Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0376450 | KEH35467.1 | 99.770 | 869 | 2 | 0 | 1 | 869 | 1 | 869 | 0.0 | 1792 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0376450 | sp|Q9FJD4|IMB1_ARATH | 79.517 | 869 | 177 | 1 | 1 | 869 | 3 | 870 | 0.0 | 1437 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0376450 | A0A072V0X7 | 99.770 | 869 | 2 | 0 | 1 | 869 | 1 | 869 | 0.0 | 1792 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012240 | Msa0376450 | -0.809478 | 1.855108e-50 | -8.615850e-47 |
| Msa0033160 | Msa0376450 | 0.818660 | 1.745960e-52 | -8.615850e-47 |
| Msa0049650 | Msa0376450 | 0.832985 | 6.916223e-56 | -8.615850e-47 |
| Msa0054730 | Msa0376450 | 0.828145 | 1.058083e-54 | -8.615850e-47 |
| Msa0054780 | Msa0376450 | -0.801319 | 9.521858e-49 | -8.615850e-47 |
| Msa0058210 | Msa0376450 | 0.879995 | 7.898849e-70 | -8.615850e-47 |
| Msa0058390 | Msa0376450 | 0.846865 | 1.660213e-59 | -8.615850e-47 |
| Msa0074900 | Msa0376450 | 0.821247 | 4.469854e-53 | -8.615850e-47 |
| Msa0090770 | Msa0376450 | 0.834369 | 3.119507e-56 | -8.615850e-47 |
| Msa0138390 | Msa0376450 | 0.800914 | 1.152540e-48 | -8.615850e-47 |
| Msa0138560 | Msa0376450 | 0.868607 | 5.757676e-66 | -8.615850e-47 |
| Msa0140650 | Msa0376450 | -0.800912 | 1.153791e-48 | -8.615850e-47 |
| Msa0167210 | Msa0376450 | 0.836038 | 1.182833e-56 | -8.615850e-47 |
| Msa0173830 | Msa0376450 | -0.805410 | 1.352848e-49 | -8.615850e-47 |
| Msa0183640 | Msa0376450 | 0.861451 | 1.016655e-63 | -8.615850e-47 |
| Msa0196360 | Msa0376450 | 0.803144 | 4.009843e-49 | -8.615850e-47 |
| Msa0200010 | Msa0376450 | -0.810073 | 1.381960e-50 | -8.615850e-47 |
| Msa0238070 | Msa0376450 | 0.820422 | 6.918744e-53 | -8.615850e-47 |
| Msa0376450 | Msa0377970 | 0.813374 | 2.644264e-51 | -8.615850e-47 |
| Msa0376450 | Msa0378490 | -0.817548 | 3.114462e-52 | -8.615850e-47 |
| Msa0376450 | Msa0419310 | -0.889303 | 2.734211e-73 | -8.615850e-47 |
| Msa0376450 | Msa0425120 | 0.972031 | 4.160540e-134 | -8.615850e-47 |
| Msa0376450 | Msa0427620 | 0.801285 | 9.675718e-49 | -8.615850e-47 |
| Msa0376450 | Msa0430620 | -0.819743 | 9.895337e-53 | -8.615850e-47 |
| Msa0376450 | Msa0465790 | -0.807334 | 5.318060e-50 | -8.615850e-47 |
| Msa0376450 | Msa0471720 | 0.999160 | 2.410619e-293 | -8.615850e-47 |
| Msa0376450 | Msa0472740 | -0.800612 | 1.328452e-48 | -8.615850e-47 |
| Msa0376450 | Msa0510350 | -0.802957 | 4.384612e-49 | -8.615850e-47 |
| Msa0376450 | Msa0516510 | 0.996200 | 1.374163e-224 | -8.615850e-47 |
| Msa0376450 | Msa0518130 | 0.813593 | 2.366583e-51 | -8.615850e-47 |
| Msa0376450 | Msa0553220 | 0.806806 | 6.879841e-50 | -8.615850e-47 |
| Msa0376450 | Msa0607340 | 0.865694 | 4.903648e-65 | -8.615850e-47 |
| Msa0376450 | Msa0647450 | 0.802778 | 4.773897e-49 | -8.615850e-47 |
| Msa0376450 | Msa0654760 | 0.805861 | 1.088049e-49 | -8.615850e-47 |
| Msa0376450 | Msa0661190 | 0.814503 | 1.490148e-51 | -8.615850e-47 |
| Msa0376450 | Msa0717920 | 0.831354 | 1.750945e-55 | -8.615850e-47 |
| Msa0376450 | Msa0729290 | 0.801458 | 8.919614e-49 | -8.615850e-47 |
| Msa0376450 | Msa0738630 | 0.826150 | 3.177398e-54 | -8.615850e-47 |
| Msa0376450 | Msa0783760 | 0.834696 | 2.581152e-56 | -8.615850e-47 |
| Msa0376450 | Msa0813320 | 0.804889 | 1.739476e-49 | -8.615850e-47 |
| Msa0376450 | Msa0813720 | -0.805732 | 1.158058e-49 | -8.615850e-47 |
| Msa0376450 | Msa0818980 | 0.824680 | 7.079809e-54 | -8.615850e-47 |
| Msa0376450 | Msa0819030 | 0.816064 | 6.704631e-52 | -8.615850e-47 |
| Msa0376450 | Msa0849510 | -0.820714 | 5.929079e-53 | -8.615850e-47 |
| Msa0376450 | Msa0867050 | 0.833224 | 6.029977e-56 | -8.615850e-47 |
| Msa0376450 | Msa0967650 | 0.999438 | 1.084688e-311 | -8.615850e-47 |
| Msa0376450 | Msa1040110 | 0.834034 | 3.785045e-56 | -8.615850e-47 |
| Msa0376450 | Msa1072460 | 0.820332 | 7.253295e-53 | -8.615850e-47 |
| Msa0376450 | Msa1098180 | 0.810749 | 9.874149e-51 | -8.615850e-47 |
| Msa0376450 | Msa1119250 | 0.826403 | 2.765742e-54 | -8.615850e-47 |
| Msa0376450 | Msa1119300 | 0.842130 | 3.121004e-58 | -8.615850e-47 |
| Msa0376450 | Msa1138240 | 0.810706 | 1.008697e-50 | -8.615850e-47 |
| Msa0376450 | Msa1200880 | 0.812973 | 3.237424e-51 | -8.615850e-47 |
| Msa0376450 | Msa1215570 | 0.816704 | 4.821774e-52 | -8.615850e-47 |
| Msa0376450 | Msa1245540 | -0.802178 | 6.345993e-49 | -8.615850e-47 |
| Msa0376450 | Msa1254370 | 0.800078 | 1.706367e-48 | -8.615850e-47 |
| Msa0376450 | Msa1260130 | -0.821190 | 4.606380e-53 | -8.615850e-47 |
| Msa0376450 | Msa1279490 | 0.801756 | 7.746993e-49 | -8.615850e-47 |
| Msa0376450 | Msa1307010 | 0.822299 | 2.550962e-53 | -8.615850e-47 |
| Msa0376450 | Msa1307660 | 0.840439 | 8.687879e-58 | -8.615850e-47 |
| Msa0376450 | Msa1336950 | -0.820731 | 5.875844e-53 | -8.615850e-47 |
| Msa0376450 | Msa1351640 | 0.819914 | 9.041117e-53 | -8.615850e-47 |
| Msa0376450 | Msa1358610 | 0.838618 | 2.583594e-57 | -8.615850e-47 |
| Msa0376450 | Msa1361100 | -0.801871 | 7.338947e-49 | -8.615850e-47 |
| Msa0376450 | Msa1365700 | 0.839643 | 1.401234e-57 | -8.615850e-47 |
| Msa0376450 | Msa1375060 | 0.815735 | 7.938067e-52 | -8.615850e-47 |
| Msa0376450 | Msa1384820 | 0.876653 | 1.177175e-68 | -8.615850e-47 |
| Msa0376450 | Msa1385770 | -0.812234 | 4.697764e-51 | -8.615850e-47 |
| Msa0376450 | Msa1392330 | 0.816849 | 4.474237e-52 | -8.615850e-47 |
| Msa0376450 | Msa1396750 | 0.838821 | 2.289902e-57 | -8.615850e-47 |
| Msa0376450 | Msa1403680 | -0.827979 | 1.159577e-54 | -8.615850e-47 |
| Msa0376450 | Msa1409240 | -0.810958 | 8.897128e-51 | -8.615850e-47 |
| Msa0376450 | Msa1410430 | 0.837476 | 5.082918e-57 | -8.615850e-47 |
| Msa0376450 | Msa1423580 | 0.804065 | 2.583126e-49 | -8.615850e-47 |
| Msa0376450 | Msa1434140 | -0.801886 | 7.286140e-49 | -8.615850e-47 |
| Msa0376450 | Msa1442160 | 0.839222 | 1.803393e-57 | -8.615850e-47 |
| Msa0376450 | Msa1449250 | 0.816952 | 4.241664e-52 | -8.615850e-47 |
| Msa0376450 | Msa1452090 | 0.847159 | 1.379721e-59 | -8.615850e-47 |
| Msa0376450 | Msa1453780 | 0.868947 | 4.468955e-66 | -8.615850e-47 |
| Msa0376450 | Msa1460630 | -0.804244 | 2.370985e-49 | -8.615850e-47 |
| Msa0376450 | Msa1460820 | 0.815945 | 7.125337e-52 | -8.615850e-47 |
| Msa0259860 | Msa0376450 | 0.808831 | 2.552959e-50 | -8.615850e-47 |
| Msa0260950 | Msa0376450 | 0.817105 | 3.917577e-52 | -8.615850e-47 |
| Msa0267310 | Msa0376450 | -0.817793 | 2.742745e-52 | -8.615850e-47 |
| Msa0267970 | Msa0376450 | -0.814915 | 1.207829e-51 | -8.615850e-47 |
| Msa0270030 | Msa0376450 | 0.823461 | 1.368304e-53 | -8.615850e-47 |
| Msa0280730 | Msa0376450 | -0.805416 | 1.348857e-49 | -8.615850e-47 |
| Msa0288420 | Msa0376450 | 0.814960 | 1.180786e-51 | -8.615850e-47 |
| Msa0315930 | Msa0376450 | 0.852995 | 3.201045e-61 | -8.615850e-47 |
| Msa0318250 | Msa0376450 | -0.809662 | 1.693918e-50 | -8.615850e-47 |
| Msa0352330 | Msa0376450 | -0.823451 | 1.375746e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0376450 | MtrunA17_Chr3g0127121 | 99.770 | 869 | 2 | 0 | 1 | 869 | 1 | 869 | 0.0 | 1792 |
| Msa0376450 | MtrunA17_Chr3g0127101 | 90.679 | 869 | 80 | 1 | 1 | 869 | 1 | 868 | 0.0 | 1591 |
| Msa0376450 | MtrunA17_Chr8g0388661 | 77.995 | 868 | 188 | 2 | 1 | 867 | 3 | 868 | 0.0 | 1427 |
| Msa0376450 | MtrunA17_Chr1g0178291 | 32.517 | 449 | 240 | 15 | 127 | 536 | 3 | 427 | 7.28e-40 | 156 |
| Msa0376450 | MtrunA17_Chr1g0211341 | 23.726 | 628 | 342 | 26 | 29 | 590 | 45 | 601 | 7.13e-21 | 98.6 |
