCTATTTGCAATGGCTGGT+GGG | + | chr5_1:28590637-28590656 | Msa0726910:CDS | 40.0% | |
| ATTTGTCCACTCAGTATGCT+TGG | + | chr5_1:28590679-28590698 | Msa0726910:CDS | 40.0% | |
| TTTGTCCACTCAGTATGCTT+GGG | + | chr5_1:28590680-28590699 | Msa0726910:CDS | 40.0% | |
| TGCCTGTGACAAATTGAACA+AGG | - | chr5_1:28590851-28590870 | None:intergenic | 40.0% | |
| ! | GAGATTCTTTTTCCAGGAGT+TGG | + | chr5_1:28590912-28590931 | Msa0726910:CDS | 40.0% |
| TGATAACAAGGCTAAGCTCA+AGG | + | chr5_1:28590989-28591008 | Msa0726910:CDS | 40.0% | |
| AGTAGATAAATTAGTCCCCC+TGG | - | chr5_1:28591286-28591305 | None:intergenic | 40.0% | |
| !! | GGAATATCGACTTGCCTTAA+TGG | - | chr5_1:28591485-28591504 | None:intergenic | 40.0% |
| TAAATTGTGGTCTGCAACTG+CGG | - | chr5_1:28591666-28591685 | None:intergenic | 40.0% | |
| TCTTTCCAAACACCTGCAAA+TGG | - | chr5_1:28591750-28591769 | None:intergenic | 40.0% | |
| AGTTCAAGACAGGGTGATAA+AGG | - | chr5_1:28591966-28591985 | None:intergenic | 40.0% | |
| TGAAGGCTTATTTGGGAGAT+TGG | + | chr5_1:28592001-28592020 | Msa0726910:CDS | 40.0% | |
| GCTTATTTGGGAGATTGGAA+TGG | + | chr5_1:28592006-28592025 | Msa0726910:CDS | 40.0% | |
| AGATTGGAATGGTAGAGGTT+GGG | + | chr5_1:28592017-28592036 | Msa0726910:CDS | 40.0% | |
| CTGGTCTACTTTGTGGATTT+GGG | + | chr5_1:28592049-28592068 | Msa0726910:CDS | 40.0% | |
| CTACTTTGTGGATTTGGGAA+TGG | + | chr5_1:28592054-28592073 | Msa0726910:CDS | 40.0% | |
| TGGGAATGGCCTTCAATTTA+TGG | + | chr5_1:28592068-28592087 | Msa0726910:CDS | 40.0% | |
| GGGAATGGCCTTCAATTTAT+GGG | + | chr5_1:28592069-28592088 | Msa0726910:CDS | 40.0% | |
| AATGGCCTTCAATTTATGGG+TGG | + | chr5_1:28592072-28592091 | Msa0726910:CDS | 40.0% | |
| CTTGTCCACCCATAAATTGA+AGG | - | chr5_1:28592080-28592099 | None:intergenic | 40.0% | |
| GGAAACCAGCATGCATACTA+TGG | - | chr5_1:28588491-28588510 | None:intergenic | 45.0% | |
| !! | GCTGGTTTCCTTGTTGTTCT+TGG | + | chr5_1:28588501-28588520 | Msa0726910:CDS | 45.0% |
| GCCAGCTGTGATGACTTTAT+TGG | + | chr5_1:28588531-28588550 | Msa0726910:CDS | 45.0% | |
| TAGTCAAGATAGGTGTGCTG+AGG | - | chr5_1:28588574-28588593 | None:intergenic | 45.0% | |
| AGCAGCCAAGAGATTAGTGA+TGG | - | chr5_1:28588599-28588618 | None:intergenic | 45.0% | |
| TGGCAAAGAGAATCCAGAAC+AGG | + | chr5_1:28589187-28589206 | Msa0726910:intron | 45.0% | |
| AAACTGAGAGTGGAGTATGG+GGG | + | chr5_1:28589878-28589897 | Msa0726910:intron | 45.0% | |
| GGCCCCATATAGATAGAAGA+AGG | - | chr5_1:28590144-28590163 | None:intergenic | 45.0% | |
