Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0752030 | A0A396HJ24 | 97.122 | 417 | 9 | 2 | 1 | 414 | 64 | 480 | 0.0 | 824 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0752030 | Msa1026770 | 0.800070 | 1.712414e-48 | -8.615850e-47 |
| Msa0752030 | Msa1026800 | 0.807550 | 4.785587e-50 | -8.615850e-47 |
| Msa0752030 | Msa1138240 | 0.821341 | 4.251143e-53 | -8.615850e-47 |
| Msa0752030 | Msa1452090 | 0.803865 | 2.842971e-49 | -8.615850e-47 |
| Msa0131050 | Msa0752030 | 0.810700 | 1.011865e-50 | -8.615850e-47 |
| Msa0176980 | Msa0752030 | 0.823730 | 1.183340e-53 | -8.615850e-47 |
| Msa0553950 | Msa0752030 | 0.807877 | 4.077226e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0752030 | MtrunA17_Chr5g0393941 | 97.122 | 417 | 9 | 2 | 1 | 414 | 64 | 480 | 0.0 | 824 |
| Msa0752030 | MtrunA17_Chr3g0140721 | 49.781 | 456 | 179 | 10 | 1 | 414 | 1 | 448 | 1.86e-134 | 393 |
| Msa0752030 | MtrunA17_Chr6g0487371 | 42.857 | 441 | 196 | 13 | 1 | 412 | 1 | 414 | 5.92e-105 | 317 |
| Msa0752030 | MtrunA17_Chr8g0337321 | 34.590 | 451 | 219 | 14 | 1 | 413 | 1 | 413 | 2.21e-71 | 230 |
| Msa0752030 | MtrunA17_Chr8g0389691 | 49.761 | 209 | 64 | 5 | 213 | 412 | 2 | 178 | 2.44e-53 | 176 |
| Msa0752030 | MtrunA17_Chr8g0389701 | 41.481 | 135 | 73 | 4 | 66 | 196 | 27 | 159 | 1.63e-27 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0752030 | AT3G19680.1 | 50.000 | 490 | 163 | 14 | 1 | 414 | 1 | 484 | 3.52e-130 | 384 |
| Msa0752030 | AT1G50040.1 | 52.505 | 459 | 167 | 15 | 1 | 414 | 1 | 453 | 3.55e-123 | 365 |
| Msa0752030 | AT1G10020.1 | 45.319 | 470 | 184 | 10 | 1 | 412 | 1 | 455 | 4.68e-121 | 360 |
| Msa0752030 | AT4G29310.1 | 43.946 | 446 | 185 | 12 | 1 | 412 | 1 | 415 | 2.92e-114 | 341 |
| Msa0752030 | AT4G29310.2 | 44.795 | 317 | 137 | 9 | 1 | 285 | 1 | 311 | 2.26e-83 | 258 |
| Msa0752030 | AT5G17640.1 | 38.128 | 438 | 214 | 14 | 1 | 402 | 1 | 417 | 7.27e-80 | 253 |
Find 111 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGTTAGAGATTTGTGATTT+AGG | 0.171640 | 5_2:+5626426 | None:intergenic |
| CGTTAGAGATTTGTGATTTA+GGG | 0.208710 | 5_2:+5626427 | None:intergenic |
| CCAAACGGAAGCTGGGATTT+AGG | 0.285254 | 5_2:-5625691 | Msa0752030:CDS |
| TCCAACGGAGTTTGAGTAAC+CGG | 0.343106 | 5_2:+5625837 | None:intergenic |
| CCCGGTTCAGTTTCCATCAA+TGG | 0.370037 | 5_2:-5626055 | Msa0752030:CDS |
| TCAAGACCCGGGTCTGGTTC+CGG | 0.376107 | 5_2:-5625655 | Msa0752030:CDS |
| CTGCAACCGGCGAGTGTGAC+TGG | 0.377352 | 5_2:+5625781 | None:intergenic |
| ACCGGTTGCGTGTGCTTCAA+TGG | 0.380208 | 5_2:-5625989 | Msa0752030:CDS |
| TTTCCGGTTTGACGGTGAAC+CGG | 0.390430 | 5_2:-5626169 | Msa0752030:CDS |
| TCCATTGATGGAAACTGAAC+CGG | 0.392616 | 5_2:+5626054 | None:intergenic |
| AACCCGATGGTGATGGTACT+TGG | 0.396043 | 5_2:-5625894 | Msa0752030:CDS |
| TCCTTCACCTGGTTCACAAC+GGG | 0.397608 | 5_2:-5625953 | Msa0752030:CDS |
| AAAACCTGTGGACTGCATTC+CGG | 0.398056 | 5_2:+5626150 | None:intergenic |
| ATACCGGTTCGACGTTCTTC+CGG | 0.400080 | 5_2:-5625815 | Msa0752030:CDS |
| TCAAACCGGAAAATAAATCT+TGG | 0.401676 | 5_2:+5626180 | None:intergenic |
| CTTCCGTTTGGAGTGTTAAC+GGG | 0.405734 | 5_2:+5625703 | None:intergenic |
| AGCTGCTATGGATTTGAGTA+TGG | 0.413553 | 5_2:-5625479 | Msa0752030:CDS |
| TGGGATTTAGGATCCGGTTC+AGG | 0.417320 | 5_2:-5625679 | Msa0752030:CDS |
| CCAACCGTTGTGAAAAGAAC+AGG | 0.423010 | 5_2:+5626278 | None:intergenic |
| GCTTGAAGGATGAACTTTGC+CGG | 0.425992 | 5_2:+5626572 | None:intergenic |
| TGTTGCTCTTGCAGCTGCTA+TGG | 0.432619 | 5_2:-5625491 | Msa0752030:CDS |
| AGCACACGCAACCGGTGAAC+CGG | 0.433904 | 5_2:+5625996 | None:intergenic |
| CTGAATTTGCATGTGAAAAC+CGG | 0.437926 | 5_2:+5626102 | None:intergenic |
| ACCATTGAAGCACACGCAAC+CGG | 0.440718 | 5_2:+5625988 | None:intergenic |
| GGAAACTGAACCGGGTTTGA+AGG | 0.444228 | 5_2:+5626063 | None:intergenic |
| TTTACAATTGATGTAGCATC+AGG | 0.444386 | 5_2:-5625733 | Msa0752030:CDS |
| CCTAAATCCCAGCTTCCGTT+TGG | 0.449770 | 5_2:+5625691 | None:intergenic |
| GCTTCCGTTTGGAGTGTTAA+CGG | 0.458009 | 5_2:+5625702 | None:intergenic |
| GGAAGCTGGGATTTAGGATC+CGG | 0.461778 | 5_2:-5625685 | Msa0752030:CDS |
| ACACCGTTCGTTCCTTCACC+TGG | 0.465337 | 5_2:-5625964 | Msa0752030:CDS |
