Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1452090 | sp|Q9SCZ4|FERON_ARATH | 57.143 | 280 | 87 | 4 | 2 | 250 | 290 | 567 | 3.97e-88 | 283 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1452090 | A0A072USL6 | 78.873 | 284 | 26 | 1 | 1 | 250 | 289 | 572 | 8.83e-132 | 398 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1375060 | Msa1452090 | 0.815595 | 8.528268e-52 | -8.615850e-47 |
| Msa1392330 | Msa1452090 | 0.816070 | 6.682954e-52 | -8.615850e-47 |
| Msa1423580 | Msa1452090 | 0.853384 | 2.476232e-61 | -8.615850e-47 |
| Msa1452090 | Msa1460820 | 0.813831 | 2.097553e-51 | -8.615850e-47 |
| Msa0608050 | Msa1452090 | 0.805148 | 1.535172e-49 | -8.615850e-47 |
| Msa0608060 | Msa1452090 | 0.811226 | 7.782261e-51 | -8.615850e-47 |
| Msa0648430 | Msa1452090 | 0.813234 | 2.837979e-51 | -8.615850e-47 |
| Msa0752030 | Msa1452090 | 0.803865 | 2.842971e-49 | -8.615850e-47 |
| Msa0138810 | Msa1452090 | 0.809784 | 1.594323e-50 | -8.615850e-47 |
| Msa0222570 | Msa1452090 | 0.837961 | 3.816307e-57 | -8.615850e-47 |
| Msa0376450 | Msa1452090 | 0.847159 | 1.379721e-59 | -8.615850e-47 |
| Msa0377970 | Msa1452090 | 0.848142 | 7.398604e-60 | -8.615850e-47 |
| Msa0425120 | Msa1452090 | 0.840157 | 1.029491e-57 | -8.615850e-47 |
| Msa0427620 | Msa1452090 | 0.851593 | 8.021530e-61 | -8.615850e-47 |
| Msa0471720 | Msa1452090 | 0.848048 | 7.856387e-60 | -8.615850e-47 |
| Msa1026770 | Msa1452090 | 0.920304 | 1.515830e-87 | -8.615850e-47 |
| Msa1026800 | Msa1452090 | 0.931902 | 1.896280e-94 | -8.615850e-47 |
| Msa1098180 | Msa1452090 | 0.844565 | 6.986351e-59 | -8.615850e-47 |
| Msa0270030 | Msa1452090 | 0.819048 | 1.425297e-52 | -8.615850e-47 |
| Msa1111770 | Msa1452090 | 0.838034 | 3.654739e-57 | -8.615850e-47 |
| Msa1119250 | Msa1452090 | 0.863553 | 2.293221e-64 | -8.615850e-47 |
| Msa1119300 | Msa1452090 | 0.872983 | 2.091138e-67 | -8.615850e-47 |
| Msa1138240 | Msa1452090 | 0.852888 | 3.434843e-61 | -8.615850e-47 |
| Msa1147980 | Msa1452090 | 0.816513 | 5.318891e-52 | -8.615850e-47 |
| Msa1218320 | Msa1452090 | 0.824849 | 6.460018e-54 | -8.615850e-47 |
| Msa1218360 | Msa1452090 | 0.823248 | 1.534322e-53 | -8.615850e-47 |
| Msa0516510 | Msa1452090 | 0.850811 | 1.333756e-60 | -8.615850e-47 |
| Msa0518130 | Msa1452090 | 0.848345 | 6.503087e-60 | -8.615850e-47 |
| Msa0553950 | Msa1452090 | 0.831553 | 1.564178e-55 | -8.615850e-47 |
| Msa0967650 | Msa1452090 | 0.847684 | 9.897499e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1452090 | MtrunA17_Chr7g0245131 | 78.873 | 284 | 26 | 1 | 1 | 250 | 283 | 566 | 2.82e-133 | 398 |
| Msa1452090 | MtrunA17_Chr7g0274261 | 36.194 | 268 | 125 | 8 | 2 | 235 | 288 | 543 | 8.30e-41 | 150 |
| Msa1452090 | MtrunA17_Chr1g0190581 | 36.940 | 268 | 128 | 5 | 2 | 235 | 278 | 538 | 1.19e-40 | 149 |
| Msa1452090 | MtrunA17_Chr5g0420151 | 33.866 | 313 | 134 | 10 | 2 | 265 | 292 | 580 | 2.39e-36 | 137 |
| Msa1452090 | MtrunA17_Chr5g0420171 | 33.893 | 298 | 132 | 9 | 2 | 265 | 292 | 558 | 6.41e-36 | 135 |
| Msa1452090 | MtrunA17_Chr7g0219741 | 37.023 | 262 | 104 | 11 | 1 | 226 | 304 | 540 | 1.32e-34 | 131 |
| Msa1452090 | MtrunA17_Chr6g0455321 | 34.317 | 271 | 117 | 9 | 2 | 227 | 289 | 543 | 8.46e-33 | 127 |
| Msa1452090 | MtrunA17_Chr7g0219681 | 36.641 | 262 | 102 | 13 | 1 | 227 | 300 | 532 | 9.71e-33 | 126 |
| Msa1452090 | MtrunA17_Chr7g0219591 | 35.870 | 276 | 113 | 10 | 1 | 243 | 302 | 546 | 6.84e-31 | 120 |
| Msa1452090 | MtrunA17_Chr7g0219611 | 34.483 | 261 | 105 | 10 | 1 | 227 | 295 | 523 | 1.96e-29 | 117 |
| Msa1452090 | MtrunA17_Chr7g0219691 | 36.604 | 265 | 101 | 13 | 1 | 227 | 306 | 541 | 8.52e-29 | 115 |
| Msa1452090 | MtrunA17_Chr7g0219721 | 35.849 | 265 | 103 | 12 | 1 | 227 | 306 | 541 | 2.29e-28 | 114 |
| Msa1452090 | MtrunA17_Chr4g0025961 | 34.586 | 266 | 104 | 12 | 1 | 227 | 302 | 536 | 2.96e-28 | 114 |
| Msa1452090 | MtrunA17_Chr2g0292501 | 33.577 | 274 | 136 | 11 | 2 | 243 | 286 | 545 | 5.69e-28 | 113 |
| Msa1452090 | MtrunA17_Chr7g0219651 | 32.443 | 262 | 110 | 8 | 1 | 227 | 1299 | 1528 | 6.42e-28 | 113 |
| Msa1452090 | MtrunA17_Chr7g0219651 | 33.333 | 270 | 117 | 8 | 1 | 227 | 304 | 553 | 1.95e-27 | 111 |
