Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0782810 | sp|Q9ZQB9|CSLCC_ARATH | 60.000 | 80 | 21 | 3 | 1 | 75 | 1 | 74 | 3.42e-19 | 87.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0782810 | A0A072VCK0 | 94.667 | 75 | 2 | 1 | 1 | 75 | 1 | 73 | 1.45e-37 | 144 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0039250 | Msa0782810 | 0.801052 | 1.080120e-48 | -8.615850e-47 |
| Msa0782810 | Msa0861510 | 0.802611 | 5.167905e-49 | -8.615850e-47 |
| Msa0782810 | Msa1418260 | 0.801617 | 8.274808e-49 | -8.615850e-47 |
| Msa0133720 | Msa0782810 | 0.804147 | 2.483512e-49 | -8.615850e-47 |
| Msa0206840 | Msa0782810 | 0.814087 | 1.841965e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0782810 | MtrunA17_Chr3g0135191 | 94.667 | 75 | 2 | 1 | 1 | 75 | 1 | 73 | 6.71e-41 | 145 |
| Msa0782810 | MtrunA17_Chr3g0139081 | 48.750 | 80 | 25 | 3 | 1 | 75 | 1 | 69 | 3.99e-14 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0782810 | AT4G07960.1 | 60.000 | 80 | 21 | 3 | 1 | 75 | 1 | 74 | 3.47e-20 | 87.0 |
| Msa0782810 | AT4G07960.2 | 60.000 | 80 | 21 | 3 | 1 | 75 | 1 | 74 | 3.47e-20 | 87.0 |
| Msa0782810 | AT4G31590.1 | 53.750 | 80 | 21 | 3 | 1 | 75 | 1 | 69 | 1.24e-17 | 79.7 |
| Msa0782810 | AT2G24630.1 | 52.564 | 78 | 25 | 2 | 1 | 75 | 1 | 69 | 1.67e-16 | 76.3 |
| Msa0782810 | AT2G24630.2 | 52.564 | 78 | 25 | 2 | 1 | 75 | 1 | 69 | 1.67e-16 | 76.3 |
Find 37 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCAGCTCTATGAGCTTTA+AGG | 0.164902 | 5_2:-66142702 | None:intergenic |
| AGTTCATCAATGTCCCAATT+TGG | 0.224089 | 5_2:-66142574 | None:intergenic |
| TTATGGCATTTGCTTGTCTA+TGG | 0.258153 | 5_2:+66147000 | Msa0782810:CDS |
| AAATGGCACCTTTGTTCAAT+TGG | 0.282770 | 5_2:+66142500 | None:intergenic |
| CTATCTATCAATGGCCTTGA+TGG | 0.347301 | 5_2:+66146851 | Msa0782810:CDS |
| AATGGCACCTTTGTTCAATT+GGG | 0.361924 | 5_2:+66142501 | None:intergenic |
| AAGCCATCTTAATGAGATAA+AGG | 0.393267 | 5_2:-66146899 | None:intergenic |
| AAATTGTTATTAAGGACAAA+AGG | 0.408672 | 5_2:+66147093 | Msa0782810:CDS |
| TAGACAAGCAAATGCCATAA+TGG | 0.419514 | 5_2:-66146997 | None:intergenic |
| CGCGGTCGAGGCGTTGTTCG+CGG | 0.436282 | 5_2:-66147034 | None:intergenic |
| TTTCCTTTATCTCATTAAGA+TGG | 0.440153 | 5_2:+66146896 | Msa0782810:CDS |
| AATTGTTATTAAGGACAAAA+GGG | 0.449086 | 5_2:+66147094 | Msa0782810:CDS |
| GTGTCCCTCACGAAGATAGA+AGG | 0.452378 | 5_2:+66146946 | Msa0782810:CDS |
| CGAGGCGTTGTTCGCGGCGA+TGG | 0.453847 | 5_2:-66147028 | None:intergenic |
| CTTAAAGCTCATAGAGCTGC+TGG | 0.464353 | 5_2:+66142703 | Msa0782810:CDS |
| AAAATGCTTAATTTGAACAT+TGG | 0.471214 | 5_2:-66146876 | None:intergenic |
| TCTTCAAGAGACAAAGGAAA+AGG | 0.476352 | 5_2:+66142646 | Msa0782810:CDS |
| TTTGAACATTGGACCCATCA+AGG | 0.481839 | 5_2:-66146865 | None:intergenic |
| TGGGACATTGATGAACTTGA+AGG | 0.483005 | 5_2:+66142580 | Msa0782810:CDS |
| TGAGCTCTTCTTCGCGGTCG+AGG | 0.495022 | 5_2:-66147046 | None:intergenic |
| GTTGTCTGAGCTCTTCTTCG+CGG | 0.502295 | 5_2:-66147052 | None:intergenic |
| AAAAGTAAATCTTCTTCTGA+AGG | 0.511562 | 5_2:-66142604 | None:intergenic |
| TATCTATCAATGGCCTTGAT+GGG | 0.523495 | 5_2:+66146852 | Msa0782810:CDS |
| ACTTATGTTCCAATGTACTA+CGG | 0.548701 | 5_2:+66146924 | Msa0782810:CDS |
| AGGCCGTGACTATCTATCAA+TGG | 0.550277 | 5_2:+66146842 | Msa0782810:intron |
| ATGGCACCTTTGTTCAATTG+GGG | 0.552161 | 5_2:+66142502 | Msa0782810:CDS |
| ATTTCCTTCTATCTTCGTGA+GGG | 0.566146 | 5_2:-66146950 | None:intergenic |
| AAAACGCTAAACAACTCACA+TGG | 0.573149 | 5_2:+66142671 | Msa0782810:CDS |
| AATTCTTCTTCAAGAGACAA+AGG | 0.578590 | 5_2:+66142640 | Msa0782810:CDS |
| AATTTCCTTCTATCTTCGTG+AGG | 0.580854 | 5_2:-66146951 | None:intergenic |
| TGAGGGACACCGTAGTACAT+TGG | 0.593543 | 5_2:-66146933 | None:intergenic |
| AAGATAGAAGGAAATTTGAG+TGG | 0.593881 | 5_2:+66146958 | Msa0782810:CDS |
| TTCGCACCCCAATTGAACAA+AGG | 0.603697 | 5_2:-66142508 | None:intergenic |
| AGGCCATTGATAGATAGTCA+CGG | 0.681425 | 5_2:-66146845 | None:intergenic |
| AAACGCTAAACAACTCACAT+GGG | 0.684108 | 5_2:+66142672 | Msa0782810:CDS |
