Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0754810 | XP_003611369.1 | 97.636 | 550 | 9 | 3 | 1 | 548 | 1 | 548 | 0.0 | 1108 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0754810 | sp|O23522|PLA14_ARATH | 55.347 | 533 | 196 | 10 | 25 | 548 | 18 | 517 | 0.0 | 562 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0754810 | G7JXH0 | 97.636 | 550 | 9 | 3 | 1 | 548 | 1 | 548 | 0.0 | 1108 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0754770 | Msa0754810 | 0.882437 | 1.042377e-70 | -8.615850e-47 |
| Msa0754810 | Msa0796630 | 0.854266 | 1.380394e-61 | -8.615850e-47 |
| Msa0754810 | Msa0833890 | 0.827781 | 1.294514e-54 | -8.615850e-47 |
| Msa0754810 | Msa0834180 | 0.826941 | 2.058124e-54 | -8.615850e-47 |
| Msa0754810 | Msa1388090 | 0.824656 | 7.172319e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0754810 | MtrunA17_Chr5g0399641 | 97.636 | 550 | 9 | 3 | 1 | 548 | 1 | 548 | 0.0 | 1108 |
| Msa0754810 | MtrunA17_Chr4g0055691 | 65.709 | 557 | 136 | 9 | 6 | 546 | 4 | 521 | 0.0 | 715 |
| Msa0754810 | MtrunA17_Chr7g0250561 | 47.938 | 388 | 176 | 8 | 129 | 494 | 65 | 448 | 1.22e-121 | 365 |
| Msa0754810 | MtrunA17_Chr7g0250611 | 45.553 | 371 | 169 | 8 | 133 | 494 | 75 | 421 | 5.27e-110 | 334 |
| Msa0754810 | MtrunA17_Chr4g0039301 | 38.601 | 386 | 199 | 8 | 128 | 495 | 95 | 460 | 7.33e-84 | 270 |
| Msa0754810 | MtrunA17_Chr7g0260671 | 39.267 | 382 | 195 | 11 | 133 | 495 | 74 | 437 | 3.39e-81 | 262 |
| Msa0754810 | MtrunA17_Chr7g0260681 | 39.178 | 365 | 185 | 12 | 133 | 478 | 74 | 420 | 3.64e-77 | 249 |
| Msa0754810 | MtrunA17_Chr2g0283561 | 34.974 | 386 | 192 | 9 | 133 | 495 | 39 | 388 | 2.65e-63 | 213 |
| Msa0754810 | MtrunA17_Chr7g0214711 | 32.767 | 412 | 214 | 13 | 109 | 502 | 80 | 446 | 4.84e-57 | 199 |
| Msa0754810 | MtrunA17_Chr4g0046001 | 32.905 | 389 | 195 | 11 | 133 | 497 | 13 | 359 | 7.14e-52 | 182 |
| Msa0754810 | MtrunA17_Chr4g0046011 | 33.162 | 389 | 194 | 12 | 133 | 497 | 4 | 350 | 3.28e-51 | 180 |
| Msa0754810 | MtrunA17_Chr4g0041311 | 29.500 | 400 | 218 | 10 | 129 | 495 | 24 | 392 | 4.08e-49 | 176 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0754810 | AT4G16820.1 | 55.347 | 533 | 196 | 10 | 25 | 548 | 18 | 517 | 0.0 | 562 |
| Msa0754810 | AT2G44810.2 | 50.538 | 372 | 166 | 9 | 133 | 496 | 86 | 447 | 9.40e-122 | 366 |
| Msa0754810 | AT2G44810.1 | 50.820 | 366 | 162 | 9 | 139 | 496 | 2 | 357 | 2.74e-119 | 356 |
| Msa0754810 | AT1G30370.1 | 38.072 | 415 | 218 | 10 | 124 | 519 | 105 | 499 | 8.27e-86 | 276 |
| Msa0754810 | AT1G51440.1 | 41.555 | 373 | 168 | 11 | 137 | 483 | 91 | 439 | 8.16e-83 | 268 |
| Msa0754810 | AT2G30550.1 | 39.452 | 365 | 183 | 8 | 137 | 481 | 105 | 451 | 6.62e-79 | 256 |
| Msa0754810 | AT1G06800.1 | 39.687 | 383 | 186 | 10 | 137 | 495 | 89 | 450 | 1.39e-78 | 256 |
| Msa0754810 | AT1G06800.2 | 40.437 | 366 | 173 | 10 | 137 | 478 | 89 | 433 | 2.94e-78 | 253 |
| Msa0754810 | AT2G30550.2 | 38.889 | 378 | 195 | 8 | 137 | 495 | 105 | 465 | 5.23e-78 | 255 |
| Msa0754810 | AT2G31690.1 | 36.066 | 366 | 181 | 11 | 133 | 477 | 88 | 421 | 3.45e-65 | 220 |
| Msa0754810 | AT1G05800.1 | 35.912 | 362 | 184 | 9 | 133 | 477 | 80 | 410 | 1.28e-63 | 216 |
| Msa0754810 | AT4G18550.1 | 33.094 | 417 | 209 | 11 | 133 | 517 | 19 | 397 | 2.08e-60 | 206 |
| Msa0754810 | AT4G18550.2 | 33.094 | 417 | 209 | 11 | 133 | 517 | 36 | 414 | 2.91e-60 | 206 |
| Msa0754810 | AT1G06250.1 | 31.701 | 388 | 203 | 9 | 133 | 495 | 5 | 355 | 5.61e-55 | 191 |
| Msa0754810 | AT2G42690.1 | 32.208 | 385 | 207 | 8 | 137 | 495 | 8 | 364 | 1.50e-51 | 182 |
| Msa0754810 | AT4G18550.3 | 36.207 | 290 | 152 | 8 | 133 | 399 | 36 | 315 | 1.36e-46 | 166 |
| Msa0754810 | AT1G06250.2 | 30.435 | 276 | 143 | 6 | 234 | 495 | 1 | 241 | 5.71e-33 | 128 |
Find 134 sgRNAs with CRISPR-Local
Find 308 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCAATTGGATTACCTAAA+TGG | 0.127660 | 5_2:+8528867 | Msa0754810:CDS |
| CCTCGGGTAAATCGACTAAT+TGG | 0.206931 | 5_2:-8529060 | None:intergenic |
| GAAGACGCTGTAAGCGTTTC+AGG | 0.238955 | 5_2:-8528580 | None:intergenic |
| TAACCTAGATGAGTTGTTAT+TGG | 0.251262 | 5_2:-8528369 | None:intergenic |
| CTCTTAGCATTAGCTCTAAA+TGG | 0.258178 | 5_2:-8529694 | None:intergenic |
| CGCCTTTGTAAAGTTCAATA+AGG | 0.276950 | 5_2:-8529219 | None:intergenic |
| AAAAGATGAAGGTTGTTTAA+TGG | 0.278707 | 5_2:-8528333 | None:intergenic |
| TTTCTCCCGATGATATTTCT+TGG | 0.282496 | 5_2:-8528626 | None:intergenic |
| AGAGGCTTATTTACATTTAG+TGG | 0.289753 | 5_2:+8529648 | Msa0754810:CDS |
| ATGATGATTCCAAAGGCTTT+TGG | 0.306541 | 5_2:-8528424 | None:intergenic |
| GCCACCTCATCAACCCATTT+AGG | 0.326253 | 5_2:-8528881 | None:intergenic |
| GTTGTATTGGTTGTTGAAAC+TGG | 0.332759 | 5_2:-8528454 | None:intergenic |
| ACTCAACTTTGGGCTTTGAT+TGG | 0.339758 | 5_2:-8529117 | None:intergenic |
| ACAGCCACGGGTGGCACGTT+TGG | 0.344135 | 5_2:-8529325 | None:intergenic |
| TAATTTCCTCGGCCACCAAT+AGG | 0.366166 | 5_2:-8529291 | None:intergenic |
| CGGCGAGAGGTTGTTAGATA+TGG | 0.368122 | 5_2:+8528713 | Msa0754810:CDS |
| CATAAATCCACACTCAACTT+TGG | 0.371336 | 5_2:-8529128 | None:intergenic |
| CTGTAAGCGTTTCAGGTGGC+GGG | 0.378709 | 5_2:-8528573 | None:intergenic |