| Msa1452090 | MtrunA17_Chr7g0219671 | 32.616 | 279 | 125 | 11 | 1 | 243 | 306 | 557 | 2.01e-27 | 111 |
| Msa1452090 | MtrunA17_Chr5g0420161 | 30.627 | 271 | 124 | 10 | 2 | 243 | 64 | 299 | 6.76e-27 | 109 |
| Msa1452090 | MtrunA17_Chr2g0318301 | 34.686 | 271 | 127 | 8 | 2 | 241 | 273 | 524 | 1.69e-26 | 108 |
| Msa1452090 | MtrunA17_Chr5g0420181 | 30.741 | 270 | 123 | 10 | 2 | 242 | 288 | 522 | 4.09e-26 | 107 |
| Msa1452090 | MtrunA17_Chr7g0219571 | 31.698 | 265 | 111 | 9 | 1 | 226 | 309 | 542 | 1.26e-25 | 106 |
| Msa1452090 | MtrunA17_Chr7g0219781 | 34.340 | 265 | 111 | 11 | 1 | 227 | 305 | 544 | 1.46e-25 | 105 |
| Msa1452090 | MtrunA17_Chr7g0219601 | 31.325 | 249 | 92 | 7 | 15 | 227 | 322 | 527 | 1.13e-22 | 97.4 |
| Msa1452090 | MtrunA17_Chr6g0468691 | 31.225 | 253 | 123 | 8 | 1 | 226 | 275 | 503 | 4.47e-20 | 89.7 |
| Msa1452090 | MtrunA17_Chr4g0030441 | 30.712 | 267 | 137 | 10 | 2 | 241 | 277 | 522 | 9.30e-20 | 89.0 |
| Msa1452090 | MtrunA17_Chr1g0202711 | 28.740 | 254 | 122 | 11 | 1 | 226 | 288 | 510 | 2.54e-19 | 87.8 |
| Msa1452090 | MtrunA17_Chr8g0352381 | 31.225 | 253 | 127 | 11 | 2 | 227 | 307 | 539 | 1.07e-16 | 80.1 |
| Msa1452090 | MtrunA17_Chr2g0327671 | 30.798 | 263 | 130 | 9 | 10 | 242 | 286 | 526 | 2.21e-16 | 79.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1452090 | AT3G51550.1 | 57.143 | 280 | 87 | 4 | 2 | 250 | 290 | 567 | 4.04e-89 | 283 |
| Msa1452090 | AT5G28680.1 | 37.091 | 275 | 129 | 7 | 2 | 241 | 278 | 543 | 7.22e-48 | 170 |
| Msa1452090 | AT5G28680.2 | 37.091 | 275 | 129 | 7 | 2 | 241 | 278 | 543 | 7.22e-48 | 170 |
| Msa1452090 | AT3G04690.1 | 37.175 | 269 | 122 | 9 | 2 | 235 | 277 | 533 | 7.79e-45 | 162 |
| Msa1452090 | AT5G39000.1 | 37.363 | 273 | 123 | 7 | 2 | 241 | 283 | 540 | 1.05e-38 | 144 |
| Msa1452090 | AT5G38990.1 | 36.170 | 282 | 124 | 11 | 2 | 241 | 280 | 547 | 7.84e-33 | 127 |
| Msa1452090 | AT1G30570.1 | 30.855 | 269 | 141 | 10 | 2 | 241 | 290 | 542 | 6.40e-26 | 107 |
| Msa1452090 | AT5G54380.1 | 32.721 | 272 | 139 | 9 | 2 | 241 | 273 | 532 | 1.16e-24 | 103 |
| Msa1452090 | AT5G39030.2 | 33.166 | 199 | 94 | 7 | 2 | 163 | 274 | 470 | 4.72e-21 | 93.2 |
| Msa1452090 | AT5G39030.1 | 33.166 | 199 | 94 | 7 | 2 | 163 | 280 | 476 | 4.91e-21 | 93.2 |
| Msa1452090 | AT3G46290.1 | 27.559 | 254 | 131 | 8 | 16 | 241 | 279 | 507 | 3.40e-16 | 79.0 |
| Msa1452090 | AT5G59700.1 | 27.820 | 266 | 141 | 7 | 2 | 241 | 264 | 504 | 4.39e-14 | 72.8 |
| Msa1452090 | AT5G61350.1 | 26.217 | 267 | 144 | 6 | 2 | 227 | 279 | 533 | 2.45e-13 | 70.5 |
Find 94 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGATTGCATCATAGTAAT+TGG | 0.146238 | tig0033666:-511 | None:intergenic |
| TTTGACGAATCTTTGATTCT+TGG | 0.229073 | tig0033666:+933 | Msa1452090:CDS |
| TTGATTGGGCTATTTGCTTT+TGG | 0.270519 | tig0033666:+711 | Msa1452090:CDS |
| TGGCTTCCACTTTCTCTTTA+CGG | 0.316547 | tig0033666:+792 | Msa1452090:CDS |
| GATTCTTGGTGTGGAGGATT+TGG | 0.326693 | tig0033666:+947 | Msa1452090:CDS |
| AAGGTGCCGGTGACGAAGTT+TGG | 0.329521 | tig0033666:-1083 | None:intergenic |
| CCCACGTTTAATTGCAACTT+TGG | 0.367254 | tig0033666:-1005 | None:intergenic |
| TATGTTGTATTTGCTCCCAC+TGG | 0.374253 | tig0033666:+435 | Msa1452090:CDS |
| TCCACATTCAAATGGGGTTC+CGG | 0.377632 | tig0033666:+401 | Msa1452090:CDS |
| GGATACTCAAGCTTCACTTC+TGG | 0.383366 | tig0033666:-115 | None:intergenic |
| TTTCTCATTTGCTGAAATCA+AGG | 0.390016 | tig0033666:+896 | Msa1452090:CDS |
| AGAGCATTTCAATTTCAGTT+TGG | 0.392147 | tig0033666:-1060 | None:intergenic |
| TCCTGCTGCGGTGGCCCAGT+GGG | 0.392589 | tig0033666:-450 | None:intergenic |
| CAGTGATAGTAAAGGTAATC+TGG | 0.398923 | tig0033666:+557 | Msa1452090:CDS |
| GCAATATAAGATGGTGTTCC+CGG | 0.403242 | tig0033666:-139 | None:intergenic |
| GGAATCATTGCTGGAGGTAT+TGG | 0.409414 | tig0033666:+666 | Msa1452090:CDS |
| AAGATTGCATCATAGTAATT+GGG | 0.411199 | tig0033666:-510 | None:intergenic |
| TCTGCCAAGACGAACACAAC+TGG | 0.422258 | tig0033666:+834 | Msa1452090:CDS |
| AGACTTAATTGATCCGTCAT+TGG | 0.425709 | tig0033666:+611 | Msa1452090:CDS |
| ATGGCAATATCAGCTTGAAT+TGG | 0.427766 | tig0033666:+203 | Msa1452090:CDS |
| GCTTGAATTGGAACTTGACT+TGG | 0.431485 | tig0033666:+215 | Msa1452090:CDS |