| TTAACACTCCAAACGGAAGC+TGG | 0.465898 | 5_2:-5625699 | Msa0752030:CDS |
| TTCACACCAACTTCCACCTC+CGG | 0.469096 | 5_2:+5625547 | None:intergenic |
| CTGTGAACTGATACTGCAAC+CGG | 0.471720 | 5_2:+5625768 | None:intergenic |
| CCCGGGTCTTGATCCTGAAC+CGG | 0.472126 | 5_2:+5625666 | None:intergenic |
| ATCTGAACCGGAACCAGACC+CGG | 0.472927 | 5_2:+5625648 | None:intergenic |
| CAGTAGCATGTGGAGCTTGA+AGG | 0.474576 | 5_2:+5626558 | None:intergenic |
| TTTAACAGTCCGAGCTGAAC+CGG | 0.475352 | 5_2:-5626205 | Msa0752030:CDS |
| TCATTCGTACGGATCTTAAT+CGG | 0.483307 | 5_2:-5626639 | Msa0752030:CDS |
| TTTCCATCAATGGATAGAAA+AGG | 0.487017 | 5_2:-5626045 | Msa0752030:CDS |
| ATTACGATACACGATTTATC+CGG | 0.490765 | 5_2:-5626015 | Msa0752030:CDS |
| ATTCCGGTTCACCGTCAAAC+CGG | 0.493752 | 5_2:+5626166 | None:intergenic |
| CATGGGGTCGACTCGAAGCT+TGG | 0.495685 | 5_2:-5625867 | Msa0752030:CDS |
| GTGATGTCGGCGAGATTTGA+CGG | 0.496053 | 5_2:-5625589 | Msa0752030:CDS |
| CTCGAAGCTTGGCGTGAACC+CGG | 0.500118 | 5_2:-5625856 | Msa0752030:CDS |
| GTGACTGGATCAGCGGTGGC+CGG | 0.500258 | 5_2:+5625796 | None:intergenic |
| TTCCAAGTACCATCACCATC+GGG | 0.502674 | 5_2:+5625892 | None:intergenic |
| AGGATGAACTTTGCCGGAGA+AGG | 0.503747 | 5_2:+5626578 | None:intergenic |
| ACTCAAACTCCGTTGGATAC+CGG | 0.505974 | 5_2:-5625831 | Msa0752030:CDS |
| TCAACTAATGTTAGATCAAG+AGG | 0.506531 | 5_2:+5626309 | None:intergenic |
| AAAGTGTAGTAAACCGGAGG+TGG | 0.509798 | 5_2:-5625560 | Msa0752030:CDS |
| TTGATAATTAACCAAGCACC+TGG | 0.518437 | 5_2:+5625916 | None:intergenic |
| TCAGGATCAAGACCCGGGTC+TGG | 0.518778 | 5_2:-5625661 | Msa0752030:CDS |
| CAAACCGGAAAATAAATCTT+GGG | 0.524651 | 5_2:+5626181 | None:intergenic |
| CGGAAAATAAATCTTGGGTC+CGG | 0.524889 | 5_2:+5626186 | None:intergenic |
| CAAGGGAGAAGTAAAACAAC+CGG | 0.526470 | 5_2:-5626121 | Msa0752030:CDS |
| ACACGATTTATCCGGTTCAC+CGG | 0.530542 | 5_2:-5626007 | Msa0752030:CDS |
| TGGCCGGAAGAACGTCGAAC+CGG | 0.534116 | 5_2:+5625812 | None:intergenic |
| CCATTGATGGAAACTGAACC+GGG | 0.538501 | 5_2:+5626055 | None:intergenic |
| TCATCAAAACCATCCTTCTC+CGG | 0.538620 | 5_2:-5626591 | Msa0752030:CDS |
| GGAACTGTTGCGACGTGGCA+AGG | 0.541832 | 5_2:+5626504 | None:intergenic |
| CCCGGTTACTCAAACTCCGT+TGG | 0.543060 | 5_2:-5625838 | Msa0752030:CDS |
| TGCAGTATCAGTTCACAGAA+TGG | 0.545387 | 5_2:-5625763 | Msa0752030:CDS |
| GAAACTGAACCGGGTTTGAA+GGG | 0.547385 | 5_2:+5626064 | None:intergenic |
| GTAAATCAAACCCAGGTGCT+TGG | 0.549731 | 5_2:-5625927 | Msa0752030:CDS |
| GCAGTGTTGAAAACGCATGA+AGG | 0.556005 | 5_2:+5626357 | None:intergenic |
| AAGGTAGCAGCGAGAGAGTG+AGG | 0.557770 | 5_2:+5626456 | None:intergenic |
| AGTAAACCGGAGGTGGAAGT+TGG | 0.559317 | 5_2:-5625553 | Msa0752030:CDS |
| TTCCTTCACCTGGTTCACAA+CGG | 0.561816 | 5_2:-5625954 | Msa0752030:CDS |
| ACTCCCGTTAACACTCCAAA+CGG | 0.562154 | 5_2:-5625706 | Msa0752030:CDS |
| TGAACTTTGCCGGAGAAGGA+TGG | 0.563927 | 5_2:+5626582 | None:intergenic |
| CCCTTGACTTGGAAAACCTG+TGG | 0.564292 | 5_2:+5626138 | None:intergenic |
| TGGATCCGTGCTCATTCGTA+CGG | 0.564550 | 5_2:-5626650 | Msa0752030:CDS |
| CCAACGGAGTTTGAGTAACC+GGG | 0.565981 | 5_2:+5625838 | None:intergenic |
| TTTCCAAGTACCATCACCAT+CGG | 0.566391 | 5_2:+5625891 | None:intergenic |
| TCTGAACCGGAACCAGACCC+GGG | 0.569477 | 5_2:+5625649 | None:intergenic |
| TCCGGTTCAGGATCAAGACC+CGG | 0.572090 | 5_2:-5625667 | Msa0752030:CDS |
| TAACACTCCAAACGGAAGCT+GGG | 0.572899 | 5_2:-5625698 | Msa0752030:CDS |
| TTACTGACCCGTTGTGAACC+AGG | 0.574571 | 5_2:+5625946 | None:intergenic |
| TGATGGTACTTGGAAACCAT+GGG | 0.577535 | 5_2:-5625884 | Msa0752030:CDS |
| ATCTTGGGTCCGGTTCAGCT+CGG | 0.582201 | 5_2:+5626196 | None:intergenic |
| CATCAATGGATAGAAAAGGT+TGG | 0.582790 | 5_2:-5626041 | Msa0752030:CDS |
| CCGGTTCAGGATCAAGACCC+GGG | 0.584337 | 5_2:-5625666 | Msa0752030:CDS |
| TTTGATTTCGCAGTAGCATG+TGG | 0.586946 | 5_2:+5626548 | None:intergenic |
| GTGATGGTACTTGGAAACCA+TGG | 0.592053 | 5_2:-5625885 | Msa0752030:CDS |
| ATTATCAAACCCGATGGTGA+TGG | 0.600303 | 5_2:-5625901 | Msa0752030:CDS |
| TTGTGATTTAGGGAAATCAA+AGG | 0.603406 | 5_2:+5626437 | None:intergenic |
| ACCCGTTGTGAACCAGGTGA+AGG | 0.606672 | 5_2:+5625952 | None:intergenic |
| TGGTTAATTATCAAACCCGA+TGG | 0.611258 | 5_2:-5625907 | Msa0752030:CDS |
