Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0729290 | PNY09438.1 | 100.000 | 55 | 0 | 0 | 1 | 55 | 1 | 55 | 7.52e-29 | 106 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0729290 | A0A2K3P2B5 | 100.000 | 55 | 0 | 0 | 1 | 55 | 1 | 55 | 3.59e-29 | 106 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0729290 | Msa0807640 | 0.919315 | 5.246310e-87 | -8.615850e-47 |
| Msa0729290 | Msa0807650 | 0.985609 | 4.202839e-164 | -8.615850e-47 |
| Msa0138390 | Msa0729290 | 0.811885 | 5.596851e-51 | -8.615850e-47 |
| Msa0376450 | Msa0729290 | 0.801458 | 8.919614e-49 | -8.615850e-47 |
| Msa0425120 | Msa0729290 | 0.815039 | 1.134023e-51 | -8.615850e-47 |
| Msa0240450 | Msa0729290 | 0.813362 | 2.659472e-51 | -8.615850e-47 |
| Msa0315930 | Msa0729290 | 0.817224 | 3.684674e-52 | -8.615850e-47 |
| Msa0516510 | Msa0729290 | 0.813768 | 2.165634e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0729290 | MtrunA17_Chr4g0021531 | 98.182 | 55 | 0 | 1 | 1 | 55 | 1 | 54 | 1.22e-30 | 100 |
| Msa0729290 | MtrunA17_Chr8g0368651 | 74.545 | 55 | 10 | 1 | 1 | 55 | 1 | 51 | 9.01e-21 | 76.3 |
| Msa0729290 | MtrunA17_Chr7g0220791 | 75.000 | 36 | 9 | 0 | 20 | 55 | 17 | 52 | 1.39e-16 | 65.5 |
| Msa0729290 | MtrunA17_Chr7g0220801 | 75.000 | 36 | 9 | 0 | 20 | 55 | 17 | 52 | 1.39e-16 | 65.5 |
| Msa0729290 | MtrunA17_Chr7g0220831 | 72.222 | 36 | 10 | 0 | 20 | 55 | 17 | 52 | 9.17e-16 | 63.5 |
| Msa0729290 | MtrunA17_Chr4g0020171 | 72.222 | 36 | 10 | 0 | 20 | 55 | 17 | 52 | 9.17e-16 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 136 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTCACAGATCTGACTTTA+AGG | 0.158308 | 5_1:+36156229 | None:intergenic |
| AAGTCACATATTTCAGAATT+TGG | 0.203322 | 5_1:+36155889 | None:intergenic |
| CAGAGTAAACATGCCAATTC+TGG | 0.233926 | 5_1:+36156064 | None:intergenic |
| AGGCAGCACGGCTTATATTA+TGG | 0.244404 | 5_1:-36156103 | Msa0729290:three_prime_UTR |
| AATCCCACCCATATTGAAAT+TGG | 0.267826 | 5_1:-36156265 | Msa0729290:three_prime_UTR |
| TAAATAAGTGTCGCCTATTC+AGG | 0.281649 | 5_1:-36155436 | Msa0729290:three_prime_UTR |
| CACCCATTCCAAGCCCTTCT+AGG | 0.285576 | 5_1:+36155593 | None:intergenic |
| TGGGATTGCAAGCAGTAATT+TGG | 0.289958 | 5_1:+36156281 | None:intergenic |
| CGTGAAGAGAGGAGCCTAGA+AGG | 0.310976 | 5_1:-36155607 | Msa0729290:three_prime_UTR |
| GGACTCGGCCAATTTCAATA+TGG | 0.320655 | 5_1:+36156257 | None:intergenic |
| TTGAAATAAAGTGCATGTTT+TGG | 0.323163 | 5_1:-36155308 | Msa0729290:three_prime_UTR |
| CGGCAGTCTTGACAAACTTT+TGG | 0.351241 | 5_1:+36155557 | None:intergenic |
| GAGAATCAGTATGGAATATC+AGG | 0.363527 | 5_1:+36156723 | None:intergenic |
| GGGTTGTTCGCTGGATGTTA+AGG | 0.371228 | 5_1:-36155638 | Msa0729290:three_prime_UTR |
| TCTTGTAGGCATAAACAAAA+AGG | 0.372256 | 5_1:+36156328 | None:intergenic |
| CAATGAGTTCACGCCTGAAT+AGG | 0.377050 | 5_1:+36155423 | None:intergenic |
| AGATCTGACTTTAAGGGAAA+TGG | 0.377918 | 5_1:+36156236 | None:intergenic |
| GCCATGGCAGTTTCTGCAAT+TGG | 0.380504 | 5_1:-36156540 | Msa0729290:three_prime_UTR |
| TAATCAGATATAATCTAATC+AGG | 0.387087 | 5_1:-36157686 | Msa0729290:intron |
| GCATAACTGAACCCATCTTC+TGG | 0.388865 | 5_1:+36155796 | None:intergenic |
| GCTGTCCTTGATGGCTACTT+TGG | 0.400659 | 5_1:-36156138 | Msa0729290:three_prime_UTR |
| ATCTCTCACAAAATCCCAAC+TGG | 0.403145 | 5_1:-36156436 | Msa0729290:three_prime_UTR |
| ACAATCGCAAAGAGAGGGTT+TGG | 0.404403 | 5_1:+36156615 | None:intergenic |
| GATGGCTACTTTGGAAAGCT+TGG | 0.406979 | 5_1:-36156129 | Msa0729290:three_prime_UTR |
| CAGCACTTAAGTGTTGATCT+AGG | 0.408052 | 5_1:+36155523 | None:intergenic |
| ATGGCTACTTTGGAAAGCTT+GGG | 0.411273 | 5_1:-36156128 | Msa0729290:three_prime_UTR |
| GAAGAAGTAGCTGTCCTTGA+TGG | 0.417679 | 5_1:-36156147 | Msa0729290:three_prime_UTR |
| GGCAGCACGGCTTATATTAT+GGG | 0.419414 | 5_1:-36156102 | Msa0729290:three_prime_UTR |
| TACTTTGGAAAGCTTGGGTC+AGG | 0.421656 | 5_1:-36156123 | Msa0729290:three_prime_UTR |
| TGCAAGCAAGTCGTTTGAGC+AGG | 0.423080 | 5_1:-36155659 | Msa0729290:three_prime_UTR |
| ATTGCAATTTAACCTTTGTC+AGG | 0.423723 | 5_1:+36155096 | None:intergenic |
