Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0791080 | sp|A2BIJ3|BSDC1_DANRE | 28.319 | 226 | 140 | 5 | 45 | 269 | 17 | 221 | 1.28e-17 | 88.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0791080 | G7IFQ3 | 93.886 | 458 | 25 | 3 | 1 | 456 | 1 | 457 | 0.0 | 784 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0791080 | Msa1109820 | 0.804331 | 2.274211e-49 | -8.615850e-47 |
| Msa0791080 | Msa1250110 | 0.816062 | 6.709697e-52 | -8.615850e-47 |
| Msa0791080 | Msa1250730 | 0.816244 | 6.111828e-52 | -8.615850e-47 |
| Msa0142500 | Msa0791080 | 0.805450 | 1.327461e-49 | -8.615850e-47 |
| Msa0271550 | Msa0791080 | 0.800909 | 1.155274e-48 | -8.615850e-47 |
| Msa0319290 | Msa0791080 | 0.817546 | 3.117512e-52 | -8.615850e-47 |
| Msa0566350 | Msa0791080 | 0.803719 | 3.048677e-49 | -8.615850e-47 |
| Msa0566750 | Msa0791080 | 0.803264 | 3.787606e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0791080 | MtrunA17_Chr2g0287041 | 85.371 | 458 | 22 | 4 | 1 | 456 | 1 | 415 | 0.0 | 708 |
| Msa0791080 | MtrunA17_Chr1g0196521 | 40.079 | 509 | 191 | 15 | 1 | 451 | 1 | 453 | 3.84e-86 | 271 |
| Msa0791080 | MtrunA17_Chr7g0259331 | 39.130 | 460 | 217 | 12 | 1 | 456 | 1 | 401 | 4.62e-72 | 233 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0791080 | AT1G03350.1 | 38.632 | 497 | 211 | 13 | 1 | 445 | 1 | 455 | 3.18e-81 | 259 |
| Msa0791080 | AT4G13110.1 | 52.529 | 257 | 102 | 4 | 18 | 274 | 3 | 239 | 7.54e-78 | 245 |
Find 119 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTTCAATGAGTGGAAATT+AGG | 0.199928 | 5_3:+1931712 | Msa0791080:CDS |
| TTTGTCAAGCGGGCTATTTC+AGG | 0.228356 | 5_3:+1931907 | Msa0791080:CDS |
| GAGTGATGTTAATACGTATT+TGG | 0.262032 | 5_3:+1931669 | Msa0791080:CDS |
| TTGAAATTCACCAAATCTTC+AGG | 0.309635 | 5_3:-1931697 | None:intergenic |
| AGATTGATGATGAGAGATTC+TGG | 0.312970 | 5_3:+1931827 | Msa0791080:CDS |
| GTGGGTGTGTCGTGGTGGTC+TGG | 0.368204 | 5_3:-1931226 | None:intergenic |
| CTTCCTCGGGCATGGAAGGC+TGG | 0.374098 | 5_3:-1932320 | None:intergenic |
| ATGATATCGGCAGCACCGTT+TGG | 0.376169 | 5_3:+1931479 | Msa0791080:CDS |
| CTCTCATCATCAATCTTACT+TGG | 0.378344 | 5_3:-1931820 | None:intergenic |
| ATTTCAATGAGTGGAAATTA+GGG | 0.378747 | 5_3:+1931713 | Msa0791080:CDS |
| AAACTTCGCCCTTGCATCTT+CGG | 0.385563 | 5_3:-1931887 | None:intergenic |
| CGGATTTAGATGCTAGGGTT+TGG | 0.390511 | 5_3:-1931282 | None:intergenic |
| GCGCCGACATCGAGAGAAGC+AGG | 0.391623 | 5_3:-1931412 | None:intergenic |
| GTGTCGTGGTGGTCTGGATC+GGG | 0.391688 | 5_3:-1931220 | None:intergenic |
| TTGTGTGACGGTGGGGAGTC+GGG | 0.391930 | 5_3:-1931181 | None:intergenic |
| GTAATTCTCGAGGACGGATT+CGG | 0.401740 | 5_3:-1931302 | None:intergenic |
| TTTGGATGAGCCTGAAGATT+TGG | 0.408355 | 5_3:+1931687 | Msa0791080:CDS |
| TGTGTCGTGGTGGTCTGGAT+CGG | 0.409740 | 5_3:-1931221 | None:intergenic |
| AACCCCACTGATACTACCTT+TGG | 0.415937 | 5_3:-1931992 | None:intergenic |
| TTATAGTAGATTTGATGTAT+TGG | 0.421066 | 5_3:+1931633 | Msa0791080:CDS |
| GAAACCACCGCTTGGAGCTT+CGG | 0.421978 | 5_3:+1931250 | Msa0791080:CDS |
| GAAGCTCCAAGCGGTGGTTT+CGG | 0.426345 | 5_3:-1931248 | None:intergenic |
| ATTGTGTGACGGTGGGGAGT+CGG | 0.427088 | 5_3:-1931182 | None:intergenic |
| AGGGTTTGTGTTGGATGATA+AGG | 0.428084 | 5_3:+1931732 | Msa0791080:CDS |
| CCGAGGAAGAAGACATTAGT+TGG | 0.450880 | 5_3:+1932334 | Msa0791080:CDS |
| GCTGAGGTTGCCTCGACCAC+GGG | 0.452402 | 5_3:+1932039 | Msa0791080:CDS |
| TTAGAATCAGAATCAGAATC+AGG | 0.454565 | 5_3:-1931550 | None:intergenic |
| ATGAAGATGAGGATCTTAGT+TGG | 0.461281 | 5_3:+1932460 | Msa0791080:CDS |
| TGATGGAGGTGATGATAAGT+TGG | 0.461998 | 5_3:+1932137 | Msa0791080:CDS |
| CCAACTAATGTCTTCTTCCT+CGG | 0.468323 | 5_3:-1932334 | None:intergenic |
| GCTGCTGAATCTATAATTGA+TGG | 0.475562 | 5_3:+1932120 | Msa0791080:CDS |
| GTCTAGTGTTTCTGTAACTG+TGG | 0.476889 | 5_3:+1932188 | Msa0791080:CDS |
| ACCCCACTGATACTACCTTT+GGG | 0.478131 | 5_3:-1931991 | None:intergenic |
| TAGATGCTAGGGTTTGGATC+AGG | 0.480308 | 5_3:-1931276 | None:intergenic |
| GCTCCAAGCGGTGGTTTCGG+TGG | 0.480804 | 5_3:-1931245 | None:intergenic |