| TCTTCAGCTGCTTTAATCTC+TGG | 0.381476 | 5_2:-8528542 | None:intergenic |
| AACTTCCACTTGTCTTGAAT+GGG | 0.386150 | 5_2:+8529021 | Msa0754810:CDS |
| GTTGGAAGAGAACACTCCTT+TGG | 0.394244 | 5_2:+8529534 | Msa0754810:CDS |
| CGTGTTGGTAACAGAGCCTT+TGG | 0.394565 | 5_2:+8529367 | Msa0754810:CDS |
| TAAAAGAGAGATTGCAAGAA+TGG | 0.395214 | 5_2:+8528967 | Msa0754810:CDS |
| ATAAATCCACACTCAACTTT+GGG | 0.396883 | 5_2:-8529127 | None:intergenic |
| TCTTGATAGCCAAAAGCCTT+TGG | 0.405866 | 5_2:+8528415 | Msa0754810:CDS |
| GGATGACCCAGCGTTCTAGC+TGG | 0.407435 | 5_2:+8528918 | Msa0754810:CDS |
| ATCAATTGGATTACCTAAAT+GGG | 0.408997 | 5_2:+8528868 | Msa0754810:CDS |
| GGTTGTTAGATATGGTGATT+TGG | 0.409569 | 5_2:+8528721 | Msa0754810:CDS |
| GAACTTCCACTTGTCTTGAA+TGG | 0.412888 | 5_2:+8529020 | Msa0754810:CDS |
| GACTTAACCTAGCAAAACTA+TGG | 0.417487 | 5_2:+8528519 | Msa0754810:CDS |
| CTGTATGCCACATCATCAAT+TGG | 0.418121 | 5_2:+8528854 | Msa0754810:CDS |
| TCATCAAGAGGTGTCGTTGC+CGG | 0.419070 | 5_2:+8528805 | Msa0754810:CDS |
| AATTTCCTCGGCCACCAATA+GGG | 0.421437 | 5_2:-8529290 | None:intergenic |
| ATGAGCTTGTACAAGACAAA+AGG | 0.423174 | 5_2:+8529148 | Msa0754810:CDS |
| TTGGAAGAGAACACTCCTTT+GGG | 0.425192 | 5_2:+8529535 | Msa0754810:CDS |
| GAATTAAGCATAACCGTTAC+CGG | 0.425326 | 5_2:+8529244 | Msa0754810:CDS |
| AAGAATTCCAAGGTTGTTAG+TGG | 0.426321 | 5_2:+8529499 | Msa0754810:CDS |
| ACATTTAGTGGATGGATACA+TGG | 0.441165 | 5_2:+8529660 | Msa0754810:CDS |
| AAACCAATAACAACTCATCT+AGG | 0.443716 | 5_2:+8528366 | Msa0754810:CDS |
| AATATCATGGCAGCAACGAC+TGG | 0.446528 | 5_2:+8528657 | Msa0754810:CDS |
| GATGAGGTGGCACCAGATCT+TGG | 0.447657 | 5_2:+8528893 | Msa0754810:CDS |
| CCCGCACGTGCTAATTTCCT+CGG | 0.448005 | 5_2:-8529302 | None:intergenic |
| TAGACAGGGATCCATGTCTA+TGG | 0.450095 | 5_2:+8529834 | Msa0754810:CDS |
| GTTGTTTAATGGAAGAAGAA+TGG | 0.450283 | 5_2:-8528322 | None:intergenic |
| CACTTCTTCAACAACGGACT+CGG | 0.454486 | 5_2:-8529191 | None:intergenic |
| GTGAAGGTTGTGAGCAGGTA+AGG | 0.457213 | 5_2:-8528264 | None:intergenic |
| GTAAGCGTTTCAGGTGGCGG+GGG | 0.458362 | 5_2:-8528571 | None:intergenic |
| CTTGTCTAATCTTAGTAGAC+AGG | 0.459042 | 5_2:+8529819 | Msa0754810:CDS |
| CTAGTGTCGCGCCAAGGCTA+TGG | 0.467757 | 5_2:-8529267 | None:intergenic |
| GCTGTAAGCGTTTCAGGTGG+CGG | 0.475077 | 5_2:-8528574 | None:intergenic |
| GTCTGAGTCTGAGCGTCCTC+GGG | 0.477426 | 5_2:-8529076 | None:intergenic |
| TCGCCGGAGGTTGTCATCCA+AGG | 0.480124 | 5_2:-8528696 | None:intergenic |
| GAAGGGGATGTTAGATCCCT+TGG | 0.480349 | 5_2:+8528679 | Msa0754810:CDS |
| TGGGTCATCCAACCAAGATC+TGG | 0.480411 | 5_2:-8528905 | None:intergenic |
| TGAAGAGAAGCAAAAGATGA+AGG | 0.480894 | 5_2:-8528344 | None:intergenic |
| GCTTCAGTTGTTGACATGGC+AGG | 0.485069 | 5_2:-8528776 | None:intergenic |
| AGTCTGAGTCTGAGCGTCCT+CGG | 0.485837 | 5_2:-8529077 | None:intergenic |
| TGGAGAATACTCCGCCGTCT+TGG | 0.486287 | 5_2:-8528606 | None:intergenic |
| TATTGGTTGTTGAAACTGGT+TGG | 0.487668 | 5_2:-8528450 | None:intergenic |
| AAAAGAGAGATTGCAAGAAT+GGG | 0.490721 | 5_2:+8528968 | Msa0754810:CDS |
| ACACACAAGACGTGATTACA+AGG | 0.492272 | 5_2:+8529434 | Msa0754810:CDS |
| GTTACTTTATAAGATCTCTC+CGG | 0.494331 | 5_2:-8528824 | None:intergenic |
| CAACGACACCTCTTGATGAT+GGG | 0.496077 | 5_2:-8528801 | None:intergenic |
| CTCGGGTAAATCGACTAATT+GGG | 0.499666 | 5_2:-8529059 | None:intergenic |
| AACAACTCCACTAACAACCT+TGG | 0.499945 | 5_2:-8529506 | None:intergenic |
| GCAACGACACCTCTTGATGA+TGG | 0.502309 | 5_2:-8528802 | None:intergenic |
| TGAGCTTGTACAAGACAAAA+GGG | 0.503559 | 5_2:+8529149 | Msa0754810:CDS |
| CCTTTGGGATATTCACATGT+TGG | 0.504000 | 5_2:+8529550 | Msa0754810:CDS |
| GAAATATCATCGGGAGAAAG+TGG | 0.505201 | 5_2:+8528630 | Msa0754810:CDS |
| CTTCAACAACGGACTCGGAT+AGG | 0.508893 | 5_2:-8529186 | None:intergenic |
| TCAGCATCGGGCTTCAAGTA+AGG | 0.510052 | 5_2:-8529604 | None:intergenic |
| CAACAAGCTATGTCAGCATC+GGG | 0.515189 | 5_2:-8529616 | None:intergenic |
| GCTTATTTACATTTAGTGGA+TGG | 0.516513 | 5_2:+8529652 | Msa0754810:CDS |
| GATGACCCAGCGTTCTAGCT+GGG | 0.518537 | 5_2:+8528919 | Msa0754810:CDS |
| GAAGAATGGCATCTGAAACT+AGG | 0.523536 | 5_2:-8528308 | None:intergenic |
| TTGTATACTAGTAAGGCTAA+AGG | 0.526986 | 5_2:+8529763 | Msa0754810:CDS |
| ATCCCTTGGATGACAACCTC+CGG | 0.528647 | 5_2:+8528693 | Msa0754810:CDS |
| ATCCAACCCAGCTAGAACGC+TGG | 0.529696 | 5_2:-8528925 | None:intergenic |
| GACGTGATTACAAGGGTGCC+AGG | 0.535150 | 5_2:+8529442 | Msa0754810:CDS |
| CGCGACACTAGCCCTATTGG+TGG | 0.536052 | 5_2:+8529279 | Msa0754810:CDS |
| TAGTGGAGTTGTTGATATGT+TGG | 0.537325 | 5_2:+8529516 | Msa0754810:CDS |
| TGTAAGCGTTTCAGGTGGCG+GGG | 0.538613 | 5_2:-8528572 | None:intergenic |
| ACCGTTACCGGCCATAGCCT+TGG | 0.539736 | 5_2:+8529256 | Msa0754810:CDS |
| ATGGCAGCAACGACTGGAAG+GGG | 0.541567 | 5_2:+8528663 | Msa0754810:CDS |
| TCAGACTCAGACTCAGACTC+AGG | 0.547611 | 5_2:+8529087 | Msa0754810:CDS |
| ACCTAAATGGGTTGATGAGG+TGG | 0.548455 | 5_2:+8528880 | Msa0754810:CDS |
| ACTAGCCCTATTGGTGGCCG+AGG | 0.548502 | 5_2:+8529285 | Msa0754810:CDS |
| ATTCATGAAGATGATGGACT+AGG | 0.548753 | 5_2:-8529868 | None:intergenic |