| TTTCCTGATGCCAGAGTTCA+CGG | 0.425895 | 5_1:+36155918 | None:intergenic |
| TTCTGTTTGAACTGTGGCCA+TGG | 0.427667 | 5_1:-36156556 | Msa0729290:three_prime_UTR |
| GTGTGTAGACAGAGTCGTTT+GGG | 0.432980 | 5_1:+36156022 | None:intergenic |
| GATCCGATGAAGCCCAGAAT+TGG | 0.434903 | 5_1:-36156077 | Msa0729290:three_prime_UTR |
| GGTTGTTCGCTGGATGTTAA+GGG | 0.435015 | 5_1:-36155637 | Msa0729290:three_prime_UTR |
| CCTCACAGATCTGACTTTAA+GGG | 0.436074 | 5_1:+36156230 | None:intergenic |
| TGAAGGATTTGAAAAGAGGT+TGG | 0.442885 | 5_1:-36156514 | Msa0729290:three_prime_UTR |
| TTCGTTTGATTTGATCTTGG+TGG | 0.444673 | 5_1:-36157738 | Msa0729290:five_prime_UTR |
| TCGTTTGATTTGATCTTGGT+GGG | 0.451796 | 5_1:-36157737 | Msa0729290:five_prime_UTR |
| ATTCATGTTACTCCAGAAGA+TGG | 0.452259 | 5_1:-36155808 | Msa0729290:three_prime_UTR |
| GCCAGAGTTCACGGTCATCT+TGG | 0.454845 | 5_1:+36155927 | None:intergenic |
| ACAGCTACAGAAAACTCATT+TGG | 0.455280 | 5_1:+36155694 | None:intergenic |
| GTTTGAGCAGGGTTGTTCGC+TGG | 0.461205 | 5_1:-36155647 | Msa0729290:three_prime_UTR |
| ATACAATACTAAACAAATGA+TGG | 0.465892 | 5_1:+36155119 | None:intergenic |
| CAGGGGAACGAGAATCAGTA+TGG | 0.466418 | 5_1:+36156714 | None:intergenic |
| GAGAGGAGCCTAGAAGGGCT+TGG | 0.469686 | 5_1:-36155601 | Msa0729290:three_prime_UTR |
| GACAGAGTCGTTTGGGCTCA+CGG | 0.470139 | 5_1:+36156029 | None:intergenic |
| AGCAATGAATCTGAATGAAT+TGG | 0.470356 | 5_1:-36155743 | Msa0729290:three_prime_UTR |
| AGTGGCGATGAGGGAAAGAC+TGG | 0.471304 | 5_1:+36156175 | None:intergenic |
| CAGTAATTTGGTAGTACCAC+AGG | 0.471609 | 5_1:+36156293 | None:intergenic |
| AGCCTAGAAGGGCTTGGAAT+GGG | 0.471610 | 5_1:-36155595 | Msa0729290:three_prime_UTR |
| GACTCGGCCAATTTCAATAT+GGG | 0.472381 | 5_1:+36156258 | None:intergenic |
| TGACCGTGAACTCTGGCATC+AGG | 0.476580 | 5_1:-36155921 | Msa0729290:three_prime_UTR |
| AACAGGACTGAATGAGCTAA+TGG | 0.478430 | 5_1:-36157000 | Msa0729290:intron |
| TATGCAAGCTTTGAGACTGC+TGG | 0.481178 | 5_1:-36155778 | Msa0729290:three_prime_UTR |
| AGAGTAAACATGCCAATTCT+GGG | 0.482441 | 5_1:+36156065 | None:intergenic |
| TGATGATTTACTACTACTAC+TGG | 0.483028 | 5_1:+36156953 | None:intergenic |
| TGATGATGAGAGACATGTTT+CGG | 0.483059 | 5_1:-36155190 | Msa0729290:three_prime_UTR |
| ATCAAGGACAGCTACTTCTT+CGG | 0.483365 | 5_1:+36156149 | None:intergenic |
| AGTGTGTAGACAGAGTCGTT+TGG | 0.483944 | 5_1:+36156021 | None:intergenic |
| GAAACAATGGTGCACTCAGC+TGG | 0.491991 | 5_1:+36156399 | None:intergenic |
| CTACAGAAAACTCATTTGGT+TGG | 0.492466 | 5_1:+36155698 | None:intergenic |
| GACTTTAAGGGAAATGGACT+CGG | 0.492549 | 5_1:+36156242 | None:intergenic |
| AATATTTATCAGATAGTAGT+GGG | 0.499526 | 5_1:-36155229 | Msa0729290:three_prime_UTR |
| GCCAAGATGACCGTGAACTC+TGG | 0.501551 | 5_1:-36155928 | Msa0729290:three_prime_UTR |
| TGAGGGAAAGACTGGGCACC+AGG | 0.502643 | 5_1:+36156183 | None:intergenic |
| TCAAATGAAAATAACAATGA+AGG | 0.513163 | 5_1:+36155339 | None:intergenic |
| CAGCTACTTCTTCGGAAAAG+TGG | 0.518616 | 5_1:+36156157 | None:intergenic |
| TGCAAGAATCTCATCCAGTT+GGG | 0.520638 | 5_1:+36156422 | None:intergenic |
| TGCTTTCTCTCTGTCTAAGC+CGG | 0.526097 | 5_1:+36155984 | None:intergenic |
| CACTGCTGTTTATGTGTCGA+AGG | 0.526482 | 5_1:-36155370 | Msa0729290:three_prime_UTR |
| AACTTCTTGATTCCACCGTT+AGG | 0.527282 | 5_1:+36156879 | None:intergenic |
| TATTCAATGAATTCTGTTGA+GGG | 0.527553 | 5_1:-36155847 | Msa0729290:three_prime_UTR |
| GAGGAAAACGCTTACAGATA+CGG | 0.529118 | 5_1:+36157839 | None:intergenic |
| ACACTCGAGATGTGCATGAC+CGG | 0.532189 | 5_1:-36156003 | Msa0729290:three_prime_UTR |
| CTAGATCAACACTTAAGTGC+TGG | 0.535337 | 5_1:-36155522 | Msa0729290:three_prime_UTR |
| GTGCAAGAATCTCATCCAGT+TGG | 0.545202 | 5_1:+36156421 | None:intergenic |
| CTTCGGAAAAGTGGCGATGA+GGG | 0.545675 | 5_1:+36156166 | None:intergenic |
| ATCTTAAACCCCTCCCGTGA+GGG | 0.547240 | 5_1:+36156457 | None:intergenic |
| ATGCCAATTCTGGGCTTCAT+CGG | 0.548303 | 5_1:+36156074 | None:intergenic |
| GCTTTCCAAAGTAGCCATCA+AGG | 0.551420 | 5_1:+36156133 | None:intergenic |
| GTCTTCAATGCTGTATCCGA+GGG | 0.553166 | 5_1:+36156908 | None:intergenic |