| Msa0376450 | MtrunA17_Chr2g0277681 | 22.260 | 584 | 367 | 20 | 14 | 578 | 16 | 531 | 1.03e-12 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0376450 | AT5G53480.1 | 79.517 | 869 | 177 | 1 | 1 | 869 | 3 | 870 | 0.0 | 1437 |
| Msa0376450 | AT3G08947.1 | 57.099 | 655 | 276 | 5 | 213 | 865 | 1 | 652 | 0.0 | 747 |
| Msa0376450 | AT3G08947.2 | 59.386 | 586 | 233 | 5 | 213 | 796 | 1 | 583 | 0.0 | 700 |
| Msa0376450 | AT2G16950.2 | 24.503 | 604 | 331 | 23 | 46 | 590 | 61 | 598 | 1.27e-26 | 117 |
| Msa0376450 | AT2G16950.1 | 24.507 | 608 | 330 | 24 | 46 | 590 | 61 | 602 | 8.00e-26 | 115 |
Find 255 sgRNAs with CRISPR-Local
Find 352 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTTCTTGGTCTCTCTTTC+TGG | -0.012550 | 3_1:+76568989 | Msa0376450:CDS |
| CAGATCTCTTCTCCGATTTC+AGG | 0.165331 | 3_1:+76567501 | Msa0376450:five_prime_UTR |
| CTTGAACGTACTGGACTTAA+TGG | 0.190615 | 3_1:-76571781 | None:intergenic |
| CTCTCCAAGCCATTGAATTC+TGG | 0.197925 | 3_1:+76569710 | Msa0376450:CDS |
| AGAAAGTCTTCGGCAATTTC+AGG | 0.216352 | 3_1:+76568952 | Msa0376450:CDS |
| CTTGAAAGTACTGGACTTAA+TGG | 0.254879 | 3_1:-76571831 | None:intergenic |
| TGACAAAGACTGTTGAATTA+AGG | 0.267917 | 3_1:-76571465 | None:intergenic |
| GGGATATTAGAGGCATATTC+TGG | 0.268252 | 3_1:+76571173 | Msa0376450:CDS |
| GCATTTCCCTCATTAATAAT+AGG | 0.268484 | 3_1:-76570225 | None:intergenic |
| GACACCACTGCTTGGACTTT+GGG | 0.272684 | 3_1:+76570162 | Msa0376450:CDS |
| GCAAAACCTTCCTGGTTTCT+TGG | 0.279761 | 3_1:+76568976 | Msa0376450:CDS |
| CAGCCTTTCTCAGCAACATT+AGG | 0.287721 | 3_1:-76570291 | None:intergenic |
| TCCCCACATTCTCCAGTTCT+TGG | 0.294606 | 3_1:+76571250 | Msa0376450:CDS |
| ACTAGAGCACTGAGCATAAA+TGG | 0.300642 | 3_1:-76570114 | None:intergenic |
| CAAGTTGTTGCTAAAATTGC+TGG | 0.301501 | 3_1:+76569220 | Msa0376450:CDS |
| GTTTCTTGGTCTCTCTTTCT+GGG | 0.305155 | 3_1:+76568990 | Msa0376450:CDS |
| TACATTAACTCTTTGAGAAA+TGG | 0.314718 | 3_1:+76571152 | Msa0376450:CDS |
| GGCAGGTATTTAGCAAAATC+AGG | 0.324114 | 3_1:-76570798 | None:intergenic |
| ATACTGCAAGAGAACATATT+TGG | 0.329593 | 3_1:-76570670 | None:intergenic |
| TCAAGAAACTTGTAAAATTC+AGG | 0.332719 | 3_1:-76570819 | None:intergenic |
| AGACACCACTGCTTGGACTT+TGG | 0.341617 | 3_1:+76570161 | Msa0376450:CDS |
| AACTTATAGGCCTTCTTTGT+GGG | 0.345240 | 3_1:+76570604 | Msa0376450:CDS |
| GCTTCCCTCTGTCTCCAATC+TGG | 0.354117 | 3_1:-76570015 | None:intergenic |
| GCAGTATGCTGATCAGATAA+TGG | 0.356944 | 3_1:+76570686 | Msa0376450:CDS |
| TTTCAGGAGCAAAACCTTCC+TGG | 0.362971 | 3_1:+76568968 | Msa0376450:CDS |
| ATAAACTACTTGCATGCATT+TGG | 0.372420 | 3_1:+76571619 | Msa0376450:three_prime_UTR |
| ATTCTTACTGCTGTAGTTCA+AGG | 0.372529 | 3_1:+76569403 | Msa0376450:CDS |
| TTTGAGAAATGGGATATTAG+AGG | 0.373265 | 3_1:+76571163 | Msa0376450:CDS |
| AACAGATATAGCACGATTGA+TGG | 0.383244 | 3_1:-76571564 | None:intergenic |
| GGGTGTGTCGAGGTGGGTCG+TGG | 0.383683 | 3_1:+76571640 | Msa0376450:three_prime_UTR |
| GAAGAAGAGCGAAGGAAGGA+AGG | 0.384641 | 3_1:-76567442 | None:intergenic |
| AACAGATGAAACAGCTCCTT+TGG | 0.387973 | 3_1:+76570491 | Msa0376450:CDS |
| AGCCTTTCTCAGCAACATTA+GGG | 0.389846 | 3_1:-76570290 | None:intergenic |
| TAAACTACTTGCATGCATTT+GGG | 0.392888 | 3_1:+76571620 | Msa0376450:three_prime_UTR |
| GGTTTAGTTGCTCGTACTAC+TGG | 0.395020 | 3_1:+76569940 | Msa0376450:CDS |
| GAACTTATAGGCCTTCTTTG+TGG | 0.395988 | 3_1:+76570603 | Msa0376450:CDS |
| GGAGAACTGTAATAATTTGT+TGG | 0.397331 | 3_1:-76570248 | None:intergenic |
| ACATCACAGCAAAGGCTGTT+AGG | 0.397636 | 3_1:+76569668 | Msa0376450:CDS |
| GTATGCATTTGGCTCTATCT+TGG | 0.398069 | 3_1:+76570044 | Msa0376450:CDS |
| GTATCAAACCTGCCAACTTT+CGG | 0.403548 | 3_1:-76569045 | None:intergenic |
| GCCAACTTTCGGCTATCAAC+TGG | 0.406087 | 3_1:-76569034 | None:intergenic |
| TACTCCAGAATTCAATGGCT+TGG | 0.406106 | 3_1:-76569714 | None:intergenic |
| CCTCTGTCTCCAATCTGGTT+TGG | 0.406779 | 3_1:-76570010 | None:intergenic |
| TGAAAACAGAAAGCGGGAAT+TGG | 0.407494 | 3_1:+76569093 | Msa0376450:CDS |
| TTTCTTCACAGTTCAATTGT+TGG | 0.411323 | 3_1:+76570198 | Msa0376450:CDS |
| TGCAGCGAAGGCCCAGGTTA+AGG | 0.412867 | 3_1:+76569141 | Msa0376450:CDS |
| GCAAGCAACTTTGGAGACTC+TGG | 0.414579 | 3_1:+76569324 | Msa0376450:CDS |
| GAGCATAAGGAATCAAGATC+TGG | 0.417948 | 3_1:-76571229 | None:intergenic |
| GTGTAGTCGGCGACATATGC+AGG | 0.418380 | 3_1:+76570892 | Msa0376450:CDS |
| GAGGAGGCCATGCTAGCTAT+TGG | 0.419964 | 3_1:+76570753 | Msa0376450:CDS |
| ACAAGAGGTACTAATTTGTC+TGG | 0.420575 | 3_1:-76570078 | None:intergenic |
| CTTACGTACAGTTCCGTCAA+TGG | 0.421548 | 3_1:-76568921 | None:intergenic |
| ACATTAACTCTTTGAGAAAT+GGG | 0.422715 | 3_1:+76571153 | Msa0376450:CDS |
| AATAGTGATCCTATCAGTTC+AGG | 0.424523 | 3_1:-76569268 | None:intergenic |
| AGCACGATTGATGGCCAACT+TGG | 0.424564 | 3_1:-76571555 | None:intergenic |
| GAGAACTGTAATAATTTGTT+GGG | 0.427273 | 3_1:-76570247 | None:intergenic |
| TGCACTCGTCCCTCTGCTGT+TGG | 0.428521 | 3_1:+76569837 | Msa0376450:CDS |
| ATGCAAGAGTTAGTGACAAC+TGG | 0.431951 | 3_1:-76571724 | None:intergenic |
| TGTATATGCTATCCAAGAAC+TGG | 0.432522 | 3_1:-76571262 | None:intergenic |
| TGATGAAGAGACTGATATCT+TGG | 0.432783 | 3_1:+76569744 | Msa0376450:CDS |
| CTTCTTCCTCTTGAAAGTAC+TGG | 0.433674 | 3_1:-76571840 | None:intergenic |
| TCAATGGCTTGGAGAGCAAC+AGG | 0.436583 | 3_1:-76569703 | None:intergenic |
| ATGTCAGACTTGCTGCTGCC+AGG | 0.436780 | 3_1:+76569452 | Msa0376450:CDS |
| CAGTATGCTGATCAGATAAT+GGG | 0.437742 | 3_1:+76570687 | Msa0376450:CDS |
| TGGAGAATGTGGGGAGCATA+AGG | 0.441829 | 3_1:-76571242 | None:intergenic |
| AACAGCAGAGGGACGAGTGC+AGG | 0.444736 | 3_1:-76569835 | None:intergenic |
| AATCGTGCTATATCTGTTTG+AGG | 0.448881 | 3_1:+76571569 | Msa0376450:CDS |
| GAAGCAGCGACGTATGCATT+TGG | 0.449296 | 3_1:+76570033 | Msa0376450:CDS |
| TCATGTCAAGCAAGCAACTT+TGG | 0.450868 | 3_1:+76569315 | Msa0376450:CDS |
| GAAGCAAACATGCCTTAACC+TGG | 0.450881 | 3_1:-76569153 | None:intergenic |
| ACAGTCATTATTCAGAAGCT+AGG | 0.451708 | 3_1:+76570633 | Msa0376450:CDS |
| TTGAATGCTCAATCCATTGA+CGG | 0.452532 | 3_1:+76568908 | Msa0376450:CDS |
| GTCTTGATCAACAACCTCAT+GGG | 0.455712 | 3_1:-76569368 | None:intergenic |
| TGCATTTGGCTCTATCTTGG+AGG | 0.457960 | 3_1:+76570047 | Msa0376450:CDS |
| GCTTGACATGAGCAGGAACT+TGG | 0.460430 | 3_1:-76569303 | None:intergenic |
| GATGGCCAACTTGGCCCATT+CGG | 0.460803 | 3_1:-76571546 | None:intergenic |
| TTGATGAATTCTTAAACCCT+TGG | 0.462813 | 3_1:-76571202 | None:intergenic |
| AATTGTACTCCAGAATTCAA+TGG | 0.464626 | 3_1:-76569719 | None:intergenic |
| AACCCTGGGCGAGAAAATAC+AGG | 0.464646 | 3_1:-76570320 | None:intergenic |
| CGCCCAGGGTTATGAGGATG+TGG | 0.470202 | 3_1:+76570332 | Msa0376450:CDS |
| TCCTGAATTGAAAATACGTC+TGG | 0.474094 | 3_1:+76569570 | Msa0376450:CDS |
| TTATATATGTCCTGGATGTA+AGG | 0.474321 | 3_1:-76569646 | None:intergenic |
| AACTGAAAGTATCTGTTTGA+AGG | 0.474424 | 3_1:+76571697 | Msa0376450:three_prime_UTR |
| GAGATGTACGCCCACACATC+AGG | 0.474951 | 3_1:+76571107 | Msa0376450:CDS |
| ACAAGAAGAGGATCAAGATC+TGG | 0.475193 | 3_1:+76569873 | Msa0376450:CDS |
| GATACACTTGGAAGCAATGC+TGG | 0.475465 | 3_1:+76571440 | Msa0376450:CDS |
| CTCTGTGGGTGACAGTGAGA+AGG | 0.475830 | 3_1:-76570401 | None:intergenic |
| AAACAGTGGCCTGAACTGAT+AGG | 0.477544 | 3_1:+76569259 | Msa0376450:CDS |
| AGATAATGGGACTATTCATC+CGG | 0.478120 | 3_1:+76570700 | Msa0376450:CDS |
| AAAATATTCCCTTACTGTGA+TGG | 0.478884 | 3_1:+76570927 | Msa0376450:CDS |
| AAATATTCCCTTACTGTGAT+GGG | 0.479316 | 3_1:+76570928 | Msa0376450:CDS |
| GTCATAATCCCATCACAGTA+AGG | 0.480569 | 3_1:-76570936 | None:intergenic |
