AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0566350

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0566350 MtrunA17_Chr8g0381341 86.741 626 44 3 1 623 1 590 0.0 1035
Msa0566350 MtrunA17_Chr8g0381341 99.167 120 1 0 669 788 542 661 3.70e-73 251
Msa0566350 MtrunA17_Chr5g0419511 56.627 83 1 1 474 556 34 81 2.77e-17 77.4
Msa0566350 MtrunA17_Chr1g0203001 51.724 87 41 1 671 757 342 427 1.05e-15 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0566350 AT1G24560.1 51.495 602 232 9 4 582 2 566 1.61e-176 523
Msa0566350 AT1G24560.1 63.333 120 42 2 669 788 561 678 6.92e-33 136

Find 233 sgRNAs with CRISPR-Local

Find 391 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATATTTATCCCAATTCTT+AGG 0.135778 4_1:+67416497 Msa0566350:five_prime_UTR
TTCCGAACCTCTCTTATAAT+TGG 0.162753 4_1:+67420806 Msa0566350:exon
ATGAGGTTTCTGAGAGTTTA+AGG 0.165822 4_1:+67417284 Msa0566350:CDS
ACTGGAATTGAGAAGATTTC+TGG 0.197534 4_1:+67416950 Msa0566350:CDS
GAAGGAGTTTGTTAATAATT+TGG 0.197675 4_1:+67417333 Msa0566350:CDS
TTCAAATTTAGTAAGATTCT+TGG 0.227068 4_1:+67417775 Msa0566350:CDS
CATTCTATGGTCGAGTTCTT+TGG 0.227216 4_1:-67418277 None:intergenic
TCTGGTAAGGTGAATGGTTT+TGG 0.265573 4_1:+67416968 Msa0566350:CDS
TTCAAAAGAAAGGGCTTTGC+AGG 0.266771 4_1:-67419413 None:intergenic
GACTTCATTCAACCGATTAA+AGG 0.284071 4_1:+67416748 Msa0566350:CDS
CTGAATGAGTTATTCAAGTA+TGG 0.287155 4_1:+67419660 Msa0566350:CDS
CTCCTTTCAGACTCAGTTCA+TGG 0.288879 4_1:+67419481 Msa0566350:CDS
AACTGCAGCCGTTGAGGGTT+TGG 0.288903 4_1:+67417228 Msa0566350:CDS
TGCTTCCATGAAGGCATAAA+AGG 0.290640 4_1:-67421023 None:intergenic
CATTGATGATGCTGGTTATT+CGG 0.297833 4_1:+67417447 Msa0566350:CDS
TGCAATTTCCCAGTTTGAAC+AGG 0.299905 4_1:+67421140 Msa0566350:three_prime_UTR
CCTCCACCCGGTGCATTCTA+TGG 0.302232 4_1:-67418290 None:intergenic
AATGTGATTTAAGGTTAGTT+TGG 0.307224 4_1:-67416261 None:intergenic
GGAGAGGGATTTGGTTGTTA+AGG 0.312356 4_1:+67417249 Msa0566350:CDS
CACTGTGCAGGCTGGTGCTT+TGG 0.313975 4_1:+67417976 Msa0566350:intron
CAATGTTGATTGTAGATTCT+TGG 0.329932 4_1:+67419621 Msa0566350:intron
AAAGTGGCAGCAAAGGAAAA+AGG 0.331138 4_1:-67419520 None:intergenic
AGATTTCTCTGCTGCATCTC+TGG 0.331404 4_1:-67420571 None:intergenic
AAGACTTGAGGGGCCGAAAT+AGG 0.339224 4_1:+67420679 Msa0566350:CDS
GAGTGAGGGTTTGCAGTTGA+AGG 0.339449 4_1:+67417315 Msa0566350:CDS
ATATGATAAACCCTAAGAAT+TGG 0.340104 4_1:-67416508 None:intergenic
TGCTGCATCTCTGGCTGCCA+TGG 0.341080 4_1:-67420562 None:intergenic
ATTGAATGTAATTGTGGTTT+AGG 0.343298 4_1:-67416458 None:intergenic
GAATTTGATGTGATCGGAAT+TGG 0.344001 4_1:-67416617 None:intergenic
TGAAGTCTGTAACTCCGTTT+TGG 0.347141 4_1:-67416732 None:intergenic
AATGTACGCGCCTCTTTGGC+TGG 0.351712 4_1:+67417517 Msa0566350:CDS
ATTTCCGACCCTGTTCAAAC+TGG 0.351908 4_1:-67421149 None:intergenic
GTTAAGGAAAAGGATCAAAT+TGG 0.357356 4_1:+67417649 Msa0566350:CDS
TGAGGGTTTGGAGAGGGATT+TGG 0.360266 4_1:+67417240 Msa0566350:CDS
TCGAGTCATATGATGGTTAC+TGG 0.361394 4_1:+67416932 Msa0566350:CDS
TGTCATGTTGCAGCAGCATT+TGG 0.363506 4_1:+67420959 Msa0566350:three_prime_UTR
CTTGAGCAAGCACCTTTAAT+CGG 0.365333 4_1:-67416760 None:intergenic
TCACAGTCTCATCTAAATTC+TGG 0.366217 4_1:-67417618 None:intergenic
GGTTGCGTGATGATGCTGTT+AGG 0.370427 4_1:+67416813 Msa0566350:CDS
TATGGTCGAGTTCTTTGGCC+TGG 0.370910 4_1:-67418272 None:intergenic
ATACATATCTAGGCCTATTT+CGG 0.371352 4_1:-67420692 None:intergenic
CATATTTATCCCAATTCTTA+GGG 0.378994 4_1:+67416498 Msa0566350:five_prime_UTR
CAAGAAGCTGCTGCAGGCAC+AGG 0.383789 4_1:+67418601 Msa0566350:CDS
TGAGAATGTACGCGCCTCTT+TGG 0.389318 4_1:+67417513 Msa0566350:CDS
ATTGAAAACACAACCATGTA+TGG 0.395655 4_1:-67421086 None:intergenic
AGCACACTGTGAATGAATTA+AGG 0.395713 4_1:+67418041 Msa0566350:CDS
TAATAATTTGGAATCAAAGA+TGG 0.396116 4_1:+67417345 Msa0566350:CDS
ATCAAATTGGTTCTTTGCTT+AGG 0.398406 4_1:+67417662 Msa0566350:CDS
TGTCATGTGGTCATGGGCTG+TGG 0.399721 4_1:+67418438 Msa0566350:CDS
GGTATGGCTGCGGTGACTTA+TGG 0.401013 4_1:+67417031 Msa0566350:CDS
ATACGGAAGCGCGATGAATT+CGG 0.405883 4_1:+67416788 Msa0566350:CDS
GGCTTTACTACATTAAGAAC+AGG 0.406993 4_1:-67420920 None:intergenic
CATGGCCAGCATACATATCT+AGG 0.407682 4_1:-67420702 None:intergenic
GGTAATTTGCGACAGGCATT+TGG 0.412774 4_1:+67418460 Msa0566350:CDS
GAATTATGAGATTGCTATTG+AGG 0.413784 4_1:+67417153 Msa0566350:CDS
GGTATTGTGGGCGTGAGCAC+AGG 0.419071 4_1:-67416228 None:intergenic
AGAAACTGCGAGGCAATTAG+AGG 0.421139 4_1:+67416865 Msa0566350:CDS
AAGATTTCTGGTAAGGTGAA+TGG 0.421879 4_1:+67416962 Msa0566350:CDS
TGGCTCGGCATGGACTTTGT+TGG 0.426457 4_1:+67420729 Msa0566350:CDS
GGTTAGTTTGGAGTGAAGAT+TGG 0.426514 4_1:-67416249 None:intergenic
ATGCTATTCAATTAAATGTC+CGG 0.428651 4_1:+67416536 Msa0566350:exon
GCTTTCTGAGTCGTTGTTTG+TGG 0.428931 4_1:+67417471 Msa0566350:CDS
TATGATAAACCCTAAGAATT+GGG 0.432534 4_1:-67416507 None:intergenic
TCTTATAAACACTACAAATC+TGG 0.432821 4_1:-67417423 None:intergenic
TGCTTTGGAGGATGTTGTTA+AGG 0.434993 4_1:+67417991 Msa0566350:CDS
GACTGTGAATAGGTTAGTTA+AGG 0.436099 4_1:+67417633 Msa0566350:CDS
AAAATGTGTTCATCCCTTGC+TGG 0.440413 4_1:-67419390 None:intergenic
TGTGCAGGCTGGTGCTTTGG+AGG 0.442489 4_1:+67417979 Msa0566350:intron
TTTAAGGAAGGAAGAGAGTG+AGG 0.442980 4_1:+67417300 Msa0566350:CDS
GAAAATGGGTTGAGGGAGGT+TGG 0.445747 4_1:+67417745 Msa0566350:CDS
GTTGTTTGTGGCGCAAGAAA+CGG 0.448855 4_1:+67417483 Msa0566350:CDS
TGAGAACAGAGAAGACTTGA+GGG 0.449088 4_1:+67420668 Msa0566350:CDS