| AGGTAATCCAATTGATGATG+TGG | 0.548802 | 5_2:-8528861 | None:intergenic |
| GATATTGTGATATCTCTTCG+TGG | 0.549518 | 5_2:+8528998 | Msa0754810:CDS |
| TTCAGCCCATTCAAGACAAG+TGG | 0.553127 | 5_2:-8529026 | None:intergenic |
| CGCCGGAGGTTGTCATCCAA+GGG | 0.557417 | 5_2:-8528695 | None:intergenic |
| ACAACAAGCTATGTCAGCAT+CGG | 0.563181 | 5_2:-8529617 | None:intergenic |
| TCATGGCAGCAACGACTGGA+AGG | 0.564182 | 5_2:+8528661 | Msa0754810:CDS |
| CGCCTTATTGAACTTTACAA+AGG | 0.564214 | 5_2:+8529217 | Msa0754810:CDS |
| ATTCTCCAAGAAATATCATC+GGG | 0.566867 | 5_2:+8528621 | Msa0754810:CDS |
| AGCTTGTTGTCATGATCTAG+AGG | 0.571065 | 5_2:+8529630 | Msa0754810:CDS |
| TGATGTGGCATACAGACTCT+TGG | 0.573169 | 5_2:-8528846 | None:intergenic |
| TAAGCGTTTCAGGTGGCGGG+GGG | 0.576225 | 5_2:-8528570 | None:intergenic |
| GGGTGCTTCAGTTGTTGACA+TGG | 0.576279 | 5_2:-8528780 | None:intergenic |
| CCGAGGAAATTAGCACGTGC+GGG | 0.576932 | 5_2:+8529302 | Msa0754810:CDS |
| TCATTTGGCGGACCTCGTGT+TGG | 0.577348 | 5_2:+8529352 | Msa0754810:CDS |
| CATATCTAACAACCTCTCGC+CGG | 0.581786 | 5_2:-8528712 | None:intergenic |
| CATGGCAGCAACGACTGGAA+GGG | 0.583943 | 5_2:+8528662 | Msa0754810:CDS |
| AATTTGTGAAGGTTGTGAGC+AGG | 0.587076 | 5_2:-8528269 | None:intergenic |
| GCCAAGGCTATGGCCGGTAA+CGG | 0.591069 | 5_2:-8529257 | None:intergenic |
| TATTCTCCAAGAAATATCAT+CGG | 0.595846 | 5_2:+8528620 | Msa0754810:CDS |
| AACGACACCTCTTGATGATG+GGG | 0.596360 | 5_2:-8528800 | None:intergenic |
| AGAAAGTGGAGGGAATATCA+TGG | 0.601338 | 5_2:+8528644 | Msa0754810:CDS |
| TTGGTTGATGATGATTCCAA+AGG | 0.613659 | 5_2:-8528431 | None:intergenic |
| AGGTGGCACCAGATCTTGGT+TGG | 0.618491 | 5_2:+8528897 | Msa0754810:CDS |
| GGATGACAACCTCCGGCGAG+AGG | 0.618831 | 5_2:+8528700 | Msa0754810:CDS |
| CAGACTCAGACTCAGGCACA+AGG | 0.619166 | 5_2:+8529094 | Msa0754810:CDS |
| TTAGTGCTTGAAATTTGTGA+AGG | 0.626013 | 5_2:-8528280 | None:intergenic |
| TCAAAGCCCAAAGTTGAGTG+TGG | 0.627127 | 5_2:+8529121 | Msa0754810:CDS |
| ACAACAAGCAGCCATAGACA+TGG | 0.628855 | 5_2:-8529845 | None:intergenic |
| GCGTCGCACTTCTTCAACAA+CGG | 0.630718 | 5_2:-8529197 | None:intergenic |
| TTGTCTAATCTTAGTAGACA+GGG | 0.632883 | 5_2:+8529820 | Msa0754810:CDS |
| ATCTAACAACCTCTCGCCGG+AGG | 0.634684 | 5_2:-8528709 | None:intergenic |
| TGAAGCACCCCATCATCAAG+AGG | 0.635362 | 5_2:+8528793 | Msa0754810:CDS |
| TGTCGCGCCAAGGCTATGGC+CGG | 0.642253 | 5_2:-8529263 | None:intergenic |
| ACAGCGTCTTCTTTCCAAGA+CGG | 0.643880 | 5_2:+8528592 | Msa0754810:CDS |
| TCTGTTAATCTTAATAGACA+AGG | 0.646433 | 5_2:+8529790 | Msa0754810:CDS |
| TATCATCGGGAGAAAGTGGA+GGG | 0.648802 | 5_2:+8528634 | Msa0754810:CDS |
| ATTACCTAAATGGGTTGATG+AGG | 0.663925 | 5_2:+8528877 | Msa0754810:CDS |
| ATATCATCGGGAGAAAGTGG+AGG | 0.666029 | 5_2:+8528633 | Msa0754810:CDS |
| ATAGGGCTAGTGTCGCGCCA+AGG | 0.667674 | 5_2:-8529273 | None:intergenic |
| CCAATTAGTCGATTTACCCG+AGG | 0.667868 | 5_2:+8529060 | Msa0754810:CDS |
| GACGCTGTAAGCGTTTCAGG+TGG | 0.674999 | 5_2:-8528577 | None:intergenic |
| GCGTCTTCTTTCCAAGACGG+CGG | 0.680773 | 5_2:+8528595 | Msa0754810:CDS |
| CCAACATGTGAATATCCCAA+AGG | 0.681313 | 5_2:-8529550 | None:intergenic |
| GAGCTTGTACAAGACAAAAG+GGG | 0.708452 | 5_2:+8529150 | Msa0754810:CDS |
| CACACAAGACGTGATTACAA+GGG | 0.729372 | 5_2:+8529435 | Msa0754810:CDS |
| AAGGCTCTGTTACCAACACG+AGG | 0.743509 | 5_2:-8529364 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAAAAATTAAGAATTCCA+AGG | + | chr5_2:8529489-8529508 | Msa0754810:CDS | 20.0% |
| !! | AAAAAAGTTGTATACTAGTA+AGG | + | chr5_2:8529756-8529775 | Msa0754810:CDS | 20.0% |
| !! | AGAAAAAATTAAGAATTCCA+AGG | + | chr5_2:8529489-8529508 | Msa0754810:CDS | 20.0% |
| !! | AAAAAAGTTGTATACTAGTA+AGG | + | chr5_2:8529756-8529775 | Msa0754810:CDS | 20.0% |
| ! | AAAAGATGAAGGTTGTTTAA+TGG | - | chr5_2:8528336-8528355 | None:intergenic | 25.0% |
| !!! | TTTTTGTCACTTTTTTGGAT+AGG | - | chr5_2:8528479-8528498 | None:intergenic | 25.0% |
| ! | ATCCAAAAAAGTGACAAAAA+AGG | + | chr5_2:8528479-8528498 | Msa0754810:CDS | 25.0% |
| !!! | TTCCTTTTTTGTCACTTTTT+TGG | - | chr5_2:8528484-8528503 | None:intergenic | 25.0% |
| ! | AAAGGAAAAAACTTTCTTGA+AGG | + | chr5_2:8528497-8528516 | Msa0754810:CDS | 25.0% |
| ! | TATTCTCCAAGAAATATCAT+CGG | + | chr5_2:8528620-8528639 | Msa0754810:CDS | 25.0% |
| ! | ATCAATTGGATTACCTAAAT+GGG | + | chr5_2:8528868-8528887 | Msa0754810:CDS | 25.0% |
| ! | TCTGTTAATCTTAATAGACA+AGG | + | chr5_2:8529790-8529809 | Msa0754810:CDS | 25.0% |
| ! | AAAAGATGAAGGTTGTTTAA+TGG | - | chr5_2:8528336-8528355 | None:intergenic | 25.0% |
| !!! | TTTTTGTCACTTTTTTGGAT+AGG | - | chr5_2:8528479-8528498 | None:intergenic | 25.0% |
| ! | ATCCAAAAAAGTGACAAAAA+AGG | + | chr5_2:8528479-8528498 | Msa0754810:CDS | 25.0% |
| !!! | TTCCTTTTTTGTCACTTTTT+TGG | - | chr5_2:8528484-8528503 | None:intergenic | 25.0% |
| ! | AAAGGAAAAAACTTTCTTGA+AGG | + | chr5_2:8528497-8528516 | Msa0754810:CDS | 25.0% |
| ! | TATTCTCCAAGAAATATCAT+CGG | + | chr5_2:8528620-8528639 | Msa0754810:CDS | 25.0% |
| ! | ATCAATTGGATTACCTAAAT+GGG | + | chr5_2:8528868-8528887 | Msa0754810:CDS | 25.0% |