| CGACATATGCAGGGCATTGG+AGG | 0.480820 | 3_1:+76570902 | Msa0376450:CDS |
| CATGGCCTCCTCATGGGCAG+TGG | 0.481836 | 3_1:-76570742 | None:intergenic |
| GATTAAAGAATCTGCCGAAT+GGG | 0.485471 | 3_1:+76571532 | Msa0376450:CDS |
| GCATTTGGCTCTATCTTGGA+GGG | 0.486868 | 3_1:+76570048 | Msa0376450:CDS |
| CAGAGGGACGAGTGCAGGAA+GGG | 0.487738 | 3_1:-76569830 | None:intergenic |
| GAATATGTGGGTGATACCAC+TGG | 0.488697 | 3_1:+76569769 | Msa0376450:CDS |
| TGCAAAGGTCAGTGATGCAT+TGG | 0.488912 | 3_1:-76571752 | None:intergenic |
| CAACAGTTACGGCACAAACT+TGG | 0.489107 | 3_1:-76570869 | None:intergenic |
| GTCCCTAATGTTGCTGAGAA+AGG | 0.491608 | 3_1:+76570288 | Msa0376450:CDS |
| CGGCGACATATGCAGGGCAT+TGG | 0.493884 | 3_1:+76570899 | Msa0376450:CDS |
| GAGAGAAGAAGAGCGAAGGA+AGG | 0.498995 | 3_1:-76567446 | None:intergenic |
| AGAATATTACCAAACCAGAT+TGG | 0.501979 | 3_1:+76570001 | Msa0376450:CDS |
| GTTGATAGCCGAAAGTTGGC+AGG | 0.503864 | 3_1:+76569037 | Msa0376450:CDS |
| CTGTGATGTTATATATGTCC+TGG | 0.504029 | 3_1:-76569654 | None:intergenic |
| GGTCTTGATCAACAACCTCA+TGG | 0.504483 | 3_1:-76569369 | None:intergenic |
| TGGCACACCTATTATTAATG+AGG | 0.506178 | 3_1:+76570218 | Msa0376450:CDS |
| GCGATGAAGATACCTGAAAT+CGG | 0.506359 | 3_1:-76567513 | None:intergenic |
| GAGCACTGAGCATAAATGGT+AGG | 0.506623 | 3_1:-76570110 | None:intergenic |
| CCTCTCTTGTACTTGACGCT+CGG | 0.507603 | 3_1:+76569185 | Msa0376450:CDS |
| GGTGATATAGCACTAGCTAT+AGG | 0.507802 | 3_1:+76571029 | Msa0376450:CDS |
| GCCGACTACACCAACAGTTA+CGG | 0.508961 | 3_1:-76570880 | None:intergenic |
| GTTGCTTGCTTGACATGAGC+AGG | 0.509107 | 3_1:-76569310 | None:intergenic |
| GCATATTCTGGGATCTTCCA+AGG | 0.514404 | 3_1:+76571185 | Msa0376450:CDS |
| ATCTGCCGAATGGGCCAAGT+TGG | 0.515537 | 3_1:+76571541 | Msa0376450:CDS |
| AGCTAGCATGGCCTCCTCAT+GGG | 0.516971 | 3_1:-76570748 | None:intergenic |
| TGATGCATTCTTGAACGTAC+TGG | 0.518086 | 3_1:-76571790 | None:intergenic |
| ACTTGTAATGCCTTTCATTG+AGG | 0.519790 | 3_1:+76569978 | Msa0376450:CDS |
| CCACACATCAGGCTTTGACT+TGG | 0.521208 | 3_1:+76571118 | Msa0376450:CDS |
| TGTCAGACTTGCTGCTGCCA+GGG | 0.521590 | 3_1:+76569453 | Msa0376450:CDS |
| ATGGCAGGTGGTACATGCCT+TGG | 0.523405 | 3_1:+76569919 | Msa0376450:CDS |
| AGCATGCTGAAGAAAGTCTT+CGG | 0.523420 | 3_1:+76568942 | Msa0376450:CDS |
| GGATATTAGAGGCATATTCT+GGG | 0.524280 | 3_1:+76571174 | Msa0376450:CDS |
| GTGTCTTTAACATGGTTGCT+TGG | 0.524596 | 3_1:-76570144 | None:intergenic |
| GGTGTGTCGAGGTGGGTCGT+GGG | 0.526216 | 3_1:+76571641 | Msa0376450:three_prime_UTR |
| ACCAGTTGATAGCCGAAAGT+TGG | 0.526677 | 3_1:+76569033 | Msa0376450:CDS |
| GTAATATTCTCCTCAATGAA+AGG | 0.527093 | 3_1:-76569988 | None:intergenic |
| TCTGTGGGTGACAGTGAGAA+GGG | 0.528574 | 3_1:-76570400 | None:intergenic |
| TAGCTAGCATGGCCTCCTCA+TGG | 0.530327 | 3_1:-76570749 | None:intergenic |
| AAGAGCGAAGGAAGGAAGGA+AGG | 0.530445 | 3_1:-76567438 | None:intergenic |
| ATCACCAATGCATGAAAACA+AGG | 0.531126 | 3_1:-76571012 | None:intergenic |
| TGATATCTTGGAAGAATATG+TGG | 0.534358 | 3_1:+76569756 | Msa0376450:CDS |
| GAAAGAGAGACCAAGAAACC+AGG | 0.534523 | 3_1:-76568986 | None:intergenic |
| CAAGCAACTTTGGAGACTCT+GGG | 0.535824 | 3_1:+76569325 | Msa0376450:CDS |
| AAAACAGCCATTGGTGTCGT+TGG | 0.535827 | 3_1:+76571407 | Msa0376450:CDS |
| AGTAATGTTTCCAACAGCAG+AGG | 0.542094 | 3_1:-76569847 | None:intergenic |
| TACTTTCAGTTGTCTGACCA+TGG | 0.542225 | 3_1:-76571685 | None:intergenic |
| CAGTCATTATTCAGAAGCTA+GGG | 0.543317 | 3_1:+76570634 | Msa0376450:CDS |
| GAGATCTGAAAGAGTAGCGA+GGG | 0.545164 | 3_1:-76567486 | None:intergenic |
| AACATTACTCAAACAAGAAG+AGG | 0.546231 | 3_1:+76569861 | Msa0376450:CDS |
| GTCATTAGACACTGCAGCGA+AGG | 0.546662 | 3_1:+76569129 | Msa0376450:CDS |
| GGACATCCTTCATGCTCTGA+AGG | 0.549506 | 3_1:-76570269 | None:intergenic |
| GGCACACCTATTATTAATGA+GGG | 0.549827 | 3_1:+76570219 | Msa0376450:CDS |
| ACACCACTGCTTGGACTTTG+GGG | 0.550181 | 3_1:+76570163 | Msa0376450:CDS |
| TTCCCACATCCTCATAACCC+TGG | 0.550647 | 3_1:-76570335 | None:intergenic |
| ATGTTAAAGACACCACTGCT+TGG | 0.550791 | 3_1:+76570154 | Msa0376450:CDS |
| CACATAATACATGGCCGCAA+TGG | 0.551428 | 3_1:-76569614 | None:intergenic |
| AGACACTGCAGCGAAGGCCC+AGG | 0.552156 | 3_1:+76569135 | Msa0376450:CDS |
| GCCGTAACTGTTGGTGTAGT+CGG | 0.552927 | 3_1:+76570879 | Msa0376450:CDS |
| TGCATTTGGGTGTGTCGAGG+TGG | 0.554275 | 3_1:+76571633 | Msa0376450:three_prime_UTR |
| ACTAGTTTCTGTCATCATGA+TGG | 0.555623 | 3_1:+76570521 | Msa0376450:CDS |
| CTGTCAAGCACCCACAAAGA+AGG | 0.556847 | 3_1:-76570614 | None:intergenic |
| CTCCGTAGCATCCTCTCTGT+GGG | 0.557611 | 3_1:-76570415 | None:intergenic |
| CATTTGGCTCTATCTTGGAG+GGG | 0.558186 | 3_1:+76570049 | Msa0376450:CDS |
| GAGGATCAAGATCTGGATGA+AGG | 0.560543 | 3_1:+76569880 | Msa0376450:CDS |
| TATCCAAGAACTGGAGAATG+TGG | 0.561174 | 3_1:-76571253 | None:intergenic |
| AAGGGCTCCAATAGCTAGCA+TGG | 0.562861 | 3_1:-76570760 | None:intergenic |
| GAAGTTGGCTCCTTACATCC+AGG | 0.563506 | 3_1:+76569636 | Msa0376450:CDS |
| TCCCACATCCTCATAACCCT+GGG | 0.563687 | 3_1:-76570334 | None:intergenic |
| AGCATAAGGAATCAAGATCT+GGG | 0.564981 | 3_1:-76571228 | None:intergenic |
| AGCGGGAATTGGTTCAGAGA+TGG | 0.567281 | 3_1:+76569104 | Msa0376450:CDS |
| TTTCTTGGTCTCTCTTTCTG+GGG | 0.568371 | 3_1:+76568991 | Msa0376450:CDS |
| CATAGCGATGGAAGTTACTC+AGG | 0.569430 | 3_1:+76568880 | Msa0376450:exon |
| ATGAGAGAGAAGAAGAGCGA+AGG | 0.571053 | 3_1:-76567450 | None:intergenic |
| AATGTTGCTGAGAAAGGCTG+TGG | 0.571738 | 3_1:+76570294 | Msa0376450:CDS |
| AGTTCTCCTTCAGAGCATGA+AGG | 0.572114 | 3_1:+76570263 | Msa0376450:CDS |
| AGTTCAGGCCACTGTTTCTG+AGG | 0.572502 | 3_1:-76569253 | None:intergenic |
| GCAGAGGGACGAGTGCAGGA+AGG | 0.572612 | 3_1:-76569831 | None:intergenic |
| GAAACTTGTAAAATTCAGGC+AGG | 0.572839 | 3_1:-76570815 | None:intergenic |
| CAAGGATGAAAACAGAAAGC+GGG | 0.572936 | 3_1:+76569087 | Msa0376450:CDS |
| GTTCTTGGATAGCATATACA+TGG | 0.572950 | 3_1:+76571265 | Msa0376450:CDS |
| TGATTAAAGAATCTGCCGAA+TGG | 0.574297 | 3_1:+76571531 | Msa0376450:CDS |
| CCAAACCAGATTGGAGACAG+AGG | 0.578424 | 3_1:+76570010 | Msa0376450:CDS |
| CATATTCTGGGATCTTCCAA+GGG | 0.579806 | 3_1:+76571186 | Msa0376450:CDS |
| TAATGCTCTCGAATTTGCGC+AGG | 0.579901 | 3_1:+76569483 | Msa0376450:CDS |
| ACTCCGTAGCATCCTCTCTG+TGG | 0.580534 | 3_1:-76570416 | None:intergenic |
| CAAGTCAAAGCCTGATGTGT+GGG | 0.580869 | 3_1:-76571117 | None:intergenic |
| GCATTTGGGTGTGTCGAGGT+GGG | 0.581701 | 3_1:+76571634 | Msa0376450:three_prime_UTR |
| ATCCAAGAACTGGAGAATGT+GGG | 0.582057 | 3_1:-76571252 | None:intergenic |
| GGTACTAATTTGTCTGGAGA+AGG | 0.583117 | 3_1:-76570072 | None:intergenic |
| CAGGGCCTATCGCATAGGCA+AGG | 0.584847 | 3_1:-76570779 | None:intergenic |
| GGTACTCCTCAAAATTCTGA+AGG | 0.586729 | 3_1:-76570848 | None:intergenic |
| CAATCGCAAGTAGAGATGCC+AGG | 0.587827 | 3_1:-76567404 | None:intergenic |
| GGAGCCCTTGCCTATGCGAT+AGG | 0.588549 | 3_1:+76570774 | Msa0376450:CDS |
| TGAATGTTTGGTCTCCATTG+CGG | 0.588682 | 3_1:+76569600 | Msa0376450:CDS |
| AGCCAACTTCACATAATACA+TGG | 0.590438 | 3_1:-76569623 | None:intergenic |
| TCATAATCCCATCACAGTAA+GGG | 0.590523 | 3_1:-76570935 | None:intergenic |
| AGCACTGAGCATAAATGGTA+GGG | 0.592192 | 3_1:-76570109 | None:intergenic |
| AAGATCTGGATGAAGGTGCA+TGG | 0.593145 | 3_1:+76569887 | Msa0376450:CDS |
| AAAATCAGGGCCTATCGCAT+AGG | 0.593832 | 3_1:-76570784 | None:intergenic |
| AGGGCCTATCGCATAGGCAA+GGG | 0.594941 | 3_1:-76570778 | None:intergenic |
| TCTGAAAGAGTAGCGAGGGA+AGG | 0.596629 | 3_1:-76567482 | None:intergenic |