ATGGTCGAGTTCTTTGGCCT+GGG 0.450706 4_1:-67418271 None:intergenic
TGCGAGGCAATTAGAGGAAT+CGG 0.452953 4_1:+67416871 Msa0566350:CDS
CTCTTTATAATGCAGATTGA+GGG 0.453284 4_1:+67418517 Msa0566350:CDS
TCTCTTTATAATGCAGATTG+AGG 0.453775 4_1:+67418516 Msa0566350:CDS
AAGGAATGTACAGAATAATC+AGG 0.455113 4_1:-67421004 None:intergenic
AAAAGTTAGGGATTTGGTTG+AGG 0.457748 4_1:+67417579 Msa0566350:CDS
TAACAGCATCATCACGCAAC+CGG 0.459925 4_1:-67416811 None:intergenic
GACTGATACGCAACAGCAAA+CGG 0.460239 4_1:+67420764 Msa0566350:CDS
ACAGAATGATGCAAGTGTTA+AGG 0.465407 4_1:+67417096 Msa0566350:CDS
CACATCAAATTCACCTTCAC+AGG 0.466563 4_1:+67416628 Msa0566350:CDS
TTTAGTAAGATTCTTGGAGA+TGG 0.466672 4_1:+67417781 Msa0566350:CDS
TTCCAATTATAAGAGAGGTT+CGG 0.467159 4_1:-67420808 None:intergenic
CATTAGCAGCTTCAAAAGAA+AGG 0.469658 4_1:-67419423 None:intergenic
AATCGAATTGAATGTAATTG+TGG 0.470084 4_1:-67416464 None:intergenic
GCAAACGGCTTCTAACGAAA+TGG 0.471284 4_1:+67420779 Msa0566350:CDS
TGCTATTGAGGTTTCGCAGT+TGG 0.472675 4_1:+67417165 Msa0566350:CDS
AGCGGCAGAAAATGGGTTGA+GGG 0.474191 4_1:+67417738 Msa0566350:CDS
ATAAGAGCGTGAGGAGGAAG+AGG 0.475459 4_1:-67416094 None:intergenic
GGCATCTAAGTCGCCGGCGC+CGG 0.475732 4_1:-67416555 None:intergenic
ACCATGCTTGAGCTTTAGCT+TGG 0.476966 4_1:-67419689 None:intergenic
GCAGAGCAAGAAGCTGCTGC+AGG 0.479033 4_1:+67418595 Msa0566350:CDS
TTCAATTAAATGTCCGGCGC+CGG 0.481437 4_1:+67416542 Msa0566350:exon
TGGAGTGAAGATTGGTATTG+TGG 0.482769 4_1:-67416241 None:intergenic
GATTCTCGCCGAGCTTGATC+AGG 0.482851 4_1:+67416679 Msa0566350:CDS
CGGCGACTTAGATGCCGATT+CGG 0.483746 4_1:+67416562 Msa0566350:CDS
ATTTAGATGAGACTGTGAAT+AGG 0.488303 4_1:+67417623 Msa0566350:CDS
TTAAGGAAGGAAGAGAGTGA+GGG 0.489133 4_1:+67417301 Msa0566350:CDS
CGCCGCCGAGAAAGCCAAAA+CGG 0.489160 4_1:+67416718 Msa0566350:CDS
AAGAAAACTGCAGCCGTTGA+GGG 0.489646 4_1:+67417223 Msa0566350:CDS
AATTTCTTAATTCAGAAGAC+TGG 0.491064 4_1:+67416379 Msa0566350:five_prime_UTR
GAATTCATCGCGCTTCCGTA+TGG 0.491635 4_1:-67416786 None:intergenic
GGAGTGAAGATTGGTATTGT+GGG 0.493649 4_1:-67416240 None:intergenic
AGAGACAGCAGCTGCTGCCA+TGG 0.494691 4_1:+67420545 Msa0566350:CDS
CAACTCATTTGAAGACGGAT+TGG 0.497391 4_1:-67417710 None:intergenic
TGCTGGCCATGGCAGTGGCT+CGG 0.499416 4_1:+67420714 Msa0566350:CDS
TTAAGGCTAGGGATCAAGCT+AGG 0.500217 4_1:+67417113 Msa0566350:CDS
GCCATGGCAGTGGCTCGGCA+TGG 0.506711 4_1:+67420719 Msa0566350:CDS
ACTTGAGGTCTTCTAGACTA+AGG 0.506773 4_1:+67420607 Msa0566350:CDS
TATAAGATCATTGATGATGC+TGG 0.507256 4_1:+67417439 Msa0566350:CDS
ACGCGCCTCTTTGGCTGGGA+TGG 0.508680 4_1:+67417522 Msa0566350:CDS
GGCTGTGGGTAATTTGCGAC+AGG 0.508723 4_1:+67418453 Msa0566350:CDS
CGATGGTGAAAGATCAAAGA+TGG 0.512405 4_1:-67416128 None:intergenic
AATTGAGAAGATTTCTGGTA+AGG 0.512747 4_1:+67416955 Msa0566350:CDS
ACAGGGGATTGATGTGGATG+AGG 0.513000 4_1:-67416210 None:intergenic
GGTTTCTGAGAGTTTAAGGA+AGG 0.515527 4_1:+67417288 Msa0566350:CDS
ATTAGCAGCTTCAAAAGAAA+GGG 0.517822 4_1:-67419422 None:intergenic
TGAACAGCAATTTGTGGCAC+AGG 0.518504 4_1:+67418627 Msa0566350:CDS
GAATAGGTTAGTTAAGGAAA+AGG 0.519027 4_1:+67417639 Msa0566350:CDS
GCAGATTGAGGGGCTAATGA+TGG 0.523203 4_1:+67418528 Msa0566350:CDS
ATGTACGCGCCTCTTTGGCT+GGG 0.523765 4_1:+67417518 Msa0566350:CDS
AGAGGATGAAATATACACTT+TGG 0.525090 4_1:+67417852 Msa0566350:CDS
AATTCAGAAGACTGGTTGGT+TGG 0.528171 4_1:+67416387 Msa0566350:five_prime_UTR
GTTGATTGTAGATTCTTGGT+GGG 0.528212 4_1:+67419625 Msa0566350:intron
CAGGGGATTGATGTGGATGA+GGG 0.528843 4_1:-67416209 None:intergenic
GGGATTGATGTGGATGAGGG+AGG 0.529228 4_1:-67416206 None:intergenic
TAGCGGCAGAAAATGGGTTG+AGG 0.529571 4_1:+67417737 Msa0566350:CDS
AAAATTTCCAATTATAAGAG+AGG 0.530012 4_1:-67420813 None:intergenic
TGCTGGAGATGAGCAGTGAA+AGG 0.534476 4_1:-67419373 None:intergenic
AGCCGTTGAGGGTTTGGAGA+GGG 0.534744 4_1:+67417234 Msa0566350:CDS
TCTTAATTCAGAAGACTGGT+TGG 0.535569 4_1:+67416383 Msa0566350:five_prime_UTR
GTTGCGTGATGATGCTGTTA+GGG 0.539375 4_1:+67416814 Msa0566350:CDS
TGTTGATTGTAGATTCTTGG+TGG 0.540306 4_1:+67419624 Msa0566350:intron
TCTCTTCAAGTTCCTCCACC+CGG 0.540700 4_1:-67418302 None:intergenic
CCATAGAATGCACCGGGTGG+AGG 0.541339 4_1:+67418290 Msa0566350:CDS
GTCATGTGGTCATGGGCTGT+GGG 0.542457 4_1:+67418439 Msa0566350:CDS
CAGTTCATGGTTCATACTCA+AGG 0.543350 4_1:+67419494 Msa0566350:CDS
AACCATGAACTGAGTCTGAA+AGG 0.543461 4_1:-67419483 None:intergenic
ATCCCTCTCCAAACCCTCAA+CGG 0.544511 4_1:-67417236 None:intergenic
GAAATATACCGGTATGGCTG+CGG 0.544973 4_1:+67417021 Msa0566350:CDS
GAAGAAAACTGCAGCCGTTG+AGG 0.546363 4_1:+67417222 Msa0566350:CDS
TGATTGTAGATTCTTGGTGG+GGG 0.547544 4_1:+67419627 Msa0566350:intron
TGACAATGATCGACCAACAC+TGG 0.549017 4_1:-67420941 None:intergenic
GAGTGCTTTGTCAAAGAGGA+TGG 0.550359 4_1:+67417684 Msa0566350:CDS
GTATTGTGGGCGTGAGCACA+GGG 0.550762 4_1:-67416227 None:intergenic
AGGTGTTGAACAGCAATTTG+TGG 0.550763 4_1:+67418621 Msa0566350:CDS
TTTCCGACCCTGTTCAAACT+GGG 0.551067 4_1:-67421148 None:intergenic
ATGATGCAAGTGTTAAGGCT+AGG 0.551573 4_1:+67417101 Msa0566350:CDS
TAATGTAACGACAGTATATG+TGG 0.552792 4_1:-67421048 None:intergenic
ATTGTGGTTTAGGTTGTCGA+TGG 0.553011 4_1:-67416448 None:intergenic
TGATGCAAGTGTTAAGGCTA+GGG 0.553468 4_1:+67417102 Msa0566350:CDS
TAAGGATGAGAAGTTGAATG+AGG 0.556456 4_1:+67417267 Msa0566350:CDS
TTCACTGCTCATCTCCAGCA+AGG 0.557887 4_1:+67419376 Msa0566350:CDS
GACGTCGCTGAGCACCGAAT+CGG 0.557895 4_1:-67416576 None:intergenic