| ATCTTCTGGAGTAACATGAA+TGG | 0.557011 | 5_1:+36155810 | None:intergenic |
| GAGCCTAGAAGGGCTTGGAA+TGG | 0.557133 | 5_1:-36155596 | Msa0729290:three_prime_UTR |
| AATGAATCTGAATGAATTGG+TGG | 0.561345 | 5_1:-36155740 | Msa0729290:three_prime_UTR |
| GTCAACATCGTCATTTGCTA+AGG | 0.561466 | 5_1:+36156374 | None:intergenic |
| TTCATGTTACTCCAGAAGAT+GGG | 0.561810 | 5_1:-36155807 | Msa0729290:three_prime_UTR |
| TACAATACTAAACAAATGAT+GGG | 0.562175 | 5_1:+36155120 | None:intergenic |
| TTATTCAATGAATTCTGTTG+AGG | 0.563786 | 5_1:-36155848 | Msa0729290:three_prime_UTR |
| AATGAGCTAATGGAGTCTAA+AGG | 0.565907 | 5_1:-36156990 | Msa0729290:exon |
| CGGCCAATTTCAATATGGGT+GGG | 0.578309 | 5_1:+36156262 | None:intergenic |
| GTGTCTTTCTGTTTGAACTG+TGG | 0.582506 | 5_1:-36156562 | Msa0729290:three_prime_UTR |
| CAATATTTATCAGATAGTAG+TGG | 0.583204 | 5_1:-36155230 | Msa0729290:three_prime_UTR |
| GTGAAGAGAGGAGCCTAGAA+GGG | 0.583585 | 5_1:-36155606 | Msa0729290:three_prime_UTR |
| CTAGAAGGGCTTGGAATGGG+TGG | 0.585068 | 5_1:-36155592 | Msa0729290:three_prime_UTR |
| GCAAGCAAGTCGTTTGAGCA+GGG | 0.585251 | 5_1:-36155658 | Msa0729290:three_prime_UTR |
| TTAGTATTGTATCCTGACAA+AGG | 0.589345 | 5_1:-36155108 | Msa0729290:three_prime_UTR |
| GTTTACTTGATAGAGTTGCA+TGG | 0.594564 | 5_1:+36155161 | None:intergenic |
| ATTGAAGACATTCGTCCTAA+CGG | 0.595565 | 5_1:-36156894 | Msa0729290:CDS |
| TCGGCCAATTTCAATATGGG+TGG | 0.595661 | 5_1:+36156261 | None:intergenic |
| AAAGCTTGGGTCAGGCAGCA+CGG | 0.596517 | 5_1:-36156115 | Msa0729290:three_prime_UTR |
| AAAGACACACAGAAGAAACA+AGG | 0.599383 | 5_1:+36156577 | None:intergenic |
| ACCAATTGCAGAAACTGCCA+TGG | 0.605456 | 5_1:+36156539 | None:intergenic |
| CTTAGACAGAGAGAAAGCAT+TGG | 0.606273 | 5_1:-36155980 | Msa0729290:three_prime_UTR |
| AAGAGTACAATCGCAAAGAG+AGG | 0.607802 | 5_1:+36156609 | None:intergenic |
| TGTCTTCAATGCTGTATCCG+AGG | 0.610451 | 5_1:+36156907 | None:intergenic |
| TCTGAATGAATTGGTGGTGA+AGG | 0.612452 | 5_1:-36155734 | Msa0729290:three_prime_UTR |
| TTACAGATACGGAGTGGGAA+GGG | 0.617832 | 5_1:+36157850 | None:intergenic |
| CTTACAGATACGGAGTGGGA+AGG | 0.617953 | 5_1:+36157849 | None:intergenic |
| AGGGATACTGTCGTGAAGAG+AGG | 0.619171 | 5_1:-36155618 | Msa0729290:three_prime_UTR |
| TCTTCGGAAAAGTGGCGATG+AGG | 0.619318 | 5_1:+36156165 | None:intergenic |
| TTATTCTACGAAGCTCCCCT+CGG | 0.625181 | 5_1:-36156924 | Msa0729290:CDS |
| AGAGTACAATCGCAAAGAGA+GGG | 0.626137 | 5_1:+36156610 | None:intergenic |
| TGATCTAGGCGAGCCACAGT+CGG | 0.631715 | 5_1:+36155537 | None:intergenic |
| TTTGTCAAGACTGCCGACTG+TGG | 0.633166 | 5_1:-36155550 | Msa0729290:three_prime_UTR |
| ATCAGTATGGAATATCAGGA+TGG | 0.643271 | 5_1:+36156727 | None:intergenic |
| GAGCTAATGGAGTCTAAAGG+AGG | 0.647473 | 5_1:-36156987 | Msa0729290:exon |
| AACGCTTACAGATACGGAGT+GGG | 0.648654 | 5_1:+36157845 | None:intergenic |
| TGGGCTCACGGAATCTGCAG+AGG | 0.650938 | 5_1:+36156041 | None:intergenic |
| AATACTAAACAAATGATGGG+TGG | 0.654569 | 5_1:+36155123 | None:intergenic |
| AAAGCGCGGAGAAAACGAGA+CGG | 0.658328 | 5_1:+36157873 | None:intergenic |
| ATTTGCTAAGGAAGAAACAA+TGG | 0.659529 | 5_1:+36156386 | None:intergenic |
| CGGAGTGGGAAGGGAAAGCG+CGG | 0.661519 | 5_1:+36157859 | None:intergenic |
| GCTGGACTCAGACAGAACAT+AGG | 0.663634 | 5_1:+36156350 | None:intergenic |
| AGCACGGCTTATATTATGGG+TGG | 0.666611 | 5_1:-36156099 | Msa0729290:three_prime_UTR |
| GATCTTAAACCCCTCCCGTG+AGG | 0.672665 | 5_1:+36156456 | None:intergenic |
| AAACGCTTACAGATACGGAG+TGG | 0.687320 | 5_1:+36157844 | None:intergenic |
| GTGGCGATGAGGGAAAGACT+GGG | 0.690654 | 5_1:+36156176 | None:intergenic |
| CCCTTAAAGTCAGATCTGTG+AGG | 0.691736 | 5_1:-36156230 | Msa0729290:three_prime_UTR |
| AAGATCATAATCAAAACCTG+TGG | 0.691808 | 5_1:-36156309 | Msa0729290:three_prime_UTR |
| GAAGACATTCGTCCTAACGG+TGG | 0.692317 | 5_1:-36156891 | Msa0729290:CDS |
| GAATTCATTGAATAACCACA+AGG | 0.720077 | 5_1:+36155856 | None:intergenic |
| ATATTTATCAGATAGTAGTG+GGG | 0.736280 | 5_1:-36155228 | Msa0729290:three_prime_UTR |
| AGATCTGTGAGGTACACCCG+AGG | 0.738828 | 5_1:-36156219 | Msa0729290:three_prime_UTR |