| ! | TCTGTTAATCTTAATAGACA+AGG | + | chr5_2:8529790-8529809 | Msa0754810:CDS | 25.0% |
| TTAGTGCTTGAAATTTGTGA+AGG | - | chr5_2:8528283-8528302 | None:intergenic | 30.0% | |
| GTTGTTTAATGGAAGAAGAA+TGG | - | chr5_2:8528325-8528344 | None:intergenic | 30.0% | |
| AAACCAATAACAACTCATCT+AGG | + | chr5_2:8528366-8528385 | Msa0754810:CDS | 30.0% | |
| TAACCTAGATGAGTTGTTAT+TGG | - | chr5_2:8528372-8528391 | None:intergenic | 30.0% | |
| !!! | CTTTTTTGGATAGGTTGTAT+TGG | - | chr5_2:8528470-8528489 | None:intergenic | 30.0% |
| ATTCTCCAAGAAATATCATC+GGG | + | chr5_2:8528621-8528640 | Msa0754810:CDS | 30.0% | |
| ! | GTTACTTTATAAGATCTCTC+CGG | - | chr5_2:8528827-8528846 | None:intergenic | 30.0% |
| CATCAATTGGATTACCTAAA+TGG | + | chr5_2:8528867-8528886 | Msa0754810:CDS | 30.0% | |
| TAAAAGAGAGATTGCAAGAA+TGG | + | chr5_2:8528967-8528986 | Msa0754810:CDS | 30.0% | |
| AAAAGAGAGATTGCAAGAAT+GGG | + | chr5_2:8528968-8528987 | Msa0754810:CDS | 30.0% | |
| ATAAATCCACACTCAACTTT+GGG | - | chr5_2:8529130-8529149 | None:intergenic | 30.0% | |
| AGAGGCTTATTTACATTTAG+TGG | + | chr5_2:8529648-8529667 | Msa0754810:CDS | 30.0% | |
| GCTTATTTACATTTAGTGGA+TGG | + | chr5_2:8529652-8529671 | Msa0754810:CDS | 30.0% | |
| TTGTATACTAGTAAGGCTAA+AGG | + | chr5_2:8529763-8529782 | Msa0754810:CDS | 30.0% | |
| TTGTCTAATCTTAGTAGACA+GGG | + | chr5_2:8529820-8529839 | Msa0754810:CDS | 30.0% | |
| TTAGTGCTTGAAATTTGTGA+AGG | - | chr5_2:8528283-8528302 | None:intergenic | 30.0% | |
| GTTGTTTAATGGAAGAAGAA+TGG | - | chr5_2:8528325-8528344 | None:intergenic | 30.0% | |
| AAACCAATAACAACTCATCT+AGG | + | chr5_2:8528366-8528385 | Msa0754810:CDS | 30.0% | |
| TAACCTAGATGAGTTGTTAT+TGG | - | chr5_2:8528372-8528391 | None:intergenic | 30.0% | |
| !!! | CTTTTTTGGATAGGTTGTAT+TGG | - | chr5_2:8528470-8528489 | None:intergenic | 30.0% |
| ATTCTCCAAGAAATATCATC+GGG | + | chr5_2:8528621-8528640 | Msa0754810:CDS | 30.0% | |
| ! | GTTACTTTATAAGATCTCTC+CGG | - | chr5_2:8528827-8528846 | None:intergenic | 30.0% |
| CATCAATTGGATTACCTAAA+TGG | + | chr5_2:8528867-8528886 | Msa0754810:CDS | 30.0% | |
| TAAAAGAGAGATTGCAAGAA+TGG | + | chr5_2:8528967-8528986 | Msa0754810:CDS | 30.0% | |
| AAAAGAGAGATTGCAAGAAT+GGG | + | chr5_2:8528968-8528987 | Msa0754810:CDS | 30.0% | |
| ATAAATCCACACTCAACTTT+GGG | - | chr5_2:8529130-8529149 | None:intergenic | 30.0% | |
| AGAGGCTTATTTACATTTAG+TGG | + | chr5_2:8529648-8529667 | Msa0754810:CDS | 30.0% | |
| GCTTATTTACATTTAGTGGA+TGG | + | chr5_2:8529652-8529671 | Msa0754810:CDS | 30.0% | |
| TTGTATACTAGTAAGGCTAA+AGG | + | chr5_2:8529763-8529782 | Msa0754810:CDS | 30.0% | |
| TTGTCTAATCTTAGTAGACA+GGG | + | chr5_2:8529820-8529839 | Msa0754810:CDS | 30.0% | |
| TGAAGAGAAGCAAAAGATGA+AGG | - | chr5_2:8528347-8528366 | None:intergenic | 35.0% | |
| ! | ATGATGATTCCAAAGGCTTT+TGG | - | chr5_2:8528427-8528446 | None:intergenic | 35.0% |
| !! | TTGGTTGATGATGATTCCAA+AGG | - | chr5_2:8528434-8528453 | None:intergenic | 35.0% |
| ! | TATTGGTTGTTGAAACTGGT+TGG | - | chr5_2:8528453-8528472 | None:intergenic | 35.0% |
| !! | GTTGTATTGGTTGTTGAAAC+TGG | - | chr5_2:8528457-8528476 | None:intergenic | 35.0% |
| GACTTAACCTAGCAAAACTA+TGG | + | chr5_2:8528519-8528538 | Msa0754810:CDS | 35.0% | |
| TTTCTCCCGATGATATTTCT+TGG | - | chr5_2:8528629-8528648 | None:intergenic | 35.0% | |
| GGTTGTTAGATATGGTGATT+TGG | + | chr5_2:8528721-8528740 | Msa0754810:CDS | 35.0% | |
| !! | AGGTAATCCAATTGATGATG+TGG | - | chr5_2:8528864-8528883 | None:intergenic | 35.0% |
| !! | ATTACCTAAATGGGTTGATG+AGG | + | chr5_2:8528877-8528896 | Msa0754810:CDS | 35.0% |
| GATATTGTGATATCTCTTCG+TGG | + | chr5_2:8528998-8529017 | Msa0754810:CDS | 35.0% | |
| AACTTCCACTTGTCTTGAAT+GGG | + | chr5_2:8529021-8529040 | Msa0754810:CDS | 35.0% | |
| CATAAATCCACACTCAACTT+TGG | - | chr5_2:8529131-8529150 | None:intergenic | 35.0% | |
| ATGAGCTTGTACAAGACAAA+AGG | + | chr5_2:8529148-8529167 | Msa0754810:CDS | 35.0% | |
| TGAGCTTGTACAAGACAAAA+GGG | + | chr5_2:8529149-8529168 | Msa0754810:CDS | 35.0% | |
| ! | CGCCTTATTGAACTTTACAA+AGG | + | chr5_2:8529217-8529236 | Msa0754810:CDS | 35.0% |
| CGCCTTTGTAAAGTTCAATA+AGG | - | chr5_2:8529222-8529241 | None:intergenic | 35.0% | |
| GAATTAAGCATAACCGTTAC+CGG | + | chr5_2:8529244-8529263 | Msa0754810:CDS | 35.0% | |
| !! | CTTTTCAAGATGTTCTCCAA+AGG | - | chr5_2:8529386-8529405 | None:intergenic | 35.0% |
| TCCTCGCTTAAAAATATTCC+TGG | - | chr5_2:8529463-8529482 | None:intergenic | 35.0% | |
| AAGAATTCCAAGGTTGTTAG+TGG | + | chr5_2:8529499-8529518 | Msa0754810:CDS | 35.0% | |
| TAGTGGAGTTGTTGATATGT+TGG | + | chr5_2:8529516-8529535 | Msa0754810:CDS | 35.0% | |
| ! | ACATTTAGTGGATGGATACA+TGG | + | chr5_2:8529660-8529679 | Msa0754810:CDS | 35.0% |
| !! | CTCTTAGCATTAGCTCTAAA+TGG | - | chr5_2:8529697-8529716 | None:intergenic | 35.0% |
| CTTGTCTAATCTTAGTAGAC+AGG | + | chr5_2:8529819-8529838 | Msa0754810:CDS | 35.0% | |
| TGAAGAGAAGCAAAAGATGA+AGG | - | chr5_2:8528347-8528366 | None:intergenic | 35.0% | |
| ! | ATGATGATTCCAAAGGCTTT+TGG | - | chr5_2:8528427-8528446 | None:intergenic | 35.0% |
| !! | TTGGTTGATGATGATTCCAA+AGG | - | chr5_2:8528434-8528453 | None:intergenic | 35.0% |