| TTTAATCATATGATCATCTG+AGG | 0.597486 | 3_1:-76571516 | None:intergenic |
| GGCCATGTATTATGTGAAGT+TGG | 0.601747 | 3_1:+76569621 | Msa0376450:CDS |
| ATTGTTATGAAAACAGCCAT+TGG | 0.603401 | 3_1:+76571398 | Msa0376450:CDS |
| TTAAGTCCAGTACTTTCAAG+AGG | 0.603890 | 3_1:+76571834 | Msa0376450:three_prime_UTR |
| GAGAGCATTATACAATGCCC+TGG | 0.604361 | 3_1:-76569470 | None:intergenic |
| CCACTGCTTGGACTTTGGGG+CGG | 0.604774 | 3_1:+76570166 | Msa0376450:CDS |
| CATTTCTACAAGCAAAGACC+CGG | 0.606986 | 3_1:-76570719 | None:intergenic |
| GCATGGAATATTGCAATGGC+AGG | 0.607121 | 3_1:+76569904 | Msa0376450:CDS |
| CCGAGCGTCAAGTACAAGAG+AGG | 0.607157 | 3_1:-76569185 | None:intergenic |
| AAGCAGTGGTGTCTTTAACA+TGG | 0.611461 | 3_1:-76570152 | None:intergenic |
| GATAATGGGACTATTCATCC+GGG | 0.613080 | 3_1:+76570701 | Msa0376450:CDS |
| CACCAATGCATGAAAACAAG+GGG | 0.613111 | 3_1:-76571010 | None:intergenic |
| CAAGTTTGTGCCGTAACTGT+TGG | 0.613695 | 3_1:+76570870 | Msa0376450:CDS |
| TCACCAATGCATGAAAACAA+GGG | 0.614256 | 3_1:-76571011 | None:intergenic |
| GCAGGTATTTAGCAAAATCA+GGG | 0.614526 | 3_1:-76570797 | None:intergenic |
| CCAAGGATGAAAACAGAAAG+CGG | 0.615724 | 3_1:+76569086 | Msa0376450:CDS |
| ATGCAAGTAGTTTATGACAA+AGG | 0.616263 | 3_1:-76571611 | None:intergenic |
| TATGCTCAGTGCTCTAGTGA+AGG | 0.618237 | 3_1:+76570119 | Msa0376450:CDS |
| AAGCAAACATGCCTTAACCT+GGG | 0.618785 | 3_1:-76569152 | None:intergenic |
| AATATGTGGGTGATACCACT+GGG | 0.618894 | 3_1:+76569770 | Msa0376450:CDS |
| ACTTAATGGTGCTCATGCAA+AGG | 0.619089 | 3_1:-76571767 | None:intergenic |
| CACCCACAGAGAGGATGCTA+CGG | 0.620015 | 3_1:+76570413 | Msa0376450:CDS |
| TGCAAGAGAACATATTTGGT+AGG | 0.622823 | 3_1:-76570666 | None:intergenic |
| TAGAAATGCCACTGCCCATG+AGG | 0.623921 | 3_1:+76570734 | Msa0376450:CDS |
| TCCAAGAACTGGAGAATGTG+GGG | 0.625954 | 3_1:-76571251 | None:intergenic |
| CCAAGTCAAAGCCTGATGTG+TGG | 0.626187 | 3_1:-76571118 | None:intergenic |
| CATATATAACATCACAGCAA+AGG | 0.628146 | 3_1:+76569660 | Msa0376450:CDS |
| TAGATCTCCAACGACACCAA+TGG | 0.633027 | 3_1:-76571414 | None:intergenic |
| GAGAGGATGCTACGGAGTCA+CGG | 0.633129 | 3_1:+76570421 | Msa0376450:CDS |
| GTAATGTTTCCAACAGCAGA+GGG | 0.633616 | 3_1:-76569846 | None:intergenic |
| GAGAGACCAAGAAACCAGGA+AGG | 0.634178 | 3_1:-76568982 | None:intergenic |
| CATGTGTCAAATTGTCTCCA+TGG | 0.634249 | 3_1:+76571668 | Msa0376450:three_prime_UTR |
| GAAACTAGTTGCAACACCAA+AGG | 0.635429 | 3_1:-76570507 | None:intergenic |
| AAAGGCTGTTAGGAGTGATG+AGG | 0.635593 | 3_1:+76569678 | Msa0376450:CDS |
| GCATGCATTTGGGTGTGTCG+AGG | 0.637611 | 3_1:+76571630 | Msa0376450:three_prime_UTR |
| AAATGCCACTGCCCATGAGG+AGG | 0.637700 | 3_1:+76570737 | Msa0376450:CDS |
| TCTTGATCAACAACCTCATG+GGG | 0.640057 | 3_1:-76569367 | None:intergenic |
| TGGAATATTGCAATGGCAGG+TGG | 0.641007 | 3_1:+76569907 | Msa0376450:CDS |
| GGAGATCTAGCTGATACACT+TGG | 0.641148 | 3_1:+76571428 | Msa0376450:CDS |
| TTGAGCTTCCTCAGAAACAG+TGG | 0.646805 | 3_1:+76569245 | Msa0376450:CDS |
| TGTAGTCGGCGACATATGCA+GGG | 0.652462 | 3_1:+76570893 | Msa0376450:CDS |
| GACTCTGGGGTATTTGTGTG+AGG | 0.657648 | 3_1:+76569339 | Msa0376450:CDS |
| CAAACCAGATTGGAGACAGA+GGG | 0.659105 | 3_1:+76570011 | Msa0376450:CDS |
| GCCCAGGGTTATGAGGATGT+GGG | 0.661982 | 3_1:+76570333 | Msa0376450:CDS |
| AGAGATCTGAAAGAGTAGCG+AGG | 0.664338 | 3_1:-76567487 | None:intergenic |
| TCAATGAAAGGCATTACAAG+TGG | 0.666073 | 3_1:-76569976 | None:intergenic |
| GATATCTTGGAAGAATATGT+GGG | 0.670018 | 3_1:+76569757 | Msa0376450:CDS |
| CATCAGGTATAGCATAGCGA+TGG | 0.670697 | 3_1:+76568868 | Msa0376450:intron |
| ACCCTGGGCGAGAAAATACA+GGG | 0.671132 | 3_1:-76570319 | None:intergenic |
| CCGCCCCAAAGTCCAAGCAG+TGG | 0.671300 | 3_1:-76570166 | None:intergenic |
| GAAACAAAACGAGTATGACC+TGG | 0.672463 | 3_1:+76567386 | None:intergenic |
| GGTAGGGCGTGATTAACAAG+AGG | 0.685210 | 3_1:-76570093 | None:intergenic |
| ACCAATGCATGAAAACAAGG+GGG | 0.694702 | 3_1:-76571009 | None:intergenic |
| CCAATGCATGAAAACAAGGG+GGG | 0.695534 | 3_1:-76571008 | None:intergenic |
| AAGCAACTTTGGAGACTCTG+GGG | 0.702950 | 3_1:+76569326 | Msa0376450:CDS |
| AGGTGCATGGAATATTGCAA+TGG | 0.707284 | 3_1:+76569900 | Msa0376450:CDS |
| TAGTACGAGCAACTAAACCA+AGG | 0.708913 | 3_1:-76569936 | None:intergenic |
| TCTCACTGTCACCCACAGAG+AGG | 0.716309 | 3_1:+76570404 | Msa0376450:CDS |
| CTTGATCAACAACCTCATGG+GGG | 0.733599 | 3_1:-76569366 | None:intergenic |
| AGGAAGGAAGGAAGGAACAG+CGG | 0.735032 | 3_1:-76567430 | None:intergenic |
| AGGTATATCAGAGTCCCCAG+TGG | 0.773955 | 3_1:-76569785 | None:intergenic |
| ATATGTGGGTGATACCACTG+GGG | 0.840024 | 3_1:+76569771 | Msa0376450:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTAAATCCTAAAATTT+CGG | + | chr3_1:76567953-76567972 | Msa0376450:intron | 10.0% |
| !!! | ATACAAAATATGTTATTTAA+TGG | - | chr3_1:76568307-76568326 | None:intergenic | 10.0% |
| !! | ATTTATTAACTGTAAAATAA+TGG | + | chr3_1:76568739-76568758 | Msa0376450:intron | 10.0% |
| !! | TAAAAATTAAGAAAAACAAA+AGG | - | chr3_1:76568800-76568819 | None:intergenic | 10.0% |
| !!! | AATTTTTTTTTACTTTAAAG+TGG | + | chr3_1:76568819-76568838 | Msa0376450:intron | 10.0% |
| !! | ATAGTATTTATGAAATTACA+TGG | + | chr3_1:76567785-76567804 | Msa0376450:intron | 15.0% |
| !! | TTATTAAATCCTAAAATTTC+GGG | + | chr3_1:76567954-76567973 | Msa0376450:intron | 15.0% |
| !!! | TCATTTTTTCAAATTTTTAC+CGG | + | chr3_1:76568082-76568101 | Msa0376450:intron | 15.0% |
| !! | TATTGCTATGAAAATTAAAT+TGG | - | chr3_1:76571326-76571345 | None:intergenic | 15.0% |
| !!! | AATTTTTGTTTATGCGATTT+AGG | + | chr3_1:76567609-76567628 | Msa0376450:intron | 20.0% |
| !! | ATTTATGAAATTACATGGAA+TGG | + | chr3_1:76567790-76567809 | Msa0376450:intron | 20.0% |
| !!! | GAATAGTTATTTATTTTCTG+TGG | + | chr3_1:76567853-76567872 | Msa0376450:intron | 20.0% |
| !! | GAAACATATTTGATGTTAAT+AGG | + | chr3_1:76568230-76568249 | Msa0376450:intron | 20.0% |
| !!! | AAATGTTTTTAATGATTCGA+CGG | + | chr3_1:76568555-76568574 | Msa0376450:intron | 20.0% |
| !! | AACAAAGCAATATATAAAGA+TGG | - | chr3_1:76568682-76568701 | None:intergenic | 20.0% |
| !! | TTTGATACTTAAAAATGCAT+TGG | + | chr3_1:76569060-76569079 | Msa0376450:CDS | 20.0% |
| !!! | CAGTAAGAATTTTATTTACT+TGG | - | chr3_1:76569393-76569412 | None:intergenic | 20.0% |
| !! | TGCTTAATGAAATAAAAACA+AGG | - | chr3_1:76569808-76569827 | None:intergenic | 20.0% |
| ! | TAACACCAGAAAAGTAAAAT+CGG | - | chr3_1:76567578-76567597 | None:intergenic | 25.0% |
| !!! | TTGGACAGTTTTAATTTATC+AGG | + | chr3_1:76567831-76567850 | Msa0376450:intron | 25.0% |
| !! | TGATTAGATGAAGTGAATTT+TGG | + | chr3_1:76567923-76567942 | Msa0376450:intron | 25.0% |
| ! | CTTCAAGGTTAATATCATAT+TGG | + | chr3_1:76568173-76568192 | Msa0376450:intron | 25.0% |
| !! | GTAAAAAGTTTTTACACTGT+CGG | + | chr3_1:76568481-76568500 | Msa0376450:intron | 25.0% |
| !!! | AATGTTTTTAATGATTCGAC+GGG | + | chr3_1:76568556-76568575 | Msa0376450:intron | 25.0% |
| ! | GTAAAATTTCATTACACTGA+CGG | + | chr3_1:76568596-76568615 | Msa0376450:intron | 25.0% |
| ! | ATTCTTATAAAATTCTCCGA+CGG | + | chr3_1:76568633-76568652 | Msa0376450:intron | 25.0% |
| !! | AGTATATTGTTGTTATAGTG+TGG | + | chr3_1:76568656-76568675 | Msa0376450:intron | 25.0% |
| !!! | GAGAACTGTAATAATTTGTT+GGG | - | chr3_1:76570250-76570269 | None:intergenic | 25.0% |
| ! | TGAACAATTTCCTGAAAAAA+GGG | - | chr3_1:76570378-76570397 | None:intergenic | 25.0% |
| ! | TTGAACAATTTCCTGAAAAA+AGG | - | chr3_1:76570379-76570398 | None:intergenic | 25.0% |