| TGAACCGGAATGCAGTCCAC+AGG | 0.623479 | 5_2:-5626154 | Msa0752030:CDS |
| TACTGCGAAATCAAACTCAA+AGG | 0.623956 | 5_2:-5626540 | Msa0752030:CDS |
| AGAAATTACGAAAAGAGTTG+CGG | 0.624516 | 5_2:-5625435 | Msa0752030:CDS |
| GTTGTTGTTGAGAGTGAGAG+CGG | 0.631679 | 5_2:+5626254 | None:intergenic |
| CAAGCTTCGAGTCGACCCCA+TGG | 0.631720 | 5_2:+5625868 | None:intergenic |
| AGGTAGCAGCGAGAGAGTGA+GGG | 0.638529 | 5_2:+5626457 | None:intergenic |
| GGCGAGTGTGACTGGATCAG+CGG | 0.640369 | 5_2:+5625789 | None:intergenic |
| GTTTCTGATTCTGATACTAG+AGG | 0.642324 | 5_2:+5626483 | None:intergenic |
| GAGTGTGACTGGATCAGCGG+TGG | 0.643291 | 5_2:+5625792 | None:intergenic |
| AACGTCGAACCGGTATCCAA+CGG | 0.651013 | 5_2:+5625822 | None:intergenic |
| TTCAACACTGCAAAACTCGT+AGG | 0.651845 | 5_2:-5626345 | Msa0752030:CDS |
| AAGATCCGTACGAATGAGCA+CGG | 0.652835 | 5_2:+5626645 | None:intergenic |
| GCTGATCCAGTCACACTCGC+CGG | 0.659941 | 5_2:-5625787 | Msa0752030:CDS |
| TGATAATTAACCAAGCACCT+GGG | 0.663225 | 5_2:+5625917 | None:intergenic |
| CAACCGTTGTGAAAAGAACA+GGG | 0.670576 | 5_2:+5626279 | None:intergenic |
| GCTCTCACTCTCAACAACAA+CGG | 0.681209 | 5_2:-5626252 | Msa0752030:CDS |
| GAACCAGGTGAAGGAACGAA+CGG | 0.681706 | 5_2:+5625961 | None:intergenic |
| AGTATCAGTTCACAGAATGG+TGG | 0.683678 | 5_2:-5625760 | Msa0752030:CDS |
| CTAGAGGAACTGTTGCGACG+TGG | 0.686510 | 5_2:+5626499 | None:intergenic |
| CGGGTCAGTAAATCAAACCC+AGG | 0.691115 | 5_2:-5625934 | Msa0752030:CDS |
| ACTGTTGCGACGTGGCAAGG+TGG | 0.702049 | 5_2:+5626507 | None:intergenic |
| TGTGAAGCACGTGACATGCA+CGG | 0.711455 | 5_2:-5625530 | Msa0752030:CDS |
| GATGGTACTTGGAAACCATG+GGG | 0.759321 | 5_2:-5625883 | Msa0752030:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTGTGTTAGTTTTGAAAA+CGG | + | chr5_2:5625703-5625722 | None:intergenic | 20.0% |
| !!! | ATTTGTGTTAGTTTTGAAAA+CGG | + | chr5_2:5625703-5625722 | None:intergenic | 20.0% |
| !! | TGAAAAAAAGTGTAGTAAAC+CGG | - | chr5_2:5626514-5626533 | Msa0752030:CDS | 25.0% |
| !! | TGAAAAAAAGTGTAGTAAAC+CGG | - | chr5_2:5626514-5626533 | Msa0752030:CDS | 25.0% |
| !! | ATGATGGTGATTTTATTGCA+AGG | + | chr5_2:5625470-5625489 | None:intergenic | 30.0% |
| TTGTGATTTAGGGAAATCAA+AGG | + | chr5_2:5625646-5625665 | None:intergenic | 30.0% | |
| CGTTAGAGATTTGTGATTTA+GGG | + | chr5_2:5625656-5625675 | None:intergenic | 30.0% | |
| ACGTTAGAGATTTGTGATTT+AGG | + | chr5_2:5625657-5625676 | None:intergenic | 30.0% | |
| TCAACTAATGTTAGATCAAG+AGG | + | chr5_2:5625774-5625793 | None:intergenic | 30.0% | |
| AACAACAACGGAAAAAATAC+TGG | - | chr5_2:5625840-5625859 | Msa0752030:CDS | 30.0% | |
| CAAACCGGAAAATAAATCTT+GGG | + | chr5_2:5625902-5625921 | None:intergenic | 30.0% | |
| TCAAACCGGAAAATAAATCT+TGG | + | chr5_2:5625903-5625922 | None:intergenic | 30.0% | |
| !! | AGATTTATTTTCCGGTTTGA+CGG | - | chr5_2:5625903-5625922 | Msa0752030:CDS | 30.0% |
| TTTCCATCAATGGATAGAAA+AGG | - | chr5_2:5626035-5626054 | Msa0752030:CDS | 30.0% | |
| ATTACGATACACGATTTATC+CGG | - | chr5_2:5626065-5626084 | Msa0752030:CDS | 30.0% | |
| TTTACAATTGATGTAGCATC+AGG | - | chr5_2:5626347-5626366 | Msa0752030:CDS | 30.0% | |
| ! | GAGAATCAGTTTTTGTATAG+CGG | - | chr5_2:5626464-5626483 | Msa0752030:CDS | 30.0% |
| AGAAATTACGAAAAGAGTTG+CGG | - | chr5_2:5626645-5626664 | Msa0752030:CDS | 30.0% | |
| !! | ATGATGGTGATTTTATTGCA+AGG | + | chr5_2:5625470-5625489 | None:intergenic | 30.0% |
| TTGTGATTTAGGGAAATCAA+AGG | + | chr5_2:5625646-5625665 | None:intergenic | 30.0% | |
| CGTTAGAGATTTGTGATTTA+GGG | + | chr5_2:5625656-5625675 | None:intergenic | 30.0% | |
| ACGTTAGAGATTTGTGATTT+AGG | + | chr5_2:5625657-5625676 | None:intergenic | 30.0% | |
| TCAACTAATGTTAGATCAAG+AGG | + | chr5_2:5625774-5625793 | None:intergenic | 30.0% | |
| AACAACAACGGAAAAAATAC+TGG | - | chr5_2:5625840-5625859 | Msa0752030:CDS | 30.0% | |
| CAAACCGGAAAATAAATCTT+GGG | + | chr5_2:5625902-5625921 | None:intergenic | 30.0% | |
| TCAAACCGGAAAATAAATCT+TGG | + | chr5_2:5625903-5625922 | None:intergenic | 30.0% | |
| !! | AGATTTATTTTCCGGTTTGA+CGG | - | chr5_2:5625903-5625922 | Msa0752030:CDS | 30.0% |
| TTTCCATCAATGGATAGAAA+AGG | - | chr5_2:5626035-5626054 | Msa0752030:CDS | 30.0% | |