| ! | TATTGGTTGTTGAAACTGGT+TGG | - | chr5_2:8528453-8528472 | None:intergenic | 35.0% |
| !! | GTTGTATTGGTTGTTGAAAC+TGG | - | chr5_2:8528457-8528476 | None:intergenic | 35.0% |
| GACTTAACCTAGCAAAACTA+TGG | + | chr5_2:8528519-8528538 | Msa0754810:CDS | 35.0% | |
| TTTCTCCCGATGATATTTCT+TGG | - | chr5_2:8528629-8528648 | None:intergenic | 35.0% | |
| GGTTGTTAGATATGGTGATT+TGG | + | chr5_2:8528721-8528740 | Msa0754810:CDS | 35.0% | |
| !! | AGGTAATCCAATTGATGATG+TGG | - | chr5_2:8528864-8528883 | None:intergenic | 35.0% |
| !! | ATTACCTAAATGGGTTGATG+AGG | + | chr5_2:8528877-8528896 | Msa0754810:CDS | 35.0% |
| GATATTGTGATATCTCTTCG+TGG | + | chr5_2:8528998-8529017 | Msa0754810:CDS | 35.0% | |
| AACTTCCACTTGTCTTGAAT+GGG | + | chr5_2:8529021-8529040 | Msa0754810:CDS | 35.0% | |
| CATAAATCCACACTCAACTT+TGG | - | chr5_2:8529131-8529150 | None:intergenic | 35.0% | |
| ATGAGCTTGTACAAGACAAA+AGG | + | chr5_2:8529148-8529167 | Msa0754810:CDS | 35.0% | |
| TGAGCTTGTACAAGACAAAA+GGG | + | chr5_2:8529149-8529168 | Msa0754810:CDS | 35.0% | |
| ! | CGCCTTATTGAACTTTACAA+AGG | + | chr5_2:8529217-8529236 | Msa0754810:CDS | 35.0% |
| CGCCTTTGTAAAGTTCAATA+AGG | - | chr5_2:8529222-8529241 | None:intergenic | 35.0% | |
| GAATTAAGCATAACCGTTAC+CGG | + | chr5_2:8529244-8529263 | Msa0754810:CDS | 35.0% | |
| !! | CTTTTCAAGATGTTCTCCAA+AGG | - | chr5_2:8529386-8529405 | None:intergenic | 35.0% |
| TCCTCGCTTAAAAATATTCC+TGG | - | chr5_2:8529463-8529482 | None:intergenic | 35.0% | |
| AAGAATTCCAAGGTTGTTAG+TGG | + | chr5_2:8529499-8529518 | Msa0754810:CDS | 35.0% | |
| TAGTGGAGTTGTTGATATGT+TGG | + | chr5_2:8529516-8529535 | Msa0754810:CDS | 35.0% | |
| ! | ACATTTAGTGGATGGATACA+TGG | + | chr5_2:8529660-8529679 | Msa0754810:CDS | 35.0% |
| !! | CTCTTAGCATTAGCTCTAAA+TGG | - | chr5_2:8529697-8529716 | None:intergenic | 35.0% |
| CTTGTCTAATCTTAGTAGAC+AGG | + | chr5_2:8529819-8529838 | Msa0754810:CDS | 35.0% | |
| AATTTGTGAAGGTTGTGAGC+AGG | - | chr5_2:8528272-8528291 | None:intergenic | 40.0% | |
| ! | GAAGAATGGCATCTGAAACT+AGG | - | chr5_2:8528311-8528330 | None:intergenic | 40.0% |
| ! | TCTTGATAGCCAAAAGCCTT+TGG | + | chr5_2:8528415-8528434 | Msa0754810:CDS | 40.0% |
| ! | TCTTCAGCTGCTTTAATCTC+TGG | - | chr5_2:8528545-8528564 | None:intergenic | 40.0% |
| GAAATATCATCGGGAGAAAG+TGG | + | chr5_2:8528630-8528649 | Msa0754810:CDS | 40.0% | |
| AGAAAGTGGAGGGAATATCA+TGG | + | chr5_2:8528644-8528663 | Msa0754810:CDS | 40.0% | |
| CTGTATGCCACATCATCAAT+TGG | + | chr5_2:8528854-8528873 | Msa0754810:CDS | 40.0% | |
| GAACTTCCACTTGTCTTGAA+TGG | + | chr5_2:8529020-8529039 | Msa0754810:CDS | 40.0% | |
| CTCGGGTAAATCGACTAATT+GGG | - | chr5_2:8529062-8529081 | None:intergenic | 40.0% | |
| ! | ACTCAACTTTGGGCTTTGAT+TGG | - | chr5_2:8529120-8529139 | None:intergenic | 40.0% |
| GAGCTTGTACAAGACAAAAG+GGG | + | chr5_2:8529150-8529169 | Msa0754810:CDS | 40.0% | |
| CCAAATGAAAAAACAGCCAC+GGG | - | chr5_2:8529340-8529359 | None:intergenic | 40.0% | |
| GCCAAATGAAAAAACAGCCA+CGG | - | chr5_2:8529341-8529360 | None:intergenic | 40.0% | |
| !!! | GTGGCTGTTTTTTCATTTGG+CGG | + | chr5_2:8529340-8529359 | Msa0754810:CDS | 40.0% |
| ACACACAAGACGTGATTACA+AGG | + | chr5_2:8529434-8529453 | Msa0754810:CDS | 40.0% | |
| CACACAAGACGTGATTACAA+GGG | + | chr5_2:8529435-8529454 | Msa0754810:CDS | 40.0% | |
| !! | GCCAGGAATATTTTTAAGCG+AGG | + | chr5_2:8529459-8529478 | Msa0754810:CDS | 40.0% |
| AACAACTCCACTAACAACCT+TGG | - | chr5_2:8529509-8529528 | None:intergenic | 40.0% | |
| TTGGAAGAGAACACTCCTTT+GGG | + | chr5_2:8529535-8529554 | Msa0754810:CDS | 40.0% | |
| CCAACATGTGAATATCCCAA+AGG | - | chr5_2:8529553-8529572 | None:intergenic | 40.0% | |
| !! | CCTTTGGGATATTCACATGT+TGG | + | chr5_2:8529550-8529569 | Msa0754810:CDS | 40.0% |
| ACAACAAGCTATGTCAGCAT+CGG | - | chr5_2:8529620-8529639 | None:intergenic | 40.0% | |
| !! | AGCTTGTTGTCATGATCTAG+AGG | + | chr5_2:8529630-8529649 | Msa0754810:CDS | 40.0% |
| AATTTGTGAAGGTTGTGAGC+AGG | - | chr5_2:8528272-8528291 | None:intergenic | 40.0% | |
| ! | GAAGAATGGCATCTGAAACT+AGG | - | chr5_2:8528311-8528330 | None:intergenic | 40.0% |
| ! | TCTTGATAGCCAAAAGCCTT+TGG | + | chr5_2:8528415-8528434 | Msa0754810:CDS | 40.0% |
| ! | TCTTCAGCTGCTTTAATCTC+TGG | - | chr5_2:8528545-8528564 | None:intergenic | 40.0% |
| GAAATATCATCGGGAGAAAG+TGG | + | chr5_2:8528630-8528649 | Msa0754810:CDS | 40.0% | |
| AGAAAGTGGAGGGAATATCA+TGG | + | chr5_2:8528644-8528663 | Msa0754810:CDS | 40.0% | |
| CTGTATGCCACATCATCAAT+TGG | + | chr5_2:8528854-8528873 | Msa0754810:CDS | 40.0% | |
| GAACTTCCACTTGTCTTGAA+TGG | + | chr5_2:8529020-8529039 | Msa0754810:CDS | 40.0% | |
| CTCGGGTAAATCGACTAATT+GGG | - | chr5_2:8529062-8529081 | None:intergenic | 40.0% | |
| ! | ACTCAACTTTGGGCTTTGAT+TGG | - | chr5_2:8529120-8529139 | None:intergenic | 40.0% |
| GAGCTTGTACAAGACAAAAG+GGG | + | chr5_2:8529150-8529169 | Msa0754810:CDS | 40.0% | |
| CCAAATGAAAAAACAGCCAC+GGG | - | chr5_2:8529340-8529359 | None:intergenic | 40.0% | |
| GCCAAATGAAAAAACAGCCA+CGG | - | chr5_2:8529341-8529360 | None:intergenic | 40.0% | |
| !!! | GTGGCTGTTTTTTCATTTGG+CGG | + | chr5_2:8529340-8529359 | Msa0754810:CDS | 40.0% |