| GGTGCGAAAGAAAGTCACAA+AGG | 0.727517 | 5_2:+66142523 | Msa0782810:CDS |
| AAGTCACAAAGGAACACCAG+TGG | 0.729436 | 5_2:+66142534 | Msa0782810:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAAAAAAATAATTTTAAT+TGG | - | chr5_2:66144330-66144349 | None:intergenic | 0.0% |
| !! | TAAAAAAAATTATATTTGGA+CGG | - | chr5_2:66143035-66143054 | None:intergenic | 10.0% |
| !! | GACATAAAAAAAATTATATT+TGG | - | chr5_2:66143039-66143058 | None:intergenic | 10.0% |
| !! | TTAATATAACAATTAACTTT+CGG | - | chr5_2:66146540-66146559 | None:intergenic | 10.0% |
| !!! | ATATTTTTAATTATTTAGAG+AGG | + | chr5_2:66146584-66146603 | Msa0782810:intron | 10.0% |
| !!! | TATTTTTAATTATTTAGAGA+GGG | + | chr5_2:66146585-66146604 | Msa0782810:intron | 10.0% |
| !!! | TAATTCAAACATTTTTATAA+GGG | + | chr5_2:66146613-66146632 | Msa0782810:intron | 10.0% |
| !! | GAAGTTTAATTATATTAATT+GGG | - | chr5_2:66146686-66146705 | None:intergenic | 10.0% |
| !! | AGAAGTTTAATTATATTAAT+TGG | - | chr5_2:66146687-66146706 | None:intergenic | 10.0% |
| !!! | ATTATAAATATATTCTAAGG+AGG | - | chr5_2:66143190-66143209 | None:intergenic | 15.0% |
| !! | AATAAATAAAACTCAAGATT+TGG | + | chr5_2:66144941-66144960 | Msa0782810:intron | 15.0% |
| !!! | AATGTTAAGTATTTGTTAAA+AGG | - | chr5_2:66145057-66145076 | None:intergenic | 15.0% |
| !! | TAGAAAGAAAAAAAAAAGTA+AGG | - | chr5_2:66145091-66145110 | None:intergenic | 15.0% |
| !! | TAGAAAGAAAAAAAAAAGTA+AGG | - | chr5_2:66145091-66145110 | None:intergenic | 15.0% |
| !! | TTTATTAAGACGTAATATAA+GGG | - | chr5_2:66145337-66145356 | None:intergenic | 15.0% |
| !! | ATTTATTAAGACGTAATATA+AGG | - | chr5_2:66145338-66145357 | None:intergenic | 15.0% |
| !!! | AATTTAAAATAAGAAGCAAT+TGG | - | chr5_2:66145857-66145876 | None:intergenic | 15.0% |
| !! | TATAGATGTATCAATTTAAT+AGG | - | chr5_2:66146384-66146403 | None:intergenic | 15.0% |
| !! | TAGCAAAATAATAAAAGAAA+AGG | - | chr5_2:66146428-66146447 | None:intergenic | 15.0% |
| !!! | ATTTTTAATTATTTAGAGAG+GGG | + | chr5_2:66146586-66146605 | Msa0782810:intron | 15.0% |
| !!! | GTAATTCAAACATTTTTATA+AGG | + | chr5_2:66146612-66146631 | Msa0782810:intron | 15.0% |
| !!! | CATTTTTACTTTTTAATAAG+TGG | + | chr5_2:66146657-66146676 | Msa0782810:intron | 15.0% |
| !!! | TCCTTTTAAAATTGTTATTA+AGG | + | chr5_2:66147085-66147104 | Msa0782810:CDS | 15.0% |
| !!! | TCCTTAATAACAATTTTAAA+AGG | - | chr5_2:66147089-66147108 | None:intergenic | 15.0% |
| !! | ATGAAAAAAAACAAAAACCT+CGG | - | chr5_2:66142837-66142856 | None:intergenic | 20.0% |
| !!! | TTGTTTTTTTTCATTTTCCT+CGG | + | chr5_2:66142843-66142862 | Msa0782810:intron | 20.0% |
| !! | AAGAACAAAAAATGATCTAT+AGG | + | chr5_2:66143527-66143546 | Msa0782810:intron | 20.0% |
| !! | ATGTAAATTTGAATGTTTGA+TGG | + | chr5_2:66143858-66143877 | Msa0782810:intron | 20.0% |
| !! | ATCAGCTTAAATGTTAAAAA+AGG | + | chr5_2:66144354-66144373 | Msa0782810:intron | 20.0% |
| !! | ATGTTAAAAAAGGAAAAATC+AGG | + | chr5_2:66144364-66144383 | Msa0782810:intron | 20.0% |
| !! | AAATAAAATCTCGACTAATA+AGG | + | chr5_2:66144394-66144413 | Msa0782810:intron | 20.0% |
| !! | TTATTGAGTGAAGATTAAAA+TGG | + | chr5_2:66144823-66144842 | Msa0782810:intron | 20.0% |
| !!! | CATTAAGTGTATAGTTTTAT+TGG | + | chr5_2:66144858-66144877 | Msa0782810:intron | 20.0% |
| !! | ACTTTATAGTAAAATTCATG+TGG | - | chr5_2:66145016-66145035 | None:intergenic | 20.0% |
| !!! | AAAAGGTATGTTAAGTAAAA+TGG | - | chr5_2:66145040-66145059 | None:intergenic | 20.0% |
| !! | AAAGAAACAATTCATGATAT+GGG | - | chr5_2:66145231-66145250 | None:intergenic | 20.0% |
| !! | AAAAGAAACAATTCATGATA+TGG | - | chr5_2:66145232-66145251 | None:intergenic | 20.0% |
| !!! | TATCATGAATTGTTTCTTTT+TGG | + | chr5_2:66145232-66145251 | Msa0782810:intron | 20.0% |
| !! | ATACTCAAATTTATTAACGA+CGG | - | chr5_2:66146138-66146157 | None:intergenic | 20.0% |
| !! | GGATAATAACATAATAAGAA+AGG | - | chr5_2:66146164-66146183 | None:intergenic | 20.0% |
| !!! | GATACTAATTTTAATAGTAG+TGG | + | chr5_2:66146208-66146227 | Msa0782810:intron | 20.0% |
| !!! | TTACTCATGATTTTTTTTAG+TGG | + | chr5_2:66146241-66146260 | Msa0782810:intron | 20.0% |