| TTTGACCTTCCACATTCAAA+TGG | 0.433871 | tig0033666:+393 | Msa1452090:CDS |
| TTGACCTTCCACATTCAAAT+GGG | 0.434504 | tig0033666:+394 | Msa1452090:CDS |
| TCTTGCACCTGGGGAGGAGG+AGG | 0.435842 | tig0033666:-591 | None:intergenic |
| GACCAACCCTCCTCCTCCCC+AGG | 0.437460 | tig0033666:+584 | Msa1452090:CDS |
| CACCTGGGGAGGAGGAGGGT+TGG | 0.439879 | tig0033666:-586 | None:intergenic |
| AAATGACGACAAAGGTTTGA+TGG | 0.441193 | tig0033666:-876 | None:intergenic |
| AGTCATACAGGAATCATTGC+TGG | 0.449120 | tig0033666:+657 | Msa1452090:CDS |
| TACTATGATGCAATCTTGAA+TGG | 0.450281 | tig0033666:+516 | Msa1452090:CDS |
| TTGGGCTTAGAAGTTGCATC+TGG | 0.456891 | tig0033666:-492 | None:intergenic |
| AATGATTCCTGTATGACTCT+TGG | 0.457273 | tig0033666:-652 | None:intergenic |
| AAAGTGAAGTCTCACAAGAT+AGG | 0.462377 | tig0033666:-263 | None:intergenic |
| TGGGAATCCACTCTCTGAGC+AGG | 0.464566 | tig0033666:+1024 | Msa1452090:CDS |
| GTTTACAAAGGAGAAATTGA+TGG | 0.467395 | tig0033666:+974 | Msa1452090:CDS |
| AGTACAAGTGAAGGGCCGTC+TGG | 0.480075 | tig0033666:+768 | Msa1452090:CDS |
| AGTAAATCCAAGAGTCATAC+AGG | 0.480177 | tig0033666:+645 | Msa1452090:CDS |
| CTGGATGCAGCGCAAGCCAC+AGG | 0.480683 | tig0033666:-473 | None:intergenic |
| CACTTCTGGATCAGCAGTCT+CGG | 0.496549 | tig0033666:-101 | None:intergenic |
| GATAGTAAAGGTAATCTGGC+AGG | 0.501043 | tig0033666:+561 | Msa1452090:CDS |
| AAGTCTTGCACCTGGGGAGG+AGG | 0.502311 | tig0033666:-594 | None:intergenic |
| ATGTTGTATTTGCTCCCACT+GGG | 0.508147 | tig0033666:+436 | Msa1452090:CDS |
| AGCCACAGGTCCTGCTGCGG+TGG | 0.510165 | tig0033666:-459 | None:intergenic |
| CGAATCTTTGATTCTTGGTG+TGG | 0.510572 | tig0033666:+938 | Msa1452090:CDS |
| ATCTTTGATTCTTGGTGTGG+AGG | 0.516574 | tig0033666:+941 | Msa1452090:CDS |
| ACTTCCAGTTGTGTTCGTCT+TGG | 0.520438 | tig0033666:-838 | None:intergenic |
| GTCCTGCTGCGGTGGCCCAG+TGG | 0.522516 | tig0033666:-451 | None:intergenic |
| ATCATTGCTGGAGGTATTGG+TGG | 0.526822 | tig0033666:+669 | Msa1452090:CDS |
| TTCAAGCTGATATTGCCATT+CGG | 0.530247 | tig0033666:-199 | None:intergenic |
| TTCAAAATCAGTGATAGTAA+AGG | 0.531042 | tig0033666:+549 | Msa1452090:CDS |
| ATCAATTAAGTCTTGCACCT+GGG | 0.531792 | tig0033666:-601 | None:intergenic |
| GTGAAGCTTGAGTATCCTCC+GGG | 0.534369 | tig0033666:+121 | Msa1452090:five_prime_UTR |
| TAATTGATCCGTCATTGGCT+AGG | 0.535412 | tig0033666:+616 | Msa1452090:CDS |
| AAAGATTCTAGTACAAGTGA+AGG | 0.535424 | tig0033666:+759 | Msa1452090:CDS |
| TGCTCTCCAAACTTCGTCAC+CGG | 0.539694 | tig0033666:+1077 | Msa1452090:CDS |
| GAATTACCGTAAAGAGAAAG+TGG | 0.544867 | tig0033666:-798 | None:intergenic |
| ACATCTCGTCGCCGTAGGAA+TGG | 0.550784 | tig0033666:+735 | Msa1452090:CDS |
| TACATGACGGCCAGATCGAT+GGG | 0.551907 | tig0033666:+175 | Msa1452090:exon |
| AGTGAAGCTTGAGTATCCTC+CGG | 0.552496 | tig0033666:+120 | Msa1452090:five_prime_UTR |
| TTACATGACGGCCAGATCGA+TGG | 0.558881 | tig0033666:+174 | Msa1452090:exon |
| ACAACATAATCTTTATGCAC+CGG | 0.561033 | tig0033666:-420 | None:intergenic |
| GAAAGTGGAAGCCAGCCAGA+CGG | 0.561986 | tig0033666:-783 | None:intergenic |
| CTAGATTTCCTAGCCAATGA+CGG | 0.565634 | tig0033666:-624 | None:intergenic |
| TGCACACCCTGCTCAGAGAG+TGG | 0.570219 | tig0033666:-1031 | None:intergenic |
| TTGGCACATCTCGTCGCCGT+AGG | 0.574541 | tig0033666:+730 | Msa1452090:CDS |
| TTGGTGTGGAGGATTTGGCA+AGG | 0.575931 | tig0033666:+952 | Msa1452090:CDS |
| GGCCACCGCAGCAGGACCTG+TGG | 0.576864 | tig0033666:+457 | Msa1452090:CDS |
| CTTGCACCTGGGGAGGAGGA+GGG | 0.578527 | tig0033666:-590 | None:intergenic |
| TCAATTAAGTCTTGCACCTG+GGG | 0.580510 | tig0033666:-600 | None:intergenic |
| CGATCAATGAAACAAGGTGC+CGG | 0.586850 | tig0033666:-1096 | None:intergenic |
| GCAAGCCACAGGTCCTGCTG+CGG | 0.589023 | tig0033666:-462 | None:intergenic |
| GCCAGATCGATGGGTCCGAA+TGG | 0.590185 | tig0033666:+184 | Msa1452090:CDS |
| ATTGCTGGAGGTATTGGTGG+AGG | 0.590245 | tig0033666:+672 | Msa1452090:CDS |
| ACAAAGGAGAAATTGATGGC+GGG | 0.593558 | tig0033666:+978 | Msa1452090:CDS |
| ATTAAGTCTTGCACCTGGGG+AGG | 0.595269 | tig0033666:-597 | None:intergenic |
| GAACCCCATTTGAATGTGGA+AGG | 0.602127 | tig0033666:-398 | None:intergenic |
| GGATTTGGCAAGGTTTACAA+AGG | 0.603196 | tig0033666:+962 | Msa1452090:CDS |