| TCTTCAATGCTGTATCCGAG+GGG | 0.754164 | 5_1:+36156909 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTCAATTGATTTTTTAT+TGG | - | chr5_1:36155719-36155738 | Msa0729290:three_prime_UTR | 10.0% |
| !! | TTATATAAAATCAAATTTCT+TGG | + | chr5_1:36155781-36155800 | None:intergenic | 10.0% |
| !! | TTTCATTTGTATTATCATTA+TGG | - | chr5_1:36155442-36155461 | Msa0729290:three_prime_UTR | 15.0% |
| !! | TAATCAGATATAATCTAATC+AGG | - | chr5_1:36155361-36155380 | Msa0729290:three_prime_UTR | 20.0% |
| !!! | AAGTGACAAAAAGTATTAAA+GGG | + | chr5_1:36155667-36155686 | None:intergenic | 20.0% |
| !!! | AAAGTGACAAAAAGTATTAA+AGG | + | chr5_1:36155668-36155687 | None:intergenic | 20.0% |
| !! | TAAAAAAATGAGACAGAATA+TGG | + | chr5_1:36155979-36155998 | None:intergenic | 20.0% |
| !! | ACAAGAGTTACAAAAAAAAT+TGG | + | chr5_1:36156284-36156303 | None:intergenic | 20.0% |
| !!! | AGCTTTTTTTGTTTTTGTTT+AGG | - | chr5_1:36156376-36156395 | Msa0729290:three_prime_UTR | 20.0% |
| !! | TCAAATGAAAATAACAATGA+AGG | + | chr5_1:36157711-36157730 | None:intergenic | 20.0% |
| !! | AATATTTATCAGATAGTAGT+GGG | - | chr5_1:36157818-36157837 | Msa0729290:intron | 20.0% |
| !! | TACAATACTAAACAAATGAT+GGG | + | chr5_1:36157930-36157949 | None:intergenic | 20.0% |
| !! | ATACAATACTAAACAAATGA+TGG | + | chr5_1:36157931-36157950 | None:intergenic | 20.0% |
| ! | GAAGAAAACGATAACAAAAA+CGG | + | chr5_1:36155240-36155259 | None:intergenic | 25.0% |
| !! | TCAATCATTTAAAACCAAGA+TGG | + | chr5_1:36155745-36155764 | None:intergenic | 25.0% |
| !!! | TTTGTTTTAAGCCATTTTGT+TGG | - | chr5_1:36155930-36155949 | Msa0729290:three_prime_UTR | 25.0% |
| !! | GGTTCTAACATTATTTCATA+TGG | - | chr5_1:36156023-36156042 | Msa0729290:three_prime_UTR | 25.0% |
| ! | ACATTATTTCATATGGTAAC+AGG | - | chr5_1:36156030-36156049 | Msa0729290:three_prime_UTR | 25.0% |
| ! | CATAGAATTCACAATATCAA+AGG | + | chr5_1:36156231-36156250 | None:intergenic | 25.0% |
| !!! | TTTGGAAAGATGTATTTTGA+AGG | + | chr5_1:36156417-36156436 | None:intergenic | 25.0% |
| ! | AAGTCACATATTTCAGAATT+TGG | + | chr5_1:36157161-36157180 | None:intergenic | 25.0% |
| ! | TTATTCAATGAATTCTGTTG+AGG | - | chr5_1:36157199-36157218 | Msa0729290:intron | 25.0% |
| ! | TATTCAATGAATTCTGTTGA+GGG | - | chr5_1:36157200-36157219 | Msa0729290:intron | 25.0% |
| !! | TTGAAATAAAGTGCATGTTT+TGG | - | chr5_1:36157739-36157758 | Msa0729290:five_prime_UTR | 25.0% |
| !! | TGAAATAAAGTGCATGTTTT+GGG | - | chr5_1:36157740-36157759 | Msa0729290:five_prime_UTR | 25.0% |
| ! | CAATATTTATCAGATAGTAG+TGG | - | chr5_1:36157817-36157836 | Msa0729290:intron | 25.0% |
| ! | ATATTTATCAGATAGTAGTG+GGG | - | chr5_1:36157819-36157838 | Msa0729290:intron | 25.0% |
| ! | TTGTCTCTCTTTTCTTTTCT+AGG | - | chr5_1:36155147-36155166 | Msa0729290:three_prime_UTR | 30.0% |
| ! | TGTCTCTCTTTTCTTTTCTA+GGG | - | chr5_1:36155148-36155167 | Msa0729290:three_prime_UTR | 30.0% |
| AAAACGATAACAAAAACGGA+AGG | + | chr5_1:36155236-36155255 | None:intergenic | 30.0% | |
| !!! | GTTTTCGTTTGATTTGATCT+TGG | - | chr5_1:36155306-36155325 | Msa0729290:three_prime_UTR | 30.0% |
| !!! | TTTTAAGGTTTTGAAAGCTG+CGG | - | chr5_1:36155333-36155352 | Msa0729290:three_prime_UTR | 30.0% |
| TCTGAATGAAAAGAAAGAAC+AGG | + | chr5_1:36155389-36155408 | None:intergenic | 30.0% | |
| TTGTCATGTCTATGATTATC+TGG | - | chr5_1:36155605-36155624 | Msa0729290:three_prime_UTR | 30.0% | |
| TGTCATGTCTATGATTATCT+GGG | - | chr5_1:36155606-36155625 | Msa0729290:three_prime_UTR | 30.0% | |
| AAAATTCCAACAAACAATCC+TGG | + | chr5_1:36155637-36155656 | None:intergenic | 30.0% | |
| !!! | TGATTTTTTATTGGCCATCT+TGG | - | chr5_1:36155728-36155747 | Msa0729290:three_prime_UTR | 30.0% |
| TTAAAACAAAACACCCATCA+AGG | + | chr5_1:36155920-36155939 | None:intergenic | 30.0% | |
| ! | TGTCTGTGATTTTACAATGT+AGG | - | chr5_1:36156001-36156020 | Msa0729290:three_prime_UTR | 30.0% |
| ! | GTCTGTGATTTTACAATGTA+GGG | - | chr5_1:36156002-36156021 | Msa0729290:three_prime_UTR | 30.0% |
| TGATGATTTACTACTACTAC+TGG | + | chr5_1:36156097-36156116 | None:intergenic | 30.0% | |