| ACACACAAGACGTGATTACA+AGG | + | chr5_2:8529434-8529453 | Msa0754810:CDS | 40.0% | |
| CACACAAGACGTGATTACAA+GGG | + | chr5_2:8529435-8529454 | Msa0754810:CDS | 40.0% | |
| !! | GCCAGGAATATTTTTAAGCG+AGG | + | chr5_2:8529459-8529478 | Msa0754810:CDS | 40.0% |
| AACAACTCCACTAACAACCT+TGG | - | chr5_2:8529509-8529528 | None:intergenic | 40.0% | |
| TTGGAAGAGAACACTCCTTT+GGG | + | chr5_2:8529535-8529554 | Msa0754810:CDS | 40.0% | |
| CCAACATGTGAATATCCCAA+AGG | - | chr5_2:8529553-8529572 | None:intergenic | 40.0% | |
| !! | CCTTTGGGATATTCACATGT+TGG | + | chr5_2:8529550-8529569 | Msa0754810:CDS | 40.0% |
| ACAACAAGCTATGTCAGCAT+CGG | - | chr5_2:8529620-8529639 | None:intergenic | 40.0% | |
| !! | AGCTTGTTGTCATGATCTAG+AGG | + | chr5_2:8529630-8529649 | Msa0754810:CDS | 40.0% |
| !! | TCTCTGGCCATAGTTTTGCT+AGG | - | chr5_2:8528529-8528548 | None:intergenic | 45.0% |
| ACAGCGTCTTCTTTCCAAGA+CGG | + | chr5_2:8528592-8528611 | Msa0754810:CDS | 45.0% | |
| ATATCATCGGGAGAAAGTGG+AGG | + | chr5_2:8528633-8528652 | Msa0754810:CDS | 45.0% | |
| TATCATCGGGAGAAAGTGGA+GGG | + | chr5_2:8528634-8528653 | Msa0754810:CDS | 45.0% | |
| AATATCATGGCAGCAACGAC+TGG | + | chr5_2:8528657-8528676 | Msa0754810:CDS | 45.0% | |
| CATATCTAACAACCTCTCGC+CGG | - | chr5_2:8528715-8528734 | None:intergenic | 45.0% | |
| !! | AACGACACCTCTTGATGATG+GGG | - | chr5_2:8528803-8528822 | None:intergenic | 45.0% |
| ! | CAACGACACCTCTTGATGAT+GGG | - | chr5_2:8528804-8528823 | None:intergenic | 45.0% |
| TGATGTGGCATACAGACTCT+TGG | - | chr5_2:8528849-8528868 | None:intergenic | 45.0% | |
| !! | ACCTAAATGGGTTGATGAGG+TGG | + | chr5_2:8528880-8528899 | Msa0754810:CDS | 45.0% |
| TTCAGCCCATTCAAGACAAG+TGG | - | chr5_2:8529029-8529048 | None:intergenic | 45.0% | |
| CCTCGGGTAAATCGACTAAT+TGG | - | chr5_2:8529063-8529082 | None:intergenic | 45.0% | |
| ! | CCAATTAGTCGATTTACCCG+AGG | + | chr5_2:8529060-8529079 | Msa0754810:CDS | 45.0% |
| TCAAAGCCCAAAGTTGAGTG+TGG | + | chr5_2:8529121-8529140 | Msa0754810:CDS | 45.0% | |
| ! | CACTTCTTCAACAACGGACT+CGG | - | chr5_2:8529194-8529213 | None:intergenic | 45.0% |
| AATTTCCTCGGCCACCAATA+GGG | - | chr5_2:8529293-8529312 | None:intergenic | 45.0% | |
| TAATTTCCTCGGCCACCAAT+AGG | - | chr5_2:8529294-8529313 | None:intergenic | 45.0% | |
| AATGAAAAAACAGCCACGGG+TGG | - | chr5_2:8529337-8529356 | None:intergenic | 45.0% | |
| !!! | CCCGTGGCTGTTTTTTCATT+TGG | + | chr5_2:8529337-8529356 | Msa0754810:CDS | 45.0% |
| GTTGGAAGAGAACACTCCTT+TGG | + | chr5_2:8529534-8529553 | Msa0754810:CDS | 45.0% | |
| CAACAAGCTATGTCAGCATC+GGG | - | chr5_2:8529619-8529638 | None:intergenic | 45.0% | |
| TAGACAGGGATCCATGTCTA+TGG | + | chr5_2:8529834-8529853 | Msa0754810:CDS | 45.0% | |
| ACAACAAGCAGCCATAGACA+TGG | - | chr5_2:8529848-8529867 | None:intergenic | 45.0% | |
| !! | TCTCTGGCCATAGTTTTGCT+AGG | - | chr5_2:8528529-8528548 | None:intergenic | 45.0% |
| ACAGCGTCTTCTTTCCAAGA+CGG | + | chr5_2:8528592-8528611 | Msa0754810:CDS | 45.0% | |
| ATATCATCGGGAGAAAGTGG+AGG | + | chr5_2:8528633-8528652 | Msa0754810:CDS | 45.0% | |
| TATCATCGGGAGAAAGTGGA+GGG | + | chr5_2:8528634-8528653 | Msa0754810:CDS | 45.0% | |
| AATATCATGGCAGCAACGAC+TGG | + | chr5_2:8528657-8528676 | Msa0754810:CDS | 45.0% | |
| CATATCTAACAACCTCTCGC+CGG | - | chr5_2:8528715-8528734 | None:intergenic | 45.0% | |
| !! | AACGACACCTCTTGATGATG+GGG | - | chr5_2:8528803-8528822 | None:intergenic | 45.0% |
| ! | CAACGACACCTCTTGATGAT+GGG | - | chr5_2:8528804-8528823 | None:intergenic | 45.0% |
| TGATGTGGCATACAGACTCT+TGG | - | chr5_2:8528849-8528868 | None:intergenic | 45.0% | |
| !! | ACCTAAATGGGTTGATGAGG+TGG | + | chr5_2:8528880-8528899 | Msa0754810:CDS | 45.0% |
| TTCAGCCCATTCAAGACAAG+TGG | - | chr5_2:8529029-8529048 | None:intergenic | 45.0% | |
| CCTCGGGTAAATCGACTAAT+TGG | - | chr5_2:8529063-8529082 | None:intergenic | 45.0% | |
| ! | CCAATTAGTCGATTTACCCG+AGG | + | chr5_2:8529060-8529079 | Msa0754810:CDS | 45.0% |
| TCAAAGCCCAAAGTTGAGTG+TGG | + | chr5_2:8529121-8529140 | Msa0754810:CDS | 45.0% | |
| ! | CACTTCTTCAACAACGGACT+CGG | - | chr5_2:8529194-8529213 | None:intergenic | 45.0% |
| AATTTCCTCGGCCACCAATA+GGG | - | chr5_2:8529293-8529312 | None:intergenic | 45.0% | |
| TAATTTCCTCGGCCACCAAT+AGG | - | chr5_2:8529294-8529313 | None:intergenic | 45.0% | |
| AATGAAAAAACAGCCACGGG+TGG | - | chr5_2:8529337-8529356 | None:intergenic | 45.0% | |
| !!! | CCCGTGGCTGTTTTTTCATT+TGG | + | chr5_2:8529337-8529356 | Msa0754810:CDS | 45.0% |
| GTTGGAAGAGAACACTCCTT+TGG | + | chr5_2:8529534-8529553 | Msa0754810:CDS | 45.0% | |
| CAACAAGCTATGTCAGCATC+GGG | - | chr5_2:8529619-8529638 | None:intergenic | 45.0% | |
| TAGACAGGGATCCATGTCTA+TGG | + | chr5_2:8529834-8529853 | Msa0754810:CDS | 45.0% | |
| ACAACAAGCAGCCATAGACA+TGG | - | chr5_2:8529848-8529867 | None:intergenic | 45.0% | |
| GTGAAGGTTGTGAGCAGGTA+AGG | - | chr5_2:8528267-8528286 | None:intergenic | 50.0% | |
| GAAGACGCTGTAAGCGTTTC+AGG | - | chr5_2:8528583-8528602 | None:intergenic | 50.0% | |
| GAAGGGGATGTTAGATCCCT+TGG | + | chr5_2:8528679-8528698 | Msa0754810:CDS | 50.0% | |
| ATCCCTTGGATGACAACCTC+CGG | + | chr5_2:8528693-8528712 | Msa0754810:CDS | 50.0% | |