| GCCGTCATGTAAACATCGGA+CGG | 0.605338 | tig0033666:-163 | None:intergenic |
| GGGAATCCACTCTCTGAGCA+GGG | 0.611210 | tig0033666:+1025 | Msa1452090:CDS |
| TCGGACGGAGCAATATAAGA+TGG | 0.613976 | tig0033666:-148 | None:intergenic |
| TACAAAGGAGAAATTGATGG+CGG | 0.621558 | tig0033666:+977 | Msa1452090:CDS |
| TGACCTTCCACATTCAAATG+GGG | 0.623804 | tig0033666:+395 | Msa1452090:CDS |
| ACAAAGGTTTGATGGAAGAG+TGG | 0.624712 | tig0033666:-868 | None:intergenic |
| ACCAAAGTTGCAATTAAACG+TGG | 0.627401 | tig0033666:+1004 | Msa1452090:CDS |
| ATAGTAAAGGTAATCTGGCA+GGG | 0.627689 | tig0033666:+562 | Msa1452090:CDS |
| TCCGTCCGATGTTTACATGA+CGG | 0.633338 | tig0033666:+162 | Msa1452090:exon |
| GATCAATTAAGTCTTGCACC+TGG | 0.636333 | tig0033666:-602 | None:intergenic |
| AAGATTCTAGTACAAGTGAA+GGG | 0.650922 | tig0033666:+760 | Msa1452090:CDS |
| CCAAAGTTGCAATTAAACGT+GGG | 0.665730 | tig0033666:+1005 | Msa1452090:CDS |
| CATACAGGAATCATTGCTGG+AGG | 0.677698 | tig0033666:+660 | Msa1452090:CDS |
| TCTGGCCGTCATGTAAACAT+CGG | 0.689769 | tig0033666:-167 | None:intergenic |
| AGTATCCGATCAATGAAACA+AGG | 0.691905 | tig0033666:-1102 | None:intergenic |
| ACCGGAACCCCATTTGAATG+TGG | 0.692088 | tig0033666:-402 | None:intergenic |
| CAAATGAGAAATGACGACAA+AGG | 0.714992 | tig0033666:-884 | None:intergenic |
| ATATAAGATGGTGTTCCCGG+AGG | 0.722405 | tig0033666:-136 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AAGATTGCATCATAGTAATT+GGG | - | tig0033666:513-532 | None:intergenic | 25.0% |
| ! | TTCAAAATCAGTGATAGTAA+AGG | + | tig0033666:549-568 | Msa1452090:CDS | 25.0% |
| !!! | TTGCTTTACTACTTTTGATT+GGG | + | tig0033666:697-716 | Msa1452090:CDS | 25.0% |
| ! | AAGATTGCATCATAGTAATT+GGG | - | tig0033666:513-532 | None:intergenic | 25.0% |
| ! | TTCAAAATCAGTGATAGTAA+AGG | + | tig0033666:549-568 | Msa1452090:CDS | 25.0% |
| !!! | TTGCTTTACTACTTTTGATT+GGG | + | tig0033666:697-716 | Msa1452090:CDS | 25.0% |
| !! | TGGATTTTCTCAATTGATTC+TGG | + | tig0033666:235-254 | Msa1452090:CDS | 30.0% |
| !! | GGATTTTCTCAATTGATTCT+GGG | + | tig0033666:236-255 | Msa1452090:CDS | 30.0% |
| ACAACATAATCTTTATGCAC+CGG | - | tig0033666:423-442 | None:intergenic | 30.0% | |
| CAAGATTGCATCATAGTAAT+TGG | - | tig0033666:514-533 | None:intergenic | 30.0% | |
| TACTATGATGCAATCTTGAA+TGG | + | tig0033666:516-535 | Msa1452090:CDS | 30.0% | |
| !! | GTTGCTTTACTACTTTTGAT+TGG | + | tig0033666:696-715 | Msa1452090:CDS | 30.0% |
| ! | TAGAATCTTTTCCATTCCTA+CGG | - | tig0033666:749-768 | None:intergenic | 30.0% |
| AAAGATTCTAGTACAAGTGA+AGG | + | tig0033666:759-778 | Msa1452090:CDS | 30.0% | |
| AAGATTCTAGTACAAGTGAA+GGG | + | tig0033666:760-779 | Msa1452090:CDS | 30.0% | |
| ! | TTTCTCATTTGCTGAAATCA+AGG | + | tig0033666:896-915 | Msa1452090:CDS | 30.0% |
| TTTGACGAATCTTTGATTCT+TGG | + | tig0033666:933-952 | Msa1452090:CDS | 30.0% | |
| GTTTACAAAGGAGAAATTGA+TGG | + | tig0033666:974-993 | Msa1452090:CDS | 30.0% | |
| ! | AGAGCATTTCAATTTCAGTT+TGG | - | tig0033666:1063-1082 | None:intergenic | 30.0% |
| !! | TGGATTTTCTCAATTGATTC+TGG | + | tig0033666:235-254 | Msa1452090:CDS | 30.0% |
| !! | GGATTTTCTCAATTGATTCT+GGG | + | tig0033666:236-255 | Msa1452090:CDS | 30.0% |
| ACAACATAATCTTTATGCAC+CGG | - | tig0033666:423-442 | None:intergenic | 30.0% | |
| CAAGATTGCATCATAGTAAT+TGG | - | tig0033666:514-533 | None:intergenic | 30.0% | |
| TACTATGATGCAATCTTGAA+TGG | + | tig0033666:516-535 | Msa1452090:CDS | 30.0% | |
| !! | GTTGCTTTACTACTTTTGAT+TGG | + | tig0033666:696-715 | Msa1452090:CDS | 30.0% |
| ! | TAGAATCTTTTCCATTCCTA+CGG | - | tig0033666:749-768 | None:intergenic | 30.0% |
| AAAGATTCTAGTACAAGTGA+AGG | + | tig0033666:759-778 | Msa1452090:CDS | 30.0% | |
| AAGATTCTAGTACAAGTGAA+GGG | + | tig0033666:760-779 | Msa1452090:CDS | 30.0% | |
| ! | TTTCTCATTTGCTGAAATCA+AGG | + | tig0033666:896-915 | Msa1452090:CDS | 30.0% |
| TTTGACGAATCTTTGATTCT+TGG | + | tig0033666:933-952 | Msa1452090:CDS | 30.0% | |
| GTTTACAAAGGAGAAATTGA+TGG | + | tig0033666:974-993 | Msa1452090:CDS | 30.0% | |
| ! | AGAGCATTTCAATTTCAGTT+TGG | - | tig0033666:1063-1082 | None:intergenic | 30.0% |
| TTCAAGCTGATATTGCCATT+CGG | - | tig0033666:202-221 | None:intergenic | 35.0% | |