GCAGTTGTCAACGCTCAAGC+AGG 0.558280 4_1:+67420464 Msa0566350:intron
TTAGGAGTGCTTTGTCAAAG+AGG 0.560450 4_1:+67417680 Msa0566350:CDS
TTGAGAACAGAGAAGACTTG+AGG 0.560542 4_1:+67420667 Msa0566350:CDS
TGCTGTTAGGGAGAAGGAAG+AGG 0.562775 4_1:+67416826 Msa0566350:CDS
TTTCCCAGTTTGAACAGGGT+CGG 0.563294 4_1:+67421145 Msa0566350:three_prime_UTR
CTTGAGGTCTTCTAGACTAA+GGG 0.563951 4_1:+67420608 Msa0566350:CDS
CTAGATATGTATGCTGGCCA+TGG 0.566839 4_1:+67420703 Msa0566350:CDS
AAAGGATGAAGTTACGAAAG+TGG 0.568159 4_1:-67419536 None:intergenic
TCCAAGCTAAAGCTCAAGCA+TGG 0.569147 4_1:+67419688 Msa0566350:CDS
GTCGCAGAAATATACCGGTA+TGG 0.569668 4_1:+67417015 Msa0566350:CDS
TGAGAAATCGAGTCATATGA+TGG 0.570001 4_1:+67416925 Msa0566350:CDS
TAAGCAGCACATAGAAGCCC+AGG 0.570404 4_1:+67418254 Msa0566350:CDS
ATGTATGCTGGCCATGGCAG+TGG 0.573801 4_1:+67420709 Msa0566350:CDS
GCTGGAGATGAGCAGTGAAA+GGG 0.573872 4_1:-67419372 None:intergenic
CCGGTATATTTCTGCGACCG+CGG 0.574878 4_1:-67417010 None:intergenic
AACTCGACCATAGAATGCAC+CGG 0.575532 4_1:+67418283 Msa0566350:CDS
TGCTTGCTCAAGAAGCCATA+CGG 0.576060 4_1:+67416771 Msa0566350:CDS
TAATGTAGTAAAGCCAGTGT+TGG 0.577204 4_1:+67420928 Msa0566350:three_prime_UTR
CGAATCGGCATCTAAGTCGC+CGG 0.577434 4_1:-67416561 None:intergenic
TTGATTGTAGATTCTTGGTG+GGG 0.578249 4_1:+67419626 Msa0566350:intron
GGTACGTTGTTCTCACGTCA+CGG 0.578556 4_1:+67416408 Msa0566350:five_prime_UTR
TGATGTGATCGGAATTGGAT+CGG 0.580529 4_1:-67416612 None:intergenic
CTGAAGAAGAAATTAACAGA+TGG 0.583950 4_1:+67418563 Msa0566350:CDS
TATTAGTGATTTGAGAGATG+AGG 0.584521 4_1:+67417195 Msa0566350:CDS
CAAGCTCGGCGAGAATCTCA+CGG 0.585055 4_1:-67416673 None:intergenic
ATAGGCCTAGATATGTATGC+TGG 0.587227 4_1:+67420697 Msa0566350:CDS
ATAAGTCACCGCAGCCATAC+CGG 0.588731 4_1:-67417029 None:intergenic
TAGAGGAATCGGCGAAGGAG+CGG 0.590365 4_1:+67416882 Msa0566350:CDS
CCGCGGTCGCAGAAATATAC+CGG 0.590801 4_1:+67417010 Msa0566350:CDS
GCAATTTCCCAGTTTGAACA+GGG 0.593362 4_1:+67421141 Msa0566350:three_prime_UTR
CTCTCAAGTTAGCAGACTTG+AGG 0.593940 4_1:+67420592 Msa0566350:CDS
AATCTATACATGAGTTGACT+AGG 0.596241 4_1:+67417545 Msa0566350:CDS
GGTGGAGGAACTTGAAGAGA+AGG 0.596408 4_1:+67418305 Msa0566350:CDS
AGTTACGAAAGTGGCAGCAA+AGG 0.597277 4_1:-67419527 None:intergenic
GCAATTAGAGGAATCGGCGA+AGG 0.598822 4_1:+67416877 Msa0566350:CDS
TCCATGCCGAGCCACTGCCA+TGG 0.602713 4_1:-67420720 None:intergenic
AGAGGCAAAGCAATCCATGT+TGG 0.607377 4_1:+67420494 Msa0566350:CDS
ACTTGAAGAGAAGGAAAGAG+TGG 0.609943 4_1:+67418314 Msa0566350:CDS
TTCAACTGATCAATCAACAA+AGG 0.612891 4_1:-67417379 None:intergenic
TCTTTATAATGCAGATTGAG+GGG 0.613990 4_1:+67418518 Msa0566350:CDS
AGAGACAGAGACGGTAGCGA+TGG 0.614364 4_1:-67416145 None:intergenic
TATGTGGAATGCTTCCATGA+AGG 0.614570 4_1:-67421032 None:intergenic
GGAGCGGCAAGGATTACGAT+CGG 0.614644 4_1:+67416898 Msa0566350:CDS
ATCAAACATAAATACACAAG+GGG 0.616202 4_1:-67420855 None:intergenic
GCTCAAGCAGGAACTTGAAG+AGG 0.618199 4_1:+67420476 Msa0566350:CDS
CTCAGCGACGTCGAGGACGA+CGG 0.618536 4_1:+67416587 Msa0566350:CDS
TTCGGTGCTCAGCGACGTCG+AGG 0.625351 4_1:+67416580 Msa0566350:CDS
TCACTGCTCATCTCCAGCAA+GGG 0.625998 4_1:+67419377 Msa0566350:CDS
TGAAAGGAGTAACTCAGCAG+AGG 0.626089 4_1:-67419467 None:intergenic
AGTTCATGGTTCATACTCAA+GGG 0.628939 4_1:+67419495 Msa0566350:CDS
GAAGGTGAATTTGATGTGAT+CGG 0.630779 4_1:-67416623 None:intergenic
ACGGAGACTTCATCCTGTGA+AGG 0.633111 4_1:-67416641 None:intergenic
TAAGGCTAGGGATCAAGCTA+GGG 0.634167 4_1:+67417114 Msa0566350:CDS
TGATGATGCTGTTAGGGAGA+AGG 0.635078 4_1:+67416820 Msa0566350:CDS
TAAGAGCGTGAGGAGGAAGA+GGG 0.639625 4_1:-67416093 None:intergenic
GTAACAGAAAAGTCCATACA+TGG 0.642245 4_1:+67421073 Msa0566350:three_prime_UTR
AGATTCCATCCCAGCCAAAG+AGG 0.642943 4_1:-67417527 None:intergenic
CAGCCGTTGAGGGTTTGGAG+AGG 0.644245 4_1:+67417233 Msa0566350:CDS
TTTCTTCTCAGATTCCAACA+TGG 0.645960 4_1:-67420508 None:intergenic
GGAAGCGCGATGAATTCGGC+CGG 0.645981 4_1:+67416792 Msa0566350:CDS
GAATCGGCGAAGGAGCGGCA+AGG 0.647315 4_1:+67416887 Msa0566350:CDS
TGAAGCGAAATAAGAGCGTG+AGG 0.649388 4_1:-67416103 None:intergenic
GAAGTGGAAGCGCTTTGCCG+CGG 0.652202 4_1:+67416993 Msa0566350:CDS
GGCAGAAAATGGGTTGAGGG+AGG 0.653218 4_1:+67417741 Msa0566350:CDS
AGCGAAATAAGAGCGTGAGG+AGG 0.653332 4_1:-67416100 None:intergenic
AAATCAAACATAAATACACA+AGG 0.659117 4_1:-67420857 None:intergenic
GTGAGCACAGGGGATTGATG+TGG 0.660306 4_1:-67416216 None:intergenic
ACTCGACCATAGAATGCACC+GGG 0.661588 4_1:+67418284 Msa0566350:CDS
TTCTAGACTAAGGGACAGAG+TGG 0.663047 4_1:+67420617 Msa0566350:CDS
AATCAAACATAAATACACAA+GGG 0.663567 4_1:-67420856 None:intergenic
GAGAACAGAGAAGACTTGAG+GGG 0.677822 4_1:+67420669 Msa0566350:CDS
GGGGCTAATGATGGACATTG+CGG 0.692078 4_1:+67418537 Msa0566350:CDS
CGACCATAGAATGCACCGGG+TGG 0.695799 4_1:+67418287 Msa0566350:CDS
AATCAAAGATGGAATCGTTG+AGG 0.695950 4_1:+67417356 Msa0566350:CDS
AGCTTCTAGAAGAAACTGCG+AGG 0.719282 4_1:+67416855 Msa0566350:CDS
CTAGGGAACAGATTGAACAG+AGG 0.728016 4_1:+67417131 Msa0566350:CDS
ACTTTGTTGGAATTCAGCAG+CGG 0.730616 4_1:+67420742 Msa0566350:CDS
TATTGTGGGCGTGAGCACAG+GGG 0.761531 4_1:-67416226 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCTCTAAATTTTAATTA+AGG - chr4_1:67416361-67416380 None:intergenic 10.0%
!! TTTAATTCGAAAAGTAATAA+AGG - chr4_1:67416335-67416354 None:intergenic 15.0%
!!! AAATGCACAATTTTATTTAT+TGG + chr4_1:67418797-67418816 Msa0566350:intron 15.0%