| !! | AAAATCATTGTTGTAGTTTA+AGG | + | chr5_2:66146354-66146373 | Msa0782810:intron | 20.0% |
| !! | CAAAATAATAAAAGAAAAGG+TGG | - | chr5_2:66146425-66146444 | None:intergenic | 20.0% |
| !!! | TTTTTAATTATTTAGAGAGG+GGG | + | chr5_2:66146587-66146606 | Msa0782810:intron | 20.0% |
| !! | AAAATGCAGATTTAATTCAA+GGG | - | chr5_2:66146770-66146789 | None:intergenic | 20.0% |
| !! | TAAAATGCAGATTTAATTCA+AGG | - | chr5_2:66146771-66146790 | None:intergenic | 20.0% |
| !!! | AATCTGCATTTTATGTTTTT+CGG | + | chr5_2:66146778-66146797 | Msa0782810:intron | 20.0% |
| !!! | TTACAATTTTCCTTGAATTT+AGG | + | chr5_2:66146822-66146841 | Msa0782810:intron | 20.0% |
| !!! | AAAATGCTTAATTTGAACAT+TGG | - | chr5_2:66146879-66146898 | None:intergenic | 20.0% |
| !!! | AAATTGTTATTAAGGACAAA+AGG | + | chr5_2:66147093-66147112 | Msa0782810:CDS | 20.0% |
| !!! | AATTGTTATTAAGGACAAAA+GGG | + | chr5_2:66147094-66147113 | Msa0782810:CDS | 20.0% |
| ! | TAAAAATGGAGAATCCAAAT+TGG | + | chr5_2:66142560-66142579 | Msa0782810:CDS | 25.0% |
| ! | AAAAATGGAGAATCCAAATT+GGG | + | chr5_2:66142561-66142580 | Msa0782810:CDS | 25.0% |
| ! | AAAAGTAAATCTTCTTCTGA+AGG | - | chr5_2:66142607-66142626 | None:intergenic | 25.0% |
| !!! | TCTCTTGAAGAAGAATTTTT+TGG | - | chr5_2:66142637-66142656 | None:intergenic | 25.0% |
| !! | AGCAATTTTCTTTGCATTAT+GGG | + | chr5_2:66142989-66143008 | Msa0782810:intron | 25.0% |
| !!! | TTTTTTTTATGTCCTGTTAG+AGG | + | chr5_2:66143046-66143065 | Msa0782810:intron | 25.0% |
| ! | TCATAGTTGAATAACAACAA+CGG | + | chr5_2:66143299-66143318 | Msa0782810:intron | 25.0% |
| ! | TTCCAATATTTGACTGATAA+TGG | - | chr5_2:66143339-66143358 | None:intergenic | 25.0% |
| ! | AGAATCTTAATCAACTTTCA+AGG | + | chr5_2:66143389-66143408 | Msa0782810:intron | 25.0% |
| !! | TAATCAACTTTCAAGGTTTT+AGG | + | chr5_2:66143396-66143415 | Msa0782810:intron | 25.0% |
| !! | AATCAACTTTCAAGGTTTTA+GGG | + | chr5_2:66143397-66143416 | Msa0782810:intron | 25.0% |
| ! | TTGAAATTCACAAAAGACTA+TGG | - | chr5_2:66143430-66143449 | None:intergenic | 25.0% |
| !!! | AATACTTCTTAGAGAGTATT+GGG | + | chr5_2:66143555-66143574 | Msa0782810:intron | 25.0% |
| ! | AATTAAGAACATCCATTTAG+TGG | - | chr5_2:66143999-66144018 | None:intergenic | 25.0% |
| ! | GTACAAGAACTAGAAATATT+CGG | + | chr5_2:66144158-66144177 | Msa0782810:intron | 25.0% |
| ! | AACTCATTGCAACATAATTT+AGG | - | chr5_2:66144282-66144301 | None:intergenic | 25.0% |
| ! | TATCAATTCACCAAATTTGT+AGG | - | chr5_2:66144460-66144479 | None:intergenic | 25.0% |
| !! | TACAAATTTGGTGAATTGAT+AGG | + | chr5_2:66144459-66144478 | Msa0782810:intron | 25.0% |
| !! | CCAATTTTTATCAATTATGC+AGG | - | chr5_2:66144500-66144519 | None:intergenic | 25.0% |
| ! | CCTGCATAATTGATAAAAAT+TGG | + | chr5_2:66144497-66144516 | Msa0782810:intron | 25.0% |
| ! | TTCAATTCACATGAATGTTA+TGG | - | chr5_2:66144546-66144565 | None:intergenic | 25.0% |
| !!! | GAAGTTTTCTTTAAGTTACA+CGG | + | chr5_2:66144615-66144634 | Msa0782810:intron | 25.0% |
| ! | GGTGTACATTGAATATAATA+CGG | + | chr5_2:66144636-66144655 | Msa0782810:intron | 25.0% |
| ! | GTGTACATTGAATATAATAC+GGG | + | chr5_2:66144637-66144656 | Msa0782810:intron | 25.0% |
| ! | AAGCTAATGTAGATATGATA+TGG | + | chr5_2:66144685-66144704 | Msa0782810:intron | 25.0% |
| ! | GGAGGTTTACTATATATATA+AGG | - | chr5_2:66144987-66145006 | None:intergenic | 25.0% |
| !!! | CTATAAAGTCCCTATTTTAA+CGG | - | chr5_2:66145158-66145177 | None:intergenic | 25.0% |
| ! | AAGAAACAATTCATGATATG+GGG | - | chr5_2:66145230-66145249 | None:intergenic | 25.0% |
| !! | CTTTTCTTTCTTTCAATTCT+TGG | - | chr5_2:66145666-66145685 | None:intergenic | 25.0% |
| ! | TTGAAAGAAAGAAAAGTTTC+CGG | + | chr5_2:66145670-66145689 | Msa0782810:intron | 25.0% |
| ! | TTGTTACCATTATCTCTTAT+AGG | + | chr5_2:66145701-66145720 | Msa0782810:intron | 25.0% |
| ! | TCCCTAAAATAAAAACAACT+GGG | - | chr5_2:66145831-66145850 | None:intergenic | 25.0% |
| ! | ATCCCTAAAATAAAAACAAC+TGG | - | chr5_2:66145832-66145851 | None:intergenic | 25.0% |
| ! | GGAGTAAAATAAAACATGAA+AGG | + | chr5_2:66145901-66145920 | Msa0782810:intron | 25.0% |