| CAACTAATGTCTTCTTCCTC+GGG | 0.483158 | 5_3:-1932333 | None:intergenic |
| GTCGGGTTCGTCGGAGAAAA+CGG | 0.483205 | 5_3:-1931164 | None:intergenic |
| TGCTGAGGTTGCCTCGACCA+CGG | 0.489015 | 5_3:+1932038 | Msa0791080:CDS |
| CACCCACCGAAACCACCGCT+TGG | 0.489105 | 5_3:+1931242 | Msa0791080:CDS |
| GTCTTTAACGGCGCGTGAGG+CGG | 0.489791 | 5_3:-1931386 | None:intergenic |
| CGGCGCGTGAGGCGGCGTCA+CGG | 0.491888 | 5_3:-1931378 | None:intergenic |
| GAAGATTGAAAATGATGAGA+AGG | 0.491908 | 5_3:+1932092 | Msa0791080:CDS |
| AGAAGCAGGGAGGTCTTTAA+CGG | 0.492354 | 5_3:-1931398 | None:intergenic |
| TGTCGGCGCCTCCGTCGCTC+AGG | 0.497970 | 5_3:+1931426 | Msa0791080:CDS |
| TCTTCTTCCTCGGGCATGGA+AGG | 0.499963 | 5_3:-1932324 | None:intergenic |
| GGTCAAGCAATCGATGATAT+CGG | 0.506147 | 5_3:+1931466 | Msa0791080:CDS |
| ATGAAGAGGAGGATCTGAGC+TGG | 0.507710 | 5_3:+1931932 | Msa0791080:CDS |
| AAGATTGAAAATGATGAGAA+GGG | 0.509991 | 5_3:+1932093 | Msa0791080:CDS |
| CGGTGGGGAGTCGGGTTCGT+CGG | 0.510003 | 5_3:-1931173 | None:intergenic |
| AATGTCTTCTTCCTCGGGCA+TGG | 0.512018 | 5_3:-1932328 | None:intergenic |
| CGGATTCGGATTTAGATGCT+AGG | 0.512216 | 5_3:-1931288 | None:intergenic |
| ATTACCATCACCCGTGGTCG+AGG | 0.513378 | 5_3:-1932049 | None:intergenic |
| CTCCAAGCGGTGGTTTCGGT+GGG | 0.515206 | 5_3:-1931244 | None:intergenic |
| TGAAGATGAGGATCTTAGTT+GGG | 0.516562 | 5_3:+1932461 | Msa0791080:CDS |
| TGGATCGGGTTGATCGGAAT+CGG | 0.519263 | 5_3:-1931206 | None:intergenic |
| ATTTGGTGAATTTCAATGAG+TGG | 0.519976 | 5_3:+1931704 | Msa0791080:CDS |
| GTGGTCTGGATCGGGTTGAT+CGG | 0.520661 | 5_3:-1931212 | None:intergenic |
| TTAAGCAAGCCGAAGATGCA+AGG | 0.534094 | 5_3:+1931878 | Msa0791080:CDS |
| GTGGAAATTAGGGTTTGTGT+TGG | 0.536121 | 5_3:+1931723 | Msa0791080:CDS |
| CGAGGAAGAAGACATTAGTT+GGG | 0.539070 | 5_3:+1932335 | Msa0791080:CDS |
| TGAGGCGGCGTCACGGATGA+CGG | 0.540250 | 5_3:-1931371 | None:intergenic |
| AGGTGATGATAAGTTGGAGG+AGG | 0.542302 | 5_3:+1932143 | Msa0791080:CDS |
| TGGGGTTTCTAAACAGAAAG+AGG | 0.543504 | 5_3:+1932008 | Msa0791080:CDS |
| AGCCCAAAGGTAGTATCAGT+GGG | 0.544256 | 5_3:+1931989 | Msa0791080:CDS |
| ATGATGAGAGATTCTGGAGT+AGG | 0.551247 | 5_3:+1931833 | Msa0791080:CDS |
| CTGAAAGTAAGATTGATTTG+CGG | 0.554712 | 5_3:+1932412 | Msa0791080:CDS |
| GTTGCCTCGACCACGGGTGA+TGG | 0.556251 | 5_3:+1932045 | Msa0791080:CDS |
| AATCGGAATTGTGTGACGGT+GGG | 0.557843 | 5_3:-1931189 | None:intergenic |
| AAGGGCGAAGTTTGTCAAGC+GGG | 0.565151 | 5_3:+1931897 | Msa0791080:CDS |
| ATGATGATGATGACGACGAC+GGG | 0.568972 | 5_3:+1931962 | Msa0791080:CDS |
| GGATTCGGATTTAGATGCTA+GGG | 0.570318 | 5_3:-1931287 | None:intergenic |
| CAGGAATCGCTTGAAACCGT+TGG | 0.571487 | 5_3:+1931445 | Msa0791080:CDS |
| TCTAGTGTTTCTGTAACTGT+GGG | 0.574745 | 5_3:+1932189 | Msa0791080:CDS |
| TTCAAGCGATTCCTGAGCGA+CGG | 0.576574 | 5_3:-1931437 | None:intergenic |
| AAGCGATTCCTGAGCGACGG+AGG | 0.576839 | 5_3:-1931434 | None:intergenic |
| GAGGTCTTTAACGGCGCGTG+AGG | 0.578229 | 5_3:-1931389 | None:intergenic |
| ATCGGAATTGTGTGACGGTG+GGG | 0.580065 | 5_3:-1931188 | None:intergenic |
| TGGTTTCGGTGGGTGTGTCG+TGG | 0.580478 | 5_3:-1931234 | None:intergenic |
| AGCTGAATTCTTCGAGATCG+CGG | 0.580738 | 5_3:-1931327 | None:intergenic |
| GGCTATTTCAGGTGATGAAG+AGG | 0.586796 | 5_3:+1931918 | Msa0791080:CDS |
| CGCAGATTATCTCTCACGGT+AGG | 0.589720 | 5_3:+1931512 | Msa0791080:CDS |
| CGCCGACATCGAGAGAAGCA+GGG | 0.591615 | 5_3:-1931411 | None:intergenic |
| ATCATCGATTGCTTGACCAA+CGG | 0.591992 | 5_3:-1931461 | None:intergenic |
| GCCGCCGAAGCTCCAAGCGG+TGG | 0.593461 | 5_3:-1931254 | None:intergenic |
| TGAAGAGGAGGATCTGAGCT+GGG | 0.602076 | 5_3:+1931933 | Msa0791080:CDS |
| CTCCCTGCTTCTCTCGATGT+CGG | 0.602545 | 5_3:+1931409 | Msa0791080:CDS |
| CTGCGCCGTCGATTTCCAAA+CGG | 0.602848 | 5_3:-1931494 | None:intergenic |
| TTTCGGTGGGTGTGTCGTGG+TGG | 0.607468 | 5_3:-1931231 | None:intergenic |
| TAAGCAAGCCGAAGATGCAA+GGG | 0.609465 | 5_3:+1931879 | Msa0791080:CDS |
| GAGCCCAAAGGTAGTATCAG+TGG | 0.610008 | 5_3:+1931988 | Msa0791080:CDS |
| GGGTGATCAAGATGATAAGT+TGG | 0.610527 | 5_3:+1932209 | Msa0791080:CDS |