| !!! | GTTTTGAAGGATTTGAAAAG+AGG | - | chr5_1:36156529-36156548 | Msa0729290:three_prime_UTR | 30.0% |
| ! | ATTTGCTAAGGAAGAAACAA+TGG | + | chr5_1:36156664-36156683 | None:intergenic | 30.0% |
| TCTTGTAGGCATAAACAAAA+AGG | + | chr5_1:36156722-36156741 | None:intergenic | 30.0% | |
| !!! | GGTTTTGATTATGATCTTGT+AGG | + | chr5_1:36156736-36156755 | None:intergenic | 30.0% |
| AAGATCATAATCAAAACCTG+TGG | - | chr5_1:36156738-36156757 | Msa0729290:exon | 30.0% | |
| GAATTCATTGAATAACCACA+AGG | + | chr5_1:36157194-36157213 | None:intergenic | 30.0% | |
| AGCAATGAATCTGAATGAAT+TGG | - | chr5_1:36157304-36157323 | Msa0729290:intron | 30.0% | |
| AATGAATCTGAATGAATTGG+TGG | - | chr5_1:36157307-36157326 | Msa0729290:intron | 30.0% | |
| ! | AATACTAAACAAATGATGGG+TGG | + | chr5_1:36157927-36157946 | None:intergenic | 30.0% |
| TTAGTATTGTATCCTGACAA+AGG | - | chr5_1:36157939-36157958 | Msa0729290:five_prime_UTR | 30.0% | |
| !! | TTCGTTTGATTTGATCTTGG+TGG | - | chr5_1:36155309-36155328 | Msa0729290:three_prime_UTR | 35.0% |
| !! | TCGTTTGATTTGATCTTGGT+GGG | - | chr5_1:36155310-36155329 | Msa0729290:three_prime_UTR | 35.0% |
| !!! | TTTGATCTTGGTGGGTTTTA+AGG | - | chr5_1:36155318-36155337 | Msa0729290:three_prime_UTR | 35.0% |
| ACACTCACTGTTAAACAAGT+AGG | + | chr5_1:36155891-36155910 | None:intergenic | 35.0% | |
| CTTCAATGGTACCAACAAAA+TGG | + | chr5_1:36155944-36155963 | None:intergenic | 35.0% | |
| ! | CATTTTGTTGGTACCATTGA+AGG | - | chr5_1:36155942-36155961 | Msa0729290:three_prime_UTR | 35.0% |
| GGCAAAAAAACATCCTTCAA+TGG | + | chr5_1:36155958-36155977 | None:intergenic | 35.0% | |
| AATGAGCTAATGGAGTCTAA+AGG | - | chr5_1:36156057-36156076 | Msa0729290:three_prime_UTR | 35.0% | |
| ATTGAAGACATTCGTCCTAA+CGG | - | chr5_1:36156153-36156172 | Msa0729290:three_prime_UTR | 35.0% | |
| ATCAGTATGGAATATCAGGA+TGG | + | chr5_1:36156323-36156342 | None:intergenic | 35.0% | |
| GAGAATCAGTATGGAATATC+AGG | + | chr5_1:36156327-36156346 | None:intergenic | 35.0% | |
| TAAAAAACTGCTTGCATGCA+GGG | + | chr5_1:36156354-36156373 | None:intergenic | 35.0% | |
| ATAAAAAACTGCTTGCATGC+AGG | + | chr5_1:36156355-36156374 | None:intergenic | 35.0% | |
| AAAGACACACAGAAGAAACA+AGG | + | chr5_1:36156473-36156492 | None:intergenic | 35.0% | |
| !!! | GTTTCTGCAATTGGTTTTGA+AGG | - | chr5_1:36156516-36156535 | Msa0729290:three_prime_UTR | 35.0% |
| TGAAGGATTTGAAAAGAGGT+TGG | - | chr5_1:36156533-36156552 | Msa0729290:three_prime_UTR | 35.0% | |
| AATCCCACCCATATTGAAAT+TGG | - | chr5_1:36156782-36156801 | Msa0729290:intron | 35.0% | |
| ! | AGATCTGACTTTAAGGGAAA+TGG | + | chr5_1:36156814-36156833 | None:intergenic | 35.0% |
| AGAGTAAACATGCCAATTCT+GGG | + | chr5_1:36156985-36157004 | None:intergenic | 35.0% | |
| !! | GACTTTGATTTTGAACCTTG+TGG | - | chr5_1:36157176-36157195 | Msa0729290:intron | 35.0% |
| !! | ATCTTCTGGAGTAACATGAA+TGG | + | chr5_1:36157240-36157259 | None:intergenic | 35.0% |
| ATTCATGTTACTCCAGAAGA+TGG | - | chr5_1:36157239-36157258 | Msa0729290:intron | 35.0% | |
| TTCATGTTACTCCAGAAGAT+GGG | - | chr5_1:36157240-36157259 | Msa0729290:intron | 35.0% | |
| CTACAGAAAACTCATTTGGT+TGG | + | chr5_1:36157352-36157371 | None:intergenic | 35.0% | |
| ACAGCTACAGAAAACTCATT+TGG | + | chr5_1:36157356-36157375 | None:intergenic | 35.0% | |
| ! | TAAATAAGTGTCGCCTATTC+AGG | - | chr5_1:36157611-36157630 | Msa0729290:intron | 35.0% |
| ! | TGATGATGAGAGACATGTTT+CGG | - | chr5_1:36157857-36157876 | Msa0729290:five_prime_UTR | 35.0% |
| GTTTACTTGATAGAGTTGCA+TGG | + | chr5_1:36157889-36157908 | None:intergenic | 35.0% | |
| GAGGAAAACGCTTACAGATA+CGG | + | chr5_1:36155211-36155230 | None:intergenic | 40.0% | |
| ATAACAAAAACGGAAGGAGG+AGG | + | chr5_1:36155230-36155249 | None:intergenic | 40.0% | |
| ACGATAACAAAAACGGAAGG+AGG | + | chr5_1:36155233-36155252 | None:intergenic | 40.0% | |
| TGTACTCGATCTAATGTGCA+TGG | - | chr5_1:36155563-36155582 | Msa0729290:three_prime_UTR | 40.0% | |
| TTCCAACAAACAATCCTGGT+AGG | + | chr5_1:36155633-36155652 | None:intergenic | 40.0% | |
| TGAGTGTGCAAATCCTTGAT+GGG | - | chr5_1:36155904-36155923 | Msa0729290:three_prime_UTR | 40.0% | |