| ! | TCAAGAAACTTGTAAAATTC+AGG | - | chr3_1:76570822-76570841 | None:intergenic | 25.0% |
| !! | TACATTAACTCTTTGAGAAA+TGG | + | chr3_1:76571152-76571171 | Msa0376450:CDS | 25.0% |
| !! | ACATTAACTCTTTGAGAAAT+GGG | + | chr3_1:76571153-76571172 | Msa0376450:CDS | 25.0% |
| ! | TTTAATCATATGATCATCTG+AGG | - | chr3_1:76571519-76571538 | None:intergenic | 25.0% |
| ! | TAGATTGCTTTGATTCGATA+CGG | + | chr3_1:76567641-76567660 | Msa0376450:intron | 30.0% |
| ACTAGTATTCGATCTATCAT+CGG | + | chr3_1:76567700-76567719 | Msa0376450:intron | 30.0% | |
| CGCACAAATTCAATATCAAA+GGG | - | chr3_1:76567746-76567765 | None:intergenic | 30.0% | |
| TCGCACAAATTCAATATCAA+AGG | - | chr3_1:76567747-76567766 | None:intergenic | 30.0% | |
| GTTCCATTCATACAAGTATT+TGG | + | chr3_1:76567812-76567831 | Msa0376450:intron | 30.0% | |
| TGTCCAAATACTTGTATGAA+TGG | - | chr3_1:76567818-76567837 | None:intergenic | 30.0% | |
| ! | GATGAAGTGAATTTTGGATT+TGG | + | chr3_1:76567929-76567948 | Msa0376450:intron | 30.0% |
| AAATCCTAAAATTTCGGGAT+CGG | + | chr3_1:76567959-76567978 | Msa0376450:intron | 30.0% | |
| TTACATGTAATCACATGTGT+AGG | - | chr3_1:76568057-76568076 | None:intergenic | 30.0% | |
| GTTAATAGGTGTTCTCAATA+TGG | + | chr3_1:76568244-76568263 | Msa0376450:intron | 30.0% | |
| AATATAGTCATATGACAGTG+TGG | - | chr3_1:76568405-76568424 | None:intergenic | 30.0% | |
| ! | TACTTCTAAAGACGCATATA+TGG | - | chr3_1:76568521-76568540 | None:intergenic | 30.0% |
| !!! | ATGCGTCTTTAGAAGTATTT+TGG | + | chr3_1:76568524-76568543 | Msa0376450:intron | 30.0% |
| ATAACAACAATATACTCCGT+CGG | - | chr3_1:76568652-76568671 | None:intergenic | 30.0% | |
| AGGAGTCTATAATATTGAAG+AGG | - | chr3_1:76568765-76568784 | None:intergenic | 30.0% | |
| AGAAAAACAAAAGGCAAAAC+AGG | - | chr3_1:76568791-76568810 | None:intergenic | 30.0% | |
| !! | GGCTAATTTTAGCAATGATA+TGG | + | chr3_1:76569504-76569523 | Msa0376450:CDS | 30.0% |
| TTATATATGTCCTGGATGTA+AGG | - | chr3_1:76569649-76569668 | None:intergenic | 30.0% | |
| CATATATAACATCACAGCAA+AGG | + | chr3_1:76569660-76569679 | Msa0376450:CDS | 30.0% | |
| AATTGTACTCCAGAATTCAA+TGG | - | chr3_1:76569722-76569741 | None:intergenic | 30.0% | |
| TGATATCTTGGAAGAATATG+TGG | + | chr3_1:76569756-76569775 | Msa0376450:CDS | 30.0% | |
| GATATCTTGGAAGAATATGT+GGG | + | chr3_1:76569757-76569776 | Msa0376450:CDS | 30.0% | |
| AACATTACTCAAACAAGAAG+AGG | + | chr3_1:76569861-76569880 | Msa0376450:CDS | 30.0% | |
| GTAATATTCTCCTCAATGAA+AGG | - | chr3_1:76569991-76570010 | None:intergenic | 30.0% | |
| AGAATATTACCAAACCAGAT+TGG | + | chr3_1:76570001-76570020 | Msa0376450:CDS | 30.0% | |
| TTTCTTCACAGTTCAATTGT+TGG | + | chr3_1:76570198-76570217 | Msa0376450:CDS | 30.0% | |
| GCATTTCCCTCATTAATAAT+AGG | - | chr3_1:76570228-76570247 | None:intergenic | 30.0% | |
| ! | GGAGAACTGTAATAATTTGT+TGG | - | chr3_1:76570251-76570270 | None:intergenic | 30.0% |
| GAAAAACAGAGTGAACTTAT+AGG | + | chr3_1:76570591-76570610 | Msa0376450:CDS | 30.0% | |
| ATACTGCAAGAGAACATATT+TGG | - | chr3_1:76570673-76570692 | None:intergenic | 30.0% | |
| AAAATATTCCCTTACTGTGA+TGG | + | chr3_1:76570927-76570946 | Msa0376450:CDS | 30.0% | |
| AAATATTCCCTTACTGTGAT+GGG | + | chr3_1:76570928-76570947 | Msa0376450:CDS | 30.0% | |
| TTTGAGAAATGGGATATTAG+AGG | + | chr3_1:76571163-76571182 | Msa0376450:CDS | 30.0% | |
| TTGATGAATTCTTAAACCCT+TGG | - | chr3_1:76571205-76571224 | None:intergenic | 30.0% | |
| ATTGTTATGAAAACAGCCAT+TGG | + | chr3_1:76571398-76571417 | Msa0376450:CDS | 30.0% | |
| TGACAAAGACTGTTGAATTA+AGG | - | chr3_1:76571468-76571487 | None:intergenic | 30.0% | |
| ATGCAAGTAGTTTATGACAA+AGG | - | chr3_1:76571614-76571633 | None:intergenic | 30.0% | |
| ATAAACTACTTGCATGCATT+TGG | + | chr3_1:76571619-76571638 | Msa0376450:three_prime_UTR | 30.0% | |
| TAAACTACTTGCATGCATTT+GGG | + | chr3_1:76571620-76571639 | Msa0376450:three_prime_UTR | 30.0% | |
| !! | AACTGAAAGTATCTGTTTGA+AGG | + | chr3_1:76571697-76571716 | Msa0376450:three_prime_UTR | 30.0% |
| GAAAAAGGAAGAACGTAGAT+CGG | - | chr3_1:76567543-76567562 | None:intergenic | 35.0% | |
| CCAGAAAAGTAAAATCGGAA+GGG | - | chr3_1:76567573-76567592 | None:intergenic | 35.0% | |
| ACCAGAAAAGTAAAATCGGA+AGG | - | chr3_1:76567574-76567593 | None:intergenic | 35.0% | |
| !! | ACGGTTAGTTTATGATCGAT+TGG | + | chr3_1:76567660-76567679 | Msa0376450:intron | 35.0% |
| ! | AACGTAGTAGGACTAAGTTT+TGG | + | chr3_1:76567988-76568007 | Msa0376450:intron | 35.0% |
| AACCTTGAAGCTATAAAGCA+CGG | - | chr3_1:76568163-76568182 | None:intergenic | 35.0% | |
| !!! | TTGTCGTTTGTCTTTTTTCC+TGG | + | chr3_1:76568368-76568387 | Msa0376450:intron | 35.0% |
| !! | TTGCTTTGTTTCTCTCCAAT+TGG | + | chr3_1:76568692-76568711 | Msa0376450:intron | 35.0% |
| ACAAAAGGCAAAACAGGATA+AGG | - | chr3_1:76568785-76568804 | None:intergenic | 35.0% | |
| TTGAATGCTCAATCCATTGA+CGG | + | chr3_1:76568908-76568927 | Msa0376450:CDS | 35.0% | |
| TAAAAATGCATTGGATGCCA+AGG | + | chr3_1:76569069-76569088 | Msa0376450:CDS | 35.0% | |
| CAAGTTGTTGCTAAAATTGC+TGG | + | chr3_1:76569220-76569239 | Msa0376450:CDS | 35.0% | |
| AATAGTGATCCTATCAGTTC+AGG | - | chr3_1:76569271-76569290 | None:intergenic | 35.0% | |
| ATTCTTACTGCTGTAGTTCA+AGG | + | chr3_1:76569403-76569422 | Msa0376450:CDS | 35.0% | |
| TCCTGAATTGAAAATACGTC+TGG | + | chr3_1:76569570-76569589 | Msa0376450:CDS | 35.0% | |
| AGCCAACTTCACATAATACA+TGG | - | chr3_1:76569626-76569645 | None:intergenic | 35.0% | |
| CTGTGATGTTATATATGTCC+TGG | - | chr3_1:76569657-76569676 | None:intergenic | 35.0% | |
| TGATGAAGAGACTGATATCT+TGG | + | chr3_1:76569744-76569763 | Msa0376450:CDS | 35.0% | |
| !! | TCAATGAAAGGCATTACAAG+TGG | - | chr3_1:76569979-76569998 | None:intergenic | 35.0% |
| ACTTGTAATGCCTTTCATTG+AGG | + | chr3_1:76569978-76569997 | Msa0376450:CDS | 35.0% | |
| !! | ACAAGAGGTACTAATTTGTC+TGG | - | chr3_1:76570081-76570100 | None:intergenic | 35.0% |
| TGGCACACCTATTATTAATG+AGG | + | chr3_1:76570218-76570237 | Msa0376450:CDS | 35.0% | |
| GGCACACCTATTATTAATGA+GGG | + | chr3_1:76570219-76570238 | Msa0376450:CDS | 35.0% | |
| CTGAAAAAAGGGAGTTATAG+GGG | - | chr3_1:76570367-76570386 | None:intergenic | 35.0% | |
| CCTGAAAAAAGGGAGTTATA+GGG | - | chr3_1:76570368-76570387 | None:intergenic | 35.0% | |
| TCCTGAAAAAAGGGAGTTAT+AGG | - | chr3_1:76570369-76570388 | None:intergenic | 35.0% | |
| ! | ACTAGTTTCTGTCATCATGA+TGG | + | chr3_1:76570521-76570540 | Msa0376450:CDS | 35.0% |
| AACTTATAGGCCTTCTTTGT+GGG | + | chr3_1:76570604-76570623 | Msa0376450:CDS | 35.0% | |
| ACAGTCATTATTCAGAAGCT+AGG | + | chr3_1:76570633-76570652 | Msa0376450:CDS | 35.0% | |
| CAGTCATTATTCAGAAGCTA+GGG | + | chr3_1:76570634-76570653 | Msa0376450:CDS | 35.0% | |
| TGCAAGAGAACATATTTGGT+AGG | - | chr3_1:76570669-76570688 | None:intergenic | 35.0% | |
| CAGTATGCTGATCAGATAAT+GGG | + | chr3_1:76570687-76570706 | Msa0376450:CDS | 35.0% | |
| !! | AGATAATGGGACTATTCATC+CGG | + | chr3_1:76570700-76570719 | Msa0376450:CDS | 35.0% |
| GCAGGTATTTAGCAAAATCA+GGG | - | chr3_1:76570800-76570819 | None:intergenic | 35.0% | |
| GAAACTTGTAAAATTCAGGC+AGG | - | chr3_1:76570818-76570837 | None:intergenic | 35.0% | |
| ! | GATTGACCTTCAGAATTTTG+AGG | + | chr3_1:76570842-76570861 | Msa0376450:CDS | 35.0% |
| TCATAATCCCATCACAGTAA+GGG | - | chr3_1:76570938-76570957 | None:intergenic | 35.0% | |
| TCACCAATGCATGAAAACAA+GGG | - | chr3_1:76571014-76571033 | None:intergenic | 35.0% | |
| ATCACCAATGCATGAAAACA+AGG | - | chr3_1:76571015-76571034 | None:intergenic | 35.0% | |
| ! | GGATATTAGAGGCATATTCT+GGG | + | chr3_1:76571174-76571193 | Msa0376450:CDS | 35.0% |