| GATGATGATGATGACGACGA+CGG | 0.611637 | 5_3:+1931961 | Msa0791080:CDS |
| GCAGATTATCTCTCACGGTA+GGG | 0.614134 | 5_3:+1931513 | Msa0791080:CDS |
| ACCACCGCTTGGAGCTTCGG+CGG | 0.616081 | 5_3:+1931253 | Msa0791080:CDS |
| TGGAGGTGATGATAAGTTGG+AGG | 0.616690 | 5_3:+1932140 | Msa0791080:CDS |
| AAGCCAGCCTTCCATGCCCG+AGG | 0.616699 | 5_3:+1932317 | Msa0791080:CDS |
| GAATCGGAATTGTGTGACGG+TGG | 0.620249 | 5_3:-1931190 | None:intergenic |
| TGTGGCATCAGAAGTGAAGA+CGG | 0.625798 | 5_3:+1932242 | Msa0791080:CDS |
| TAACAGTGGTGAATCGTGCA+AGG | 0.636448 | 5_3:+1932272 | Msa0791080:CDS |
| CAGCACCGTTTGGAAATCGA+CGG | 0.640183 | 5_3:+1931489 | Msa0791080:CDS |
| GAAAGAGGATAATTCTGCTG+AGG | 0.640983 | 5_3:+1932023 | Msa0791080:CDS |
| TATTTCAGGTGATGAAGAGG+AGG | 0.644797 | 5_3:+1931921 | Msa0791080:CDS |
| GATCTCGAAGAATTCAGCTC+CGG | 0.648737 | 5_3:+1931331 | Msa0791080:CDS |
| CTCCGCATTACCATCACCCG+TGG | 0.654377 | 5_3:-1932055 | None:intergenic |
| CAAGGGCGAAGTTTGTCAAG+CGG | 0.659102 | 5_3:+1931896 | Msa0791080:CDS |
| AGCAACTGCTGATGAAGATG+AGG | 0.661092 | 5_3:+1932449 | Msa0791080:CDS |
| GCGGCGGTAATTCTCGAGGA+CGG | 0.675565 | 5_3:-1931308 | None:intergenic |
| GCTGAATCTATAATTGATGG+AGG | 0.679538 | 5_3:+1932123 | Msa0791080:CDS |
| GACCACGGGTGATGGTAATG+CGG | 0.679548 | 5_3:+1932053 | Msa0791080:CDS |
| GATCGCGGCGGTAATTCTCG+AGG | 0.684942 | 5_3:-1931312 | None:intergenic |
| GGAGAATTATGATGACAATG+TGG | 0.699852 | 5_3:+1932164 | Msa0791080:CDS |
| ACGGCGCAGATTATCTCTCA+CGG | 0.701554 | 5_3:+1931508 | Msa0791080:CDS |
| AAGACGGATAATGATAACAG+TGG | 0.716837 | 5_3:+1932258 | Msa0791080:CDS |
| TCGGAATCGGAATTGTGTGA+CGG | 0.726675 | 5_3:-1931193 | None:intergenic |
| CGACATCGAGAGAAGCAGGG+AGG | 0.739980 | 5_3:-1931408 | None:intergenic |
| GACGACGGGTATGAGCCCAA+AGG | 0.745058 | 5_3:+1931976 | Msa0791080:CDS |
| CAGGCCGCCGAAGCTCCAAG+CGG | 0.748749 | 5_3:-1931257 | None:intergenic |
| GCCCAAAGGTAGTATCAGTG+GGG | 0.763111 | 5_3:+1931990 | Msa0791080:CDS |
| TGAATTCTTCGAGATCGCGG+CGG | 0.770339 | 5_3:-1931324 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATAGTAGATTTGATGTAT+TGG | + | chr5_3:1931633-1931652 | Msa0791080:CDS | 20.0% |
| !! | TTATAGTAGATTTGATGTAT+TGG | + | chr5_3:1931633-1931652 | Msa0791080:CDS | 20.0% |
| ! | AATTTCAATGAGTGGAAATT+AGG | + | chr5_3:1931712-1931731 | Msa0791080:CDS | 25.0% |
| ! | ATTTCAATGAGTGGAAATTA+GGG | + | chr5_3:1931713-1931732 | Msa0791080:CDS | 25.0% |
| ! | AAGATTGAAAATGATGAGAA+GGG | + | chr5_3:1932093-1932112 | Msa0791080:CDS | 25.0% |
| !! | TAAGTTGGATGTAAAAAATG+TGG | + | chr5_3:1932224-1932243 | Msa0791080:CDS | 25.0% |
| ! | AAACCAATGATGAAAAAAGA+GGG | + | chr5_3:1932376-1932395 | Msa0791080:CDS | 25.0% |
| ! | AATTTCAATGAGTGGAAATT+AGG | + | chr5_3:1931712-1931731 | Msa0791080:CDS | 25.0% |
| ! | ATTTCAATGAGTGGAAATTA+GGG | + | chr5_3:1931713-1931732 | Msa0791080:CDS | 25.0% |
| ! | AAGATTGAAAATGATGAGAA+GGG | + | chr5_3:1932093-1932112 | Msa0791080:CDS | 25.0% |
| !! | TAAGTTGGATGTAAAAAATG+TGG | + | chr5_3:1932224-1932243 | Msa0791080:CDS | 25.0% |
| ! | AAACCAATGATGAAAAAAGA+GGG | + | chr5_3:1932376-1932395 | Msa0791080:CDS | 25.0% |
| TTAGAATCAGAATCAGAATC+AGG | - | chr5_3:1931553-1931572 | None:intergenic | 30.0% | |
| GAGTGATGTTAATACGTATT+TGG | + | chr5_3:1931669-1931688 | Msa0791080:CDS | 30.0% | |
| TTGAAATTCACCAAATCTTC+AGG | - | chr5_3:1931700-1931719 | None:intergenic | 30.0% | |
| ! | ATTTGGTGAATTTCAATGAG+TGG | + | chr5_3:1931704-1931723 | Msa0791080:CDS | 30.0% |
| GAAGATTGAAAATGATGAGA+AGG | + | chr5_3:1932092-1932111 | Msa0791080:CDS | 30.0% | |
| GAAACCAATGATGAAAAAAG+AGG | + | chr5_3:1932375-1932394 | Msa0791080:CDS | 30.0% | |
| AACCAATGATGAAAAAAGAG+GGG | + | chr5_3:1932377-1932396 | Msa0791080:CDS | 30.0% | |
| !! | CTGAAAGTAAGATTGATTTG+CGG | + | chr5_3:1932412-1932431 | Msa0791080:CDS | 30.0% |
| TTAGAATCAGAATCAGAATC+AGG | - | chr5_3:1931553-1931572 | None:intergenic | 30.0% | |
| GAGTGATGTTAATACGTATT+TGG | + | chr5_3:1931669-1931688 | Msa0791080:CDS | 30.0% | |
| TTGAAATTCACCAAATCTTC+AGG | - | chr5_3:1931700-1931719 | None:intergenic | 30.0% | |