| ! | AAGAGAATGAATACTACAAT+AGG | - | chr5_2:66146185-66146204 | None:intergenic | 25.0% |
| !!! | TCATCGATTTATGTCAAAAA+TGG | - | chr5_2:66146517-66146536 | None:intergenic | 25.0% |
| !!! | TTTTAATTATTTAGAGAGGG+GGG | + | chr5_2:66146588-66146607 | Msa0782810:intron | 25.0% |
| !! | TTCAAACATTTTTATAAGGG+AGG | + | chr5_2:66146616-66146635 | Msa0782810:intron | 25.0% |
| !!! | TGTTTTTCGGTTTATGTATT+TGG | + | chr5_2:66146791-66146810 | Msa0782810:intron | 25.0% |
| ! | TTTCCTTTATCTCATTAAGA+TGG | + | chr5_2:66146896-66146915 | Msa0782810:CDS | 25.0% |
| AATTCTTCTTCAAGAGACAA+AGG | + | chr5_2:66142640-66142659 | Msa0782810:CDS | 30.0% | |
| ATAACTAAACCAAACAATGC+AGG | - | chr5_2:66142748-66142767 | None:intergenic | 30.0% | |
| ! | TTGTTTGGTTTAGTTATCGA+CGG | + | chr5_2:66142751-66142770 | Msa0782810:intron | 30.0% |
| GCATTGAAAAATGCAAAAAC+TGG | + | chr5_2:66142792-66142811 | Msa0782810:intron | 30.0% | |
| ! | CAGCAATTTTCTTTGCATTA+TGG | + | chr5_2:66142988-66143007 | Msa0782810:intron | 30.0% |
| GATCCAATAAAATGCAAAAC+TGG | + | chr5_2:66143098-66143117 | Msa0782810:intron | 30.0% | |
| ! | ATGCCAGTTTTGCATTTTAT+TGG | - | chr5_2:66143104-66143123 | None:intergenic | 30.0% |
| TAAATAAGTGCTTTACCAGA+AGG | + | chr5_2:66143272-66143291 | Msa0782810:intron | 30.0% | |
| AAATAAGTGCTTTACCAGAA+GGG | + | chr5_2:66143273-66143292 | Msa0782810:intron | 30.0% | |
| CATAGTTGAATAACAACAAC+GGG | + | chr5_2:66143300-66143319 | Msa0782810:intron | 30.0% | |
| GTCCATTATCAGTCAAATAT+TGG | + | chr5_2:66143334-66143353 | Msa0782810:intron | 30.0% | |
| TCTTGTTCTATGTGAAAATC+TGG | - | chr5_2:66143367-66143386 | None:intergenic | 30.0% | |
| !! | ATCAACTTTCAAGGTTTTAG+GGG | + | chr5_2:66143398-66143417 | Msa0782810:intron | 30.0% |
| AAGATTATGCTATGTATGGA+TGG | + | chr5_2:66143487-66143506 | Msa0782810:intron | 30.0% | |
| ! | ATGGATGGATGCTAATATTT+TGG | + | chr5_2:66143502-66143521 | Msa0782810:intron | 30.0% |
| ! | CAATACTTCTTAGAGAGTAT+TGG | + | chr5_2:66143554-66143573 | Msa0782810:intron | 30.0% |
| ! | TGAATGTTTGATGGCAATAT+TGG | + | chr5_2:66143867-66143886 | Msa0782810:intron | 30.0% |
| ! | GAATGTTTGATGGCAATATT+GGG | + | chr5_2:66143868-66143887 | Msa0782810:intron | 30.0% |
| ! | TCAAGATGTTGTTGATGAAA+GGG | - | chr5_2:66143960-66143979 | None:intergenic | 30.0% |
| TTAGTGGAACTTGAGAATAT+TGG | - | chr5_2:66143983-66144002 | None:intergenic | 30.0% | |
| TATTCTCAAGTTCCACTAAA+TGG | + | chr5_2:66143984-66144003 | Msa0782810:intron | 30.0% | |
| ! | ATTCTTTTCTTTGCTCTTGT+TGG | + | chr5_2:66144025-66144044 | Msa0782810:intron | 30.0% |
| AAGACAAGAAAGTGAAGAAA+AGG | - | chr5_2:66144090-66144109 | None:intergenic | 30.0% | |
| ! | TGTACATGTCATTTCTTACA+AGG | - | chr5_2:66144143-66144162 | None:intergenic | 30.0% |
| AAGACTCAAAGGATTAGAAA+CGG | - | chr5_2:66144237-66144256 | None:intergenic | 30.0% | |
| TTTCTAATCCTTTGAGTCTT+CGG | + | chr5_2:66144237-66144256 | Msa0782810:intron | 30.0% | |
| AGTGTAAAGTTTCTATACAC+TGG | + | chr5_2:66144758-66144777 | Msa0782810:intron | 30.0% | |
| !! | TATTTCGAAAGCATTGACAA+AGG | - | chr5_2:66144917-66144936 | None:intergenic | 30.0% |
| TATAGTAAAATTCATGTGGC+TGG | - | chr5_2:66145012-66145031 | None:intergenic | 30.0% | |
| ! | TTTTAATAAAGAGACACCTC+AGG | + | chr5_2:66145190-66145209 | Msa0782810:intron | 30.0% |
| AATAAAGTGGAGCTATACTT+AGG | - | chr5_2:66145260-66145279 | None:intergenic | 30.0% | |
| ! | TTTAGAGTAGGTAAAGGATT+TGG | - | chr5_2:66145307-66145326 | None:intergenic | 30.0% |
| ! | TGATGATTTAGAGTAGGTAA+AGG | - | chr5_2:66145313-66145332 | None:intergenic | 30.0% |
| ACGTGATTTATGCAAACATA+TGG | - | chr5_2:66145519-66145538 | None:intergenic | 30.0% | |
| !! | AGAAATTCTAGTTTAAGTGG+TGG | - | chr5_2:66145630-66145649 | None:intergenic | 30.0% |
| !! | GAGAGAAATTCTAGTTTAAG+TGG | - | chr5_2:66145633-66145652 | None:intergenic | 30.0% |
| TTTCTTTCAATTCTTGGAAG+TGG | - | chr5_2:66145660-66145679 | None:intergenic | 30.0% | |
| AGAAAGCCTATAAGAGATAA+TGG | - | chr5_2:66145710-66145729 | None:intergenic | 30.0% | |