| ATTACGATACACGATTTATC+CGG | - | chr5_2:5626065-5626084 | Msa0752030:CDS | 30.0% | |
| TTTACAATTGATGTAGCATC+AGG | - | chr5_2:5626347-5626366 | Msa0752030:CDS | 30.0% | |
| ! | GAGAATCAGTTTTTGTATAG+CGG | - | chr5_2:5626464-5626483 | Msa0752030:CDS | 30.0% |
| AGAAATTACGAAAAGAGTTG+CGG | - | chr5_2:5626645-5626664 | Msa0752030:CDS | 30.0% | |
| TCATTCGTACGGATCTTAAT+CGG | - | chr5_2:5625441-5625460 | Msa0752030:CDS | 35.0% | |
| !!! | AAGGATGGTTTTGATGATGA+TGG | + | chr5_2:5625486-5625505 | None:intergenic | 35.0% |
| TACTGCGAAATCAAACTCAA+AGG | - | chr5_2:5625540-5625559 | Msa0752030:CDS | 35.0% | |
| GTTTCTGATTCTGATACTAG+AGG | + | chr5_2:5625600-5625619 | None:intergenic | 35.0% | |
| !! | AAACGGAGATTTTGATGAGA+GGG | + | chr5_2:5625686-5625705 | None:intergenic | 35.0% |
| !! | AAAACGGAGATTTTGATGAG+AGG | + | chr5_2:5625687-5625706 | None:intergenic | 35.0% |
| CTGAATTTGCATGTGAAAAC+CGG | + | chr5_2:5625981-5626000 | None:intergenic | 35.0% | |
| ! | CAACCTTTTCTATCCATTGA+TGG | + | chr5_2:5626041-5626060 | None:intergenic | 35.0% |
| CATCAATGGATAGAAAAGGT+TGG | - | chr5_2:5626039-5626058 | Msa0752030:CDS | 35.0% | |
| TGATAATTAACCAAGCACCT+GGG | + | chr5_2:5626166-5626185 | None:intergenic | 35.0% | |
| ! | TTGATAATTAACCAAGCACC+TGG | + | chr5_2:5626167-5626186 | None:intergenic | 35.0% |
| TGGTTAATTATCAAACCCGA+TGG | - | chr5_2:5626173-5626192 | Msa0752030:CDS | 35.0% | |
| ! | TTCCGGTTCAGATTTTTCAT+TGG | - | chr5_2:5626442-5626461 | Msa0752030:CDS | 35.0% |
| CTCCAATGAAAAATCTGAAC+CGG | + | chr5_2:5626447-5626466 | None:intergenic | 35.0% | |
| ! | AAAAAAGTGTAGTAAACCGG+AGG | - | chr5_2:5626517-5626536 | Msa0752030:CDS | 35.0% |
| TCATTCGTACGGATCTTAAT+CGG | - | chr5_2:5625441-5625460 | Msa0752030:CDS | 35.0% | |
| !!! | AAGGATGGTTTTGATGATGA+TGG | + | chr5_2:5625486-5625505 | None:intergenic | 35.0% |
| TACTGCGAAATCAAACTCAA+AGG | - | chr5_2:5625540-5625559 | Msa0752030:CDS | 35.0% | |
| GTTTCTGATTCTGATACTAG+AGG | + | chr5_2:5625600-5625619 | None:intergenic | 35.0% | |
| !! | AAACGGAGATTTTGATGAGA+GGG | + | chr5_2:5625686-5625705 | None:intergenic | 35.0% |
| !! | AAAACGGAGATTTTGATGAG+AGG | + | chr5_2:5625687-5625706 | None:intergenic | 35.0% |
| CTGAATTTGCATGTGAAAAC+CGG | + | chr5_2:5625981-5626000 | None:intergenic | 35.0% | |
| ! | CAACCTTTTCTATCCATTGA+TGG | + | chr5_2:5626041-5626060 | None:intergenic | 35.0% |
| CATCAATGGATAGAAAAGGT+TGG | - | chr5_2:5626039-5626058 | Msa0752030:CDS | 35.0% | |
| TGATAATTAACCAAGCACCT+GGG | + | chr5_2:5626166-5626185 | None:intergenic | 35.0% | |
| ! | TTGATAATTAACCAAGCACC+TGG | + | chr5_2:5626167-5626186 | None:intergenic | 35.0% |
| TGGTTAATTATCAAACCCGA+TGG | - | chr5_2:5626173-5626192 | Msa0752030:CDS | 35.0% | |
| ! | TTCCGGTTCAGATTTTTCAT+TGG | - | chr5_2:5626442-5626461 | Msa0752030:CDS | 35.0% |
| CTCCAATGAAAAATCTGAAC+CGG | + | chr5_2:5626447-5626466 | None:intergenic | 35.0% | |
| ! | AAAAAAGTGTAGTAAACCGG+AGG | - | chr5_2:5626517-5626536 | Msa0752030:CDS | 35.0% |
| TCATCAAAACCATCCTTCTC+CGG | - | chr5_2:5625489-5625508 | Msa0752030:CDS | 40.0% | |
| ! | TTTGATTTCGCAGTAGCATG+TGG | + | chr5_2:5625535-5625554 | None:intergenic | 40.0% |
| TTCAACACTGCAAAACTCGT+AGG | - | chr5_2:5625735-5625754 | Msa0752030:CDS | 40.0% | |
| CAACCGTTGTGAAAAGAACA+GGG | + | chr5_2:5625804-5625823 | None:intergenic | 40.0% | |
| CGGAAAATAAATCTTGGGTC+CGG | + | chr5_2:5625897-5625916 | None:intergenic | 40.0% | |
| !! | CGGACCCAAGATTTATTTTC+CGG | - | chr5_2:5625895-5625914 | Msa0752030:CDS | 40.0% |
| ! | GTTTTACTTCTCCCTTGACT+TGG | + | chr5_2:5625956-5625975 | None:intergenic | 40.0% |
| CAAGGGAGAAGTAAAACAAC+CGG | - | chr5_2:5625959-5625978 | Msa0752030:CDS | 40.0% | |
| AGACAAAAACCCTTCAAACC+CGG | - | chr5_2:5626007-5626026 | Msa0752030:CDS | 40.0% | |
| TCCATTGATGGAAACTGAAC+CGG | + | chr5_2:5626029-5626048 | None:intergenic | 40.0% | |
| ATTATCAAACCCGATGGTGA+TGG | - | chr5_2:5626179-5626198 | Msa0752030:CDS | 40.0% | |
| TTTCCAAGTACCATCACCAT+CGG | + | chr5_2:5626192-5626211 | None:intergenic | 40.0% | |
| TGATGGTACTTGGAAACCAT+GGG | - | chr5_2:5626196-5626215 | Msa0752030:CDS | 40.0% | |
| TGCAGTATCAGTTCACAGAA+TGG | - | chr5_2:5626317-5626336 | Msa0752030:CDS | 40.0% | |