| ATGGCAATATCAGCTTGAAT+TGG | + | tig0033666:203-222 | Msa1452090:CDS | 35.0% | |
| AAAGTGAAGTCTCACAAGAT+AGG | - | tig0033666:266-285 | None:intergenic | 35.0% | |
| GAACACTCTTTGATTGATCT+TGG | - | tig0033666:310-329 | None:intergenic | 35.0% | |
| ! | AGAGTGTTCGATATATTCCT+CGG | + | tig0033666:321-340 | Msa1452090:intron | 35.0% |
| TTTGACCTTCCACATTCAAA+TGG | + | tig0033666:393-412 | Msa1452090:CDS | 35.0% | |
| TTGACCTTCCACATTCAAAT+GGG | + | tig0033666:394-413 | Msa1452090:CDS | 35.0% | |
| CAGTGATAGTAAAGGTAATC+TGG | + | tig0033666:557-576 | Msa1452090:CDS | 35.0% | |
| ATAGTAAAGGTAATCTGGCA+GGG | + | tig0033666:562-581 | Msa1452090:CDS | 35.0% | |
| ATCAATTAAGTCTTGCACCT+GGG | - | tig0033666:604-623 | None:intergenic | 35.0% | |
| AGACTTAATTGATCCGTCAT+TGG | + | tig0033666:611-630 | Msa1452090:CDS | 35.0% | |
| AGTAAATCCAAGAGTCATAC+AGG | + | tig0033666:645-664 | Msa1452090:CDS | 35.0% | |
| AATGATTCCTGTATGACTCT+TGG | - | tig0033666:655-674 | None:intergenic | 35.0% | |
| ! | TTGATTGGGCTATTTGCTTT+TGG | + | tig0033666:711-730 | Msa1452090:CDS | 35.0% |
| GAATTACCGTAAAGAGAAAG+TGG | - | tig0033666:801-820 | None:intergenic | 35.0% | |
| AAATGACGACAAAGGTTTGA+TGG | - | tig0033666:879-898 | None:intergenic | 35.0% | |
| CAAATGAGAAATGACGACAA+AGG | - | tig0033666:887-906 | None:intergenic | 35.0% | |
| TACAAAGGAGAAATTGATGG+CGG | + | tig0033666:977-996 | Msa1452090:CDS | 35.0% | |
| ACCAAAGTTGCAATTAAACG+TGG | + | tig0033666:1004-1023 | Msa1452090:CDS | 35.0% | |
| CCAAAGTTGCAATTAAACGT+GGG | + | tig0033666:1005-1024 | Msa1452090:CDS | 35.0% | |
| TTCAAGCTGATATTGCCATT+CGG | - | tig0033666:202-221 | None:intergenic | 35.0% | |
| ATGGCAATATCAGCTTGAAT+TGG | + | tig0033666:203-222 | Msa1452090:CDS | 35.0% | |
| AAAGTGAAGTCTCACAAGAT+AGG | - | tig0033666:266-285 | None:intergenic | 35.0% | |
| GAACACTCTTTGATTGATCT+TGG | - | tig0033666:310-329 | None:intergenic | 35.0% | |
| ! | AGAGTGTTCGATATATTCCT+CGG | + | tig0033666:321-340 | Msa1452090:intron | 35.0% |
| TTTGACCTTCCACATTCAAA+TGG | + | tig0033666:393-412 | Msa1452090:CDS | 35.0% | |
| TTGACCTTCCACATTCAAAT+GGG | + | tig0033666:394-413 | Msa1452090:CDS | 35.0% | |
| CAGTGATAGTAAAGGTAATC+TGG | + | tig0033666:557-576 | Msa1452090:CDS | 35.0% | |
| ATAGTAAAGGTAATCTGGCA+GGG | + | tig0033666:562-581 | Msa1452090:CDS | 35.0% | |
| ATCAATTAAGTCTTGCACCT+GGG | - | tig0033666:604-623 | None:intergenic | 35.0% | |
| AGACTTAATTGATCCGTCAT+TGG | + | tig0033666:611-630 | Msa1452090:CDS | 35.0% | |
| AGTAAATCCAAGAGTCATAC+AGG | + | tig0033666:645-664 | Msa1452090:CDS | 35.0% | |
| AATGATTCCTGTATGACTCT+TGG | - | tig0033666:655-674 | None:intergenic | 35.0% | |
| ! | TTGATTGGGCTATTTGCTTT+TGG | + | tig0033666:711-730 | Msa1452090:CDS | 35.0% |
| GAATTACCGTAAAGAGAAAG+TGG | - | tig0033666:801-820 | None:intergenic | 35.0% | |
| AAATGACGACAAAGGTTTGA+TGG | - | tig0033666:879-898 | None:intergenic | 35.0% | |
| CAAATGAGAAATGACGACAA+AGG | - | tig0033666:887-906 | None:intergenic | 35.0% | |
| TACAAAGGAGAAATTGATGG+CGG | + | tig0033666:977-996 | Msa1452090:CDS | 35.0% | |
| ACCAAAGTTGCAATTAAACG+TGG | + | tig0033666:1004-1023 | Msa1452090:CDS | 35.0% | |
| CCAAAGTTGCAATTAAACGT+GGG | + | tig0033666:1005-1024 | Msa1452090:CDS | 35.0% | |
| GCAATATAAGATGGTGTTCC+CGG | - | tig0033666:142-161 | None:intergenic | 40.0% | |
| GCTTGAATTGGAACTTGACT+TGG | + | tig0033666:215-234 | Msa1452090:CDS | 40.0% | |
| !! | TGTGAGACTTCACTTTTGTG+AGG | + | tig0033666:270-289 | Msa1452090:intron | 40.0% |
| GTAATCAAACTGCTGAGGAT+GGG | + | tig0033666:343-362 | Msa1452090:intron | 40.0% | |
| TAATCAAACTGCTGAGGATG+GGG | + | tig0033666:344-363 | Msa1452090:intron | 40.0% | |
| TGACCTTCCACATTCAAATG+GGG | + | tig0033666:395-414 | Msa1452090:CDS | 40.0% | |
| TATGTTGTATTTGCTCCCAC+TGG | + | tig0033666:435-454 | Msa1452090:CDS | 40.0% | |
| ATGTTGTATTTGCTCCCACT+GGG | + | tig0033666:436-455 | Msa1452090:CDS | 40.0% | |
| GATAGTAAAGGTAATCTGGC+AGG | + | tig0033666:561-580 | Msa1452090:CDS | 40.0% | |
| TCAATTAAGTCTTGCACCTG+GGG | - | tig0033666:603-622 | None:intergenic | 40.0% | |
| GATCAATTAAGTCTTGCACC+TGG | - | tig0033666:605-624 | None:intergenic | 40.0% | |