| AAATAAAAACAACTGGGGAA+GGG | - | chr5_2:66145825-66145844 | None:intergenic | 30.0% | |
| AAAATAAAAACAACTGGGGA+AGG | - | chr5_2:66145826-66145845 | None:intergenic | 30.0% | |
| !!! | TCCCCAGTTGTTTTTATTTT+AGG | + | chr5_2:66145826-66145845 | Msa0782810:intron | 30.0% |
| CCCTAAAATAAAAACAACTG+GGG | - | chr5_2:66145830-66145849 | None:intergenic | 30.0% | |
| !!! | CCCCAGTTGTTTTTATTTTA+GGG | + | chr5_2:66145827-66145846 | Msa0782810:intron | 30.0% |
| AATAAAACATGAAAGGAGAG+TGG | + | chr5_2:66145908-66145927 | Msa0782810:intron | 30.0% | |
| ATAAAACATGAAAGGAGAGT+GGG | + | chr5_2:66145909-66145928 | Msa0782810:intron | 30.0% | |
| AATAATAATTGGAGTGTGCA+AGG | + | chr5_2:66145957-66145976 | Msa0782810:intron | 30.0% | |
| !!! | CTCATGATTTTTTTTAGTGG+TGG | + | chr5_2:66146244-66146263 | Msa0782810:intron | 30.0% |
| TGCATAAAATATGCAAGGTT+GGG | - | chr5_2:66146283-66146302 | None:intergenic | 30.0% | |
| ATGCATAAAATATGCAAGGT+TGG | - | chr5_2:66146284-66146303 | None:intergenic | 30.0% | |
| GACAATGCATAAAATATGCA+AGG | - | chr5_2:66146288-66146307 | None:intergenic | 30.0% | |
| AATAAAAGAAAAGGTGGACA+AGG | - | chr5_2:66146419-66146438 | None:intergenic | 30.0% | |
| AAGCCATCTTAATGAGATAA+AGG | - | chr5_2:66146902-66146921 | None:intergenic | 30.0% | |
| ACTTATGTTCCAATGTACTA+CGG | + | chr5_2:66146924-66146943 | Msa0782810:CDS | 30.0% | |
| AAGATAGAAGGAAATTTGAG+TGG | + | chr5_2:66146958-66146977 | Msa0782810:CDS | 30.0% | |
| !!! | CAGTTGTTTTTTCTCCATTA+TGG | + | chr5_2:66146983-66147002 | Msa0782810:CDS | 30.0% |
| AACACCAGTGGTTGTAAAAA+TGG | + | chr5_2:66142546-66142565 | Msa0782810:CDS | 35.0% | |
| !! | TTCTCCATTTTTACAACCAC+TGG | - | chr5_2:66142553-66142572 | None:intergenic | 35.0% |
| AGTTCATCAATGTCCCAATT+TGG | - | chr5_2:66142577-66142596 | None:intergenic | 35.0% | |
| TCTTCAAGAGACAAAGGAAA+AGG | + | chr5_2:66142646-66142665 | Msa0782810:CDS | 35.0% | |
| AAAACGCTAAACAACTCACA+TGG | + | chr5_2:66142671-66142690 | Msa0782810:CDS | 35.0% | |
| AAACGCTAAACAACTCACAT+GGG | + | chr5_2:66142672-66142691 | Msa0782810:CDS | 35.0% | |
| AATGCAAAAACTGGAATCCT+CGG | + | chr5_2:66142801-66142820 | Msa0782810:intron | 35.0% | |
| ! | TAACTACCGAAATTTTGAGC+CGG | - | chr5_2:66142908-66142927 | None:intergenic | 35.0% |
| CTTCAATCGCTATCACTTTA+TGG | - | chr5_2:66143233-66143252 | None:intergenic | 35.0% | |
| TCTGCATAAAATGCTCTTCA+AGG | - | chr5_2:66143465-66143484 | None:intergenic | 35.0% | |
| GACGAAGATTATGCTATGTA+TGG | + | chr5_2:66143483-66143502 | Msa0782810:intron | 35.0% | |
| ! | TCTATCATTCTATCTGGTTC+AGG | - | chr5_2:66143612-66143631 | None:intergenic | 35.0% |
| TCTCTCTCTATCATTCTATC+TGG | - | chr5_2:66143618-66143637 | None:intergenic | 35.0% | |
| TTTGTTCAAGCTCTTGTTAC+AGG | + | chr5_2:66143895-66143914 | Msa0782810:intron | 35.0% | |
| !! | TGATCTAAGAGGTTTTGGTA+TGG | - | chr5_2:66143928-66143947 | None:intergenic | 35.0% |
| ! | CCAAATGATCTAAGAGGTTT+TGG | - | chr5_2:66143933-66143952 | None:intergenic | 35.0% |
| CCAAAACCTCTTAGATCATT+TGG | + | chr5_2:66143930-66143949 | Msa0782810:intron | 35.0% | |
| ! | GTCAAGATGTTGTTGATGAA+AGG | - | chr5_2:66143961-66143980 | None:intergenic | 35.0% |
| AAAAGGTGGTTGAGTTTCTT+TGG | - | chr5_2:66144073-66144092 | None:intergenic | 35.0% | |
| ACAAGAAAGTGAAGAAAAGG+TGG | - | chr5_2:66144087-66144106 | None:intergenic | 35.0% | |
| TTAACTTCTTGCTTTGCTTC+AGG | + | chr5_2:66144193-66144212 | Msa0782810:intron | 35.0% | |
| !!! | TAGGCTTGTTGCAATTTTGA+AGG | - | chr5_2:66144263-66144282 | None:intergenic | 35.0% |
| TTAATTGGTTGACAGTGTAG+AGG | - | chr5_2:66144315-66144334 | None:intergenic | 35.0% | |
| GAAAAGCTAGATAGTATCGT+GGG | - | chr5_2:66144427-66144446 | None:intergenic | 35.0% | |
| CAAATTTGTAGGAGAAGGTT+AGG | - | chr5_2:66144449-66144468 | None:intergenic | 35.0% | |
| CTAACCTTCTCCTACAAATT+TGG | + | chr5_2:66144447-66144466 | Msa0782810:intron | 35.0% | |
| TTCACCAAATTTGTAGGAGA+AGG | - | chr5_2:66144454-66144473 | None:intergenic | 35.0% | |
| !! | ATTGATAGGAGTTGATGAAG+TGG | + | chr5_2:66144473-66144492 | Msa0782810:intron | 35.0% |