| AACAGGACTGAATGAGCTAA+TGG | - | chr5_1:36156047-36156066 | Msa0729290:three_prime_UTR | 40.0% | |
| AACTTCTTGATTCCACCGTT+AGG | + | chr5_1:36156171-36156190 | None:intergenic | 40.0% | |
| AGGTGAATGAACACTTACGT+TGG | + | chr5_1:36156211-36156230 | None:intergenic | 40.0% | |
| AAAAAACTGCTTGCATGCAG+GGG | + | chr5_1:36156353-36156372 | None:intergenic | 40.0% | |
| AGAGTACAATCGCAAAGAGA+GGG | + | chr5_1:36156440-36156459 | None:intergenic | 40.0% | |
| ! | AAGAGTACAATCGCAAAGAG+AGG | + | chr5_1:36156441-36156460 | None:intergenic | 40.0% |
| GTGTCTTTCTGTTTGAACTG+TGG | - | chr5_1:36156485-36156504 | Msa0729290:three_prime_UTR | 40.0% | |
| ATCTCTCACAAAATCCCAAC+TGG | - | chr5_1:36156611-36156630 | Msa0729290:three_prime_UTR | 40.0% | |
| TGCAAGAATCTCATCCAGTT+GGG | + | chr5_1:36156628-36156647 | None:intergenic | 40.0% | |
| ! | GTCAACATCGTCATTTGCTA+AGG | + | chr5_1:36156676-36156695 | None:intergenic | 40.0% |
| GTAGGCATAAACAAAAAGGC+TGG | + | chr5_1:36156718-36156737 | None:intergenic | 40.0% | |
| ! | CAGTAATTTGGTAGTACCAC+AGG | + | chr5_1:36156757-36156776 | None:intergenic | 40.0% |
| TGGGATTGCAAGCAGTAATT+TGG | + | chr5_1:36156769-36156788 | None:intergenic | 40.0% | |
| GACTCGGCCAATTTCAATAT+GGG | + | chr5_1:36156792-36156811 | None:intergenic | 40.0% | |
| ! | GACTTTAAGGGAAATGGACT+CGG | + | chr5_1:36156808-36156827 | None:intergenic | 40.0% |
| CCTCACAGATCTGACTTTAA+GGG | + | chr5_1:36156820-36156839 | None:intergenic | 40.0% | |
| ACCTCACAGATCTGACTTTA+AGG | + | chr5_1:36156821-36156840 | None:intergenic | 40.0% | |
| AGGAAAAATGAAACTGCCTC+GGG | + | chr5_1:36156847-36156866 | None:intergenic | 40.0% | |
| CAGGAAAAATGAAACTGCCT+CGG | + | chr5_1:36156848-36156867 | None:intergenic | 40.0% | |
| ATCAAGGACAGCTACTTCTT+CGG | + | chr5_1:36156901-36156920 | None:intergenic | 40.0% | |
| ! | ATGGCTACTTTGGAAAGCTT+GGG | - | chr5_1:36156919-36156938 | Msa0729290:CDS | 40.0% |
| CAGAGTAAACATGCCAATTC+TGG | + | chr5_1:36156986-36157005 | None:intergenic | 40.0% | |
| ! | CTTAGACAGAGAGAAAGCAT+TGG | - | chr5_1:36157067-36157086 | Msa0729290:intron | 40.0% |
| !! | TCTGAATGAATTGGTGGTGA+AGG | - | chr5_1:36157313-36157332 | Msa0729290:intron | 40.0% |
| ! | GTTTTCTGTAGCTGTTCATG+TGG | - | chr5_1:36157361-36157380 | Msa0729290:intron | 40.0% |
| !! | CAGCACTTAAGTGTTGATCT+AGG | + | chr5_1:36157527-36157546 | None:intergenic | 40.0% |
| CTAGATCAACACTTAAGTGC+TGG | - | chr5_1:36157525-36157544 | Msa0729290:intron | 40.0% | |
| ! | AGGCGTGAACTCATTGTTTT+CGG | - | chr5_1:36157631-36157650 | Msa0729290:intron | 40.0% |
| !!! | GATGGGTGGTTAGTTTTACA+AGG | + | chr5_1:36157913-36157932 | None:intergenic | 40.0% |
| TTACAGATACGGAGTGGGAA+GGG | + | chr5_1:36155200-36155219 | None:intergenic | 45.0% | |
| AACGCTTACAGATACGGAGT+GGG | + | chr5_1:36155205-36155224 | None:intergenic | 45.0% | |
| AAACGCTTACAGATACGGAG+TGG | + | chr5_1:36155206-36155225 | None:intergenic | 45.0% | |
| ! | ATGATTATCTGGGACCTACC+AGG | - | chr5_1:36155616-36155635 | Msa0729290:three_prime_UTR | 45.0% |
| GACCTACCAGGATTGTTTGT+TGG | - | chr5_1:36155628-36155647 | Msa0729290:three_prime_UTR | 45.0% | |
| GTGAGTGTGCAAATCCTTGA+TGG | - | chr5_1:36155903-36155922 | Msa0729290:three_prime_UTR | 45.0% | |
| GAGCTAATGGAGTCTAAAGG+AGG | - | chr5_1:36156060-36156079 | Msa0729290:three_prime_UTR | 45.0% | |
| TTATTCTACGAAGCTCCCCT+CGG | - | chr5_1:36156123-36156142 | Msa0729290:three_prime_UTR | 45.0% | |
| TCTTCAATGCTGTATCCGAG+GGG | + | chr5_1:36156141-36156160 | None:intergenic | 45.0% | |
| GTCTTCAATGCTGTATCCGA+GGG | + | chr5_1:36156142-36156161 | None:intergenic | 45.0% | |
| TGTCTTCAATGCTGTATCCG+AGG | + | chr5_1:36156143-36156162 | None:intergenic | 45.0% | |
| ACAATCGCAAAGAGAGGGTT+TGG | + | chr5_1:36156435-36156454 | None:intergenic | 45.0% | |
| TTCTGTTTGAACTGTGGCCA+TGG | - | chr5_1:36156491-36156510 | Msa0729290:three_prime_UTR | 45.0% | |
| ACCAATTGCAGAAACTGCCA+TGG | + | chr5_1:36156511-36156530 | None:intergenic | 45.0% | |
| ! | GAAATTTCCTTTTCCGACCC+TGG | - | chr5_1:36156555-36156574 | Msa0729290:three_prime_UTR | 45.0% |