| CGGCGAGAGGTTGTTAGATA+TGG | + | chr5_2:8528713-8528732 | Msa0754810:CDS | 50.0% | |
| GCTTCAGTTGTTGACATGGC+AGG | - | chr5_2:8528779-8528798 | None:intergenic | 50.0% | |
| GGGTGCTTCAGTTGTTGACA+TGG | - | chr5_2:8528783-8528802 | None:intergenic | 50.0% | |
| ! | TGAAGCACCCCATCATCAAG+AGG | + | chr5_2:8528793-8528812 | Msa0754810:CDS | 50.0% |
| GCAACGACACCTCTTGATGA+TGG | - | chr5_2:8528805-8528824 | None:intergenic | 50.0% | |
| !! | TCATCAAGAGGTGTCGTTGC+CGG | + | chr5_2:8528805-8528824 | Msa0754810:CDS | 50.0% |
| GCCACCTCATCAACCCATTT+AGG | - | chr5_2:8528884-8528903 | None:intergenic | 50.0% | |
| TGGGTCATCCAACCAAGATC+TGG | - | chr5_2:8528908-8528927 | None:intergenic | 50.0% | |
| TCAGACTCAGACTCAGACTC+AGG | + | chr5_2:8529087-8529106 | Msa0754810:CDS | 50.0% | |
| ! | CTTCAACAACGGACTCGGAT+AGG | - | chr5_2:8529189-8529208 | None:intergenic | 50.0% |
| GCGTCGCACTTCTTCAACAA+CGG | - | chr5_2:8529200-8529219 | None:intergenic | 50.0% | |
| AAGGCTCTGTTACCAACACG+AGG | - | chr5_2:8529367-8529386 | None:intergenic | 50.0% | |
| !! | CGTGTTGGTAACAGAGCCTT+TGG | + | chr5_2:8529367-8529386 | Msa0754810:CDS | 50.0% |
| ! | TCAGCATCGGGCTTCAAGTA+AGG | - | chr5_2:8529607-8529626 | None:intergenic | 50.0% |
| GTGAAGGTTGTGAGCAGGTA+AGG | - | chr5_2:8528267-8528286 | None:intergenic | 50.0% | |
| GAAGACGCTGTAAGCGTTTC+AGG | - | chr5_2:8528583-8528602 | None:intergenic | 50.0% | |
| GAAGGGGATGTTAGATCCCT+TGG | + | chr5_2:8528679-8528698 | Msa0754810:CDS | 50.0% | |
| ATCCCTTGGATGACAACCTC+CGG | + | chr5_2:8528693-8528712 | Msa0754810:CDS | 50.0% | |
| CGGCGAGAGGTTGTTAGATA+TGG | + | chr5_2:8528713-8528732 | Msa0754810:CDS | 50.0% | |
| GCTTCAGTTGTTGACATGGC+AGG | - | chr5_2:8528779-8528798 | None:intergenic | 50.0% | |
| GGGTGCTTCAGTTGTTGACA+TGG | - | chr5_2:8528783-8528802 | None:intergenic | 50.0% | |
| ! | TGAAGCACCCCATCATCAAG+AGG | + | chr5_2:8528793-8528812 | Msa0754810:CDS | 50.0% |
| GCAACGACACCTCTTGATGA+TGG | - | chr5_2:8528805-8528824 | None:intergenic | 50.0% | |
| !! | TCATCAAGAGGTGTCGTTGC+CGG | + | chr5_2:8528805-8528824 | Msa0754810:CDS | 50.0% |
| GCCACCTCATCAACCCATTT+AGG | - | chr5_2:8528884-8528903 | None:intergenic | 50.0% | |
| TGGGTCATCCAACCAAGATC+TGG | - | chr5_2:8528908-8528927 | None:intergenic | 50.0% | |
| TCAGACTCAGACTCAGACTC+AGG | + | chr5_2:8529087-8529106 | Msa0754810:CDS | 50.0% | |
| ! | CTTCAACAACGGACTCGGAT+AGG | - | chr5_2:8529189-8529208 | None:intergenic | 50.0% |
| GCGTCGCACTTCTTCAACAA+CGG | - | chr5_2:8529200-8529219 | None:intergenic | 50.0% | |
| AAGGCTCTGTTACCAACACG+AGG | - | chr5_2:8529367-8529386 | None:intergenic | 50.0% | |
| !! | CGTGTTGGTAACAGAGCCTT+TGG | + | chr5_2:8529367-8529386 | Msa0754810:CDS | 50.0% |
| ! | TCAGCATCGGGCTTCAAGTA+AGG | - | chr5_2:8529607-8529626 | None:intergenic | 50.0% |
| ! | TGTAAGCGTTTCAGGTGGCG+GGG | - | chr5_2:8528575-8528594 | None:intergenic | 55.0% |
| ! | CTGTAAGCGTTTCAGGTGGC+GGG | - | chr5_2:8528576-8528595 | None:intergenic | 55.0% |
| ! | GCTGTAAGCGTTTCAGGTGG+CGG | - | chr5_2:8528577-8528596 | None:intergenic | 55.0% |
| GACGCTGTAAGCGTTTCAGG+TGG | - | chr5_2:8528580-8528599 | None:intergenic | 55.0% | |
| GCGTCTTCTTTCCAAGACGG+CGG | + | chr5_2:8528595-8528614 | Msa0754810:CDS | 55.0% | |
| TGGAGAATACTCCGCCGTCT+TGG | - | chr5_2:8528609-8528628 | None:intergenic | 55.0% | |
| TCATGGCAGCAACGACTGGA+AGG | + | chr5_2:8528661-8528680 | Msa0754810:CDS | 55.0% | |
| CATGGCAGCAACGACTGGAA+GGG | + | chr5_2:8528662-8528681 | Msa0754810:CDS | 55.0% | |
| ATGGCAGCAACGACTGGAAG+GGG | + | chr5_2:8528663-8528682 | Msa0754810:CDS | 55.0% | |
| ATCTAACAACCTCTCGCCGG+AGG | - | chr5_2:8528712-8528731 | None:intergenic | 55.0% | |
| GATGAGGTGGCACCAGATCT+TGG | + | chr5_2:8528893-8528912 | Msa0754810:CDS | 55.0% | |
| AGGTGGCACCAGATCTTGGT+TGG | + | chr5_2:8528897-8528916 | Msa0754810:CDS | 55.0% | |
| ! | GATGACCCAGCGTTCTAGCT+GGG | + | chr5_2:8528919-8528938 | Msa0754810:CDS | 55.0% |
| TCCAACCCAGCTAGAACGCT+GGG | - | chr5_2:8528927-8528946 | None:intergenic | 55.0% | |
| ATCCAACCCAGCTAGAACGC+TGG | - | chr5_2:8528928-8528947 | None:intergenic | 55.0% | |
| AGTCTGAGTCTGAGCGTCCT+CGG | - | chr5_2:8529080-8529099 | None:intergenic | 55.0% | |
| CAGACTCAGACTCAGGCACA+AGG | + | chr5_2:8529094-8529113 | Msa0754810:CDS | 55.0% | |
| GCCGAGGAAATTAGCACGTG+CGG | + | chr5_2:8529301-8529320 | Msa0754810:CDS | 55.0% | |
| CCCGCACGTGCTAATTTCCT+CGG | - | chr5_2:8529305-8529324 | None:intergenic | 55.0% | |
| CCGAGGAAATTAGCACGTGC+GGG | + | chr5_2:8529302-8529321 | Msa0754810:CDS | 55.0% | |
| ! | TCATTTGGCGGACCTCGTGT+TGG | + | chr5_2:8529352-8529371 | Msa0754810:CDS | 55.0% |
| !! | GACGTGATTACAAGGGTGCC+AGG | + | chr5_2:8529442-8529461 | Msa0754810:CDS | 55.0% |
| ! | TGTAAGCGTTTCAGGTGGCG+GGG | - | chr5_2:8528575-8528594 | None:intergenic | 55.0% |
| ! | CTGTAAGCGTTTCAGGTGGC+GGG | - | chr5_2:8528576-8528595 | None:intergenic | 55.0% |
| ! | GCTGTAAGCGTTTCAGGTGG+CGG | - | chr5_2:8528577-8528596 | None:intergenic | 55.0% |
| GACGCTGTAAGCGTTTCAGG+TGG | - | chr5_2:8528580-8528599 | None:intergenic | 55.0% | |
| GCGTCTTCTTTCCAAGACGG+CGG | + | chr5_2:8528595-8528614 | Msa0754810:CDS | 55.0% | |