| AGCTGTTCAACCGTTAAAAT+AGG | + | chr5_2:66145145-66145164 | Msa0782810:intron | 35.0% | |
| GCTGTTCAACCGTTAAAATA+GGG | + | chr5_2:66145146-66145165 | Msa0782810:intron | 35.0% | |
| GTGTGTTGAAGAGAATAAAG+TGG | - | chr5_2:66145273-66145292 | None:intergenic | 35.0% | |
| ! | AAGGGATGATGATTTAGAGT+AGG | - | chr5_2:66145319-66145338 | None:intergenic | 35.0% |
| AATGGTAACAATACCAACAC+CGG | - | chr5_2:66145692-66145711 | None:intergenic | 35.0% | |
| AATGGAAGAATGGAGAAAGA+GGG | - | chr5_2:66146013-66146032 | None:intergenic | 35.0% | |
| TAATGGAAGAATGGAGAAAG+AGG | - | chr5_2:66146014-66146033 | None:intergenic | 35.0% | |
| !!! | ATTTTTTTTAGTGGTGGCCA+GGG | + | chr5_2:66146250-66146269 | Msa0782810:intron | 35.0% |
| GCATAAAATATGCAAGGTTG+GGG | - | chr5_2:66146282-66146301 | None:intergenic | 35.0% | |
| ! | TATCTATCAATGGCCTTGAT+GGG | + | chr5_2:66146852-66146871 | Msa0782810:CDS | 35.0% |
| ATTTCCTTCTATCTTCGTGA+GGG | - | chr5_2:66146953-66146972 | None:intergenic | 35.0% | |
| AATTTCCTTCTATCTTCGTG+AGG | - | chr5_2:66146954-66146973 | None:intergenic | 35.0% | |
| TAGACAAGCAAATGCCATAA+TGG | - | chr5_2:66147000-66147019 | None:intergenic | 35.0% | |
| TTATGGCATTTGCTTGTCTA+TGG | + | chr5_2:66147000-66147019 | Msa0782810:CDS | 35.0% | |
| ATGGCACCTTTGTTCAATTG+GGG | + | chr5_2:66142502-66142521 | Msa0782810:CDS | 40.0% | |
| TGGGACATTGATGAACTTGA+AGG | + | chr5_2:66142580-66142599 | Msa0782810:CDS | 40.0% | |
| CAAATTGCTCCTGCATTGTT+TGG | + | chr5_2:66142736-66142755 | Msa0782810:intron | 40.0% | |
| ! | TTTGGTTTAGTTATCGACGG+TGG | + | chr5_2:66142754-66142773 | Msa0782810:intron | 40.0% |
| AAACAAAAACCTCGGCACTT+AGG | - | chr5_2:66142829-66142848 | None:intergenic | 40.0% | |
| ! | TTAACTACCGAGGTTTTCCT+CGG | + | chr5_2:66142869-66142888 | Msa0782810:intron | 40.0% |
| TTAACTACCGAGGAAAACCT+CGG | - | chr5_2:66142879-66142898 | None:intergenic | 40.0% | |
| AAAAGACGAAAATACCCCCT+CGG | - | chr5_2:66142935-66142954 | None:intergenic | 40.0% | |
| TGCTGTTGACACATTGCATA+TGG | - | chr5_2:66142973-66142992 | None:intergenic | 40.0% | |
| CATTATGGGACACACATCTA+TGG | + | chr5_2:66143003-66143022 | Msa0782810:intron | 40.0% | |
| !! | GTGACTGATTTTCCTCTAAC+AGG | - | chr5_2:66143061-66143080 | None:intergenic | 40.0% |
| AAGGAGGAGATATTCTACAG+AGG | - | chr5_2:66143174-66143193 | None:intergenic | 40.0% | |
| TTCAACTATGAGAACCCTTC+TGG | - | chr5_2:66143290-66143309 | None:intergenic | 40.0% | |
| GTTGAATAACAACAACGGGT+TGG | + | chr5_2:66143304-66143323 | Msa0782810:intron | 40.0% | |
| !! | TCTTAGAGAGTATTGGGCAT+TGG | + | chr5_2:66143561-66143580 | Msa0782810:intron | 40.0% |
| ! | CTATCTGGTTCAGGTTATGA+AGG | - | chr5_2:66143603-66143622 | None:intergenic | 40.0% |
| ATGATAGAGAGAGATAGACG+TGG | + | chr5_2:66143624-66143643 | Msa0782810:intron | 40.0% | |
| GCGAAACTACATGATTGCAA+TGG | - | chr5_2:66143711-66143730 | None:intergenic | 40.0% | |
| ! | ATTCTTTGAAGGTCGAGCAA+CGG | - | chr5_2:66143758-66143777 | None:intergenic | 40.0% |
| TTTCATTTCAATGCTCCCCA+GGG | - | chr5_2:66143785-66143804 | None:intergenic | 40.0% | |
| ! | TTTTCATTTCAATGCTCCCC+AGG | - | chr5_2:66143786-66143805 | None:intergenic | 40.0% |
| ACATGATGATACATGCTCAC+AGG | - | chr5_2:66144118-66144137 | None:intergenic | 40.0% | |
| GGAAAAGCTAGATAGTATCG+TGG | - | chr5_2:66144428-66144447 | None:intergenic | 40.0% | |
| GTAAAATTCATGTGGCTGGA+TGG | - | chr5_2:66145008-66145027 | None:intergenic | 40.0% | |
| TTTGCTTGTGCATTCATTCG+TGG | + | chr5_2:66145360-66145379 | Msa0782810:intron | 40.0% | |
| ! | GTGCATTCATTCGTGGTTTT+AGG | + | chr5_2:66145367-66145386 | Msa0782810:intron | 40.0% |
| GAAAGAAAAGTTTCCGGTGT+TGG | + | chr5_2:66145676-66145695 | Msa0782810:intron | 40.0% | |
| ATGAATCAAATCCTCTGCAG+CGG | + | chr5_2:66145760-66145779 | Msa0782810:intron | 40.0% | |
| TTGAGGGAAATGGTTATGCT+CGG | + | chr5_2:66145791-66145810 | Msa0782810:intron | 40.0% | |
| ATGGAAGAATGGAGAAAGAG+GGG | - | chr5_2:66146012-66146031 | None:intergenic | 40.0% | |
| CCTCGTAACTAATGGAAGAA+TGG | - | chr5_2:66146023-66146042 | None:intergenic | 40.0% | |