| AGCATAAGGAATCAAGATCT+GGG | - | chr3_1:76571231-76571250 | None:intergenic | 35.0% | |
| TGTATATGCTATCCAAGAAC+TGG | - | chr3_1:76571265-76571284 | None:intergenic | 35.0% | |
| GTTCTTGGATAGCATATACA+TGG | + | chr3_1:76571265-76571284 | Msa0376450:CDS | 35.0% | |
| !!! | TCATTGACTTTTCTTACTGC+AGG | + | chr3_1:76571369-76571388 | Msa0376450:intron | 35.0% |
| !!! | CATTGACTTTTCTTACTGCA+GGG | + | chr3_1:76571370-76571389 | Msa0376450:intron | 35.0% |
| TGATTAAAGAATCTGCCGAA+TGG | + | chr3_1:76571531-76571550 | Msa0376450:CDS | 35.0% | |
| GATTAAAGAATCTGCCGAAT+GGG | + | chr3_1:76571532-76571551 | Msa0376450:CDS | 35.0% | |
| AACAGATATAGCACGATTGA+TGG | - | chr3_1:76571567-76571586 | None:intergenic | 35.0% | |
| AATCGTGCTATATCTGTTTG+AGG | + | chr3_1:76571569-76571588 | Msa0376450:CDS | 35.0% | |
| !! | CTTGAAAGTACTGGACTTAA+TGG | - | chr3_1:76571834-76571853 | None:intergenic | 35.0% |
| GCGATGAAGATACCTGAAAT+CGG | - | chr3_1:76567516-76567535 | None:intergenic | 40.0% | |
| CGGAAGGGAAATAACGAAAA+AGG | - | chr3_1:76567558-76567577 | None:intergenic | 40.0% | |
| !! | CCCTTCCGATTTTACTTTTC+TGG | + | chr3_1:76567570-76567589 | Msa0376450:intron | 40.0% |
| TCTGTGGTAGACAGAGATAT+CGG | + | chr3_1:76567869-76567888 | Msa0376450:intron | 40.0% | |
| CTAAAATTTCGGGATCGGTA+GGG | + | chr3_1:76567964-76567983 | Msa0376450:intron | 40.0% | |
| GTATCGTGTCTGTGTAGTAT+CGG | - | chr3_1:76568035-76568054 | None:intergenic | 40.0% | |
| ATAAAGCACGGACACAAATG+CGG | - | chr3_1:76568151-76568170 | None:intergenic | 40.0% | |
| ! | TTGGCTTTCATCAAGTCTGT+TGG | + | chr3_1:76568192-76568211 | Msa0376450:intron | 40.0% |
| AGATCCAGAGACTAACCAAT+TGG | - | chr3_1:76568710-76568729 | None:intergenic | 40.0% | |
| ACCTGATGGCACAGAATAAT+TGG | - | chr3_1:76568856-76568875 | None:intergenic | 40.0% | |
| AGCATGCTGAAGAAAGTCTT+CGG | + | chr3_1:76568942-76568961 | Msa0376450:CDS | 40.0% | |
| AGAAAGTCTTCGGCAATTTC+AGG | + | chr3_1:76568952-76568971 | Msa0376450:CDS | 40.0% | |
| GTTTCTTGGTCTCTCTTTCT+GGG | + | chr3_1:76568990-76569009 | Msa0376450:CDS | 40.0% | |
| TTTCTTGGTCTCTCTTTCTG+GGG | + | chr3_1:76568991-76569010 | Msa0376450:CDS | 40.0% | |
| GTATCAAACCTGCCAACTTT+CGG | - | chr3_1:76569048-76569067 | None:intergenic | 40.0% | |
| CCAAGGATGAAAACAGAAAG+CGG | + | chr3_1:76569086-76569105 | Msa0376450:CDS | 40.0% | |
| CAAGGATGAAAACAGAAAGC+GGG | + | chr3_1:76569087-76569106 | Msa0376450:CDS | 40.0% | |
| TGAAAACAGAAAGCGGGAAT+TGG | + | chr3_1:76569093-76569112 | Msa0376450:CDS | 40.0% | |
| AAGCAAACATGCCTTAACCT+GGG | - | chr3_1:76569155-76569174 | None:intergenic | 40.0% | |
| TCATGTCAAGCAAGCAACTT+TGG | + | chr3_1:76569315-76569334 | Msa0376450:CDS | 40.0% | |
| TCTTGATCAACAACCTCATG+GGG | - | chr3_1:76569370-76569389 | None:intergenic | 40.0% | |
| GTCTTGATCAACAACCTCAT+GGG | - | chr3_1:76569371-76569390 | None:intergenic | 40.0% | |
| ! | GCCAGACGTATTTTCAATTC+AGG | - | chr3_1:76569574-76569593 | None:intergenic | 40.0% |
| ! | TCTGGCAGCTTTTGAATGTT+TGG | + | chr3_1:76569588-76569607 | Msa0376450:CDS | 40.0% |
| TGAATGTTTGGTCTCCATTG+CGG | + | chr3_1:76569600-76569619 | Msa0376450:CDS | 40.0% | |
| GGCCATGTATTATGTGAAGT+TGG | + | chr3_1:76569621-76569640 | Msa0376450:CDS | 40.0% | |
| TACTCCAGAATTCAATGGCT+TGG | - | chr3_1:76569717-76569736 | None:intergenic | 40.0% | |
| AATATGTGGGTGATACCACT+GGG | + | chr3_1:76569770-76569789 | Msa0376450:CDS | 40.0% | |
| GTAATGTTTCCAACAGCAGA+GGG | - | chr3_1:76569849-76569868 | None:intergenic | 40.0% | |
| AGTAATGTTTCCAACAGCAG+AGG | - | chr3_1:76569850-76569869 | None:intergenic | 40.0% | |
| ACAAGAAGAGGATCAAGATC+TGG | + | chr3_1:76569873-76569892 | Msa0376450:CDS | 40.0% | |
| AGGTGCATGGAATATTGCAA+TGG | + | chr3_1:76569900-76569919 | Msa0376450:CDS | 40.0% | |
| TAGTACGAGCAACTAAACCA+AGG | - | chr3_1:76569939-76569958 | None:intergenic | 40.0% | |
| !! | GTATGCATTTGGCTCTATCT+TGG | + | chr3_1:76570044-76570063 | Msa0376450:CDS | 40.0% |
| ! | GGTACTAATTTGTCTGGAGA+AGG | - | chr3_1:76570075-76570094 | None:intergenic | 40.0% |
| ! | AGCACTGAGCATAAATGGTA+GGG | - | chr3_1:76570112-76570131 | None:intergenic | 40.0% |
| !! | ACTAGAGCACTGAGCATAAA+TGG | - | chr3_1:76570117-76570136 | None:intergenic | 40.0% |
| GTGTCTTTAACATGGTTGCT+TGG | - | chr3_1:76570147-76570166 | None:intergenic | 40.0% | |
| AAGCAGTGGTGTCTTTAACA+TGG | - | chr3_1:76570155-76570174 | None:intergenic | 40.0% | |
| ATGTTAAAGACACCACTGCT+TGG | + | chr3_1:76570154-76570173 | Msa0376450:CDS | 40.0% | |
| AGCCTTTCTCAGCAACATTA+GGG | - | chr3_1:76570293-76570312 | None:intergenic | 40.0% | |
| !!! | CCCTATAACTCCCTTTTTTC+AGG | + | chr3_1:76570365-76570384 | Msa0376450:CDS | 40.0% |
| AACAGATGAAACAGCTCCTT+TGG | + | chr3_1:76570491-76570510 | Msa0376450:CDS | 40.0% | |
| GAAACTAGTTGCAACACCAA+AGG | - | chr3_1:76570510-76570529 | None:intergenic | 40.0% | |
| GAACTTATAGGCCTTCTTTG+TGG | + | chr3_1:76570603-76570622 | Msa0376450:CDS | 40.0% | |
| GCAGTATGCTGATCAGATAA+TGG | + | chr3_1:76570686-76570705 | Msa0376450:CDS | 40.0% | |
| !! | GATAATGGGACTATTCATCC+GGG | + | chr3_1:76570701-76570720 | Msa0376450:CDS | 40.0% |
| CATTTCTACAAGCAAAGACC+CGG | - | chr3_1:76570722-76570741 | None:intergenic | 40.0% | |
| GGCAGGTATTTAGCAAAATC+AGG | - | chr3_1:76570801-76570820 | None:intergenic | 40.0% | |
| GGTACTCCTCAAAATTCTGA+AGG | - | chr3_1:76570851-76570870 | None:intergenic | 40.0% | |
| GTCATAATCCCATCACAGTA+AGG | - | chr3_1:76570939-76570958 | None:intergenic | 40.0% | |
| ACCAATGCATGAAAACAAGG+GGG | - | chr3_1:76571012-76571031 | None:intergenic | 40.0% | |
| CACCAATGCATGAAAACAAG+GGG | - | chr3_1:76571013-76571032 | None:intergenic | 40.0% | |
| GGTGATATAGCACTAGCTAT+AGG | + | chr3_1:76571029-76571048 | Msa0376450:CDS | 40.0% | |
| ! | GGGATATTAGAGGCATATTC+TGG | + | chr3_1:76571173-76571192 | Msa0376450:CDS | 40.0% |
| !! | CATATTCTGGGATCTTCCAA+GGG | + | chr3_1:76571186-76571205 | Msa0376450:CDS | 40.0% |
| GAGCATAAGGAATCAAGATC+TGG | - | chr3_1:76571232-76571251 | None:intergenic | 40.0% | |
| ATCCAAGAACTGGAGAATGT+GGG | - | chr3_1:76571255-76571274 | None:intergenic | 40.0% | |
| TATCCAAGAACTGGAGAATG+TGG | - | chr3_1:76571256-76571275 | None:intergenic | 40.0% | |
| CATGTGTCAAATTGTCTCCA+TGG | + | chr3_1:76571668-76571687 | Msa0376450:three_prime_UTR | 40.0% | |
| TACTTTCAGTTGTCTGACCA+TGG | - | chr3_1:76571688-76571707 | None:intergenic | 40.0% | |
| ATGCAAGAGTTAGTGACAAC+TGG | - | chr3_1:76571727-76571746 | None:intergenic | 40.0% | |
| ACTTAATGGTGCTCATGCAA+AGG | - | chr3_1:76571770-76571789 | None:intergenic | 40.0% | |
| CTTGAACGTACTGGACTTAA+TGG | - | chr3_1:76571784-76571803 | None:intergenic | 40.0% | |
| TGATGCATTCTTGAACGTAC+TGG | - | chr3_1:76571793-76571812 | None:intergenic | 40.0% | |
| ATGAGAGAGAAGAAGAGCGA+AGG | - | chr3_1:76567453-76567472 | None:intergenic | 45.0% | |
| GAGATCTGAAAGAGTAGCGA+GGG | - | chr3_1:76567489-76567508 | None:intergenic | 45.0% | |
| AGAGATCTGAAAGAGTAGCG+AGG | - | chr3_1:76567490-76567509 | None:intergenic | 45.0% | |
| CAGATCTCTTCTCCGATTTC+AGG | + | chr3_1:76567501-76567520 | Msa0376450:five_prime_UTR | 45.0% | |
| ATCGGCGGGTGTGAATAAAT+AGG | + | chr3_1:76567887-76567906 | Msa0376450:intron | 45.0% | |
| ! | CCTACCGATCCCGAAATTTT+AGG | - | chr3_1:76567966-76567985 | None:intergenic | 45.0% |
| CCTAAAATTTCGGGATCGGT+AGG | + | chr3_1:76567963-76567982 | Msa0376450:intron | 45.0% | |
| !!! | ACTAAGTTTTGGAGCCTTCG+AGG | + | chr3_1:76567999-76568018 | Msa0376450:intron | 45.0% |
| GTCCGTGCTTTATAGCTTCA+AGG | + | chr3_1:76568158-76568177 | Msa0376450:intron | 45.0% | |