| ! | TAATTGATCCGTCATTGGCT+AGG | + | tig0033666:616-635 | Msa1452090:CDS | 40.0% |
| CTAGATTTCCTAGCCAATGA+CGG | - | tig0033666:627-646 | None:intergenic | 40.0% | |
| AGTCATACAGGAATCATTGC+TGG | + | tig0033666:657-676 | Msa1452090:CDS | 40.0% | |
| TGGCTTCCACTTTCTCTTTA+CGG | + | tig0033666:792-811 | Msa1452090:CDS | 40.0% | |
| ACAAAGGTTTGATGGAAGAG+TGG | - | tig0033666:871-890 | None:intergenic | 40.0% | |
| CGAATCTTTGATTCTTGGTG+TGG | + | tig0033666:938-957 | Msa1452090:CDS | 40.0% | |
| ! | ATCTTTGATTCTTGGTGTGG+AGG | + | tig0033666:941-960 | Msa1452090:CDS | 40.0% |
| GGATTTGGCAAGGTTTACAA+AGG | + | tig0033666:962-981 | Msa1452090:CDS | 40.0% | |
| ! | ACAAAGGAGAAATTGATGGC+GGG | + | tig0033666:978-997 | Msa1452090:CDS | 40.0% |
| CCCACGTTTAATTGCAACTT+TGG | - | tig0033666:1008-1027 | None:intergenic | 40.0% | |
| GCAATATAAGATGGTGTTCC+CGG | - | tig0033666:142-161 | None:intergenic | 40.0% | |
| GCTTGAATTGGAACTTGACT+TGG | + | tig0033666:215-234 | Msa1452090:CDS | 40.0% | |
| !! | TGTGAGACTTCACTTTTGTG+AGG | + | tig0033666:270-289 | Msa1452090:intron | 40.0% |
| GTAATCAAACTGCTGAGGAT+GGG | + | tig0033666:343-362 | Msa1452090:intron | 40.0% | |
| TAATCAAACTGCTGAGGATG+GGG | + | tig0033666:344-363 | Msa1452090:intron | 40.0% | |
| TGACCTTCCACATTCAAATG+GGG | + | tig0033666:395-414 | Msa1452090:CDS | 40.0% | |
| TATGTTGTATTTGCTCCCAC+TGG | + | tig0033666:435-454 | Msa1452090:CDS | 40.0% | |
| ATGTTGTATTTGCTCCCACT+GGG | + | tig0033666:436-455 | Msa1452090:CDS | 40.0% | |
| GATAGTAAAGGTAATCTGGC+AGG | + | tig0033666:561-580 | Msa1452090:CDS | 40.0% | |
| TCAATTAAGTCTTGCACCTG+GGG | - | tig0033666:603-622 | None:intergenic | 40.0% | |
| GATCAATTAAGTCTTGCACC+TGG | - | tig0033666:605-624 | None:intergenic | 40.0% | |
| ! | TAATTGATCCGTCATTGGCT+AGG | + | tig0033666:616-635 | Msa1452090:CDS | 40.0% |
| CTAGATTTCCTAGCCAATGA+CGG | - | tig0033666:627-646 | None:intergenic | 40.0% | |
| AGTCATACAGGAATCATTGC+TGG | + | tig0033666:657-676 | Msa1452090:CDS | 40.0% | |
| TGGCTTCCACTTTCTCTTTA+CGG | + | tig0033666:792-811 | Msa1452090:CDS | 40.0% | |
| ACAAAGGTTTGATGGAAGAG+TGG | - | tig0033666:871-890 | None:intergenic | 40.0% | |
| CGAATCTTTGATTCTTGGTG+TGG | + | tig0033666:938-957 | Msa1452090:CDS | 40.0% | |
| ! | ATCTTTGATTCTTGGTGTGG+AGG | + | tig0033666:941-960 | Msa1452090:CDS | 40.0% |
| GGATTTGGCAAGGTTTACAA+AGG | + | tig0033666:962-981 | Msa1452090:CDS | 40.0% | |
| ! | ACAAAGGAGAAATTGATGGC+GGG | + | tig0033666:978-997 | Msa1452090:CDS | 40.0% |
| CCCACGTTTAATTGCAACTT+TGG | - | tig0033666:1008-1027 | None:intergenic | 40.0% | |
| GGATACTCAAGCTTCACTTC+TGG | - | tig0033666:118-137 | None:intergenic | 45.0% | |
| AGTGAAGCTTGAGTATCCTC+CGG | + | tig0033666:120-139 | Msa1452090:five_prime_UTR | 45.0% | |
| ATATAAGATGGTGTTCCCGG+AGG | - | tig0033666:139-158 | None:intergenic | 45.0% | |
| TCGGACGGAGCAATATAAGA+TGG | - | tig0033666:151-170 | None:intergenic | 45.0% | |
| TCCGTCCGATGTTTACATGA+CGG | + | tig0033666:162-181 | Msa1452090:exon | 45.0% | |
| TCTGGCCGTCATGTAAACAT+CGG | - | tig0033666:170-189 | None:intergenic | 45.0% | |
| GGTAATCAAACTGCTGAGGA+TGG | + | tig0033666:342-361 | Msa1452090:intron | 45.0% | |
| GAACCCCATTTGAATGTGGA+AGG | - | tig0033666:401-420 | None:intergenic | 45.0% | |
| TCCACATTCAAATGGGGTTC+CGG | + | tig0033666:401-420 | Msa1452090:CDS | 45.0% | |
| TTGGGCTTAGAAGTTGCATC+TGG | - | tig0033666:495-514 | None:intergenic | 45.0% | |
| CATACAGGAATCATTGCTGG+AGG | + | tig0033666:660-679 | Msa1452090:CDS | 45.0% | |
| ! | GGAATCATTGCTGGAGGTAT+TGG | + | tig0033666:666-685 | Msa1452090:CDS | 45.0% |
| !! | ATCATTGCTGGAGGTATTGG+TGG | + | tig0033666:669-688 | Msa1452090:CDS | 45.0% |
| ACTTCCAGTTGTGTTCGTCT+TGG | - | tig0033666:841-860 | None:intergenic | 45.0% | |
| ! | GATTCTTGGTGTGGAGGATT+TGG | + | tig0033666:947-966 | Msa1452090:CDS | 45.0% |
| GGATACTCAAGCTTCACTTC+TGG | - | tig0033666:118-137 | None:intergenic | 45.0% | |
| AGTGAAGCTTGAGTATCCTC+CGG | + | tig0033666:120-139 | Msa1452090:five_prime_UTR | 45.0% | |
| ATATAAGATGGTGTTCCCGG+AGG | - | tig0033666:139-158 | None:intergenic | 45.0% | |
| TCGGACGGAGCAATATAAGA+TGG | - | tig0033666:151-170 | None:intergenic | 45.0% | |