!!! AATTTTATTTATTGGCAATT+TGG + chr4_1:67418805-67418824 Msa0566350:intron 15.0%
!!! TGGTTCATTTAATTTTTTTA+TGG - chr4_1:67419877-67419896 None:intergenic 15.0%
!!! TACATTTTTTCCATTATTTT+TGG + chr4_1:67420259-67420278 Msa0566350:intron 15.0%
!!! TAATAATTTGGAATCAAAGA+TGG + chr4_1:67417345-67417364 Msa0566350:CDS 20.0%
!! TTCAAATTTAGTAAGATTCT+TGG + chr4_1:67417775-67417794 Msa0566350:CDS 20.0%
!! AAATGACAAGTCAAAAAAAA+CGG + chr4_1:67417819-67417838 Msa0566350:CDS 20.0%
!!! TTTGTTTTTATTTCTCTTTC+TGG + chr4_1:67417882-67417901 Msa0566350:intron 20.0%
!! CAGTGTATATTCTAAATTAA+CGG - chr4_1:67418883-67418902 None:intergenic 20.0%
!! ATTTACAGAAGAAATAATTC+TGG - chr4_1:67419005-67419024 None:intergenic 20.0%
!! AAATAAATATAATTTCGGTG+TGG - chr4_1:67419097-67419116 None:intergenic 20.0%
!! ACACCGAAATTATATTTATT+TGG + chr4_1:67419096-67419115 Msa0566350:intron 20.0%
!! GCTCCAAATAAATATAATTT+CGG - chr4_1:67419102-67419121 None:intergenic 20.0%
!!! AATTTATAGTTTTTAAGCCA+AGG - chr4_1:67419188-67419207 None:intergenic 20.0%
!! TAGTTTCTTTATACAATTAC+TGG + chr4_1:67419775-67419794 Msa0566350:intron 20.0%
!!! ATTTTTCAAGTGTCATATTA+AGG + chr4_1:67419837-67419856 Msa0566350:intron 20.0%
!! AAAATTTCCAATTATAAGAG+AGG - chr4_1:67420816-67420835 None:intergenic 20.0%
!! AATCAAACATAAATACACAA+GGG - chr4_1:67420859-67420878 None:intergenic 20.0%
!! AAATCAAACATAAATACACA+AGG - chr4_1:67420860-67420879 None:intergenic 20.0%
!!! GAAACTTCTTTTAGAAGAAA+CGG - chr4_1:67416187-67416206 None:intergenic 25.0%
!! AATGTGATTTAAGGTTAGTT+TGG - chr4_1:67416264-67416283 None:intergenic 25.0%
! GTATAGAGAAATGTGATTTA+AGG - chr4_1:67416273-67416292 None:intergenic 25.0%
! AATTTCTTAATTCAGAAGAC+TGG + chr4_1:67416379-67416398 Msa0566350:five_prime_UTR 25.0%
! ATTGAATGTAATTGTGGTTT+AGG - chr4_1:67416461-67416480 None:intergenic 25.0%
! AATCGAATTGAATGTAATTG+TGG - chr4_1:67416467-67416486 None:intergenic 25.0%
! TCATATTTATCCCAATTCTT+AGG + chr4_1:67416497-67416516 Msa0566350:five_prime_UTR 25.0%
! CATATTTATCCCAATTCTTA+GGG + chr4_1:67416498-67416517 Msa0566350:five_prime_UTR 25.0%
! TATGATAAACCCTAAGAATT+GGG - chr4_1:67416510-67416529 None:intergenic 25.0%
! ATATGATAAACCCTAAGAAT+TGG - chr4_1:67416511-67416530 None:intergenic 25.0%
! ATGCTATTCAATTAAATGTC+CGG + chr4_1:67416536-67416555 Msa0566350:exon 25.0%
!!! GAAGGAGTTTGTTAATAATT+TGG + chr4_1:67417333-67417352 Msa0566350:CDS 25.0%
! TCTTATAAACACTACAAATC+TGG - chr4_1:67417426-67417445 None:intergenic 25.0%
!! GATTGTTGTTCAAAAAGTTA+GGG + chr4_1:67417567-67417586 Msa0566350:CDS 25.0%
! AAAAACAACTCATTTGAAGA+CGG - chr4_1:67417718-67417737 None:intergenic 25.0%
!!! TTCAAATGAGTTGTTTTTAG+CGG + chr4_1:67417720-67417739 Msa0566350:CDS 25.0%
!!! TTTGCTATTTGTCTAACTTT+GGG + chr4_1:67418094-67418113 Msa0566350:intron 25.0%
! ATATTTGCTTAACTCCATTA+AGG + chr4_1:67418214-67418233 Msa0566350:intron 25.0%
! TATTTGCTTAACTCCATTAA+GGG + chr4_1:67418215-67418234 Msa0566350:intron 25.0%
!!! TTTTACAAGTTTGCTATGTT+TGG + chr4_1:67418682-67418701 Msa0566350:intron 25.0%
!! CGTTAATTTAGAATATACAC+TGG + chr4_1:67418881-67418900 Msa0566350:intron 25.0%
! GTAAGTACACAAATTATCAA+TGG - chr4_1:67419745-67419764 None:intergenic 25.0%
!! TTGATAATTTGTGTACTTAC+TGG + chr4_1:67419745-67419764 Msa0566350:intron 25.0%
! TGAACATATGAGTTTATGTT+TGG + chr4_1:67419953-67419972 Msa0566350:intron 25.0%
! GAACATATGAGTTTATGTTT+GGG + chr4_1:67419954-67419973 Msa0566350:intron 25.0%
!!! CTTAGAGTAATGTTTGTTAT+CGG + chr4_1:67420154-67420173 Msa0566350:intron 25.0%
!!! TTTTGGAGAATTTATTTGTG+TGG + chr4_1:67420228-67420247 Msa0566350:intron 25.0%
! TGCAACAAGTATTTATGATT+AGG - chr4_1:67420439-67420458 None:intergenic 25.0%
! ATCAAACATAAATACACAAG+GGG - chr4_1:67420858-67420877 None:intergenic 25.0%
!! TTCAATTTTATGTCACAGAA+TGG + chr4_1:67420881-67420900 Msa0566350:three_prime_UTR 25.0%
AAAAAAACAAGAGACAGAGA+CGG - chr4_1:67416157-67416176 None:intergenic 30.0%
!! AATCTCACGGAATTTTTCAA+CGG - chr4_1:67416663-67416682 None:intergenic 30.0%
!! AATTGAGAAGATTTCTGGTA+AGG + chr4_1:67416955-67416974 Msa0566350:CDS 30.0%
! GAATTATGAGATTGCTATTG+AGG + chr4_1:67417153-67417172 Msa0566350:CDS 30.0%
TATTAGTGATTTGAGAGATG+AGG + chr4_1:67417195-67417214 Msa0566350:CDS 30.0%
TTCAACTGATCAATCAACAA+AGG - chr4_1:67417382-67417401 None:intergenic 30.0%
!! TATAAGATCATTGATGATGC+TGG + chr4_1:67417439-67417458 Msa0566350:CDS 30.0%
! AATCTATACATGAGTTGACT+AGG + chr4_1:67417545-67417564 Msa0566350:CDS 30.0%
! GGATTGTTGTTCAAAAAGTT+AGG + chr4_1:67417566-67417585 Msa0566350:CDS 30.0%
TGTTCAAAAAGTTAGGGATT+TGG + chr4_1:67417573-67417592 Msa0566350:CDS 30.0%
ATTTAGATGAGACTGTGAAT+AGG + chr4_1:67417623-67417642 Msa0566350:CDS 30.0%
! GAATAGGTTAGTTAAGGAAA+AGG + chr4_1:67417639-67417658 Msa0566350:CDS 30.0%
GTTAAGGAAAAGGATCAAAT+TGG + chr4_1:67417649-67417668 Msa0566350:CDS 30.0%
! ATCAAATTGGTTCTTTGCTT+AGG + chr4_1:67417662-67417681 Msa0566350:CDS 30.0%
TTTAGTAAGATTCTTGGAGA+TGG + chr4_1:67417781-67417800 Msa0566350:CDS 30.0%
AAAAACGGAAAAAGAAGAAG+AGG + chr4_1:67417834-67417853 Msa0566350:CDS 30.0%
AGAGGATGAAATATACACTT+TGG + chr4_1:67417852-67417871 Msa0566350:CDS 30.0%
!! GTTTGCTATTTGTCTAACTT+TGG + chr4_1:67418093-67418112 Msa0566350:intron 30.0%
TACTGAAGAACTTACATCTT+TGG + chr4_1:67418149-67418168 Msa0566350:intron 30.0%
ATATGATCCCTTAATTGTGA+AGG + chr4_1:67418378-67418397 Msa0566350:intron 30.0%