| AGTGTGGTACGAAACAAACC+AGG | - | chr3_1:76568389-76568408 | None:intergenic | 45.0% | |
| !! | CTCTCCAATTGGTTAGTCTC+TGG | + | chr3_1:76568703-76568722 | Msa0376450:intron | 45.0% |
| GCCAATTATTCTGTGCCATC+AGG | + | chr3_1:76568852-76568871 | Msa0376450:intron | 45.0% | |
| CATCGCTATGCTATACCTGA+TGG | - | chr3_1:76568870-76568889 | None:intergenic | 45.0% | |
| CATCAGGTATAGCATAGCGA+TGG | + | chr3_1:76568868-76568887 | Msa0376450:intron | 45.0% | |
| CATAGCGATGGAAGTTACTC+AGG | + | chr3_1:76568880-76568899 | Msa0376450:exon | 45.0% | |
| CTTACGTACAGTTCCGTCAA+TGG | - | chr3_1:76568924-76568943 | None:intergenic | 45.0% | |
| TTTCAGGAGCAAAACCTTCC+TGG | + | chr3_1:76568968-76568987 | Msa0376450:CDS | 45.0% | |
| GCAAAACCTTCCTGGTTTCT+TGG | + | chr3_1:76568976-76568995 | Msa0376450:CDS | 45.0% | |
| GAAAGAGAGACCAAGAAACC+AGG | - | chr3_1:76568989-76569008 | None:intergenic | 45.0% | |
| GGTTTCTTGGTCTCTCTTTC+TGG | + | chr3_1:76568989-76569008 | Msa0376450:CDS | 45.0% | |
| !! | ACCAGTTGATAGCCGAAAGT+TGG | + | chr3_1:76569033-76569052 | Msa0376450:CDS | 45.0% |
| ! | CCGCTTTCTGTTTTCATCCT+TGG | - | chr3_1:76569089-76569108 | None:intergenic | 45.0% |
| GAAGCAAACATGCCTTAACC+TGG | - | chr3_1:76569156-76569175 | None:intergenic | 45.0% | |
| TTGAGCTTCCTCAGAAACAG+TGG | + | chr3_1:76569245-76569264 | Msa0376450:CDS | 45.0% | |
| AAACAGTGGCCTGAACTGAT+AGG | + | chr3_1:76569259-76569278 | Msa0376450:CDS | 45.0% | |
| ! | CAAGCAACTTTGGAGACTCT+GGG | + | chr3_1:76569325-76569344 | Msa0376450:CDS | 45.0% |
| ! | AAGCAACTTTGGAGACTCTG+GGG | + | chr3_1:76569326-76569345 | Msa0376450:CDS | 45.0% |
| CTTGATCAACAACCTCATGG+GGG | - | chr3_1:76569369-76569388 | None:intergenic | 45.0% | |
| GGTCTTGATCAACAACCTCA+TGG | - | chr3_1:76569372-76569391 | None:intergenic | 45.0% | |
| !! | GAGAGCATTATACAATGCCC+TGG | - | chr3_1:76569473-76569492 | None:intergenic | 45.0% |
| TAATGCTCTCGAATTTGCGC+AGG | + | chr3_1:76569483-76569502 | Msa0376450:CDS | 45.0% | |
| CACATAATACATGGCCGCAA+TGG | - | chr3_1:76569617-76569636 | None:intergenic | 45.0% | |
| ACATCACAGCAAAGGCTGTT+AGG | + | chr3_1:76569668-76569687 | Msa0376450:CDS | 45.0% | |
| AAAGGCTGTTAGGAGTGATG+AGG | + | chr3_1:76569678-76569697 | Msa0376450:CDS | 45.0% | |
| CTCTCCAAGCCATTGAATTC+TGG | + | chr3_1:76569710-76569729 | Msa0376450:CDS | 45.0% | |
| GAATATGTGGGTGATACCAC+TGG | + | chr3_1:76569769-76569788 | Msa0376450:CDS | 45.0% | |
| ATATGTGGGTGATACCACTG+GGG | + | chr3_1:76569771-76569790 | Msa0376450:CDS | 45.0% | |
| GAGGATCAAGATCTGGATGA+AGG | + | chr3_1:76569880-76569899 | Msa0376450:CDS | 45.0% | |
| ! | AAGATCTGGATGAAGGTGCA+TGG | + | chr3_1:76569887-76569906 | Msa0376450:CDS | 45.0% |
| GCATGGAATATTGCAATGGC+AGG | + | chr3_1:76569904-76569923 | Msa0376450:CDS | 45.0% | |
| TGGAATATTGCAATGGCAGG+TGG | + | chr3_1:76569907-76569926 | Msa0376450:CDS | 45.0% | |
| GGTTTAGTTGCTCGTACTAC+TGG | + | chr3_1:76569940-76569959 | Msa0376450:CDS | 45.0% | |
| CAAACCAGATTGGAGACAGA+GGG | + | chr3_1:76570011-76570030 | Msa0376450:CDS | 45.0% | |
| !! | TGCATTTGGCTCTATCTTGG+AGG | + | chr3_1:76570047-76570066 | Msa0376450:CDS | 45.0% |
| !! | GCATTTGGCTCTATCTTGGA+GGG | + | chr3_1:76570048-76570067 | Msa0376450:CDS | 45.0% |
| !! | CATTTGGCTCTATCTTGGAG+GGG | + | chr3_1:76570049-76570068 | Msa0376450:CDS | 45.0% |
| !! | GAGCACTGAGCATAAATGGT+AGG | - | chr3_1:76570113-76570132 | None:intergenic | 45.0% |
| TATGCTCAGTGCTCTAGTGA+AGG | + | chr3_1:76570119-76570138 | Msa0376450:CDS | 45.0% | |
| AGTTCTCCTTCAGAGCATGA+AGG | + | chr3_1:76570263-76570282 | Msa0376450:CDS | 45.0% | |
| GTCCCTAATGTTGCTGAGAA+AGG | + | chr3_1:76570288-76570307 | Msa0376450:CDS | 45.0% | |
| CAGCCTTTCTCAGCAACATT+AGG | - | chr3_1:76570294-76570313 | None:intergenic | 45.0% | |
| AATGTTGCTGAGAAAGGCTG+TGG | + | chr3_1:76570294-76570313 | Msa0376450:CDS | 45.0% | |
| AAAATCAGGGCCTATCGCAT+AGG | - | chr3_1:76570787-76570806 | None:intergenic | 45.0% | |
| CAACAGTTACGGCACAAACT+TGG | - | chr3_1:76570872-76570891 | None:intergenic | 45.0% | |
| CAAGTTTGTGCCGTAACTGT+TGG | + | chr3_1:76570870-76570889 | Msa0376450:CDS | 45.0% | |
| CCAATGCATGAAAACAAGGG+GGG | - | chr3_1:76571011-76571030 | None:intergenic | 45.0% | |
| CAAGTCAAAGCCTGATGTGT+GGG | - | chr3_1:76571120-76571139 | None:intergenic | 45.0% | |
| !! | GCATATTCTGGGATCTTCCA+AGG | + | chr3_1:76571185-76571204 | Msa0376450:CDS | 45.0% |
| TCCAAGAACTGGAGAATGTG+GGG | - | chr3_1:76571254-76571273 | None:intergenic | 45.0% | |
| !! | AAAACAGCCATTGGTGTCGT+TGG | + | chr3_1:76571407-76571426 | Msa0376450:CDS | 45.0% |
| TAGATCTCCAACGACACCAA+TGG | - | chr3_1:76571417-76571436 | None:intergenic | 45.0% | |
| GGAGATCTAGCTGATACACT+TGG | + | chr3_1:76571428-76571447 | Msa0376450:CDS | 45.0% | |
| GATACACTTGGAAGCAATGC+TGG | + | chr3_1:76571440-76571459 | Msa0376450:CDS | 45.0% | |
| TGCAAAGGTCAGTGATGCAT+TGG | - | chr3_1:76571755-76571774 | None:intergenic | 45.0% | |
| CAATCGCAAGTAGAGATGCC+AGG | - | chr3_1:76567407-76567426 | None:intergenic | 50.0% | |
| AGGAAGGAAGGAAGGAACAG+CGG | - | chr3_1:76567433-76567452 | None:intergenic | 50.0% | |
| AAGAGCGAAGGAAGGAAGGA+AGG | - | chr3_1:76567441-76567460 | None:intergenic | 50.0% | |
| GAAGAAGAGCGAAGGAAGGA+AGG | - | chr3_1:76567445-76567464 | None:intergenic | 50.0% | |
| GAGAGAAGAAGAGCGAAGGA+AGG | - | chr3_1:76567449-76567468 | None:intergenic | 50.0% | |
| TCTGAAAGAGTAGCGAGGGA+AGG | - | chr3_1:76567485-76567504 | None:intergenic | 50.0% | |
| GTGGTAGACAGAGATATCGG+CGG | + | chr3_1:76567872-76567891 | Msa0376450:intron | 50.0% | |
| TGGTAGACAGAGATATCGGC+GGG | + | chr3_1:76567873-76567892 | Msa0376450:intron | 50.0% | |
| GGCGGGTGTGAATAAATAGG+TGG | + | chr3_1:76567890-76567909 | Msa0376450:intron | 50.0% | |
| GATCGGTAGGGTAACGTAGT+AGG | + | chr3_1:76567976-76567995 | Msa0376450:intron | 50.0% | |
| CTGACACACGTACGTTGAAC+CGG | - | chr3_1:76568104-76568123 | None:intergenic | 50.0% | |
| GAGAGACCAAGAAACCAGGA+AGG | - | chr3_1:76568985-76569004 | None:intergenic | 50.0% | |
| GCCAACTTTCGGCTATCAAC+TGG | - | chr3_1:76569037-76569056 | None:intergenic | 50.0% | |
| !! | GTTGATAGCCGAAAGTTGGC+AGG | + | chr3_1:76569037-76569056 | Msa0376450:CDS | 50.0% |
| ! | AGCGGGAATTGGTTCAGAGA+TGG | + | chr3_1:76569104-76569123 | Msa0376450:CDS | 50.0% |
| GTCATTAGACACTGCAGCGA+AGG | + | chr3_1:76569129-76569148 | Msa0376450:CDS | 50.0% | |
| CCTCTCTTGTACTTGACGCT+CGG | + | chr3_1:76569185-76569204 | Msa0376450:CDS | 50.0% | |
| !! | AGTTCAGGCCACTGTTTCTG+AGG | - | chr3_1:76569256-76569275 | None:intergenic | 50.0% |
| GCTTGACATGAGCAGGAACT+TGG | - | chr3_1:76569306-76569325 | None:intergenic | 50.0% | |
| GTTGCTTGCTTGACATGAGC+AGG | - | chr3_1:76569313-76569332 | None:intergenic | 50.0% | |
| ! | GCAAGCAACTTTGGAGACTC+TGG | + | chr3_1:76569324-76569343 | Msa0376450:CDS | 50.0% |
| !! | GACTCTGGGGTATTTGTGTG+AGG | + | chr3_1:76569339-76569358 | Msa0376450:CDS | 50.0% |
| ! | GAAGTTGGCTCCTTACATCC+AGG | + | chr3_1:76569636-76569655 | Msa0376450:CDS | 50.0% |
| ! | TCAATGGCTTGGAGAGCAAC+AGG | - | chr3_1:76569706-76569725 | None:intergenic | 50.0% |
| AGGTATATCAGAGTCCCCAG+TGG | - | chr3_1:76569788-76569807 | None:intergenic | 50.0% | |
| CCTCTGTCTCCAATCTGGTT+TGG | - | chr3_1:76570013-76570032 | None:intergenic | 50.0% | |
| CCAAACCAGATTGGAGACAG+AGG | + | chr3_1:76570010-76570029 | Msa0376450:CDS | 50.0% | |
| GAAGCAGCGACGTATGCATT+TGG | + | chr3_1:76570033-76570052 | Msa0376450:CDS | 50.0% | |
| GGTAGGGCGTGATTAACAAG+AGG | - | chr3_1:76570096-76570115 | None:intergenic | 50.0% | |