| TCCGTCCGATGTTTACATGA+CGG | + | tig0033666:162-181 | Msa1452090:exon | 45.0% | |
| TCTGGCCGTCATGTAAACAT+CGG | - | tig0033666:170-189 | None:intergenic | 45.0% | |
| GGTAATCAAACTGCTGAGGA+TGG | + | tig0033666:342-361 | Msa1452090:intron | 45.0% | |
| GAACCCCATTTGAATGTGGA+AGG | - | tig0033666:401-420 | None:intergenic | 45.0% | |
| TCCACATTCAAATGGGGTTC+CGG | + | tig0033666:401-420 | Msa1452090:CDS | 45.0% | |
| TTGGGCTTAGAAGTTGCATC+TGG | - | tig0033666:495-514 | None:intergenic | 45.0% | |
| CATACAGGAATCATTGCTGG+AGG | + | tig0033666:660-679 | Msa1452090:CDS | 45.0% | |
| ! | GGAATCATTGCTGGAGGTAT+TGG | + | tig0033666:666-685 | Msa1452090:CDS | 45.0% |
| !! | ATCATTGCTGGAGGTATTGG+TGG | + | tig0033666:669-688 | Msa1452090:CDS | 45.0% |
| ACTTCCAGTTGTGTTCGTCT+TGG | - | tig0033666:841-860 | None:intergenic | 45.0% | |
| ! | GATTCTTGGTGTGGAGGATT+TGG | + | tig0033666:947-966 | Msa1452090:CDS | 45.0% |
| CACTTCTGGATCAGCAGTCT+CGG | - | tig0033666:104-123 | None:intergenic | 50.0% | |
| GTGAAGCTTGAGTATCCTCC+GGG | + | tig0033666:121-140 | Msa1452090:five_prime_UTR | 50.0% | |
| GCCGTCATGTAAACATCGGA+CGG | - | tig0033666:166-185 | None:intergenic | 50.0% | |
| TTACATGACGGCCAGATCGA+TGG | + | tig0033666:174-193 | Msa1452090:exon | 50.0% | |
| TACATGACGGCCAGATCGAT+GGG | + | tig0033666:175-194 | Msa1452090:exon | 50.0% | |
| CCTCAGCAGTTTGATTACCG+AGG | - | tig0033666:341-360 | None:intergenic | 50.0% | |
| CCTCGGTAATCAAACTGCTG+AGG | + | tig0033666:338-357 | Msa1452090:intron | 50.0% | |
| ATGGGGCTGATGTTATTGCC+TGG | + | tig0033666:361-380 | Msa1452090:intron | 50.0% | |
| TGGGGCTGATGTTATTGCCT+GGG | + | tig0033666:362-381 | Msa1452090:intron | 50.0% | |
| AAGGTCAAAACTACCTGCCC+AGG | - | tig0033666:382-401 | None:intergenic | 50.0% | |
| ACCGGAACCCCATTTGAATG+TGG | - | tig0033666:405-424 | None:intergenic | 50.0% | |
| ATTAAGTCTTGCACCTGGGG+AGG | - | tig0033666:600-619 | None:intergenic | 50.0% | |
| !! | ATTGCTGGAGGTATTGGTGG+AGG | + | tig0033666:672-691 | Msa1452090:CDS | 50.0% |
| TCTGCCAAGACGAACACAAC+TGG | + | tig0033666:834-853 | Msa1452090:CDS | 50.0% | |
| TTGGTGTGGAGGATTTGGCA+AGG | + | tig0033666:952-971 | Msa1452090:CDS | 50.0% | |
| TGCTCTCCAAACTTCGTCAC+CGG | + | tig0033666:1077-1096 | Msa1452090:CDS | 50.0% | |
| CACTTCTGGATCAGCAGTCT+CGG | - | tig0033666:104-123 | None:intergenic | 50.0% | |
| GTGAAGCTTGAGTATCCTCC+GGG | + | tig0033666:121-140 | Msa1452090:five_prime_UTR | 50.0% | |
| GCCGTCATGTAAACATCGGA+CGG | - | tig0033666:166-185 | None:intergenic | 50.0% | |
| TTACATGACGGCCAGATCGA+TGG | + | tig0033666:174-193 | Msa1452090:exon | 50.0% | |
| TACATGACGGCCAGATCGAT+GGG | + | tig0033666:175-194 | Msa1452090:exon | 50.0% | |
| CCTCAGCAGTTTGATTACCG+AGG | - | tig0033666:341-360 | None:intergenic | 50.0% | |
| CCTCGGTAATCAAACTGCTG+AGG | + | tig0033666:338-357 | Msa1452090:intron | 50.0% | |
| ATGGGGCTGATGTTATTGCC+TGG | + | tig0033666:361-380 | Msa1452090:intron | 50.0% | |
| TGGGGCTGATGTTATTGCCT+GGG | + | tig0033666:362-381 | Msa1452090:intron | 50.0% | |
| AAGGTCAAAACTACCTGCCC+AGG | - | tig0033666:382-401 | None:intergenic | 50.0% | |
| ACCGGAACCCCATTTGAATG+TGG | - | tig0033666:405-424 | None:intergenic | 50.0% | |
| ATTAAGTCTTGCACCTGGGG+AGG | - | tig0033666:600-619 | None:intergenic | 50.0% | |
| !! | ATTGCTGGAGGTATTGGTGG+AGG | + | tig0033666:672-691 | Msa1452090:CDS | 50.0% |
| TCTGCCAAGACGAACACAAC+TGG | + | tig0033666:834-853 | Msa1452090:CDS | 50.0% | |
| TTGGTGTGGAGGATTTGGCA+AGG | + | tig0033666:952-971 | Msa1452090:CDS | 50.0% | |
| TGCTCTCCAAACTTCGTCAC+CGG | + | tig0033666:1077-1096 | Msa1452090:CDS | 50.0% | |
| GCTGATGTTATTGCCTGGGC+AGG | + | tig0033666:366-385 | Msa1452090:intron | 55.0% | |
| ACATCTCGTCGCCGTAGGAA+TGG | + | tig0033666:735-754 | Msa1452090:CDS | 55.0% | |
| AGTACAAGTGAAGGGCCGTC+TGG | + | tig0033666:768-787 | Msa1452090:CDS | 55.0% | |
| GAAAGTGGAAGCCAGCCAGA+CGG | - | tig0033666:786-805 | None:intergenic | 55.0% | |
| TGGGAATCCACTCTCTGAGC+AGG | + | tig0033666:1024-1043 | Msa1452090:CDS | 55.0% | |
| GGGAATCCACTCTCTGAGCA+GGG | + | tig0033666:1025-1044 | Msa1452090:CDS | 55.0% | |
| !! | AAGGTGCCGGTGACGAAGTT+TGG | - | tig0033666:1086-1105 | None:intergenic | 55.0% |