| TGGAGAATACTCCGCCGTCT+TGG | - | chr5_2:8528609-8528628 | None:intergenic | 55.0% | |
| TCATGGCAGCAACGACTGGA+AGG | + | chr5_2:8528661-8528680 | Msa0754810:CDS | 55.0% | |
| CATGGCAGCAACGACTGGAA+GGG | + | chr5_2:8528662-8528681 | Msa0754810:CDS | 55.0% | |
| ATGGCAGCAACGACTGGAAG+GGG | + | chr5_2:8528663-8528682 | Msa0754810:CDS | 55.0% | |
| ATCTAACAACCTCTCGCCGG+AGG | - | chr5_2:8528712-8528731 | None:intergenic | 55.0% | |
| GATGAGGTGGCACCAGATCT+TGG | + | chr5_2:8528893-8528912 | Msa0754810:CDS | 55.0% | |
| AGGTGGCACCAGATCTTGGT+TGG | + | chr5_2:8528897-8528916 | Msa0754810:CDS | 55.0% | |
| ! | GATGACCCAGCGTTCTAGCT+GGG | + | chr5_2:8528919-8528938 | Msa0754810:CDS | 55.0% |
| TCCAACCCAGCTAGAACGCT+GGG | - | chr5_2:8528927-8528946 | None:intergenic | 55.0% | |
| ATCCAACCCAGCTAGAACGC+TGG | - | chr5_2:8528928-8528947 | None:intergenic | 55.0% | |
| AGTCTGAGTCTGAGCGTCCT+CGG | - | chr5_2:8529080-8529099 | None:intergenic | 55.0% | |
| CAGACTCAGACTCAGGCACA+AGG | + | chr5_2:8529094-8529113 | Msa0754810:CDS | 55.0% | |
| GCCGAGGAAATTAGCACGTG+CGG | + | chr5_2:8529301-8529320 | Msa0754810:CDS | 55.0% | |
| CCCGCACGTGCTAATTTCCT+CGG | - | chr5_2:8529305-8529324 | None:intergenic | 55.0% | |
| CCGAGGAAATTAGCACGTGC+GGG | + | chr5_2:8529302-8529321 | Msa0754810:CDS | 55.0% | |
| ! | TCATTTGGCGGACCTCGTGT+TGG | + | chr5_2:8529352-8529371 | Msa0754810:CDS | 55.0% |
| !! | GACGTGATTACAAGGGTGCC+AGG | + | chr5_2:8529442-8529461 | Msa0754810:CDS | 55.0% |
| !! | TAAGCGTTTCAGGTGGCGGG+GGG | - | chr5_2:8528573-8528592 | None:intergenic | 60.0% |
| ! | GTAAGCGTTTCAGGTGGCGG+GGG | - | chr5_2:8528574-8528593 | None:intergenic | 60.0% |
| CGCCGGAGGTTGTCATCCAA+GGG | - | chr5_2:8528698-8528717 | None:intergenic | 60.0% | |
| TCGCCGGAGGTTGTCATCCA+AGG | - | chr5_2:8528699-8528718 | None:intergenic | 60.0% | |
| GGATGACCCAGCGTTCTAGC+TGG | + | chr5_2:8528918-8528937 | Msa0754810:CDS | 60.0% | |
| ! | ACCCAGCGTTCTAGCTGGGT+TGG | + | chr5_2:8528923-8528942 | Msa0754810:CDS | 60.0% |
| GTCTGAGTCTGAGCGTCCTC+GGG | - | chr5_2:8529079-8529098 | None:intergenic | 60.0% | |
| ACCGTTACCGGCCATAGCCT+TGG | + | chr5_2:8529256-8529275 | Msa0754810:CDS | 60.0% | |
| GCCAAGGCTATGGCCGGTAA+CGG | - | chr5_2:8529260-8529279 | None:intergenic | 60.0% | |
| CTAGTGTCGCGCCAAGGCTA+TGG | - | chr5_2:8529270-8529289 | None:intergenic | 60.0% | |
| ! | ATAGGGCTAGTGTCGCGCCA+AGG | - | chr5_2:8529276-8529295 | None:intergenic | 60.0% |
| TGGCGCGACACTAGCCCTAT+TGG | + | chr5_2:8529276-8529295 | Msa0754810:CDS | 60.0% | |
| CGCGACACTAGCCCTATTGG+TGG | + | chr5_2:8529279-8529298 | Msa0754810:CDS | 60.0% | |
| ! | ACTAGCCCTATTGGTGGCCG+AGG | + | chr5_2:8529285-8529304 | Msa0754810:CDS | 60.0% |
| !! | TAAGCGTTTCAGGTGGCGGG+GGG | - | chr5_2:8528573-8528592 | None:intergenic | 60.0% |
| ! | GTAAGCGTTTCAGGTGGCGG+GGG | - | chr5_2:8528574-8528593 | None:intergenic | 60.0% |
| CGCCGGAGGTTGTCATCCAA+GGG | - | chr5_2:8528698-8528717 | None:intergenic | 60.0% | |
| TCGCCGGAGGTTGTCATCCA+AGG | - | chr5_2:8528699-8528718 | None:intergenic | 60.0% | |
| GGATGACCCAGCGTTCTAGC+TGG | + | chr5_2:8528918-8528937 | Msa0754810:CDS | 60.0% | |
| ! | ACCCAGCGTTCTAGCTGGGT+TGG | + | chr5_2:8528923-8528942 | Msa0754810:CDS | 60.0% |
| GTCTGAGTCTGAGCGTCCTC+GGG | - | chr5_2:8529079-8529098 | None:intergenic | 60.0% | |
| ACCGTTACCGGCCATAGCCT+TGG | + | chr5_2:8529256-8529275 | Msa0754810:CDS | 60.0% | |
| GCCAAGGCTATGGCCGGTAA+CGG | - | chr5_2:8529260-8529279 | None:intergenic | 60.0% | |
| CTAGTGTCGCGCCAAGGCTA+TGG | - | chr5_2:8529270-8529289 | None:intergenic | 60.0% | |
| ! | ATAGGGCTAGTGTCGCGCCA+AGG | - | chr5_2:8529276-8529295 | None:intergenic | 60.0% |
| TGGCGCGACACTAGCCCTAT+TGG | + | chr5_2:8529276-8529295 | Msa0754810:CDS | 60.0% | |
| CGCGACACTAGCCCTATTGG+TGG | + | chr5_2:8529279-8529298 | Msa0754810:CDS | 60.0% | |
| ! | ACTAGCCCTATTGGTGGCCG+AGG | + | chr5_2:8529285-8529304 | Msa0754810:CDS | 60.0% |
| GGATGACAACCTCCGGCGAG+AGG | + | chr5_2:8528700-8528719 | Msa0754810:CDS | 65.0% | |
| TGTCGCGCCAAGGCTATGGC+CGG | - | chr5_2:8529266-8529285 | None:intergenic | 65.0% | |
| ACAGCCACGGGTGGCACGTT+TGG | - | chr5_2:8529328-8529347 | None:intergenic | 65.0% | |
| GGATGACAACCTCCGGCGAG+AGG | + | chr5_2:8528700-8528719 | Msa0754810:CDS | 65.0% | |
| TGTCGCGCCAAGGCTATGGC+CGG | - | chr5_2:8529266-8529285 | None:intergenic | 65.0% | |
| ACAGCCACGGGTGGCACGTT+TGG | - | chr5_2:8529328-8529347 | None:intergenic | 65.0% | |
| CGGGCCAAACGTGCCACCCG+TGG | + | chr5_2:8529321-8529340 | Msa0754810:CDS | 75.0% | |
| CGGGCCAAACGTGCCACCCG+TGG | + | chr5_2:8529321-8529340 | Msa0754810:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 8528242 | 8529888 | 8528242 | ID=Msa0754810;Name=Msa0754810 |
| chr5_2 | mRNA | 8528242 | 8529888 | 8528242 | ID=Msa0754810-mRNA-1;Parent=Msa0754810;Name=Msa0754810-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|548 |
| chr5_2 | exon | 8528242 | 8529888 | 8528242 | ID=Msa0754810-mRNA-1:exon:3856;Parent=Msa0754810-mRNA-1 |
| chr5_2 | CDS | 8528242 | 8529888 | 8528242 | ID=Msa0754810-mRNA-1:cds;Parent=Msa0754810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