GACAAAACCTTCACAATTAA+GGG - chr4_1:67418388-67418407 None:intergenic 30.0%
! AGAATGTATGTTTTGTCATG+TGG + chr4_1:67418425-67418444 Msa0566350:intron 30.0%
TCTCTTTATAATGCAGATTG+AGG + chr4_1:67418516-67418535 Msa0566350:CDS 30.0%
CTCTTTATAATGCAGATTGA+GGG + chr4_1:67418517-67418536 Msa0566350:CDS 30.0%
TCTTTATAATGCAGATTGAG+GGG + chr4_1:67418518-67418537 Msa0566350:CDS 30.0%
CTGAAGAAGAAATTAACAGA+TGG + chr4_1:67418563-67418582 Msa0566350:CDS 30.0%
AATTTGTAAGTTGCAGTTGA+TGG + chr4_1:67418721-67418740 Msa0566350:intron 30.0%
TACACTGGAATATGTGTATA+TGG - chr4_1:67419045-67419064 None:intergenic 30.0%
! TGAAGTGGAAAAATTGCTTT+TGG + chr4_1:67419157-67419176 Msa0566350:intron 30.0%
!! GAAGTGGAAAAATTGCTTTT+GGG + chr4_1:67419158-67419177 Msa0566350:intron 30.0%
!! AAGTGGAAAAATTGCTTTTG+GGG + chr4_1:67419159-67419178 Msa0566350:intron 30.0%
AACCATCTAAAAAATCTGCA+GGG - chr4_1:67419254-67419273 None:intergenic 30.0%
AAACCATCTAAAAAATCTGC+AGG - chr4_1:67419255-67419274 None:intergenic 30.0%
!!! TTTTGAAATCTATTCCCTTC+TGG - chr4_1:67419301-67419320 None:intergenic 30.0%
ATTAGCAGCTTCAAAAGAAA+GGG - chr4_1:67419425-67419444 None:intergenic 30.0%
TTGGGATTAAGAAGAAACAA+AGG - chr4_1:67419557-67419576 None:intergenic 30.0%
! CAATGTTGATTGTAGATTCT+TGG + chr4_1:67419621-67419640 Msa0566350:intron 30.0%
CTGAATGAGTTATTCAAGTA+TGG + chr4_1:67419660-67419679 Msa0566350:CDS 30.0%
GACACTTGAAAAATGAAGTT+GGG - chr4_1:67419831-67419850 None:intergenic 30.0%
TGACACTTGAAAAATGAAGT+TGG - chr4_1:67419832-67419851 None:intergenic 30.0%
AAAAATTAGAAGCTTACGCT+TGG - chr4_1:67419897-67419916 None:intergenic 30.0%
CGATAACAAACATTACTCTA+AGG - chr4_1:67420156-67420175 None:intergenic 30.0%
AACTAATTAGGCTGTAAATC+TGG + chr4_1:67420324-67420343 Msa0566350:intron 30.0%
TCATAATATCCATTAACAGG+TGG - chr4_1:67420383-67420402 None:intergenic 30.0%
GAGTCATAATATCCATTAAC+AGG - chr4_1:67420386-67420405 None:intergenic 30.0%
TCATGTTAACTGACAATACA+AGG - chr4_1:67420411-67420430 None:intergenic 30.0%
ATACATATCTAGGCCTATTT+CGG - chr4_1:67420695-67420714 None:intergenic 30.0%
TTCCAATTATAAGAGAGGTT+CGG - chr4_1:67420811-67420830 None:intergenic 30.0%
AAGGAATGTACAGAATAATC+AGG - chr4_1:67421007-67421026 None:intergenic 30.0%
TAATGTAACGACAGTATATG+TGG - chr4_1:67421051-67421070 None:intergenic 30.0%
ATTGAAAACACAACCATGTA+TGG - chr4_1:67421089-67421108 None:intergenic 30.0%
! ATACATGGTTGTGTTTTCAA+TGG + chr4_1:67421088-67421107 Msa0566350:three_prime_UTR 30.0%
TCTTAATTCAGAAGACTGGT+TGG + chr4_1:67416383-67416402 Msa0566350:five_prime_UTR 35.0%
GAATTTGATGTGATCGGAAT+TGG - chr4_1:67416620-67416639 None:intergenic 35.0%
GAAGGTGAATTTGATGTGAT+CGG - chr4_1:67416626-67416645 None:intergenic 35.0%
GACTTCATTCAACCGATTAA+AGG + chr4_1:67416748-67416767 Msa0566350:CDS 35.0%
TGAGAAATCGAGTCATATGA+TGG + chr4_1:67416925-67416944 Msa0566350:CDS 35.0%
ACTGGAATTGAGAAGATTTC+TGG + chr4_1:67416950-67416969 Msa0566350:CDS 35.0%
!! AAGATTTCTGGTAAGGTGAA+TGG + chr4_1:67416962-67416981 Msa0566350:CDS 35.0%
ACAGAATGATGCAAGTGTTA+AGG + chr4_1:67417096-67417115 Msa0566350:CDS 35.0%
TAAGGATGAGAAGTTGAATG+AGG + chr4_1:67417267-67417286 Msa0566350:CDS 35.0%
! ATGAGGTTTCTGAGAGTTTA+AGG + chr4_1:67417284-67417303 Msa0566350:CDS 35.0%
AATCAAAGATGGAATCGTTG+AGG + chr4_1:67417356-67417375 Msa0566350:CDS 35.0%
!! CATTGATGATGCTGGTTATT+CGG + chr4_1:67417447-67417466 Msa0566350:CDS 35.0%
! AAAAGTTAGGGATTTGGTTG+AGG + chr4_1:67417579-67417598 Msa0566350:CDS 35.0%
TCACAGTCTCATCTAAATTC+TGG - chr4_1:67417621-67417640 None:intergenic 35.0%
! GACTGTGAATAGGTTAGTTA+AGG + chr4_1:67417633-67417652 Msa0566350:CDS 35.0%
!!! TTGTTTTTAGCGGCAGAAAA+TGG + chr4_1:67417730-67417749 Msa0566350:CDS 35.0%
!!! TGTTTTTAGCGGCAGAAAAT+GGG + chr4_1:67417731-67417750 Msa0566350:CDS 35.0%
!!! TTTCTGGTTTTCAACGAAAC+TGG + chr4_1:67417898-67417917 Msa0566350:intron 35.0%
GATACGTAAAGAACTCAACA+AGG - chr4_1:67417956-67417975 None:intergenic 35.0%
AGCACACTGTGAATGAATTA+AGG + chr4_1:67418041-67418060 Msa0566350:CDS 35.0%
CGACAAAACCTTCACAATTA+AGG - chr4_1:67418389-67418408 None:intergenic 35.0%
! TATGTTTTGTCATGTGGTCA+TGG + chr4_1:67418431-67418450 Msa0566350:CDS 35.0%
! ATGTTTTGTCATGTGGTCAT+GGG + chr4_1:67418432-67418451 Msa0566350:CDS 35.0%
GGTATGGAATGCTATTAGTT+AGG + chr4_1:67418648-67418667 Msa0566350:intron 35.0%
!! TACAAGTTTGCTATGTTTGG+AGG + chr4_1:67418685-67418704 Msa0566350:intron 35.0%
! TTTATTTGGAGCAGCAATAG+TGG + chr4_1:67419110-67419129 Msa0566350:intron 35.0%
TAGTGGTCTATCTAAATTGC+AGG + chr4_1:67419127-67419146 Msa0566350:intron 35.0%
ACCATCTAAAAAATCTGCAG+GGG - chr4_1:67419253-67419272 None:intergenic 35.0%
CATTAGCAGCTTCAAAAGAA+AGG - chr4_1:67419426-67419445 None:intergenic 35.0%
AGTTCATGGTTCATACTCAA+GGG + chr4_1:67419495-67419514 Msa0566350:CDS 35.0%
AAAGGATGAAGTTACGAAAG+TGG - chr4_1:67419539-67419558 None:intergenic 35.0%
! AAGAAGGTGTATCTCACATT+GGG - chr4_1:67419575-67419594 None:intergenic 35.0%
! AAAGAAGGTGTATCTCACAT+TGG - chr4_1:67419576-67419595 None:intergenic 35.0%
ATCTACAATCAACATTGACC+AGG - chr4_1:67419618-67419637 None:intergenic 35.0%
! TGTTGATTGTAGATTCTTGG+TGG + chr4_1:67419624-67419643 Msa0566350:intron 35.0%
GTTGATTGTAGATTCTTGGT+GGG + chr4_1:67419625-67419644 Msa0566350:intron 35.0%
TTGATTGTAGATTCTTGGTG+GGG + chr4_1:67419626-67419645 Msa0566350:intron 35.0%
CACAAATTATCAATGGCTCA+AGG - chr4_1:67419738-67419757 None:intergenic 35.0%
TGTAAATGAATTGAGCCAAG+CGG - chr4_1:67420021-67420040 None:intergenic 35.0%