| CTCCTTGATTACAGAGTGTG+TGG | + | chr5_1:28590262-28590281 | Msa0726910:intron | 45.0% | |
| GATTACAGAGTGTGTGGTTG+TGG | + | chr5_1:28590268-28590287 | Msa0726910:intron | 45.0% | |
| GTTCTATTTGCAATGGCTGG+TGG | + | chr5_1:28590636-28590655 | Msa0726910:CDS | 45.0% | |
| TCTATTTGCAATGGCTGGTG+GGG | + | chr5_1:28590638-28590657 | Msa0726910:CDS | 45.0% | |
| AAAAGCCCAAGCATACTGAG+TGG | - | chr5_1:28590688-28590707 | None:intergenic | 45.0% | |
| ! | CAGTATGCTTGGGCTTTTGT+TGG | + | chr5_1:28590690-28590709 | Msa0726910:CDS | 45.0% |
| !!! | TCCAGGAGTTGGTTGCTTTT+TGG | + | chr5_1:28590923-28590942 | Msa0726910:CDS | 45.0% |
| ACCAAAAAGCAACCAACTCC+TGG | - | chr5_1:28590927-28590946 | None:intergenic | 45.0% | |
| AGTGCAAACAAAGCCAAAGC+AGG | + | chr5_1:28591421-28591440 | Msa0726910:CDS | 45.0% | |
| AAACACTGCAGTTCCTGCTT+TGG | - | chr5_1:28591437-28591456 | None:intergenic | 45.0% | |
| CAAGACAGGGTGATAAAGGA+AGG | - | chr5_1:28591962-28591981 | None:intergenic | 45.0% | |
| TTGGGAGATTGGAATGGTAG+AGG | + | chr5_1:28592012-28592031 | Msa0726910:CDS | 45.0% | |
| GAGATTGGAATGGTAGAGGT+TGG | + | chr5_1:28592016-28592035 | Msa0726910:CDS | 45.0% | |
| !! | TTGTTGGCTGGTCTACTTTG+TGG | + | chr5_1:28592042-28592061 | Msa0726910:CDS | 45.0% |
| ! | GCTGGTCTACTTTGTGGATT+TGG | + | chr5_1:28592048-28592067 | Msa0726910:CDS | 45.0% |
| !! | TGAAGGAGTGTTGTTTGTGC+AGG | + | chr5_1:28592267-28592286 | Msa0726910:intron | 45.0% |
| TTCCACTTGTGAGCACTTTC+TGG | + | chr5_1:28592293-28592312 | Msa0726910:CDS | 45.0% | |
| TCCACTTGTGAGCACTTTCT+GGG | + | chr5_1:28592294-28592313 | Msa0726910:CDS | 45.0% | |
| !!! | TTCTGGGGCGTTGTTTTGTT+CGG | + | chr5_1:28592310-28592329 | Msa0726910:CDS | 45.0% |
| ! | TATATGGTGGAGAGCAAGGG+AGG | + | chr5_1:28588463-28588482 | Msa0726910:CDS | 50.0% |
| ! | AGGTGCCATAGTATGCATGC+TGG | + | chr5_1:28588483-28588502 | Msa0726910:CDS | 50.0% |
| CCATGTCCCCAAGAACAACA+AGG | - | chr5_1:28588512-28588531 | None:intergenic | 50.0% | |
| !! | CCTTGTTGTTCTTGGGGACA+TGG | + | chr5_1:28588509-28588528 | Msa0726910:CDS | 50.0% |
| TGTGTTCAGACTGAGCAGTG+CGG | - | chr5_1:28589754-28589773 | None:intergenic | 50.0% | |
| ! | TGGTAGAGGTTGGGCATTGT+TGG | + | chr5_1:28592026-28592045 | Msa0726910:CDS | 50.0% |
| TTTATGGGTGGACAAGCTGC+TGG | + | chr5_1:28592084-28592103 | Msa0726910:CDS | 50.0% | |
| CCACTTGTGAGCACTTTCTG+GGG | + | chr5_1:28592295-28592314 | Msa0726910:CDS | 50.0% | |