| AAAAAGTCCAGGGTCGGAAA+AGG | + | chr5_1:36156565-36156584 | None:intergenic | 45.0% | |
| GTCAGAAAAAAGTCCAGGGT+CGG | + | chr5_1:36156571-36156590 | None:intergenic | 45.0% | |
| GAGGGTCAGAAAAAAGTCCA+GGG | + | chr5_1:36156575-36156594 | None:intergenic | 45.0% | |
| TGAGGGTCAGAAAAAAGTCC+AGG | + | chr5_1:36156576-36156595 | None:intergenic | 45.0% | |
| !!! | GGACTTTTTTCTGACCCTCA+CGG | - | chr5_1:36156576-36156595 | Msa0729290:three_prime_UTR | 45.0% |
| !!! | GACTTTTTTCTGACCCTCAC+GGG | - | chr5_1:36156577-36156596 | Msa0729290:three_prime_UTR | 45.0% |
| GTGCAAGAATCTCATCCAGT+TGG | + | chr5_1:36156629-36156648 | None:intergenic | 45.0% | |
| CGGCCAATTTCAATATGGGT+GGG | + | chr5_1:36156788-36156807 | None:intergenic | 45.0% | |
| TCGGCCAATTTCAATATGGG+TGG | + | chr5_1:36156789-36156808 | None:intergenic | 45.0% | |
| GGACTCGGCCAATTTCAATA+TGG | + | chr5_1:36156793-36156812 | None:intergenic | 45.0% | |
| CCCTTAAAGTCAGATCTGTG+AGG | - | chr5_1:36156817-36156836 | Msa0729290:intron | 45.0% | |
| !! | CGAGGCAGTTTCATTTTTCC+TGG | - | chr5_1:36156846-36156865 | Msa0729290:intron | 45.0% |
| CAGCTACTTCTTCGGAAAAG+TGG | + | chr5_1:36156893-36156912 | None:intergenic | 45.0% | |
| GAAGAAGTAGCTGTCCTTGA+TGG | - | chr5_1:36156900-36156919 | Msa0729290:CDS | 45.0% | |
| GCTTTCCAAAGTAGCCATCA+AGG | + | chr5_1:36156917-36156936 | None:intergenic | 45.0% | |
| ! | GATGGCTACTTTGGAAAGCT+TGG | - | chr5_1:36156918-36156937 | Msa0729290:CDS | 45.0% |
| ! | TACTTTGGAAAGCTTGGGTC+AGG | - | chr5_1:36156924-36156943 | Msa0729290:CDS | 45.0% |
| AGGCAGCACGGCTTATATTA+TGG | - | chr5_1:36156944-36156963 | Msa0729290:CDS | 45.0% | |
| GGCAGCACGGCTTATATTAT+GGG | - | chr5_1:36156945-36156964 | Msa0729290:CDS | 45.0% | |
| AGCACGGCTTATATTATGGG+TGG | - | chr5_1:36156948-36156967 | Msa0729290:CDS | 45.0% | |
| ATGCCAATTCTGGGCTTCAT+CGG | + | chr5_1:36156976-36156995 | None:intergenic | 45.0% | |
| GTGTGTAGACAGAGTCGTTT+GGG | + | chr5_1:36157028-36157047 | None:intergenic | 45.0% | |
| AGTGTGTAGACAGAGTCGTT+TGG | + | chr5_1:36157029-36157048 | None:intergenic | 45.0% | |
| TGCTTTCTCTCTGTCTAAGC+CGG | + | chr5_1:36157066-36157085 | None:intergenic | 45.0% | |
| TTTCCTGATGCCAGAGTTCA+CGG | + | chr5_1:36157132-36157151 | None:intergenic | 45.0% | |
| GCATAACTGAACCCATCTTC+TGG | + | chr5_1:36157254-36157273 | None:intergenic | 45.0% | |
| !! | TATGCAAGCTTTGAGACTGC+TGG | - | chr5_1:36157269-36157288 | Msa0729290:intron | 45.0% |
| GGTTGTTCGCTGGATGTTAA+GGG | - | chr5_1:36157410-36157429 | Msa0729290:intron | 45.0% | |
| ! | CGGCAGTCTTGACAAACTTT+TGG | + | chr5_1:36157493-36157512 | None:intergenic | 45.0% |
| CAATGAGTTCACGCCTGAAT+AGG | + | chr5_1:36157627-36157646 | None:intergenic | 45.0% | |
| ! | CACTGCTGTTTATGTGTCGA+AGG | - | chr5_1:36157677-36157696 | Msa0729290:intron | 45.0% |
| !!! | TATATAATTATTTTATAACA+TGG | - | chr5_1:36155794-36155813 | Msa0729290:three_prime_UTR | 5.0% |
| AAAGCGCGGAGAAAACGAGA+CGG | + | chr5_1:36155177-36155196 | None:intergenic | 50.0% | |
| CTTACAGATACGGAGTGGGA+AGG | + | chr5_1:36155201-36155220 | None:intergenic | 50.0% | |
| GAAGACATTCGTCCTAACGG+TGG | - | chr5_1:36156156-36156175 | Msa0729290:three_prime_UTR | 50.0% | |
| CAGGGGAACGAGAATCAGTA+TGG | + | chr5_1:36156336-36156355 | None:intergenic | 50.0% | |
| GCCATGGCAGTTTCTGCAAT+TGG | - | chr5_1:36156507-36156526 | Msa0729290:three_prime_UTR | 50.0% | |
| !!! | TTTTTTCTGACCCTCACGGG+AGG | - | chr5_1:36156580-36156599 | Msa0729290:three_prime_UTR | 50.0% |
| ! | TTTTTCTGACCCTCACGGGA+GGG | - | chr5_1:36156581-36156600 | Msa0729290:three_prime_UTR | 50.0% |
| ATCTTAAACCCCTCCCGTGA+GGG | + | chr5_1:36156593-36156612 | None:intergenic | 50.0% | |
| GAAACAATGGTGCACTCAGC+TGG | + | chr5_1:36156651-36156670 | None:intergenic | 50.0% | |
| GCTGGACTCAGACAGAACAT+AGG | + | chr5_1:36156700-36156719 | None:intergenic | 50.0% | |
| CTTCGGAAAAGTGGCGATGA+GGG | + | chr5_1:36156884-36156903 | None:intergenic | 50.0% | |
| TCTTCGGAAAAGTGGCGATG+AGG | + | chr5_1:36156885-36156904 | None:intergenic | 50.0% | |
| ! | GCTGTCCTTGATGGCTACTT+TGG | - | chr5_1:36156909-36156928 | Msa0729290:CDS | 50.0% |