| ! | ATTTGGTGAATTTCAATGAG+TGG | + | chr5_3:1931704-1931723 | Msa0791080:CDS | 30.0% |
| GAAGATTGAAAATGATGAGA+AGG | + | chr5_3:1932092-1932111 | Msa0791080:CDS | 30.0% | |
| GAAACCAATGATGAAAAAAG+AGG | + | chr5_3:1932375-1932394 | Msa0791080:CDS | 30.0% | |
| AACCAATGATGAAAAAAGAG+GGG | + | chr5_3:1932377-1932396 | Msa0791080:CDS | 30.0% | |
| !! | CTGAAAGTAAGATTGATTTG+CGG | + | chr5_3:1932412-1932431 | Msa0791080:CDS | 30.0% |
| !! | GGATGTTTCAATTTTCAAGC+CGG | - | chr5_3:1931353-1931372 | None:intergenic | 35.0% |
| TTGAGTAGTAGTAGTAGTGT+TGG | + | chr5_3:1931598-1931617 | Msa0791080:CDS | 35.0% | |
| CTCTCATCATCAATCTTACT+TGG | - | chr5_3:1931823-1931842 | None:intergenic | 35.0% | |
| !! | AGATTGATGATGAGAGATTC+TGG | + | chr5_3:1931827-1931846 | Msa0791080:CDS | 35.0% |
| GCTGCTGAATCTATAATTGA+TGG | + | chr5_3:1932120-1932139 | Msa0791080:CDS | 35.0% | |
| GCTGAATCTATAATTGATGG+AGG | + | chr5_3:1932123-1932142 | Msa0791080:CDS | 35.0% | |
| GGAGAATTATGATGACAATG+TGG | + | chr5_3:1932164-1932183 | Msa0791080:CDS | 35.0% | |
| ! | TCTAGTGTTTCTGTAACTGT+GGG | + | chr5_3:1932189-1932208 | Msa0791080:CDS | 35.0% |
| AAGACGGATAATGATAACAG+TGG | + | chr5_3:1932258-1932277 | Msa0791080:CDS | 35.0% | |
| !!! | ATCCCCTCTTTTTTCATCAT+TGG | - | chr5_3:1932382-1932401 | None:intergenic | 35.0% |
| ATGAAGATGAGGATCTTAGT+TGG | + | chr5_3:1932460-1932479 | Msa0791080:CDS | 35.0% | |
| TGAAGATGAGGATCTTAGTT+GGG | + | chr5_3:1932461-1932480 | Msa0791080:CDS | 35.0% | |
| !! | GGATGTTTCAATTTTCAAGC+CGG | - | chr5_3:1931353-1931372 | None:intergenic | 35.0% |
| TTGAGTAGTAGTAGTAGTGT+TGG | + | chr5_3:1931598-1931617 | Msa0791080:CDS | 35.0% | |
| CTCTCATCATCAATCTTACT+TGG | - | chr5_3:1931823-1931842 | None:intergenic | 35.0% | |
| !! | AGATTGATGATGAGAGATTC+TGG | + | chr5_3:1931827-1931846 | Msa0791080:CDS | 35.0% |
| GCTGCTGAATCTATAATTGA+TGG | + | chr5_3:1932120-1932139 | Msa0791080:CDS | 35.0% | |
| GCTGAATCTATAATTGATGG+AGG | + | chr5_3:1932123-1932142 | Msa0791080:CDS | 35.0% | |
| GGAGAATTATGATGACAATG+TGG | + | chr5_3:1932164-1932183 | Msa0791080:CDS | 35.0% | |
| ! | TCTAGTGTTTCTGTAACTGT+GGG | + | chr5_3:1932189-1932208 | Msa0791080:CDS | 35.0% |
| AAGACGGATAATGATAACAG+TGG | + | chr5_3:1932258-1932277 | Msa0791080:CDS | 35.0% | |
| !!! | ATCCCCTCTTTTTTCATCAT+TGG | - | chr5_3:1932382-1932401 | None:intergenic | 35.0% |
| ATGAAGATGAGGATCTTAGT+TGG | + | chr5_3:1932460-1932479 | Msa0791080:CDS | 35.0% | |
| TGAAGATGAGGATCTTAGTT+GGG | + | chr5_3:1932461-1932480 | Msa0791080:CDS | 35.0% | |
| GGATTCGGATTTAGATGCTA+GGG | - | chr5_3:1931290-1931309 | None:intergenic | 40.0% | |
| ! | ATCATCGATTGCTTGACCAA+CGG | - | chr5_3:1931464-1931483 | None:intergenic | 40.0% |
| GGTCAAGCAATCGATGATAT+CGG | + | chr5_3:1931466-1931485 | Msa0791080:CDS | 40.0% | |
| TTTGGATGAGCCTGAAGATT+TGG | + | chr5_3:1931687-1931706 | Msa0791080:CDS | 40.0% | |
| GTGGAAATTAGGGTTTGTGT+TGG | + | chr5_3:1931723-1931742 | Msa0791080:CDS | 40.0% | |
| AGGGTTTGTGTTGGATGATA+AGG | + | chr5_3:1931732-1931751 | Msa0791080:CDS | 40.0% | |
| !! | ATGATGAGAGATTCTGGAGT+AGG | + | chr5_3:1931833-1931852 | Msa0791080:CDS | 40.0% |
| ! | TATTTCAGGTGATGAAGAGG+AGG | + | chr5_3:1931921-1931940 | Msa0791080:CDS | 40.0% |
| TGGGGTTTCTAAACAGAAAG+AGG | + | chr5_3:1932008-1932027 | Msa0791080:CDS | 40.0% | |
| GAAAGAGGATAATTCTGCTG+AGG | + | chr5_3:1932023-1932042 | Msa0791080:CDS | 40.0% | |
| TGATGGAGGTGATGATAAGT+TGG | + | chr5_3:1932137-1932156 | Msa0791080:CDS | 40.0% | |
| ! | GTCTAGTGTTTCTGTAACTG+TGG | + | chr5_3:1932188-1932207 | Msa0791080:CDS | 40.0% |
| GGGTGATCAAGATGATAAGT+TGG | + | chr5_3:1932209-1932228 | Msa0791080:CDS | 40.0% | |
| CAACTAATGTCTTCTTCCTC+GGG | - | chr5_3:1932336-1932355 | None:intergenic | 40.0% | |
| CCAACTAATGTCTTCTTCCT+CGG | - | chr5_3:1932337-1932356 | None:intergenic | 40.0% | |
| CGAGGAAGAAGACATTAGTT+GGG | + | chr5_3:1932335-1932354 | Msa0791080:CDS | 40.0% | |
| GGATTCGGATTTAGATGCTA+GGG | - | chr5_3:1931290-1931309 | None:intergenic | 40.0% | |
| ! | ATCATCGATTGCTTGACCAA+CGG | - | chr5_3:1931464-1931483 | None:intergenic | 40.0% |