| CCATTCTTCCATTAGTTACG+AGG | + | chr5_2:66146020-66146039 | Msa0782810:intron | 40.0% | |
| TGGCATACTAACCCCAATTT+GGG | - | chr5_2:66146076-66146095 | None:intergenic | 40.0% | |
| TAGTATGCCACATGATCCAT+CGG | + | chr5_2:66146086-66146105 | Msa0782810:intron | 40.0% | |
| !!! | GATTTTTTTTAGTGGTGGCC+AGG | + | chr5_2:66146249-66146268 | Msa0782810:intron | 40.0% |
| ATAGTCACGGCCTAAATTCA+AGG | - | chr5_2:66146835-66146854 | None:intergenic | 40.0% | |
| AGGCCATTGATAGATAGTCA+CGG | - | chr5_2:66146848-66146867 | None:intergenic | 40.0% | |
| ! | CTATCTATCAATGGCCTTGA+TGG | + | chr5_2:66146851-66146870 | Msa0782810:CDS | 40.0% |
| TTTGAACATTGGACCCATCA+AGG | - | chr5_2:66146868-66146887 | None:intergenic | 40.0% | |
| TTCGCACCCCAATTGAACAA+AGG | - | chr5_2:66142511-66142530 | None:intergenic | 45.0% | |
| GGTGCGAAAGAAAGTCACAA+AGG | + | chr5_2:66142523-66142542 | Msa0782810:CDS | 45.0% | |
| AAGTCACAAAGGAACACCAG+TGG | + | chr5_2:66142534-66142553 | Msa0782810:CDS | 45.0% | |
| CAGCAGCTCTATGAGCTTTA+AGG | - | chr5_2:66142705-66142724 | None:intergenic | 45.0% | |
| CTTAAAGCTCATAGAGCTGC+TGG | + | chr5_2:66142703-66142722 | Msa0782810:CDS | 45.0% | |
| TTAGTTATCGACGGTGGTGT+TGG | + | chr5_2:66142760-66142779 | Msa0782810:intron | 45.0% | |
| ATTTCGGTAGTTAACTGCCG+AGG | + | chr5_2:66142915-66142934 | Msa0782810:intron | 45.0% | |
| TTTCGGTAGTTAACTGCCGA+GGG | + | chr5_2:66142916-66142935 | Msa0782810:intron | 45.0% | |
| TGACACATTGCATATGGCTG+TGG | - | chr5_2:66142967-66142986 | None:intergenic | 45.0% | |
| !! | AGAGAGTATTGGGCATTGGT+TGG | + | chr5_2:66143565-66143584 | Msa0782810:intron | 45.0% |
| ACTTTCTTCTTCCATGCTCG+TGG | - | chr5_2:66143653-66143672 | None:intergenic | 45.0% | |
| TTCGACATTGACGCATACAC+TGG | - | chr5_2:66143681-66143700 | None:intergenic | 45.0% | |
| GTTGCTCGACCTTCAAAGAA+TGG | + | chr5_2:66143757-66143776 | Msa0782810:intron | 45.0% | |
| ACCTTCAAAGAATGGTTCCC+TGG | + | chr5_2:66143765-66143784 | Msa0782810:intron | 45.0% | |
| CCTTCAAAGAATGGTTCCCT+GGG | + | chr5_2:66143766-66143785 | Msa0782810:intron | 45.0% | |
| CTTCAAAGAATGGTTCCCTG+GGG | + | chr5_2:66143767-66143786 | Msa0782810:intron | 45.0% | |
| CAAGCTCTTGTTACAGGAGT+TGG | + | chr5_2:66143901-66143920 | Msa0782810:intron | 45.0% | |
| GGTCAGCCAAATGATCTAAG+AGG | - | chr5_2:66143939-66143958 | None:intergenic | 45.0% | |
| TTTGAAGGCCGAAGACTCAA+AGG | - | chr5_2:66144248-66144267 | None:intergenic | 45.0% | |
| AAATTCATGTGGCTGGATGG+AGG | - | chr5_2:66145005-66145024 | None:intergenic | 45.0% | |
| GGTGTCTATTCATGATCCTG+AGG | - | chr5_2:66145209-66145228 | None:intergenic | 45.0% | |
| !!! | CGTGGTTTTAGGCTTGTTCA+AGG | + | chr5_2:66145378-66145397 | Msa0782810:intron | 45.0% |
| AGAAATGCAAGAACTCACGC+TGG | + | chr5_2:66145586-66145605 | Msa0782810:intron | 45.0% | |
| GAAATGCAAGAACTCACGCT+GGG | + | chr5_2:66145587-66145606 | Msa0782810:intron | 45.0% | |
| TCATGCTAACCTGACGACAA+CGG | - | chr5_2:66145744-66145763 | None:intergenic | 45.0% | |
| TGAATCAAATCCTCTGCAGC+GGG | + | chr5_2:66145761-66145780 | Msa0782810:intron | 45.0% | |
| AATGGAGAAAGAGGGGAAAC+AGG | - | chr5_2:66146005-66146024 | None:intergenic | 45.0% | |
| CTCTCTCTCCTCGTAACTAA+TGG | - | chr5_2:66146031-66146050 | None:intergenic | 45.0% | |
| ACACGTAGGACTACCCAAAT+TGG | + | chr5_2:66146060-66146079 | Msa0782810:intron | 45.0% | |
| CACGTAGGACTACCCAAATT+GGG | + | chr5_2:66146061-66146080 | Msa0782810:intron | 45.0% | |
| ACGTAGGACTACCCAAATTG+GGG | + | chr5_2:66146062-66146081 | Msa0782810:intron | 45.0% | |
| GTGGCATACTAACCCCAATT+TGG | - | chr5_2:66146077-66146096 | None:intergenic | 45.0% | |
| GAAATGCAAGAACACACCGA+TGG | - | chr5_2:66146105-66146124 | None:intergenic | 45.0% | |
| !! | TGAGCTTAGCTGAGTTGGTA+GGG | - | chr5_2:66146310-66146329 | None:intergenic | 45.0% |
| AGGCCGTGACTATCTATCAA+TGG | + | chr5_2:66146842-66146861 | Msa0782810:intron | 45.0% | |
| !! | AAAATTATAAATATATTCTA+AGG | - | chr5_2:66143193-66143212 | None:intergenic | 5.0% |
| !! | ATAATAATAATAAAAAAAAG+AGG | + | chr5_2:66143816-66143835 | Msa0782810:intron | 5.0% |