| CAGTGCTCATGGCATCATCT+GGG | + | chr5_1:28592407-28592426 | Msa0726910:CDS | 50.0% | |
| GGTGGGGTTGTCCTTAGCAT+TGG | + | chr5_1:28590654-28590673 | Msa0726910:CDS | 55.0% | |
| ! | AGAGGTTGGGCATTGTTGGC+TGG | + | chr5_1:28592030-28592049 | Msa0726910:CDS | 55.0% |
| !! | CCCCAGAAAGTGCTCACAAG+TGG | - | chr5_1:28592298-28592317 | None:intergenic | 55.0% |
| GCAGTGCTCATGGCATCATC+TGG | + | chr5_1:28592406-28592425 | Msa0726910:CDS | 55.0% | |
| TGCAGCTGTCGCAGTGCTCA+TGG | + | chr5_1:28592396-28592415 | Msa0726910:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 28588460 | 28592583 | 28588460 | ID=Msa0726910;Name=Msa0726910 |
| chr5_1 | mRNA | 28588460 | 28592583 | 28588460 | ID=Msa0726910-mRNA-1;Parent=Msa0726910;Name=Msa0726910-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.83|0.71|1|1|1|7|142|400 |
| chr5_1 | exon | 28588460 | 28588687 | 28588460 | ID=Msa0726910-mRNA-1:exon:9896;Parent=Msa0726910-mRNA-1 |
| chr5_1 | exon | 28590621 | 28590759 | 28590621 | ID=Msa0726910-mRNA-1:exon:9897;Parent=Msa0726910-mRNA-1 |
| chr5_1 | exon | 28590868 | 28591042 | 28590868 | ID=Msa0726910-mRNA-1:exon:9898;Parent=Msa0726910-mRNA-1 |
| chr5_1 | exon | 28591287 | 28591324 | 28591287 | ID=Msa0726910-mRNA-1:exon:9899;Parent=Msa0726910-mRNA-1 |
| chr5_1 | exon | 28591395 | 28591489 | 28591395 | ID=Msa0726910-mRNA-1:exon:9900;Parent=Msa0726910-mRNA-1 |
| chr5_1 | exon | 28591757 | 28592131 | 28591757 | ID=Msa0726910-mRNA-1:exon:9901;Parent=Msa0726910-mRNA-1 |
| chr5_1 | exon | 28592289 | 28592583 | 28592289 | ID=Msa0726910-mRNA-1:exon:9902;Parent=Msa0726910-mRNA-1 |
| chr5_1 | CDS | 28588460 | 28588687 | 28588460 | ID=Msa0726910-mRNA-1:cds;Parent=Msa0726910-mRNA-1 |
| chr5_1 | CDS | 28590621 | 28590759 | 28590621 | ID=Msa0726910-mRNA-1:cds;Parent=Msa0726910-mRNA-1 |
| chr5_1 | CDS | 28590868 | 28591042 | 28590868 | ID=Msa0726910-mRNA-1:cds;Parent=Msa0726910-mRNA-1 |
| chr5_1 | CDS | 28591287 | 28591324 | 28591287 | ID=Msa0726910-mRNA-1:cds;Parent=Msa0726910-mRNA-1 |
| chr5_1 | CDS | 28591395 | 28591489 | 28591395 | ID=Msa0726910-mRNA-1:cds;Parent=Msa0726910-mRNA-1 |
| chr5_1 | CDS | 28591757 | 28592131 | 28591757 | ID=Msa0726910-mRNA-1:cds;Parent=Msa0726910-mRNA-1 |
| chr5_1 | CDS | 28592289 | 28592441 | 28592289 | ID=Msa0726910-mRNA-1:cds;Parent=Msa0726910-mRNA-1 |
| chr5_1 | three_prime_UTR | 28592442 | 28592583 | 28592442 | ID=Msa0726910-mRNA-1:three_prime_utr;Parent=Msa0726910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