! TGATGATATGCCTTTGACTT+TGG + chr4_1:67420200-67420219 Msa0566350:intron 35.0%
! GATGATATGCCTTTGACTTT+GGG + chr4_1:67420201-67420220 Msa0566350:intron 35.0%
CAAAAAATGCCCAAAGTCAA+AGG - chr4_1:67420213-67420232 None:intergenic 35.0%
!!! CTTTGACTTTGGGCATTTTT+TGG + chr4_1:67420211-67420230 Msa0566350:intron 35.0%
GGCAACTGTACCAAAAATAA+TGG - chr4_1:67420272-67420291 None:intergenic 35.0%
TACTTTAAGCCACCTGTTAA+TGG + chr4_1:67420371-67420390 Msa0566350:intron 35.0%
TTTCTTCTCAGATTCCAACA+TGG - chr4_1:67420511-67420530 None:intergenic 35.0%
TTCCGAACCTCTCTTATAAT+TGG + chr4_1:67420806-67420825 Msa0566350:exon 35.0%
GGCTTTACTACATTAAGAAC+AGG - chr4_1:67420923-67420942 None:intergenic 35.0%
TAATGTAGTAAAGCCAGTGT+TGG + chr4_1:67420928-67420947 Msa0566350:three_prime_UTR 35.0%
! ACATTCCTTTTATGCCTTCA+TGG + chr4_1:67421018-67421037 Msa0566350:three_prime_UTR 35.0%
GTAACAGAAAAGTCCATACA+TGG + chr4_1:67421073-67421092 Msa0566350:three_prime_UTR 35.0%
! ATGGAAGTCTTTTTGTCTAG+TGG + chr4_1:67421107-67421126 Msa0566350:three_prime_UTR 35.0%
CGATGGTGAAAGATCAAAGA+TGG - chr4_1:67416131-67416150 None:intergenic 40.0%
GGAGTGAAGATTGGTATTGT+GGG - chr4_1:67416243-67416262 None:intergenic 40.0%
TGGAGTGAAGATTGGTATTG+TGG - chr4_1:67416244-67416263 None:intergenic 40.0%
!! GGTTAGTTTGGAGTGAAGAT+TGG - chr4_1:67416252-67416271 None:intergenic 40.0%
! AATTCAGAAGACTGGTTGGT+TGG + chr4_1:67416387-67416406 Msa0566350:five_prime_UTR 40.0%
!! ATTGTGGTTTAGGTTGTCGA+TGG - chr4_1:67416451-67416470 None:intergenic 40.0%
TGATGTGATCGGAATTGGAT+CGG - chr4_1:67416615-67416634 None:intergenic 40.0%
CACATCAAATTCACCTTCAC+AGG + chr4_1:67416628-67416647 Msa0566350:CDS 40.0%
!! TTGCTTTTCCTGATCAAGCT+CGG - chr4_1:67416690-67416709 None:intergenic 40.0%
!!! TAACTCCGTTTTGGCTTTCT+CGG - chr4_1:67416726-67416745 None:intergenic 40.0%
! TGAAGTCTGTAACTCCGTTT+TGG - chr4_1:67416735-67416754 None:intergenic 40.0%
CTTGAGCAAGCACCTTTAAT+CGG - chr4_1:67416763-67416782 None:intergenic 40.0%
TCGAGTCATATGATGGTTAC+TGG + chr4_1:67416932-67416951 Msa0566350:CDS 40.0%
! TCTGGTAAGGTGAATGGTTT+TGG + chr4_1:67416968-67416987 Msa0566350:CDS 40.0%
ATGATGCAAGTGTTAAGGCT+AGG + chr4_1:67417101-67417120 Msa0566350:CDS 40.0%
TGATGCAAGTGTTAAGGCTA+GGG + chr4_1:67417102-67417121 Msa0566350:CDS 40.0%
! GGTTTCTGAGAGTTTAAGGA+AGG + chr4_1:67417288-67417307 Msa0566350:CDS 40.0%
TTTAAGGAAGGAAGAGAGTG+AGG + chr4_1:67417300-67417319 Msa0566350:CDS 40.0%
TTAAGGAAGGAAGAGAGTGA+GGG + chr4_1:67417301-67417320 Msa0566350:CDS 40.0%
!! TTAGGAGTGCTTTGTCAAAG+AGG + chr4_1:67417680-67417699 Msa0566350:CDS 40.0%
CAACTCATTTGAAGACGGAT+TGG - chr4_1:67417713-67417732 None:intergenic 40.0%
!! TGCTTTGGAGGATGTTGTTA+AGG + chr4_1:67417991-67418010 Msa0566350:CDS 40.0%
AAACTCAACTCTGCCCTTAA+TGG - chr4_1:67418231-67418250 None:intergenic 40.0%
CATTCTATGGTCGAGTTCTT+TGG - chr4_1:67418280-67418299 None:intergenic 40.0%
ACTTGAAGAGAAGGAAAGAG+TGG + chr4_1:67418314-67418333 Msa0566350:CDS 40.0%
!! AGGTGTTGAACAGCAATTTG+TGG + chr4_1:67418621-67418640 Msa0566350:CDS 40.0%
CATCATTGCACAACTAAAGC+TGG - chr4_1:67418839-67418858 None:intergenic 40.0%
TGATCGCAGTGACATAAACA+TGG - chr4_1:67418919-67418938 None:intergenic 40.0%
TAGAGCTAAAGGGAAAAGGT+AGG - chr4_1:67418975-67418994 None:intergenic 40.0%
!!! ACCTTTTCCCTTTAGCTCTA+TGG + chr4_1:67418975-67418994 Msa0566350:intron 40.0%
ACCATAGAGCTAAAGGGAAA+AGG - chr4_1:67418979-67418998 None:intergenic 40.0%
TGGAAGACCATAGAGCTAAA+GGG - chr4_1:67418985-67419004 None:intergenic 40.0%
TGGTCTATCTAAATTGCAGG+CGG + chr4_1:67419130-67419149 Msa0566350:intron 40.0%
TGCAGGGGCTGAAATAAAAA+GGG - chr4_1:67419238-67419257 None:intergenic 40.0%
AAATCTATTCCCTTCTGGTG+GGG - chr4_1:67419296-67419315 None:intergenic 40.0%
GAAATCTATTCCCTTCTGGT+GGG - chr4_1:67419297-67419316 None:intergenic 40.0%
TGAAATCTATTCCCTTCTGG+TGG - chr4_1:67419298-67419317 None:intergenic 40.0%
AAAATGTGTTCATCCCTTGC+TGG - chr4_1:67419393-67419412 None:intergenic 40.0%
TTCAAAAGAAAGGGCTTTGC+AGG - chr4_1:67419416-67419435 None:intergenic 40.0%
! GAAGCTGCTAATGCATTTTC+AGG + chr4_1:67419433-67419452 Msa0566350:CDS 40.0%
AACCATGAACTGAGTCTGAA+AGG - chr4_1:67419486-67419505 None:intergenic 40.0%
CAGTTCATGGTTCATACTCA+AGG + chr4_1:67419494-67419513 Msa0566350:CDS 40.0%
AAGTGGCAGCAAAGGAAAAA+GGG - chr4_1:67419522-67419541 None:intergenic 40.0%
AAAGTGGCAGCAAAGGAAAA+AGG - chr4_1:67419523-67419542 None:intergenic 40.0%
AAGAACGGAGAATGGAAAGA+AGG - chr4_1:67419591-67419610 None:intergenic 40.0%
TGATTGTAGATTCTTGGTGG+GGG + chr4_1:67419627-67419646 Msa0566350:intron 40.0%
! GAGTGCTCTAAGTTTAGACT+TGG - chr4_1:67419999-67420018 None:intergenic 40.0%
CTTACTCACGACAAACTCAA+TGG + chr4_1:67420082-67420101 Msa0566350:intron 40.0%
! TCAATGGATCTTTTCAGCCT+TGG + chr4_1:67420098-67420117 Msa0566350:intron 40.0%
AATAACCGTGAGAAACACCA+AGG - chr4_1:67420118-67420137 None:intergenic 40.0%
TGCTTGGGGATGAACTAATT+AGG + chr4_1:67420312-67420331 Msa0566350:intron 40.0%
AGGCTGTAAATCTGGTAGAT+TGG + chr4_1:67420332-67420351 Msa0566350:intron 40.0%
ACTTGAGGTCTTCTAGACTA+AGG + chr4_1:67420607-67420626 Msa0566350:CDS 40.0%
CTTGAGGTCTTCTAGACTAA+GGG + chr4_1:67420608-67420627 Msa0566350:CDS 40.0%
TTGAGAACAGAGAAGACTTG+AGG + chr4_1:67420667-67420686 Msa0566350:CDS 40.0%
TGAGAACAGAGAAGACTTGA+GGG + chr4_1:67420668-67420687 Msa0566350:CDS 40.0%
ATAGGCCTAGATATGTATGC+TGG + chr4_1:67420697-67420716 Msa0566350:CDS 40.0%