| GGTCAAGCAATCGATGATAT+CGG | + | chr5_3:1931466-1931485 | Msa0791080:CDS | 40.0% | |
| TTTGGATGAGCCTGAAGATT+TGG | + | chr5_3:1931687-1931706 | Msa0791080:CDS | 40.0% | |
| GTGGAAATTAGGGTTTGTGT+TGG | + | chr5_3:1931723-1931742 | Msa0791080:CDS | 40.0% | |
| AGGGTTTGTGTTGGATGATA+AGG | + | chr5_3:1931732-1931751 | Msa0791080:CDS | 40.0% | |
| !! | ATGATGAGAGATTCTGGAGT+AGG | + | chr5_3:1931833-1931852 | Msa0791080:CDS | 40.0% |
| ! | TATTTCAGGTGATGAAGAGG+AGG | + | chr5_3:1931921-1931940 | Msa0791080:CDS | 40.0% |
| TGGGGTTTCTAAACAGAAAG+AGG | + | chr5_3:1932008-1932027 | Msa0791080:CDS | 40.0% | |
| GAAAGAGGATAATTCTGCTG+AGG | + | chr5_3:1932023-1932042 | Msa0791080:CDS | 40.0% | |
| TGATGGAGGTGATGATAAGT+TGG | + | chr5_3:1932137-1932156 | Msa0791080:CDS | 40.0% | |
| ! | GTCTAGTGTTTCTGTAACTG+TGG | + | chr5_3:1932188-1932207 | Msa0791080:CDS | 40.0% |
| GGGTGATCAAGATGATAAGT+TGG | + | chr5_3:1932209-1932228 | Msa0791080:CDS | 40.0% | |
| CAACTAATGTCTTCTTCCTC+GGG | - | chr5_3:1932336-1932355 | None:intergenic | 40.0% | |
| CCAACTAATGTCTTCTTCCT+CGG | - | chr5_3:1932337-1932356 | None:intergenic | 40.0% | |
| CGAGGAAGAAGACATTAGTT+GGG | + | chr5_3:1932335-1932354 | Msa0791080:CDS | 40.0% | |
| AATCGGAATTGTGTGACGGT+GGG | - | chr5_3:1931192-1931211 | None:intergenic | 45.0% | |
| TCGGAATCGGAATTGTGTGA+CGG | - | chr5_3:1931196-1931215 | None:intergenic | 45.0% | |
| TAGATGCTAGGGTTTGGATC+AGG | - | chr5_3:1931279-1931298 | None:intergenic | 45.0% | |
| CGGATTTAGATGCTAGGGTT+TGG | - | chr5_3:1931285-1931304 | None:intergenic | 45.0% | |
| CGGATTCGGATTTAGATGCT+AGG | - | chr5_3:1931291-1931310 | None:intergenic | 45.0% | |
| ! | GTAATTCTCGAGGACGGATT+CGG | - | chr5_3:1931305-1931324 | None:intergenic | 45.0% |
| AGCTGAATTCTTCGAGATCG+CGG | - | chr5_3:1931330-1931349 | None:intergenic | 45.0% | |
| GATCTCGAAGAATTCAGCTC+CGG | + | chr5_3:1931331-1931350 | Msa0791080:CDS | 45.0% | |
| AGAAGCAGGGAGGTCTTTAA+CGG | - | chr5_3:1931401-1931420 | None:intergenic | 45.0% | |
| GCAGATTATCTCTCACGGTA+GGG | + | chr5_3:1931513-1931532 | Msa0791080:CDS | 45.0% | |
| TTAAGCAAGCCGAAGATGCA+AGG | + | chr5_3:1931878-1931897 | Msa0791080:CDS | 45.0% | |
| TAAGCAAGCCGAAGATGCAA+GGG | + | chr5_3:1931879-1931898 | Msa0791080:CDS | 45.0% | |
| AAACTTCGCCCTTGCATCTT+CGG | - | chr5_3:1931890-1931909 | None:intergenic | 45.0% | |
| !! | TTTGTCAAGCGGGCTATTTC+AGG | + | chr5_3:1931907-1931926 | Msa0791080:CDS | 45.0% |
| ! | GGCTATTTCAGGTGATGAAG+AGG | + | chr5_3:1931918-1931937 | Msa0791080:CDS | 45.0% |
| ! | GATGATGATGATGACGACGA+CGG | + | chr5_3:1931961-1931980 | Msa0791080:CDS | 45.0% |
| ! | ATGATGATGATGACGACGAC+GGG | + | chr5_3:1931962-1931981 | Msa0791080:CDS | 45.0% |
| AGCCCAAAGGTAGTATCAGT+GGG | + | chr5_3:1931989-1932008 | Msa0791080:CDS | 45.0% | |
| ACCCCACTGATACTACCTTT+GGG | - | chr5_3:1931994-1932013 | None:intergenic | 45.0% | |
| AACCCCACTGATACTACCTT+TGG | - | chr5_3:1931995-1932014 | None:intergenic | 45.0% | |
| ! | TGGAGGTGATGATAAGTTGG+AGG | + | chr5_3:1932140-1932159 | Msa0791080:CDS | 45.0% |
| ! | AGGTGATGATAAGTTGGAGG+AGG | + | chr5_3:1932143-1932162 | Msa0791080:CDS | 45.0% |
| TGTGGCATCAGAAGTGAAGA+CGG | + | chr5_3:1932242-1932261 | Msa0791080:CDS | 45.0% | |
| TAACAGTGGTGAATCGTGCA+AGG | + | chr5_3:1932272-1932291 | Msa0791080:CDS | 45.0% | |
| CCGAGGAAGAAGACATTAGT+TGG | + | chr5_3:1932334-1932353 | Msa0791080:CDS | 45.0% | |
| AGCAACTGCTGATGAAGATG+AGG | + | chr5_3:1932449-1932468 | Msa0791080:CDS | 45.0% | |
| AATCGGAATTGTGTGACGGT+GGG | - | chr5_3:1931192-1931211 | None:intergenic | 45.0% | |
| TCGGAATCGGAATTGTGTGA+CGG | - | chr5_3:1931196-1931215 | None:intergenic | 45.0% | |
| TAGATGCTAGGGTTTGGATC+AGG | - | chr5_3:1931279-1931298 | None:intergenic | 45.0% | |
| CGGATTTAGATGCTAGGGTT+TGG | - | chr5_3:1931285-1931304 | None:intergenic | 45.0% | |
| CGGATTCGGATTTAGATGCT+AGG | - | chr5_3:1931291-1931310 | None:intergenic | 45.0% | |
| ! | GTAATTCTCGAGGACGGATT+CGG | - | chr5_3:1931305-1931324 | None:intergenic | 45.0% |
| AGCTGAATTCTTCGAGATCG+CGG | - | chr5_3:1931330-1931349 | None:intergenic | 45.0% | |