| AGTATCAGTTCACAGAATGG+TGG | - | chr5_2:5626320-5626339 | Msa0752030:CDS | 40.0% | |
| !! | GTATAGCGGTTTTGTGATGT+CGG | - | chr5_2:5626478-5626497 | Msa0752030:CDS | 40.0% |
| AGCTGCTATGGATTTGAGTA+TGG | - | chr5_2:5626601-5626620 | Msa0752030:CDS | 40.0% | |
| TCATCAAAACCATCCTTCTC+CGG | - | chr5_2:5625489-5625508 | Msa0752030:CDS | 40.0% | |
| ! | TTTGATTTCGCAGTAGCATG+TGG | + | chr5_2:5625535-5625554 | None:intergenic | 40.0% |
| TTCAACACTGCAAAACTCGT+AGG | - | chr5_2:5625735-5625754 | Msa0752030:CDS | 40.0% | |
| CAACCGTTGTGAAAAGAACA+GGG | + | chr5_2:5625804-5625823 | None:intergenic | 40.0% | |
| CGGAAAATAAATCTTGGGTC+CGG | + | chr5_2:5625897-5625916 | None:intergenic | 40.0% | |
| !! | CGGACCCAAGATTTATTTTC+CGG | - | chr5_2:5625895-5625914 | Msa0752030:CDS | 40.0% |
| ! | GTTTTACTTCTCCCTTGACT+TGG | + | chr5_2:5625956-5625975 | None:intergenic | 40.0% |
| CAAGGGAGAAGTAAAACAAC+CGG | - | chr5_2:5625959-5625978 | Msa0752030:CDS | 40.0% | |
| AGACAAAAACCCTTCAAACC+CGG | - | chr5_2:5626007-5626026 | Msa0752030:CDS | 40.0% | |
| TCCATTGATGGAAACTGAAC+CGG | + | chr5_2:5626029-5626048 | None:intergenic | 40.0% | |
| ATTATCAAACCCGATGGTGA+TGG | - | chr5_2:5626179-5626198 | Msa0752030:CDS | 40.0% | |
| TTTCCAAGTACCATCACCAT+CGG | + | chr5_2:5626192-5626211 | None:intergenic | 40.0% | |
| TGATGGTACTTGGAAACCAT+GGG | - | chr5_2:5626196-5626215 | Msa0752030:CDS | 40.0% | |
| TGCAGTATCAGTTCACAGAA+TGG | - | chr5_2:5626317-5626336 | Msa0752030:CDS | 40.0% | |
| AGTATCAGTTCACAGAATGG+TGG | - | chr5_2:5626320-5626339 | Msa0752030:CDS | 40.0% | |
| !! | GTATAGCGGTTTTGTGATGT+CGG | - | chr5_2:5626478-5626497 | Msa0752030:CDS | 40.0% |
| AGCTGCTATGGATTTGAGTA+TGG | - | chr5_2:5626601-5626620 | Msa0752030:CDS | 40.0% | |
| AAGATCCGTACGAATGAGCA+CGG | + | chr5_2:5625438-5625457 | None:intergenic | 45.0% | |
| GCTTGAAGGATGAACTTTGC+CGG | + | chr5_2:5625511-5625530 | None:intergenic | 45.0% | |
| ! | GCAGTGTTGAAAACGCATGA+AGG | + | chr5_2:5625726-5625745 | None:intergenic | 45.0% |
| ! | CGACCCTGTTCTTTTCACAA+CGG | - | chr5_2:5625798-5625817 | Msa0752030:CDS | 45.0% |
| CCAACCGTTGTGAAAAGAAC+AGG | + | chr5_2:5625805-5625824 | None:intergenic | 45.0% | |
| ! | CCTGTTCTTTTCACAACGGT+TGG | - | chr5_2:5625802-5625821 | Msa0752030:CDS | 45.0% |
| ! | GTTGTTGTTGAGAGTGAGAG+CGG | + | chr5_2:5625829-5625848 | None:intergenic | 45.0% |
| GCTCTCACTCTCAACAACAA+CGG | - | chr5_2:5625828-5625847 | Msa0752030:CDS | 45.0% | |
| TTTAACAGTCCGAGCTGAAC+CGG | - | chr5_2:5625875-5625894 | Msa0752030:CDS | 45.0% | |
| ! | AAAACCTGTGGACTGCATTC+CGG | + | chr5_2:5625933-5625952 | None:intergenic | 45.0% |
| ! | TCCACAGGTTTTCCAAGTCA+AGG | - | chr5_2:5625941-5625960 | Msa0752030:CDS | 45.0% |
| ! | CCACAGGTTTTCCAAGTCAA+GGG | - | chr5_2:5625942-5625961 | Msa0752030:CDS | 45.0% |
| GAAACTGAACCGGGTTTGAA+GGG | + | chr5_2:5626019-5626038 | None:intergenic | 45.0% | |
| CCATTGATGGAAACTGAACC+GGG | + | chr5_2:5626028-5626047 | None:intergenic | 45.0% | |
| ACACGATTTATCCGGTTCAC+CGG | - | chr5_2:5626073-5626092 | Msa0752030:CDS | 45.0% | |
| TTCCTTCACCTGGTTCACAA+CGG | - | chr5_2:5626126-5626145 | Msa0752030:CDS | 45.0% | |
| GTAAATCAAACCCAGGTGCT+TGG | - | chr5_2:5626153-5626172 | Msa0752030:CDS | 45.0% | |
| TTCCAAGTACCATCACCATC+GGG | + | chr5_2:5626191-5626210 | None:intergenic | 45.0% | |
| GTGATGGTACTTGGAAACCA+TGG | - | chr5_2:5626195-5626214 | Msa0752030:CDS | 45.0% | |
| GATGGTACTTGGAAACCATG+GGG | - | chr5_2:5626197-5626216 | Msa0752030:CDS | 45.0% | |
| TCCAACGGAGTTTGAGTAAC+CGG | + | chr5_2:5626246-5626265 | None:intergenic | 45.0% | |
| ACTCAAACTCCGTTGGATAC+CGG | - | chr5_2:5626249-5626268 | Msa0752030:CDS | 45.0% | |
| CTGTGAACTGATACTGCAAC+CGG | + | chr5_2:5626315-5626334 | None:intergenic | 45.0% | |
| ACTCCCGTTAACACTCCAAA+CGG | - | chr5_2:5626374-5626393 | Msa0752030:CDS | 45.0% | |
| ! | CTTCCGTTTGGAGTGTTAAC+GGG | + | chr5_2:5626380-5626399 | None:intergenic | 45.0% |
| ! | GCTTCCGTTTGGAGTGTTAA+CGG | + | chr5_2:5626381-5626400 | None:intergenic | 45.0% |
| TTAACACTCCAAACGGAAGC+TGG | - | chr5_2:5626381-5626400 | Msa0752030:CDS | 45.0% | |
| TAACACTCCAAACGGAAGCT+GGG | - | chr5_2:5626382-5626401 | Msa0752030:CDS | 45.0% | |
| AAAGTGTAGTAAACCGGAGG+TGG | - | chr5_2:5626520-5626539 | Msa0752030:CDS | 45.0% | |