ACTTTGTTGGAATTCAGCAG+CGG + chr4_1:67420742-67420761 Msa0566350:CDS 40.0%
! TGCTTCCATGAAGGCATAAA+AGG - chr4_1:67421026-67421045 None:intergenic 40.0%
TATGTGGAATGCTTCCATGA+AGG - chr4_1:67421035-67421054 None:intergenic 40.0%
TGCAATTTCCCAGTTTGAAC+AGG + chr4_1:67421140-67421159 Msa0566350:three_prime_UTR 40.0%
GCAATTTCCCAGTTTGAACA+GGG + chr4_1:67421141-67421160 Msa0566350:three_prime_UTR 40.0%
! TGAAGCGAAATAAGAGCGTG+AGG - chr4_1:67416106-67416125 None:intergenic 45.0%
TTCAATTAAATGTCCGGCGC+CGG + chr4_1:67416542-67416561 Msa0566350:exon 45.0%
TGCTTGCTCAAGAAGCCATA+CGG + chr4_1:67416771-67416790 Msa0566350:CDS 45.0%
! ATACGGAAGCGCGATGAATT+CGG + chr4_1:67416788-67416807 Msa0566350:CDS 45.0%
TAACAGCATCATCACGCAAC+CGG - chr4_1:67416814-67416833 None:intergenic 45.0%
! GTTGCGTGATGATGCTGTTA+GGG + chr4_1:67416814-67416833 Msa0566350:CDS 45.0%
! TGATGATGCTGTTAGGGAGA+AGG + chr4_1:67416820-67416839 Msa0566350:CDS 45.0%
! AGCTTCTAGAAGAAACTGCG+AGG + chr4_1:67416855-67416874 Msa0566350:CDS 45.0%
AGAAACTGCGAGGCAATTAG+AGG + chr4_1:67416865-67416884 Msa0566350:CDS 45.0%
TGCGAGGCAATTAGAGGAAT+CGG + chr4_1:67416871-67416890 Msa0566350:CDS 45.0%
!!! GGTAAGGTGAATGGTTTTGG+TGG + chr4_1:67416971-67416990 Msa0566350:CDS 45.0%
!!! GTGAATGGTTTTGGTGGAAG+TGG + chr4_1:67416977-67416996 Msa0566350:CDS 45.0%
GTCGCAGAAATATACCGGTA+TGG + chr4_1:67417015-67417034 Msa0566350:CDS 45.0%
GAAATATACCGGTATGGCTG+CGG + chr4_1:67417021-67417040 Msa0566350:CDS 45.0%
TTAAGGCTAGGGATCAAGCT+AGG + chr4_1:67417113-67417132 Msa0566350:CDS 45.0%
TAAGGCTAGGGATCAAGCTA+GGG + chr4_1:67417114-67417133 Msa0566350:CDS 45.0%
CTAGGGAACAGATTGAACAG+AGG + chr4_1:67417131-67417150 Msa0566350:CDS 45.0%
TGCTATTGAGGTTTCGCAGT+TGG + chr4_1:67417165-67417184 Msa0566350:CDS 45.0%
AAGAAAACTGCAGCCGTTGA+GGG + chr4_1:67417223-67417242 Msa0566350:CDS 45.0%
! GGAGAGGGATTTGGTTGTTA+AGG + chr4_1:67417249-67417268 Msa0566350:CDS 45.0%
GCTTTCTGAGTCGTTGTTTG+TGG + chr4_1:67417471-67417490 Msa0566350:CDS 45.0%
GTTGTTTGTGGCGCAAGAAA+CGG + chr4_1:67417483-67417502 Msa0566350:CDS 45.0%
GAGTGCTTTGTCAAAGAGGA+TGG + chr4_1:67417684-67417703 Msa0566350:CDS 45.0%
TCTTTACGTATCCACTGTGC+AGG + chr4_1:67417964-67417983 Msa0566350:intron 45.0%
AACTCGACCATAGAATGCAC+CGG + chr4_1:67418283-67418302 Msa0566350:CDS 45.0%
! GGTAATTTGCGACAGGCATT+TGG + chr4_1:67418460-67418479 Msa0566350:CDS 45.0%
TGAACAGCAATTTGTGGCAC+AGG + chr4_1:67418627-67418646 Msa0566350:CDS 45.0%
AGCAATTTGTGGCACAGGTA+TGG + chr4_1:67418632-67418651 Msa0566350:intron 45.0%
CTGGAAGACCATAGAGCTAA+AGG - chr4_1:67418986-67419005 None:intergenic 45.0%
AGGGGCTGAAATAAAAAGGG+GGG - chr4_1:67419235-67419254 None:intergenic 45.0%
CAGGGGCTGAAATAAAAAGG+GGG - chr4_1:67419236-67419255 None:intergenic 45.0%
GCAGGGGCTGAAATAAAAAG+GGG - chr4_1:67419237-67419256 None:intergenic 45.0%
CTGCAGGGGCTGAAATAAAA+AGG - chr4_1:67419239-67419258 None:intergenic 45.0%
!!! GCCCCTGCAGATTTTTTAGA+TGG + chr4_1:67419249-67419268 Msa0566350:intron 45.0%
AATCTATTCCCTTCTGGTGG+GGG - chr4_1:67419295-67419314 None:intergenic 45.0%
AGTTCGATGTGTGTCATGCT+AGG + chr4_1:67419336-67419355 Msa0566350:intron 45.0%
TGAAAGGAGTAACTCAGCAG+AGG - chr4_1:67419470-67419489 None:intergenic 45.0%
CTCCTTTCAGACTCAGTTCA+TGG + chr4_1:67419481-67419500 Msa0566350:CDS 45.0%
AGTGGCAGCAAAGGAAAAAG+GGG - chr4_1:67419521-67419540 None:intergenic 45.0%
AGTTACGAAAGTGGCAGCAA+AGG - chr4_1:67419530-67419549 None:intergenic 45.0%
CATTGACCAGGAGAGAAGAA+CGG - chr4_1:67419606-67419625 None:intergenic 45.0%
TCCAAGCTAAAGCTCAAGCA+TGG + chr4_1:67419688-67419707 Msa0566350:CDS 45.0%
! ACCATGCTTGAGCTTTAGCT+TGG - chr4_1:67419692-67419711 None:intergenic 45.0%
! TAAACTTAGAGCACTCCGCT+TGG + chr4_1:67420003-67420022 Msa0566350:intron 45.0%
TCGTGAGTAAGAAGATGCCA+TGG - chr4_1:67420073-67420092 None:intergenic 45.0%
!! TTCAGCCTTGGTGTTTCTCA+CGG + chr4_1:67420110-67420129 Msa0566350:intron 45.0%
TTGGTACAGTTGCCATTCGT+TGG + chr4_1:67420278-67420297 Msa0566350:intron 45.0%
AGAGGCAAAGCAATCCATGT+TGG + chr4_1:67420494-67420513 Msa0566350:CDS 45.0%
AGATTTCTCTGCTGCATCTC+TGG - chr4_1:67420574-67420593 None:intergenic 45.0%
CTCTCAAGTTAGCAGACTTG+AGG + chr4_1:67420592-67420611 Msa0566350:CDS 45.0%
TTCTAGACTAAGGGACAGAG+TGG + chr4_1:67420617-67420636 Msa0566350:CDS 45.0%
GAGAACAGAGAAGACTTGAG+GGG + chr4_1:67420669-67420688 Msa0566350:CDS 45.0%
CATGGCCAGCATACATATCT+AGG - chr4_1:67420705-67420724 None:intergenic 45.0%
CTAGATATGTATGCTGGCCA+TGG + chr4_1:67420703-67420722 Msa0566350:CDS 45.0%
GACTGATACGCAACAGCAAA+CGG + chr4_1:67420764-67420783 Msa0566350:CDS 45.0%
GCAAACGGCTTCTAACGAAA+TGG + chr4_1:67420779-67420798 Msa0566350:CDS 45.0%
TGACAATGATCGACCAACAC+TGG - chr4_1:67420944-67420963 None:intergenic 45.0%
TGTCATGTTGCAGCAGCATT+TGG + chr4_1:67420959-67420978 Msa0566350:three_prime_UTR 45.0%
TTTCCCAGTTTGAACAGGGT+CGG + chr4_1:67421145-67421164 Msa0566350:three_prime_UTR 45.0%
TTTCCGACCCTGTTCAAACT+GGG - chr4_1:67421151-67421170 None:intergenic 45.0%
ATTTCCGACCCTGTTCAAAC+TGG - chr4_1:67421152-67421171 None:intergenic 45.0%
! TAAGAGCGTGAGGAGGAAGA+GGG - chr4_1:67416096-67416115 None:intergenic 50.0%
! ATAAGAGCGTGAGGAGGAAG+AGG - chr4_1:67416097-67416116 None:intergenic 50.0%
! AGCGAAATAAGAGCGTGAGG+AGG - chr4_1:67416103-67416122 None:intergenic 50.0%
CAGGGGATTGATGTGGATGA+GGG - chr4_1:67416212-67416231 None:intergenic 50.0%