| GCTGATGTTATTGCCTGGGC+AGG | + | tig0033666:366-385 | Msa1452090:intron | 55.0% | |
| ACATCTCGTCGCCGTAGGAA+TGG | + | tig0033666:735-754 | Msa1452090:CDS | 55.0% | |
| AGTACAAGTGAAGGGCCGTC+TGG | + | tig0033666:768-787 | Msa1452090:CDS | 55.0% | |
| GAAAGTGGAAGCCAGCCAGA+CGG | - | tig0033666:786-805 | None:intergenic | 55.0% | |
| TGGGAATCCACTCTCTGAGC+AGG | + | tig0033666:1024-1043 | Msa1452090:CDS | 55.0% | |
| GGGAATCCACTCTCTGAGCA+GGG | + | tig0033666:1025-1044 | Msa1452090:CDS | 55.0% | |
| !! | AAGGTGCCGGTGACGAAGTT+TGG | - | tig0033666:1086-1105 | None:intergenic | 55.0% |
| GCCAGATCGATGGGTCCGAA+TGG | + | tig0033666:184-203 | Msa1452090:CDS | 60.0% | |
| GCCATTCGGACCCATCGATC+TGG | - | tig0033666:188-207 | None:intergenic | 60.0% | |
| AAGTCTTGCACCTGGGGAGG+AGG | - | tig0033666:597-616 | None:intergenic | 60.0% | |
| TTGGCACATCTCGTCGCCGT+AGG | + | tig0033666:730-749 | Msa1452090:CDS | 60.0% | |
| TGCACACCCTGCTCAGAGAG+TGG | - | tig0033666:1034-1053 | None:intergenic | 60.0% | |
| GCCAGATCGATGGGTCCGAA+TGG | + | tig0033666:184-203 | Msa1452090:CDS | 60.0% | |
| GCCATTCGGACCCATCGATC+TGG | - | tig0033666:188-207 | None:intergenic | 60.0% | |
| AAGTCTTGCACCTGGGGAGG+AGG | - | tig0033666:597-616 | None:intergenic | 60.0% | |
| TTGGCACATCTCGTCGCCGT+AGG | + | tig0033666:730-749 | Msa1452090:CDS | 60.0% | |
| TGCACACCCTGCTCAGAGAG+TGG | - | tig0033666:1034-1053 | None:intergenic | 60.0% | |
| GCAAGCCACAGGTCCTGCTG+CGG | - | tig0033666:465-484 | None:intergenic | 65.0% | |
| CTGGATGCAGCGCAAGCCAC+AGG | - | tig0033666:476-495 | None:intergenic | 65.0% | |
| CTTGCACCTGGGGAGGAGGA+GGG | - | tig0033666:593-612 | None:intergenic | 65.0% | |
| TCTTGCACCTGGGGAGGAGG+AGG | - | tig0033666:594-613 | None:intergenic | 65.0% | |
| CAAGTGAAGGGCCGTCTGGC+TGG | + | tig0033666:772-791 | Msa1452090:CDS | 65.0% | |
| GCAAGCCACAGGTCCTGCTG+CGG | - | tig0033666:465-484 | None:intergenic | 65.0% | |
| CTGGATGCAGCGCAAGCCAC+AGG | - | tig0033666:476-495 | None:intergenic | 65.0% | |
| CTTGCACCTGGGGAGGAGGA+GGG | - | tig0033666:593-612 | None:intergenic | 65.0% | |
| TCTTGCACCTGGGGAGGAGG+AGG | - | tig0033666:594-613 | None:intergenic | 65.0% | |
| CAAGTGAAGGGCCGTCTGGC+TGG | + | tig0033666:772-791 | Msa1452090:CDS | 65.0% | |
| TCCTGCTGCGGTGGCCCAGT+GGG | - | tig0033666:453-472 | None:intergenic | 70.0% | |
| AGCCACAGGTCCTGCTGCGG+TGG | - | tig0033666:462-481 | None:intergenic | 70.0% | |
| GACCAACCCTCCTCCTCCCC+AGG | + | tig0033666:584-603 | Msa1452090:CDS | 70.0% | |
| CACCTGGGGAGGAGGAGGGT+TGG | - | tig0033666:589-608 | None:intergenic | 70.0% | |
| TCCTGCTGCGGTGGCCCAGT+GGG | - | tig0033666:453-472 | None:intergenic | 70.0% | |
| AGCCACAGGTCCTGCTGCGG+TGG | - | tig0033666:462-481 | None:intergenic | 70.0% | |
| GACCAACCCTCCTCCTCCCC+AGG | + | tig0033666:584-603 | Msa1452090:CDS | 70.0% | |
| CACCTGGGGAGGAGGAGGGT+TGG | - | tig0033666:589-608 | None:intergenic | 70.0% | |
| TCCCACTGGGCCACCGCAGC+AGG | + | tig0033666:449-468 | Msa1452090:CDS | 75.0% | |
| GTCCTGCTGCGGTGGCCCAG+TGG | - | tig0033666:454-473 | None:intergenic | 75.0% | |
| GGCCACCGCAGCAGGACCTG+TGG | + | tig0033666:457-476 | Msa1452090:CDS | 75.0% | |
| TCCCACTGGGCCACCGCAGC+AGG | + | tig0033666:449-468 | Msa1452090:CDS | 75.0% | |
| GTCCTGCTGCGGTGGCCCAG+TGG | - | tig0033666:454-473 | None:intergenic | 75.0% | |
| GGCCACCGCAGCAGGACCTG+TGG | + | tig0033666:457-476 | Msa1452090:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0033666 | gene | 98 | 1112 | 98 | ID=Msa1452090;Name=Msa1452090 |
| tig0033666 | mRNA | 98 | 1112 | 98 | ID=Msa1452090-mRNA-1;Parent=Msa1452090;Name=Msa1452090-mRNA-1;_AED=0.27;_eAED=0.34;_QI=80|0|0|1|1|0.5|2|0|278 |
| tig0033666 | exon | 98 | 286 | 98 | ID=Msa1452090-mRNA-1:exon:18399;Parent=Msa1452090-mRNA-1 |
| tig0033666 | exon | 388 | 1112 | 388 | ID=Msa1452090-mRNA-1:exon:18400;Parent=Msa1452090-mRNA-1 |
| tig0033666 | five_prime_UTR | 98 | 177 | 98 | ID=Msa1452090-mRNA-1:five_prime_utr;Parent=Msa1452090-mRNA-1 |
| tig0033666 | CDS | 178 | 286 | 178 | ID=Msa1452090-mRNA-1:cds;Parent=Msa1452090-mRNA-1 |
| tig0033666 | CDS | 388 | 1112 | 388 | ID=Msa1452090-mRNA-1:cds;Parent=Msa1452090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