| AAGATCCGTACGAATGAGCA+CGG | + | chr5_2:5625438-5625457 | None:intergenic | 45.0% | |
| GCTTGAAGGATGAACTTTGC+CGG | + | chr5_2:5625511-5625530 | None:intergenic | 45.0% | |
| ! | GCAGTGTTGAAAACGCATGA+AGG | + | chr5_2:5625726-5625745 | None:intergenic | 45.0% |
| ! | CGACCCTGTTCTTTTCACAA+CGG | - | chr5_2:5625798-5625817 | Msa0752030:CDS | 45.0% |
| CCAACCGTTGTGAAAAGAAC+AGG | + | chr5_2:5625805-5625824 | None:intergenic | 45.0% | |
| ! | CCTGTTCTTTTCACAACGGT+TGG | - | chr5_2:5625802-5625821 | Msa0752030:CDS | 45.0% |
| ! | GTTGTTGTTGAGAGTGAGAG+CGG | + | chr5_2:5625829-5625848 | None:intergenic | 45.0% |
| GCTCTCACTCTCAACAACAA+CGG | - | chr5_2:5625828-5625847 | Msa0752030:CDS | 45.0% | |
| TTTAACAGTCCGAGCTGAAC+CGG | - | chr5_2:5625875-5625894 | Msa0752030:CDS | 45.0% | |
| ! | AAAACCTGTGGACTGCATTC+CGG | + | chr5_2:5625933-5625952 | None:intergenic | 45.0% |
| ! | TCCACAGGTTTTCCAAGTCA+AGG | - | chr5_2:5625941-5625960 | Msa0752030:CDS | 45.0% |
| ! | CCACAGGTTTTCCAAGTCAA+GGG | - | chr5_2:5625942-5625961 | Msa0752030:CDS | 45.0% |
| GAAACTGAACCGGGTTTGAA+GGG | + | chr5_2:5626019-5626038 | None:intergenic | 45.0% | |
| CCATTGATGGAAACTGAACC+GGG | + | chr5_2:5626028-5626047 | None:intergenic | 45.0% | |
| ACACGATTTATCCGGTTCAC+CGG | - | chr5_2:5626073-5626092 | Msa0752030:CDS | 45.0% | |
| TTCCTTCACCTGGTTCACAA+CGG | - | chr5_2:5626126-5626145 | Msa0752030:CDS | 45.0% | |
| GTAAATCAAACCCAGGTGCT+TGG | - | chr5_2:5626153-5626172 | Msa0752030:CDS | 45.0% | |
| TTCCAAGTACCATCACCATC+GGG | + | chr5_2:5626191-5626210 | None:intergenic | 45.0% | |
| GTGATGGTACTTGGAAACCA+TGG | - | chr5_2:5626195-5626214 | Msa0752030:CDS | 45.0% | |
| GATGGTACTTGGAAACCATG+GGG | - | chr5_2:5626197-5626216 | Msa0752030:CDS | 45.0% | |
| TCCAACGGAGTTTGAGTAAC+CGG | + | chr5_2:5626246-5626265 | None:intergenic | 45.0% | |
| ACTCAAACTCCGTTGGATAC+CGG | - | chr5_2:5626249-5626268 | Msa0752030:CDS | 45.0% | |
| CTGTGAACTGATACTGCAAC+CGG | + | chr5_2:5626315-5626334 | None:intergenic | 45.0% | |
| ACTCCCGTTAACACTCCAAA+CGG | - | chr5_2:5626374-5626393 | Msa0752030:CDS | 45.0% | |
| ! | CTTCCGTTTGGAGTGTTAAC+GGG | + | chr5_2:5626380-5626399 | None:intergenic | 45.0% |
| ! | GCTTCCGTTTGGAGTGTTAA+CGG | + | chr5_2:5626381-5626400 | None:intergenic | 45.0% |
| TTAACACTCCAAACGGAAGC+TGG | - | chr5_2:5626381-5626400 | Msa0752030:CDS | 45.0% | |
| TAACACTCCAAACGGAAGCT+GGG | - | chr5_2:5626382-5626401 | Msa0752030:CDS | 45.0% | |
| AAAGTGTAGTAAACCGGAGG+TGG | - | chr5_2:5626520-5626539 | Msa0752030:CDS | 45.0% | |
| TGGATCCGTGCTCATTCGTA+CGG | - | chr5_2:5625430-5625449 | Msa0752030:CDS | 50.0% | |
| TGAACTTTGCCGGAGAAGGA+TGG | + | chr5_2:5625501-5625520 | None:intergenic | 50.0% | |
| AGGATGAACTTTGCCGGAGA+AGG | + | chr5_2:5625505-5625524 | None:intergenic | 50.0% | |
| CAGTAGCATGTGGAGCTTGA+AGG | + | chr5_2:5625525-5625544 | None:intergenic | 50.0% | |
| ! | TTTCCGGTTTGACGGTGAAC+CGG | - | chr5_2:5625911-5625930 | Msa0752030:CDS | 50.0% |
| ATTCCGGTTCACCGTCAAAC+CGG | + | chr5_2:5625917-5625936 | None:intergenic | 50.0% | |
| !! | CCCTTGACTTGGAAAACCTG+TGG | + | chr5_2:5625945-5625964 | None:intergenic | 50.0% |
| GGAAACTGAACCGGGTTTGA+AGG | + | chr5_2:5626020-5626039 | None:intergenic | 50.0% | |
| CCCGGTTCAGTTTCCATCAA+TGG | - | chr5_2:5626025-5626044 | Msa0752030:CDS | 50.0% | |
| ACCATTGAAGCACACGCAAC+CGG | + | chr5_2:5626095-5626114 | None:intergenic | 50.0% | |
| GAACCAGGTGAAGGAACGAA+CGG | + | chr5_2:5626122-5626141 | None:intergenic | 50.0% | |
| TCCTTCACCTGGTTCACAAC+GGG | - | chr5_2:5626127-5626146 | Msa0752030:CDS | 50.0% | |
| TTACTGACCCGTTGTGAACC+AGG | + | chr5_2:5626137-5626156 | None:intergenic | 50.0% | |
| CGGGTCAGTAAATCAAACCC+AGG | - | chr5_2:5626146-5626165 | Msa0752030:CDS | 50.0% | |
| !! | AACCCGATGGTGATGGTACT+TGG | - | chr5_2:5626186-5626205 | Msa0752030:CDS | 50.0% |
| CCAACGGAGTTTGAGTAACC+GGG | + | chr5_2:5626245-5626264 | None:intergenic | 50.0% | |
| AACGTCGAACCGGTATCCAA+CGG | + | chr5_2:5626261-5626280 | None:intergenic | 50.0% | |
| !! | ATACCGGTTCGACGTTCTTC+CGG | - | chr5_2:5626265-5626284 | Msa0752030:CDS | 50.0% |
| CCTAAATCCCAGCTTCCGTT+TGG | + | chr5_2:5626392-5626411 | None:intergenic | 50.0% | |