| GATCCGATGAAGCCCAGAAT+TGG | - | chr5_1:36156970-36156989 | Msa0729290:CDS | 50.0% | |
| ACACTCGAGATGTGCATGAC+CGG | - | chr5_1:36157044-36157063 | Msa0729290:intron | 50.0% | |
| TGCAAGCAAGTCGTTTGAGC+AGG | - | chr5_1:36157388-36157407 | Msa0729290:intron | 50.0% | |
| GCAAGCAAGTCGTTTGAGCA+GGG | - | chr5_1:36157389-36157408 | Msa0729290:intron | 50.0% | |
| GGGTTGTTCGCTGGATGTTA+AGG | - | chr5_1:36157409-36157428 | Msa0729290:intron | 50.0% | |
| AGGGATACTGTCGTGAAGAG+AGG | - | chr5_1:36157429-36157448 | Msa0729290:intron | 50.0% | |
| GTGAAGAGAGGAGCCTAGAA+GGG | - | chr5_1:36157441-36157460 | Msa0729290:intron | 50.0% | |
| AGCCTAGAAGGGCTTGGAAT+GGG | - | chr5_1:36157452-36157471 | Msa0729290:intron | 50.0% | |
| ! | TTTGTCAAGACTGCCGACTG+TGG | - | chr5_1:36157497-36157516 | Msa0729290:intron | 50.0% |
| ! | TTTTCTGACCCTCACGGGAG+GGG | - | chr5_1:36156582-36156601 | Msa0729290:three_prime_UTR | 55.0% |
| GATCTTAAACCCCTCCCGTG+AGG | + | chr5_1:36156594-36156613 | None:intergenic | 55.0% | |
| AGATCTGTGAGGTACACCCG+AGG | - | chr5_1:36156828-36156847 | Msa0729290:intron | 55.0% | |
| GTGGCGATGAGGGAAAGACT+GGG | + | chr5_1:36156874-36156893 | None:intergenic | 55.0% | |
| AGTGGCGATGAGGGAAAGAC+TGG | + | chr5_1:36156875-36156894 | None:intergenic | 55.0% | |
| AAAGCTTGGGTCAGGCAGCA+CGG | - | chr5_1:36156932-36156951 | Msa0729290:CDS | 55.0% | |
| GACAGAGTCGTTTGGGCTCA+CGG | + | chr5_1:36157021-36157040 | None:intergenic | 55.0% | |
| GCCAAGATGACCGTGAACTC+TGG | - | chr5_1:36157119-36157138 | Msa0729290:intron | 55.0% | |
| GCCAGAGTTCACGGTCATCT+TGG | + | chr5_1:36157123-36157142 | None:intergenic | 55.0% | |
| TGACCGTGAACTCTGGCATC+AGG | - | chr5_1:36157126-36157145 | Msa0729290:intron | 55.0% | |
| GTTTGAGCAGGGTTGTTCGC+TGG | - | chr5_1:36157400-36157419 | Msa0729290:intron | 55.0% | |
| CGTGAAGAGAGGAGCCTAGA+AGG | - | chr5_1:36157440-36157459 | Msa0729290:intron | 55.0% | |
| GAGCCTAGAAGGGCTTGGAA+TGG | - | chr5_1:36157451-36157470 | Msa0729290:intron | 55.0% | |
| CACCCATTCCAAGCCCTTCT+AGG | + | chr5_1:36157457-36157476 | None:intergenic | 55.0% | |
| CTAGAAGGGCTTGGAATGGG+TGG | - | chr5_1:36157455-36157474 | Msa0729290:intron | 55.0% | |
| TGATCTAGGCGAGCCACAGT+CGG | + | chr5_1:36157513-36157532 | None:intergenic | 55.0% | |
| TGAGGGAAAGACTGGGCACC+AGG | + | chr5_1:36156867-36156886 | None:intergenic | 60.0% | |
| TGGGCTCACGGAATCTGCAG+AGG | + | chr5_1:36157009-36157028 | None:intergenic | 60.0% | |
| GAGAGGAGCCTAGAAGGGCT+TGG | - | chr5_1:36157446-36157465 | Msa0729290:intron | 60.0% | |
| CGGAGTGGGAAGGGAAAGCG+CGG | + | chr5_1:36155191-36155210 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 36155106 | 36157963 | 36155106 | ID=Msa0729290;Name=Msa0729290 |
| chr5_1 | mRNA | 36155106 | 36157963 | 36155106 | ID=Msa0729290-mRNA-1;Parent=Msa0729290;Name=Msa0729290-mRNA-1;_AED=0.02;_eAED=0.02;_QI=200|1|1|1|0.33|0.5|4|1635|55 |
| chr5_1 | exon | 36155106 | 36156761 | 36155106 | ID=Msa0729290-mRNA-1:exon:11102;Parent=Msa0729290-mRNA-1 |
| chr5_1 | exon | 36156857 | 36157017 | 36156857 | ID=Msa0729290-mRNA-1:exon:11101;Parent=Msa0729290-mRNA-1 |
| chr5_1 | exon | 36157687 | 36157762 | 36157687 | ID=Msa0729290-mRNA-1:exon:11100;Parent=Msa0729290-mRNA-1 |
| chr5_1 | exon | 36157854 | 36157963 | 36157854 | ID=Msa0729290-mRNA-1:exon:11099;Parent=Msa0729290-mRNA-1 |
| chr5_1 | five_prime_UTR | 36157854 | 36157963 | 36157854 | ID=Msa0729290-mRNA-1:five_prime_utr;Parent=Msa0729290-mRNA-1 |
| chr5_1 | five_prime_UTR | 36157687 | 36157762 | 36157687 | ID=Msa0729290-mRNA-1:five_prime_utr;Parent=Msa0729290-mRNA-1 |
| chr5_1 | five_prime_UTR | 36157004 | 36157017 | 36157004 | ID=Msa0729290-mRNA-1:five_prime_utr;Parent=Msa0729290-mRNA-1 |
| chr5_1 | CDS | 36156857 | 36157003 | 36156857 | ID=Msa0729290-mRNA-1:cds;Parent=Msa0729290-mRNA-1 |
| chr5_1 | CDS | 36156741 | 36156761 | 36156741 | ID=Msa0729290-mRNA-1:cds;Parent=Msa0729290-mRNA-1 |
| chr5_1 | three_prime_UTR | 36155106 | 36156740 | 36155106 | ID=Msa0729290-mRNA-1:three_prime_utr;Parent=Msa0729290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