| GATCTCGAAGAATTCAGCTC+CGG | + | chr5_3:1931331-1931350 | Msa0791080:CDS | 45.0% | |
| AGAAGCAGGGAGGTCTTTAA+CGG | - | chr5_3:1931401-1931420 | None:intergenic | 45.0% | |
| GCAGATTATCTCTCACGGTA+GGG | + | chr5_3:1931513-1931532 | Msa0791080:CDS | 45.0% | |
| TTAAGCAAGCCGAAGATGCA+AGG | + | chr5_3:1931878-1931897 | Msa0791080:CDS | 45.0% | |
| TAAGCAAGCCGAAGATGCAA+GGG | + | chr5_3:1931879-1931898 | Msa0791080:CDS | 45.0% | |
| AAACTTCGCCCTTGCATCTT+CGG | - | chr5_3:1931890-1931909 | None:intergenic | 45.0% | |
| !! | TTTGTCAAGCGGGCTATTTC+AGG | + | chr5_3:1931907-1931926 | Msa0791080:CDS | 45.0% |
| ! | GGCTATTTCAGGTGATGAAG+AGG | + | chr5_3:1931918-1931937 | Msa0791080:CDS | 45.0% |
| ! | GATGATGATGATGACGACGA+CGG | + | chr5_3:1931961-1931980 | Msa0791080:CDS | 45.0% |
| ! | ATGATGATGATGACGACGAC+GGG | + | chr5_3:1931962-1931981 | Msa0791080:CDS | 45.0% |
| AGCCCAAAGGTAGTATCAGT+GGG | + | chr5_3:1931989-1932008 | Msa0791080:CDS | 45.0% | |
| ACCCCACTGATACTACCTTT+GGG | - | chr5_3:1931994-1932013 | None:intergenic | 45.0% | |
| AACCCCACTGATACTACCTT+TGG | - | chr5_3:1931995-1932014 | None:intergenic | 45.0% | |
| ! | TGGAGGTGATGATAAGTTGG+AGG | + | chr5_3:1932140-1932159 | Msa0791080:CDS | 45.0% |
| ! | AGGTGATGATAAGTTGGAGG+AGG | + | chr5_3:1932143-1932162 | Msa0791080:CDS | 45.0% |
| TGTGGCATCAGAAGTGAAGA+CGG | + | chr5_3:1932242-1932261 | Msa0791080:CDS | 45.0% | |
| TAACAGTGGTGAATCGTGCA+AGG | + | chr5_3:1932272-1932291 | Msa0791080:CDS | 45.0% | |
| CCGAGGAAGAAGACATTAGT+TGG | + | chr5_3:1932334-1932353 | Msa0791080:CDS | 45.0% | |
| AGCAACTGCTGATGAAGATG+AGG | + | chr5_3:1932449-1932468 | Msa0791080:CDS | 45.0% | |
| ATCGGAATTGTGTGACGGTG+GGG | - | chr5_3:1931191-1931210 | None:intergenic | 50.0% | |
| GAATCGGAATTGTGTGACGG+TGG | - | chr5_3:1931193-1931212 | None:intergenic | 50.0% | |
| !! | TGGATCGGGTTGATCGGAAT+CGG | - | chr5_3:1931209-1931228 | None:intergenic | 50.0% |
| TGAATTCTTCGAGATCGCGG+CGG | - | chr5_3:1931327-1931346 | None:intergenic | 50.0% | |
| TTCAAGCGATTCCTGAGCGA+CGG | - | chr5_3:1931440-1931459 | None:intergenic | 50.0% | |
| CAGGAATCGCTTGAAACCGT+TGG | + | chr5_3:1931445-1931464 | Msa0791080:CDS | 50.0% | |
| ATGATATCGGCAGCACCGTT+TGG | + | chr5_3:1931479-1931498 | Msa0791080:CDS | 50.0% | |
| CAGCACCGTTTGGAAATCGA+CGG | + | chr5_3:1931489-1931508 | Msa0791080:CDS | 50.0% | |
| ACGGCGCAGATTATCTCTCA+CGG | + | chr5_3:1931508-1931527 | Msa0791080:CDS | 50.0% | |
| CGCAGATTATCTCTCACGGT+AGG | + | chr5_3:1931512-1931531 | Msa0791080:CDS | 50.0% | |
| CAAGGGCGAAGTTTGTCAAG+CGG | + | chr5_3:1931896-1931915 | Msa0791080:CDS | 50.0% | |
| AAGGGCGAAGTTTGTCAAGC+GGG | + | chr5_3:1931897-1931916 | Msa0791080:CDS | 50.0% | |
| ATGAAGAGGAGGATCTGAGC+TGG | + | chr5_3:1931932-1931951 | Msa0791080:CDS | 50.0% | |
| TGAAGAGGAGGATCTGAGCT+GGG | + | chr5_3:1931933-1931952 | Msa0791080:CDS | 50.0% | |
| GAGCCCAAAGGTAGTATCAG+TGG | + | chr5_3:1931988-1932007 | Msa0791080:CDS | 50.0% | |
| GCCCAAAGGTAGTATCAGTG+GGG | + | chr5_3:1931990-1932009 | Msa0791080:CDS | 50.0% | |
| AATGTCTTCTTCCTCGGGCA+TGG | - | chr5_3:1932331-1932350 | None:intergenic | 50.0% | |
| ATCGGAATTGTGTGACGGTG+GGG | - | chr5_3:1931191-1931210 | None:intergenic | 50.0% | |
| GAATCGGAATTGTGTGACGG+TGG | - | chr5_3:1931193-1931212 | None:intergenic | 50.0% | |
| !! | TGGATCGGGTTGATCGGAAT+CGG | - | chr5_3:1931209-1931228 | None:intergenic | 50.0% |
| TGAATTCTTCGAGATCGCGG+CGG | - | chr5_3:1931327-1931346 | None:intergenic | 50.0% | |
| TTCAAGCGATTCCTGAGCGA+CGG | - | chr5_3:1931440-1931459 | None:intergenic | 50.0% | |
| CAGGAATCGCTTGAAACCGT+TGG | + | chr5_3:1931445-1931464 | Msa0791080:CDS | 50.0% | |
| ATGATATCGGCAGCACCGTT+TGG | + | chr5_3:1931479-1931498 | Msa0791080:CDS | 50.0% | |
| CAGCACCGTTTGGAAATCGA+CGG | + | chr5_3:1931489-1931508 | Msa0791080:CDS | 50.0% | |
| ACGGCGCAGATTATCTCTCA+CGG | + | chr5_3:1931508-1931527 | Msa0791080:CDS | 50.0% | |
| CGCAGATTATCTCTCACGGT+AGG | + | chr5_3:1931512-1931531 | Msa0791080:CDS | 50.0% | |
| CAAGGGCGAAGTTTGTCAAG+CGG | + | chr5_3:1931896-1931915 | Msa0791080:CDS | 50.0% | |