| CCAAACGGAAGCTGGGATTT+AGG | - | chr5_2:5626389-5626408 | Msa0752030:CDS | 50.0% | |
| ! | GGAAGCTGGGATTTAGGATC+CGG | - | chr5_2:5626395-5626414 | Msa0752030:CDS | 50.0% |
| ! | TGGGATTTAGGATCCGGTTC+AGG | - | chr5_2:5626401-5626420 | Msa0752030:CDS | 50.0% |
| GTGATGTCGGCGAGATTTGA+CGG | - | chr5_2:5626491-5626510 | Msa0752030:CDS | 50.0% | |
| AGTAAACCGGAGGTGGAAGT+TGG | - | chr5_2:5626527-5626546 | Msa0752030:CDS | 50.0% | |
| TTCACACCAACTTCCACCTC+CGG | + | chr5_2:5626536-5626555 | None:intergenic | 50.0% | |
| TGTGAAGCACGTGACATGCA+CGG | - | chr5_2:5626550-5626569 | Msa0752030:CDS | 50.0% | |
| TGTTGCTCTTGCAGCTGCTA+TGG | - | chr5_2:5626589-5626608 | Msa0752030:CDS | 50.0% | |
| TGGATCCGTGCTCATTCGTA+CGG | - | chr5_2:5625430-5625449 | Msa0752030:CDS | 50.0% | |
| TGAACTTTGCCGGAGAAGGA+TGG | + | chr5_2:5625501-5625520 | None:intergenic | 50.0% | |
| AGGATGAACTTTGCCGGAGA+AGG | + | chr5_2:5625505-5625524 | None:intergenic | 50.0% | |
| CAGTAGCATGTGGAGCTTGA+AGG | + | chr5_2:5625525-5625544 | None:intergenic | 50.0% | |
| ! | TTTCCGGTTTGACGGTGAAC+CGG | - | chr5_2:5625911-5625930 | Msa0752030:CDS | 50.0% |
| ATTCCGGTTCACCGTCAAAC+CGG | + | chr5_2:5625917-5625936 | None:intergenic | 50.0% | |
| !! | CCCTTGACTTGGAAAACCTG+TGG | + | chr5_2:5625945-5625964 | None:intergenic | 50.0% |
| GGAAACTGAACCGGGTTTGA+AGG | + | chr5_2:5626020-5626039 | None:intergenic | 50.0% | |
| CCCGGTTCAGTTTCCATCAA+TGG | - | chr5_2:5626025-5626044 | Msa0752030:CDS | 50.0% | |
| ACCATTGAAGCACACGCAAC+CGG | + | chr5_2:5626095-5626114 | None:intergenic | 50.0% | |
| GAACCAGGTGAAGGAACGAA+CGG | + | chr5_2:5626122-5626141 | None:intergenic | 50.0% | |
| TCCTTCACCTGGTTCACAAC+GGG | - | chr5_2:5626127-5626146 | Msa0752030:CDS | 50.0% | |
| TTACTGACCCGTTGTGAACC+AGG | + | chr5_2:5626137-5626156 | None:intergenic | 50.0% | |
| CGGGTCAGTAAATCAAACCC+AGG | - | chr5_2:5626146-5626165 | Msa0752030:CDS | 50.0% | |
| !! | AACCCGATGGTGATGGTACT+TGG | - | chr5_2:5626186-5626205 | Msa0752030:CDS | 50.0% |
| CCAACGGAGTTTGAGTAACC+GGG | + | chr5_2:5626245-5626264 | None:intergenic | 50.0% | |
| AACGTCGAACCGGTATCCAA+CGG | + | chr5_2:5626261-5626280 | None:intergenic | 50.0% | |
| !! | ATACCGGTTCGACGTTCTTC+CGG | - | chr5_2:5626265-5626284 | Msa0752030:CDS | 50.0% |
| CCTAAATCCCAGCTTCCGTT+TGG | + | chr5_2:5626392-5626411 | None:intergenic | 50.0% | |
| CCAAACGGAAGCTGGGATTT+AGG | - | chr5_2:5626389-5626408 | Msa0752030:CDS | 50.0% | |
| ! | GGAAGCTGGGATTTAGGATC+CGG | - | chr5_2:5626395-5626414 | Msa0752030:CDS | 50.0% |
| ! | TGGGATTTAGGATCCGGTTC+AGG | - | chr5_2:5626401-5626420 | Msa0752030:CDS | 50.0% |
| GTGATGTCGGCGAGATTTGA+CGG | - | chr5_2:5626491-5626510 | Msa0752030:CDS | 50.0% | |
| AGTAAACCGGAGGTGGAAGT+TGG | - | chr5_2:5626527-5626546 | Msa0752030:CDS | 50.0% | |
| TTCACACCAACTTCCACCTC+CGG | + | chr5_2:5626536-5626555 | None:intergenic | 50.0% | |
| TGTGAAGCACGTGACATGCA+CGG | - | chr5_2:5626550-5626569 | Msa0752030:CDS | 50.0% | |
| TGTTGCTCTTGCAGCTGCTA+TGG | - | chr5_2:5626589-5626608 | Msa0752030:CDS | 50.0% | |
| CTAGAGGAACTGTTGCGACG+TGG | + | chr5_2:5625584-5625603 | None:intergenic | 55.0% | |
| AGGTAGCAGCGAGAGAGTGA+GGG | + | chr5_2:5625626-5625645 | None:intergenic | 55.0% | |
| AAGGTAGCAGCGAGAGAGTG+AGG | + | chr5_2:5625627-5625646 | None:intergenic | 55.0% | |
| ATCTTGGGTCCGGTTCAGCT+CGG | + | chr5_2:5625887-5625906 | None:intergenic | 55.0% | |
| TGAACCGGAATGCAGTCCAC+AGG | - | chr5_2:5625926-5625945 | Msa0752030:CDS | 55.0% | |
| ACCGGTTGCGTGTGCTTCAA+TGG | - | chr5_2:5626091-5626110 | Msa0752030:CDS | 55.0% | |
| ACACCGTTCGTTCCTTCACC+TGG | - | chr5_2:5626116-5626135 | Msa0752030:CDS | 55.0% | |
| ACCCGTTGTGAACCAGGTGA+AGG | + | chr5_2:5626131-5626150 | None:intergenic | 55.0% | |
| CCCGGTTACTCAAACTCCGT+TGG | - | chr5_2:5626242-5626261 | Msa0752030:CDS | 55.0% | |
| TCCGGTTCAGGATCAAGACC+CGG | - | chr5_2:5626413-5626432 | Msa0752030:CDS | 55.0% | |
| ATCTGAACCGGAACCAGACC+CGG | + | chr5_2:5626435-5626454 | None:intergenic | 55.0% | |
| CTAGAGGAACTGTTGCGACG+TGG | + | chr5_2:5625584-5625603 | None:intergenic | 55.0% | |
| AGGTAGCAGCGAGAGAGTGA+GGG | + | chr5_2:5625626-5625645 | None:intergenic | 55.0% | |