| !!! | TCTTAAAAAATAATTTTAAT+TGG | + | chr5_2:66144731-66144750 | Msa0782810:intron | 5.0% |
| !! | TTTGAAAAAAATAAAAAAAT+AGG | + | chr5_2:66145880-66145899 | Msa0782810:intron | 5.0% |
| !! | AACAATAAAATAATAATAAT+TGG | + | chr5_2:66145946-66145965 | Msa0782810:intron | 5.0% |
| TCCTCGGTAGTTAACTACCG+AGG | + | chr5_2:66142859-66142878 | Msa0782810:intron | 50.0% | |
| ACCTCGGTAGTTAACTACCG+AGG | - | chr5_2:66142863-66142882 | None:intergenic | 50.0% | |
| ! | CTGCAGCCGGCTCAAAATTT+CGG | + | chr5_2:66142899-66142918 | Msa0782810:intron | 50.0% |
| TTCGGTAGTTAACTGCCGAG+GGG | + | chr5_2:66142917-66142936 | Msa0782810:intron | 50.0% | |
| GCTGTTCCGATATAACCCAC+TGG | + | chr5_2:66143729-66143748 | Msa0782810:intron | 50.0% | |
| CCCAGGGAACCATTCTTTGA+AGG | - | chr5_2:66143769-66143788 | None:intergenic | 50.0% | |
| TTGTTGTCACCGTTGTCGTC+AGG | + | chr5_2:66145732-66145751 | Msa0782810:intron | 50.0% | |
| ! | GGGAGTGTGATTGAGGGAAA+TGG | + | chr5_2:66145781-66145800 | Msa0782810:intron | 50.0% |
| GAGAGAGAGAACAGACACGT+AGG | + | chr5_2:66146046-66146065 | Msa0782810:intron | 50.0% | |
| GAACACACCGATGGATCATG+TGG | - | chr5_2:66146096-66146115 | None:intergenic | 50.0% | |
| !! | GTGAGCTTAGCTGAGTTGGT+AGG | - | chr5_2:66146311-66146330 | None:intergenic | 50.0% |
| TGAGGGACACCGTAGTACAT+TGG | - | chr5_2:66146936-66146955 | None:intergenic | 50.0% | |
| GTGTCCCTCACGAAGATAGA+AGG | + | chr5_2:66146946-66146965 | Msa0782810:CDS | 50.0% | |
| GTTGTCTGAGCTCTTCTTCG+CGG | - | chr5_2:66147055-66147074 | None:intergenic | 50.0% | |
| ! | GTTATCGACGGTGGTGTTGG+TGG | + | chr5_2:66142763-66142782 | Msa0782810:intron | 55.0% |
| CCTCGGTAGTTAACTGCAGC+CGG | + | chr5_2:66142886-66142905 | Msa0782810:intron | 55.0% | |
| TCGGTAGTTAACTGCCGAGG+GGG | + | chr5_2:66142918-66142937 | Msa0782810:intron | 55.0% | |
| AGACGTGGATTCCACGAGCA+TGG | + | chr5_2:66143639-66143658 | Msa0782810:intron | 55.0% | |
| !! | CGGTGGCCAGTGGGTTATAT+CGG | - | chr5_2:66143738-66143757 | None:intergenic | 55.0% |
| ! | CTTTGAAGGTCGAGCAACGG+TGG | - | chr5_2:66143755-66143774 | None:intergenic | 55.0% |
| ! | TGCAGCGGGAGTGTGATTGA+GGG | + | chr5_2:66145775-66145794 | Msa0782810:intron | 55.0% |
| CAAGGTTGGGGTTCAAACCC+TGG | - | chr5_2:66146270-66146289 | None:intergenic | 55.0% | |
| CCTCGTGAGCTTAGCTGAGT+TGG | - | chr5_2:66146315-66146334 | None:intergenic | 55.0% | |
| CCAACTCAGCTAAGCTCACG+AGG | + | chr5_2:66146312-66146331 | Msa0782810:intron | 55.0% | |
| ! | TCCTCGGTACCTAAGTGCCG+AGG | + | chr5_2:66142817-66142836 | Msa0782810:intron | 60.0% |
| ! | ACCTCGGCACTTAGGTACCG+AGG | - | chr5_2:66142821-66142840 | None:intergenic | 60.0% |
| CCGGCTGCAGTTAACTACCG+AGG | - | chr5_2:66142889-66142908 | None:intergenic | 60.0% | |
| CAATCACACTCCCGCTGCAG+AGG | - | chr5_2:66145774-66145793 | None:intergenic | 60.0% | |
| ! | CTGCAGCGGGAGTGTGATTG+AGG | + | chr5_2:66145774-66145793 | Msa0782810:intron | 60.0% |
| TGAGCTCTTCTTCGCGGTCG+AGG | - | chr5_2:66147049-66147068 | None:intergenic | 60.0% | |
| GTCGAGCAACGGTGGCCAGT+GGG | - | chr5_2:66143747-66143766 | None:intergenic | 65.0% | |
| GGTCGAGCAACGGTGGCCAG+TGG | - | chr5_2:66143748-66143767 | None:intergenic | 70.0% | |
| !! | CGAGGCGTTGTTCGCGGCGA+TGG | - | chr5_2:66147031-66147050 | None:intergenic | 70.0% |
| !! | CGCGGTCGAGGCGTTGTTCG+CGG | - | chr5_2:66147037-66147056 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 66142502 | 66147121 | 66142502 | ID=Msa0782810;Name=Msa0782810 |
| chr5_2 | mRNA | 66142502 | 66147121 | 66142502 | ID=Msa0782810-mRNA-1;Parent=Msa0782810;Name=Msa0782810-mRNA-1;_AED=0.44;_eAED=0.46;_QI=0|0|0|0.5|1|1|2|0|166 |
| chr5_2 | exon | 66142502 | 66142724 | 66142502 | ID=Msa0782810-mRNA-1:exon:19912;Parent=Msa0782810-mRNA-1 |
| chr5_2 | exon | 66146844 | 66147121 | 66146844 | ID=Msa0782810-mRNA-1:exon:19913;Parent=Msa0782810-mRNA-1 |
| chr5_2 | CDS | 66142502 | 66142724 | 66142502 | ID=Msa0782810-mRNA-1:cds;Parent=Msa0782810-mRNA-1 |
| chr5_2 | CDS | 66146844 | 66147121 | 66146844 | ID=Msa0782810-mRNA-1:cds;Parent=Msa0782810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