| AAGGGCGAAGTTTGTCAAGC+GGG | + | chr5_3:1931897-1931916 | Msa0791080:CDS | 50.0% | |
| ATGAAGAGGAGGATCTGAGC+TGG | + | chr5_3:1931932-1931951 | Msa0791080:CDS | 50.0% | |
| TGAAGAGGAGGATCTGAGCT+GGG | + | chr5_3:1931933-1931952 | Msa0791080:CDS | 50.0% | |
| GAGCCCAAAGGTAGTATCAG+TGG | + | chr5_3:1931988-1932007 | Msa0791080:CDS | 50.0% | |
| GCCCAAAGGTAGTATCAGTG+GGG | + | chr5_3:1931990-1932009 | Msa0791080:CDS | 50.0% | |
| AATGTCTTCTTCCTCGGGCA+TGG | - | chr5_3:1932331-1932350 | None:intergenic | 50.0% | |
| GTCGGGTTCGTCGGAGAAAA+CGG | - | chr5_3:1931167-1931186 | None:intergenic | 55.0% | |
| ATTGTGTGACGGTGGGGAGT+CGG | - | chr5_3:1931185-1931204 | None:intergenic | 55.0% | |
| !! | GTGGTCTGGATCGGGTTGAT+CGG | - | chr5_3:1931215-1931234 | None:intergenic | 55.0% |
| TGTGTCGTGGTGGTCTGGAT+CGG | - | chr5_3:1931224-1931243 | None:intergenic | 55.0% | |
| GAAGCTCCAAGCGGTGGTTT+CGG | - | chr5_3:1931251-1931270 | None:intergenic | 55.0% | |
| GAAACCACCGCTTGGAGCTT+CGG | + | chr5_3:1931250-1931269 | Msa0791080:CDS | 55.0% | |
| CTCCCTGCTTCTCTCGATGT+CGG | + | chr5_3:1931409-1931428 | Msa0791080:CDS | 55.0% | |
| !! | CTGCGCCGTCGATTTCCAAA+CGG | - | chr5_3:1931497-1931516 | None:intergenic | 55.0% |
| ATTACCATCACCCGTGGTCG+AGG | - | chr5_3:1932052-1932071 | None:intergenic | 55.0% | |
| ! | GACCACGGGTGATGGTAATG+CGG | + | chr5_3:1932053-1932072 | Msa0791080:CDS | 55.0% |
| TCTTCTTCCTCGGGCATGGA+AGG | - | chr5_3:1932327-1932346 | None:intergenic | 55.0% | |
| GTCGGGTTCGTCGGAGAAAA+CGG | - | chr5_3:1931167-1931186 | None:intergenic | 55.0% | |
| ATTGTGTGACGGTGGGGAGT+CGG | - | chr5_3:1931185-1931204 | None:intergenic | 55.0% | |
| !! | GTGGTCTGGATCGGGTTGAT+CGG | - | chr5_3:1931215-1931234 | None:intergenic | 55.0% |
| TGTGTCGTGGTGGTCTGGAT+CGG | - | chr5_3:1931224-1931243 | None:intergenic | 55.0% | |
| GAAGCTCCAAGCGGTGGTTT+CGG | - | chr5_3:1931251-1931270 | None:intergenic | 55.0% | |
| GAAACCACCGCTTGGAGCTT+CGG | + | chr5_3:1931250-1931269 | Msa0791080:CDS | 55.0% | |
| CTCCCTGCTTCTCTCGATGT+CGG | + | chr5_3:1931409-1931428 | Msa0791080:CDS | 55.0% | |
| !! | CTGCGCCGTCGATTTCCAAA+CGG | - | chr5_3:1931497-1931516 | None:intergenic | 55.0% |
| ATTACCATCACCCGTGGTCG+AGG | - | chr5_3:1932052-1932071 | None:intergenic | 55.0% | |
| ! | GACCACGGGTGATGGTAATG+CGG | + | chr5_3:1932053-1932072 | Msa0791080:CDS | 55.0% |
| TCTTCTTCCTCGGGCATGGA+AGG | - | chr5_3:1932327-1932346 | None:intergenic | 55.0% | |
| TTGTGTGACGGTGGGGAGTC+GGG | - | chr5_3:1931184-1931203 | None:intergenic | 60.0% | |
| GTGTCGTGGTGGTCTGGATC+GGG | - | chr5_3:1931223-1931242 | None:intergenic | 60.0% | |
| TTTCGGTGGGTGTGTCGTGG+TGG | - | chr5_3:1931234-1931253 | None:intergenic | 60.0% | |
| TGGTTTCGGTGGGTGTGTCG+TGG | - | chr5_3:1931237-1931256 | None:intergenic | 60.0% | |
| CTCCAAGCGGTGGTTTCGGT+GGG | - | chr5_3:1931247-1931266 | None:intergenic | 60.0% | |
| GCGGCGGTAATTCTCGAGGA+CGG | - | chr5_3:1931311-1931330 | None:intergenic | 60.0% | |
| GATCGCGGCGGTAATTCTCG+AGG | - | chr5_3:1931315-1931334 | None:intergenic | 60.0% | |
| GTCTTTAACGGCGCGTGAGG+CGG | - | chr5_3:1931389-1931408 | None:intergenic | 60.0% | |
| GAGGTCTTTAACGGCGCGTG+AGG | - | chr5_3:1931392-1931411 | None:intergenic | 60.0% | |
| CGACATCGAGAGAAGCAGGG+AGG | - | chr5_3:1931411-1931430 | None:intergenic | 60.0% | |
| CGCCGACATCGAGAGAAGCA+GGG | - | chr5_3:1931414-1931433 | None:intergenic | 60.0% | |
| AAGCGATTCCTGAGCGACGG+AGG | - | chr5_3:1931437-1931456 | None:intergenic | 60.0% | |
| GACGACGGGTATGAGCCCAA+AGG | + | chr5_3:1931976-1931995 | Msa0791080:CDS | 60.0% | |
| TGCTGAGGTTGCCTCGACCA+CGG | + | chr5_3:1932038-1932057 | Msa0791080:CDS | 60.0% | |
| CTCCGCATTACCATCACCCG+TGG | - | chr5_3:1932058-1932077 | None:intergenic | 60.0% | |
| TTGTGTGACGGTGGGGAGTC+GGG | - | chr5_3:1931184-1931203 | None:intergenic | 60.0% | |
| GTGTCGTGGTGGTCTGGATC+GGG | - | chr5_3:1931223-1931242 | None:intergenic | 60.0% | |
| TTTCGGTGGGTGTGTCGTGG+TGG | - | chr5_3:1931234-1931253 | None:intergenic | 60.0% | |
| TGGTTTCGGTGGGTGTGTCG+TGG | - | chr5_3:1931237-1931256 | None:intergenic | 60.0% | |