| AAGGTAGCAGCGAGAGAGTG+AGG | + | chr5_2:5625627-5625646 | None:intergenic | 55.0% | |
| ATCTTGGGTCCGGTTCAGCT+CGG | + | chr5_2:5625887-5625906 | None:intergenic | 55.0% | |
| TGAACCGGAATGCAGTCCAC+AGG | - | chr5_2:5625926-5625945 | Msa0752030:CDS | 55.0% | |
| ACCGGTTGCGTGTGCTTCAA+TGG | - | chr5_2:5626091-5626110 | Msa0752030:CDS | 55.0% | |
| ACACCGTTCGTTCCTTCACC+TGG | - | chr5_2:5626116-5626135 | Msa0752030:CDS | 55.0% | |
| ACCCGTTGTGAACCAGGTGA+AGG | + | chr5_2:5626131-5626150 | None:intergenic | 55.0% | |
| CCCGGTTACTCAAACTCCGT+TGG | - | chr5_2:5626242-5626261 | Msa0752030:CDS | 55.0% | |
| TCCGGTTCAGGATCAAGACC+CGG | - | chr5_2:5626413-5626432 | Msa0752030:CDS | 55.0% | |
| ATCTGAACCGGAACCAGACC+CGG | + | chr5_2:5626435-5626454 | None:intergenic | 55.0% | |
| ACTGTTGCGACGTGGCAAGG+TGG | + | chr5_2:5625576-5625595 | None:intergenic | 60.0% | |
| GGAACTGTTGCGACGTGGCA+AGG | + | chr5_2:5625579-5625598 | None:intergenic | 60.0% | |
| AGCACACGCAACCGGTGAAC+CGG | + | chr5_2:5626087-5626106 | None:intergenic | 60.0% | |
| CAAGCTTCGAGTCGACCCCA+TGG | + | chr5_2:5626215-5626234 | None:intergenic | 60.0% | |
| !! | CATGGGGTCGACTCGAAGCT+TGG | - | chr5_2:5626213-5626232 | Msa0752030:CDS | 60.0% |
| CTCGAAGCTTGGCGTGAACC+CGG | - | chr5_2:5626224-5626243 | Msa0752030:CDS | 60.0% | |
| TGGCCGGAAGAACGTCGAAC+CGG | + | chr5_2:5626271-5626290 | None:intergenic | 60.0% | |
| GAGTGTGACTGGATCAGCGG+TGG | + | chr5_2:5626291-5626310 | None:intergenic | 60.0% | |
| GGCGAGTGTGACTGGATCAG+CGG | + | chr5_2:5626294-5626313 | None:intergenic | 60.0% | |
| GCTGATCCAGTCACACTCGC+CGG | - | chr5_2:5626293-5626312 | Msa0752030:CDS | 60.0% | |
| CCCGGGTCTTGATCCTGAAC+CGG | + | chr5_2:5626417-5626436 | None:intergenic | 60.0% | |
| CCGGTTCAGGATCAAGACCC+GGG | - | chr5_2:5626414-5626433 | Msa0752030:CDS | 60.0% | |
| TCAGGATCAAGACCCGGGTC+TGG | - | chr5_2:5626419-5626438 | Msa0752030:CDS | 60.0% | |
| ! | TCAAGACCCGGGTCTGGTTC+CGG | - | chr5_2:5626425-5626444 | Msa0752030:CDS | 60.0% |
| TCTGAACCGGAACCAGACCC+GGG | + | chr5_2:5626434-5626453 | None:intergenic | 60.0% | |
| ACTGTTGCGACGTGGCAAGG+TGG | + | chr5_2:5625576-5625595 | None:intergenic | 60.0% | |
| GGAACTGTTGCGACGTGGCA+AGG | + | chr5_2:5625579-5625598 | None:intergenic | 60.0% | |
| AGCACACGCAACCGGTGAAC+CGG | + | chr5_2:5626087-5626106 | None:intergenic | 60.0% | |
| CAAGCTTCGAGTCGACCCCA+TGG | + | chr5_2:5626215-5626234 | None:intergenic | 60.0% | |
| !! | CATGGGGTCGACTCGAAGCT+TGG | - | chr5_2:5626213-5626232 | Msa0752030:CDS | 60.0% |
| CTCGAAGCTTGGCGTGAACC+CGG | - | chr5_2:5626224-5626243 | Msa0752030:CDS | 60.0% | |
| TGGCCGGAAGAACGTCGAAC+CGG | + | chr5_2:5626271-5626290 | None:intergenic | 60.0% | |
| GAGTGTGACTGGATCAGCGG+TGG | + | chr5_2:5626291-5626310 | None:intergenic | 60.0% | |
| GGCGAGTGTGACTGGATCAG+CGG | + | chr5_2:5626294-5626313 | None:intergenic | 60.0% | |
| GCTGATCCAGTCACACTCGC+CGG | - | chr5_2:5626293-5626312 | Msa0752030:CDS | 60.0% | |
| CCCGGGTCTTGATCCTGAAC+CGG | + | chr5_2:5626417-5626436 | None:intergenic | 60.0% | |
| CCGGTTCAGGATCAAGACCC+GGG | - | chr5_2:5626414-5626433 | Msa0752030:CDS | 60.0% | |
| TCAGGATCAAGACCCGGGTC+TGG | - | chr5_2:5626419-5626438 | Msa0752030:CDS | 60.0% | |
| ! | TCAAGACCCGGGTCTGGTTC+CGG | - | chr5_2:5626425-5626444 | Msa0752030:CDS | 60.0% |
| TCTGAACCGGAACCAGACCC+GGG | + | chr5_2:5626434-5626453 | None:intergenic | 60.0% | |
| GTGACTGGATCAGCGGTGGC+CGG | + | chr5_2:5626287-5626306 | None:intergenic | 65.0% | |
| CTGCAACCGGCGAGTGTGAC+TGG | + | chr5_2:5626302-5626321 | None:intergenic | 65.0% | |
| GTGACTGGATCAGCGGTGGC+CGG | + | chr5_2:5626287-5626306 | None:intergenic | 65.0% | |
| CTGCAACCGGCGAGTGTGAC+TGG | + | chr5_2:5626302-5626321 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 5625429 | 5626673 | 5625429 | ID=Msa0752030;Name=Msa0752030 |
| chr5_2 | mRNA | 5625429 | 5626673 | 5625429 | ID=Msa0752030-mRNA-1;Parent=Msa0752030;Name=Msa0752030-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|414 |
| chr5_2 | exon | 5625429 | 5626673 | 5625429 | ID=Msa0752030-mRNA-1:exon:2250;Parent=Msa0752030-mRNA-1 |
| chr5_2 | CDS | 5625429 | 5626673 | 5625429 | ID=Msa0752030-mRNA-1:cds;Parent=Msa0752030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