| AGACACCACTGCTTGGACTT+TGG | + | chr3_1:76570161-76570180 | Msa0376450:CDS | 50.0% | |
| GACACCACTGCTTGGACTTT+GGG | + | chr3_1:76570162-76570181 | Msa0376450:CDS | 50.0% | |
| ACACCACTGCTTGGACTTTG+GGG | + | chr3_1:76570163-76570182 | Msa0376450:CDS | 50.0% | |
| GGACATCCTTCATGCTCTGA+AGG | - | chr3_1:76570272-76570291 | None:intergenic | 50.0% | |
| ACCCTGGGCGAGAAAATACA+GGG | - | chr3_1:76570322-76570341 | None:intergenic | 50.0% | |
| AACCCTGGGCGAGAAAATAC+AGG | - | chr3_1:76570323-76570342 | None:intergenic | 50.0% | |
| ! | TTTTCTCGCCCAGGGTTATG+AGG | + | chr3_1:76570326-76570345 | Msa0376450:CDS | 50.0% |
| TCCCACATCCTCATAACCCT+GGG | - | chr3_1:76570337-76570356 | None:intergenic | 50.0% | |
| TTCCCACATCCTCATAACCC+TGG | - | chr3_1:76570338-76570357 | None:intergenic | 50.0% | |
| TCTGTGGGTGACAGTGAGAA+GGG | - | chr3_1:76570403-76570422 | None:intergenic | 50.0% | |
| CTGTCAAGCACCCACAAAGA+AGG | - | chr3_1:76570617-76570636 | None:intergenic | 50.0% | |
| TAGAAATGCCACTGCCCATG+AGG | + | chr3_1:76570734-76570753 | Msa0376450:CDS | 50.0% | |
| AAGGGCTCCAATAGCTAGCA+TGG | - | chr3_1:76570763-76570782 | None:intergenic | 50.0% | |
| GCCGTAACTGTTGGTGTAGT+CGG | + | chr3_1:76570879-76570898 | Msa0376450:CDS | 50.0% | |
| GCCGACTACACCAACAGTTA+CGG | - | chr3_1:76570883-76570902 | None:intergenic | 50.0% | |
| TGTAGTCGGCGACATATGCA+GGG | + | chr3_1:76570893-76570912 | Msa0376450:CDS | 50.0% | |
| !!! | CCCCCCTTGTTTTCATGCAT+TGG | + | chr3_1:76571008-76571027 | Msa0376450:CDS | 50.0% |
| CCAAGTCAAAGCCTGATGTG+TGG | - | chr3_1:76571121-76571140 | None:intergenic | 50.0% | |
| ! | CCACACATCAGGCTTTGACT+TGG | + | chr3_1:76571118-76571137 | Msa0376450:CDS | 50.0% |
| ! | TGGAGAATGTGGGGAGCATA+AGG | - | chr3_1:76571245-76571264 | None:intergenic | 50.0% |
| TCCCCACATTCTCCAGTTCT+TGG | + | chr3_1:76571250-76571269 | Msa0376450:CDS | 50.0% | |
| ! | AGCACGATTGATGGCCAACT+TGG | - | chr3_1:76571558-76571577 | None:intergenic | 50.0% |
| !! | TCGGTGCTACATAGCCTCGA+AGG | - | chr3_1:76568016-76568035 | None:intergenic | 55.0% |
| AGTGTCGTGTCCAGTGTCCA+TGG | + | chr3_1:76568122-76568141 | Msa0376450:intron | 55.0% | |
| AATGCGGACACCATGGACAC+TGG | - | chr3_1:76568135-76568154 | None:intergenic | 55.0% | |
| GGACACAAATGCGGACACCA+TGG | - | chr3_1:76568142-76568161 | None:intergenic | 55.0% | |
| CCGAGCGTCAAGTACAAGAG+AGG | - | chr3_1:76569188-76569207 | None:intergenic | 55.0% | |
| !! | ATGTCAGACTTGCTGCTGCC+AGG | + | chr3_1:76569452-76569471 | Msa0376450:CDS | 55.0% |
| !! | TGTCAGACTTGCTGCTGCCA+GGG | + | chr3_1:76569453-76569472 | Msa0376450:CDS | 55.0% |
| ATGGCAGGTGGTACATGCCT+TGG | + | chr3_1:76569919-76569938 | Msa0376450:CDS | 55.0% | |
| GCTTCCCTCTGTCTCCAATC+TGG | - | chr3_1:76570018-76570037 | None:intergenic | 55.0% | |
| ! | AGCCCTGTATTTTCTCGCCC+AGG | + | chr3_1:76570317-76570336 | Msa0376450:CDS | 55.0% |
| ! | GCCCTGTATTTTCTCGCCCA+GGG | + | chr3_1:76570318-76570337 | Msa0376450:CDS | 55.0% |
| GCCCAGGGTTATGAGGATGT+GGG | + | chr3_1:76570333-76570352 | Msa0376450:CDS | 55.0% | |
| CTCTGTGGGTGACAGTGAGA+AGG | - | chr3_1:76570404-76570423 | None:intergenic | 55.0% | |
| TCTCACTGTCACCCACAGAG+AGG | + | chr3_1:76570404-76570423 | Msa0376450:CDS | 55.0% | |
| CACCCACAGAGAGGATGCTA+CGG | + | chr3_1:76570413-76570432 | Msa0376450:CDS | 55.0% | |
| CTCCGTAGCATCCTCTCTGT+GGG | - | chr3_1:76570418-76570437 | None:intergenic | 55.0% | |
| ACTCCGTAGCATCCTCTCTG+TGG | - | chr3_1:76570419-76570438 | None:intergenic | 55.0% | |
| GAGAGGATGCTACGGAGTCA+CGG | + | chr3_1:76570421-76570440 | Msa0376450:CDS | 55.0% | |
| AAATGCCACTGCCCATGAGG+AGG | + | chr3_1:76570737-76570756 | Msa0376450:CDS | 55.0% | |
| AGCTAGCATGGCCTCCTCAT+GGG | - | chr3_1:76570751-76570770 | None:intergenic | 55.0% | |
| TAGCTAGCATGGCCTCCTCA+TGG | - | chr3_1:76570752-76570771 | None:intergenic | 55.0% | |
| GAGGAGGCCATGCTAGCTAT+TGG | + | chr3_1:76570753-76570772 | Msa0376450:CDS | 55.0% | |
| AGGGCCTATCGCATAGGCAA+GGG | - | chr3_1:76570781-76570800 | None:intergenic | 55.0% | |
| GTGTAGTCGGCGACATATGC+AGG | + | chr3_1:76570892-76570911 | Msa0376450:CDS | 55.0% | |
| !! | CGACATATGCAGGGCATTGG+AGG | + | chr3_1:76570902-76570921 | Msa0376450:CDS | 55.0% |
| ACAAGGGGGGCTTCACAGAA+CGG | - | chr3_1:76570998-76571017 | None:intergenic | 55.0% | |
| GAGATGTACGCCCACACATC+AGG | + | chr3_1:76571107-76571126 | Msa0376450:CDS | 55.0% | |
| ATCTGCCGAATGGGCCAAGT+TGG | + | chr3_1:76571541-76571560 | Msa0376450:CDS | 55.0% | |
| GATGGCCAACTTGGCCCATT+CGG | - | chr3_1:76571549-76571568 | None:intergenic | 55.0% | |
| GCATGCATTTGGGTGTGTCG+AGG | + | chr3_1:76571630-76571649 | Msa0376450:three_prime_UTR | 55.0% | |
| TGCATTTGGGTGTGTCGAGG+TGG | + | chr3_1:76571633-76571652 | Msa0376450:three_prime_UTR | 55.0% | |
| GCATTTGGGTGTGTCGAGGT+GGG | + | chr3_1:76571634-76571653 | Msa0376450:three_prime_UTR | 55.0% | |
| TGCAGCGAAGGCCCAGGTTA+AGG | + | chr3_1:76569141-76569160 | Msa0376450:CDS | 60.0% | |
| GTGTGAGGAAGTCCCCCATG+AGG | + | chr3_1:76569354-76569373 | Msa0376450:CDS | 60.0% | |
| CAGAGGGACGAGTGCAGGAA+GGG | - | chr3_1:76569833-76569852 | None:intergenic | 60.0% | |
| AACAGCAGAGGGACGAGTGC+AGG | - | chr3_1:76569838-76569857 | None:intergenic | 60.0% | |
| TGCACTCGTCCCTCTGCTGT+TGG | + | chr3_1:76569837-76569856 | Msa0376450:CDS | 60.0% | |
| ! | CCACTGCTTGGACTTTGGGG+CGG | + | chr3_1:76570166-76570185 | Msa0376450:CDS | 60.0% |
| CGCCCAGGGTTATGAGGATG+TGG | + | chr3_1:76570332-76570351 | Msa0376450:CDS | 60.0% | |
| GGAGCCCTTGCCTATGCGAT+AGG | + | chr3_1:76570774-76570793 | Msa0376450:CDS | 60.0% | |
| CAGGGCCTATCGCATAGGCA+AGG | - | chr3_1:76570782-76570801 | None:intergenic | 60.0% | |
| CGGCGACATATGCAGGGCAT+TGG | + | chr3_1:76570899-76570918 | Msa0376450:CDS | 60.0% | |
| AGACACTGCAGCGAAGGCCC+AGG | + | chr3_1:76569135-76569154 | Msa0376450:CDS | 65.0% | |
| GCAGAGGGACGAGTGCAGGA+AGG | - | chr3_1:76569834-76569853 | None:intergenic | 65.0% | |
| CCGCCCCAAAGTCCAAGCAG+TGG | - | chr3_1:76570169-76570188 | None:intergenic | 65.0% | |
| CATGGCCTCCTCATGGGCAG+TGG | - | chr3_1:76570745-76570764 | None:intergenic | 65.0% | |
| GGTGTGTCGAGGTGGGTCGT+GGG | + | chr3_1:76571641-76571660 | Msa0376450:three_prime_UTR | 65.0% | |
| GGGTGTGTCGAGGTGGGTCG+TGG | + | chr3_1:76571640-76571659 | Msa0376450:three_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 76567392 | 76571854 | 76567392 | ID=Msa0376450;Name=Msa0376450 |
| chr3_1 | mRNA | 76567392 | 76571854 | 76567392 | ID=Msa0376450-mRNA-1;Parent=Msa0376450;Name=Msa0376450-mRNA-1;_AED=0.01;_eAED=0.01;_QI=144|1|1|1|0.5|0.33|3|265|869 |
| chr3_1 | exon | 76567392 | 76567522 | 76567392 | ID=Msa0376450-mRNA-1:exon:18181;Parent=Msa0376450-mRNA-1 |
| chr3_1 | exon | 76568874 | 76571297 | 76568874 | ID=Msa0376450-mRNA-1:exon:18182;Parent=Msa0376450-mRNA-1 |
| chr3_1 | exon | 76571391 | 76571854 | 76571391 | ID=Msa0376450-mRNA-1:exon:18183;Parent=Msa0376450-mRNA-1 |
| chr3_1 | five_prime_UTR | 76567392 | 76567522 | 76567392 | ID=Msa0376450-mRNA-1:five_prime_utr;Parent=Msa0376450-mRNA-1 |
| chr3_1 | five_prime_UTR | 76568874 | 76568886 | 76568874 | ID=Msa0376450-mRNA-1:five_prime_utr;Parent=Msa0376450-mRNA-1 |
| chr3_1 | CDS | 76568887 | 76571297 | 76568887 | ID=Msa0376450-mRNA-1:cds;Parent=Msa0376450-mRNA-1 |
| chr3_1 | CDS | 76571391 | 76571589 | 76571391 | ID=Msa0376450-mRNA-1:cds;Parent=Msa0376450-mRNA-1 |
| chr3_1 | three_prime_UTR | 76571590 | 76571854 | 76571590 | ID=Msa0376450-mRNA-1:three_prime_utr;Parent=Msa0376450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