| CTCCAAGCGGTGGTTTCGGT+GGG | - | chr5_3:1931247-1931266 | None:intergenic | 60.0% | |
| GCGGCGGTAATTCTCGAGGA+CGG | - | chr5_3:1931311-1931330 | None:intergenic | 60.0% | |
| GATCGCGGCGGTAATTCTCG+AGG | - | chr5_3:1931315-1931334 | None:intergenic | 60.0% | |
| GTCTTTAACGGCGCGTGAGG+CGG | - | chr5_3:1931389-1931408 | None:intergenic | 60.0% | |
| GAGGTCTTTAACGGCGCGTG+AGG | - | chr5_3:1931392-1931411 | None:intergenic | 60.0% | |
| CGACATCGAGAGAAGCAGGG+AGG | - | chr5_3:1931411-1931430 | None:intergenic | 60.0% | |
| CGCCGACATCGAGAGAAGCA+GGG | - | chr5_3:1931414-1931433 | None:intergenic | 60.0% | |
| AAGCGATTCCTGAGCGACGG+AGG | - | chr5_3:1931437-1931456 | None:intergenic | 60.0% | |
| GACGACGGGTATGAGCCCAA+AGG | + | chr5_3:1931976-1931995 | Msa0791080:CDS | 60.0% | |
| TGCTGAGGTTGCCTCGACCA+CGG | + | chr5_3:1932038-1932057 | Msa0791080:CDS | 60.0% | |
| CTCCGCATTACCATCACCCG+TGG | - | chr5_3:1932058-1932077 | None:intergenic | 60.0% | |
| GTGGGTGTGTCGTGGTGGTC+TGG | - | chr5_3:1931229-1931248 | None:intergenic | 65.0% | |
| CACCCACCGAAACCACCGCT+TGG | + | chr5_3:1931242-1931261 | Msa0791080:CDS | 65.0% | |
| GCTCCAAGCGGTGGTTTCGG+TGG | - | chr5_3:1931248-1931267 | None:intergenic | 65.0% | |
| ACCACCGCTTGGAGCTTCGG+CGG | + | chr5_3:1931253-1931272 | Msa0791080:CDS | 65.0% | |
| TGAGGCGGCGTCACGGATGA+CGG | - | chr5_3:1931374-1931393 | None:intergenic | 65.0% | |
| ! | GCGCCGACATCGAGAGAAGC+AGG | - | chr5_3:1931415-1931434 | None:intergenic | 65.0% |
| GCTGAGGTTGCCTCGACCAC+GGG | + | chr5_3:1932039-1932058 | Msa0791080:CDS | 65.0% | |
| GTTGCCTCGACCACGGGTGA+TGG | + | chr5_3:1932045-1932064 | Msa0791080:CDS | 65.0% | |
| AAGCCAGCCTTCCATGCCCG+AGG | + | chr5_3:1932317-1932336 | Msa0791080:CDS | 65.0% | |
| CTTCCTCGGGCATGGAAGGC+TGG | - | chr5_3:1932323-1932342 | None:intergenic | 65.0% | |
| GTGGGTGTGTCGTGGTGGTC+TGG | - | chr5_3:1931229-1931248 | None:intergenic | 65.0% | |
| CACCCACCGAAACCACCGCT+TGG | + | chr5_3:1931242-1931261 | Msa0791080:CDS | 65.0% | |
| GCTCCAAGCGGTGGTTTCGG+TGG | - | chr5_3:1931248-1931267 | None:intergenic | 65.0% | |
| ACCACCGCTTGGAGCTTCGG+CGG | + | chr5_3:1931253-1931272 | Msa0791080:CDS | 65.0% | |
| TGAGGCGGCGTCACGGATGA+CGG | - | chr5_3:1931374-1931393 | None:intergenic | 65.0% | |
| ! | GCGCCGACATCGAGAGAAGC+AGG | - | chr5_3:1931415-1931434 | None:intergenic | 65.0% |
| GCTGAGGTTGCCTCGACCAC+GGG | + | chr5_3:1932039-1932058 | Msa0791080:CDS | 65.0% | |
| GTTGCCTCGACCACGGGTGA+TGG | + | chr5_3:1932045-1932064 | Msa0791080:CDS | 65.0% | |
| AAGCCAGCCTTCCATGCCCG+AGG | + | chr5_3:1932317-1932336 | Msa0791080:CDS | 65.0% | |
| CTTCCTCGGGCATGGAAGGC+TGG | - | chr5_3:1932323-1932342 | None:intergenic | 65.0% | |
| CGGTGGGGAGTCGGGTTCGT+CGG | - | chr5_3:1931176-1931195 | None:intergenic | 70.0% | |
| CAGGCCGCCGAAGCTCCAAG+CGG | - | chr5_3:1931260-1931279 | None:intergenic | 70.0% | |
| CGGTGGGGAGTCGGGTTCGT+CGG | - | chr5_3:1931176-1931195 | None:intergenic | 70.0% | |
| CAGGCCGCCGAAGCTCCAAG+CGG | - | chr5_3:1931260-1931279 | None:intergenic | 70.0% | |
| GCCGCCGAAGCTCCAAGCGG+TGG | - | chr5_3:1931257-1931276 | None:intergenic | 75.0% | |
| TGTCGGCGCCTCCGTCGCTC+AGG | + | chr5_3:1931426-1931445 | Msa0791080:CDS | 75.0% | |
| GCCGCCGAAGCTCCAAGCGG+TGG | - | chr5_3:1931257-1931276 | None:intergenic | 75.0% | |
| TGTCGGCGCCTCCGTCGCTC+AGG | + | chr5_3:1931426-1931445 | Msa0791080:CDS | 75.0% | |
| ! | CGGCGCGTGAGGCGGCGTCA+CGG | - | chr5_3:1931381-1931400 | None:intergenic | 80.0% |
| ! | CGGCGCGTGAGGCGGCGTCA+CGG | - | chr5_3:1931381-1931400 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 1931148 | 1932518 | 1931148 | ID=Msa0791080;Name=Msa0791080 |
| chr5_3 | mRNA | 1931148 | 1932518 | 1931148 | ID=Msa0791080-mRNA-1;Parent=Msa0791080;Name=Msa0791080-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|456 |
| chr5_3 | exon | 1931148 | 1932518 | 1931148 | ID=Msa0791080-mRNA-1:exon:738;Parent=Msa0791080-mRNA-1 |
| chr5_3 | CDS | 1931148 | 1932518 | 1931148 | ID=Msa0791080-mRNA-1:cds;Parent=Msa0791080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