ACAGGGGATTGATGTGGATG+AGG - chr4_1:67416213-67416232 None:intergenic 50.0%
GGTACGTTGTTCTCACGTCA+CGG + chr4_1:67416408-67416427 Msa0566350:five_prime_UTR 50.0%
ACGGAGACTTCATCCTGTGA+AGG - chr4_1:67416644-67416663 None:intergenic 50.0%
GAATTCATCGCGCTTCCGTA+TGG - chr4_1:67416789-67416808 None:intergenic 50.0%
! GGTTGCGTGATGATGCTGTT+AGG + chr4_1:67416813-67416832 Msa0566350:CDS 50.0%
TGCTGTTAGGGAGAAGGAAG+AGG + chr4_1:67416826-67416845 Msa0566350:CDS 50.0%
GCAATTAGAGGAATCGGCGA+AGG + chr4_1:67416877-67416896 Msa0566350:CDS 50.0%
ATAAGTCACCGCAGCCATAC+CGG - chr4_1:67417032-67417051 None:intergenic 50.0%
GAAGAAAACTGCAGCCGTTG+AGG + chr4_1:67417222-67417241 Msa0566350:CDS 50.0%
ATCCCTCTCCAAACCCTCAA+CGG - chr4_1:67417239-67417258 None:intergenic 50.0%
TGAGGGTTTGGAGAGGGATT+TGG + chr4_1:67417240-67417259 Msa0566350:CDS 50.0%
GAGTGAGGGTTTGCAGTTGA+AGG + chr4_1:67417315-67417334 Msa0566350:CDS 50.0%
TGAGAATGTACGCGCCTCTT+TGG + chr4_1:67417513-67417532 Msa0566350:CDS 50.0%
AGATTCCATCCCAGCCAAAG+AGG - chr4_1:67417530-67417549 None:intergenic 50.0%
!! TAGCGGCAGAAAATGGGTTG+AGG + chr4_1:67417737-67417756 Msa0566350:CDS 50.0%
!! AGCGGCAGAAAATGGGTTGA+GGG + chr4_1:67417738-67417757 Msa0566350:CDS 50.0%
!! GAAAATGGGTTGAGGGAGGT+TGG + chr4_1:67417745-67417764 Msa0566350:CDS 50.0%
TAAGCAGCACATAGAAGCCC+AGG + chr4_1:67418254-67418273 Msa0566350:CDS 50.0%
ATGGTCGAGTTCTTTGGCCT+GGG - chr4_1:67418274-67418293 None:intergenic 50.0%
TATGGTCGAGTTCTTTGGCC+TGG - chr4_1:67418275-67418294 None:intergenic 50.0%
ACTCGACCATAGAATGCACC+GGG + chr4_1:67418284-67418303 Msa0566350:CDS 50.0%
! TCTCTTCAAGTTCCTCCACC+CGG - chr4_1:67418305-67418324 None:intergenic 50.0%
GGTGGAGGAACTTGAAGAGA+AGG + chr4_1:67418305-67418324 Msa0566350:CDS 50.0%
GCAGATTGAGGGGCTAATGA+TGG + chr4_1:67418528-67418547 Msa0566350:CDS 50.0%
!! GGGGCTAATGATGGACATTG+CGG + chr4_1:67418537-67418556 Msa0566350:CDS 50.0%
TGCAGGACACAACACTACAC+TGG - chr4_1:67419060-67419079 None:intergenic 50.0%
ATTGCAGGCGGATAGTGAAG+TGG + chr4_1:67419142-67419161 Msa0566350:intron 50.0%
!!! AATTGCTTTTGGGGCTGCCT+TGG + chr4_1:67419168-67419187 Msa0566350:intron 50.0%
TGAAATAAAAAGGGGGGGGG+GGG - chr4_1:67419229-67419248 None:intergenic 50.0%
CTGAAATAAAAAGGGGGGGG+GGG - chr4_1:67419230-67419249 None:intergenic 50.0%
GCTGAAATAAAAAGGGGGGG+GGG - chr4_1:67419231-67419250 None:intergenic 50.0%
GGCTGAAATAAAAAGGGGGG+GGG - chr4_1:67419232-67419251 None:intergenic 50.0%
GGGCTGAAATAAAAAGGGGG+GGG - chr4_1:67419233-67419252 None:intergenic 50.0%
GGGGCTGAAATAAAAAGGGG+GGG - chr4_1:67419234-67419253 None:intergenic 50.0%
! TCATGTTTTCCCCCACCAGA+AGG + chr4_1:67419283-67419302 Msa0566350:intron 50.0%
! CATGTTTTCCCCCACCAGAA+GGG + chr4_1:67419284-67419303 Msa0566350:intron 50.0%
GCTGGAGATGAGCAGTGAAA+GGG - chr4_1:67419375-67419394 None:intergenic 50.0%
TGCTGGAGATGAGCAGTGAA+AGG - chr4_1:67419376-67419395 None:intergenic 50.0%
TTCACTGCTCATCTCCAGCA+AGG + chr4_1:67419376-67419395 Msa0566350:CDS 50.0%
TCACTGCTCATCTCCAGCAA+GGG + chr4_1:67419377-67419396 Msa0566350:CDS 50.0%
CAGGAGAGAAGAACGGAGAA+TGG - chr4_1:67419599-67419618 None:intergenic 50.0%
CATTCTCCGTTCTTCTCTCC+TGG + chr4_1:67419597-67419616 Msa0566350:intron 50.0%
GCTCATCTTTGATGCAGCCA+TGG + chr4_1:67420053-67420072 Msa0566350:intron 50.0%
GCTCAAGCAGGAACTTGAAG+AGG + chr4_1:67420476-67420495 Msa0566350:CDS 50.0%
AAGACTTGAGGGGCCGAAAT+AGG + chr4_1:67420679-67420698 Msa0566350:CDS 50.0%
AGAGACAGAGACGGTAGCGA+TGG - chr4_1:67416148-67416167 None:intergenic 55.0%
GGGATTGATGTGGATGAGGG+AGG - chr4_1:67416209-67416228 None:intergenic 55.0%
GTGAGCACAGGGGATTGATG+TGG - chr4_1:67416219-67416238 None:intergenic 55.0%
TATTGTGGGCGTGAGCACAG+GGG - chr4_1:67416229-67416248 None:intergenic 55.0%
GTATTGTGGGCGTGAGCACA+GGG - chr4_1:67416230-67416249 None:intergenic 55.0%
CGAATCGGCATCTAAGTCGC+CGG - chr4_1:67416564-67416583 None:intergenic 55.0%
! CGGCGACTTAGATGCCGATT+CGG + chr4_1:67416562-67416581 Msa0566350:CDS 55.0%
CAAGCTCGGCGAGAATCTCA+CGG - chr4_1:67416676-67416695 None:intergenic 55.0%
GATTCTCGCCGAGCTTGATC+AGG + chr4_1:67416679-67416698 Msa0566350:CDS 55.0%
!!! CTCCGTTTTGGCTTTCTCGG+CGG - chr4_1:67416723-67416742 None:intergenic 55.0%
TAGAGGAATCGGCGAAGGAG+CGG + chr4_1:67416882-67416901 Msa0566350:CDS 55.0%
GGAGCGGCAAGGATTACGAT+CGG + chr4_1:67416898-67416917 Msa0566350:CDS 55.0%
! CCGGTATATTTCTGCGACCG+CGG - chr4_1:67417013-67417032 None:intergenic 55.0%
CCGCGGTCGCAGAAATATAC+CGG + chr4_1:67417010-67417029 Msa0566350:CDS 55.0%
GGTATGGCTGCGGTGACTTA+TGG + chr4_1:67417031-67417050 Msa0566350:CDS 55.0%
AACTGCAGCCGTTGAGGGTT+TGG + chr4_1:67417228-67417247 Msa0566350:CDS 55.0%
AGCCGTTGAGGGTTTGGAGA+GGG + chr4_1:67417234-67417253 Msa0566350:CDS 55.0%
AATGTACGCGCCTCTTTGGC+TGG + chr4_1:67417517-67417536 Msa0566350:CDS 55.0%
ATGTACGCGCCTCTTTGGCT+GGG + chr4_1:67417518-67417537 Msa0566350:CDS 55.0%
!! GGCAGAAAATGGGTTGAGGG+AGG + chr4_1:67417741-67417760 Msa0566350:CDS 55.0%
TACGTATCCACTGTGCAGGC+TGG + chr4_1:67417968-67417987 Msa0566350:intron 55.0%
! TGTCATGTGGTCATGGGCTG+TGG + chr4_1:67418438-67418457 Msa0566350:CDS 55.0%
! GTCATGTGGTCATGGGCTGT+GGG + chr4_1:67418439-67418458 Msa0566350:CDS 55.0%
! GGCTGTGGGTAATTTGCGAC+AGG + chr4_1:67418453-67418472 Msa0566350:CDS 55.0%
GTAGTGTTGTGTCCTGCAGC+TGG + chr4_1:67419062-67419081 Msa0566350:intron 55.0%
AAATAAAAAGGGGGGGGGGG+GGG - chr4_1:67419227-67419246 None:intergenic 55.0%
GAAATAAAAAGGGGGGGGGG+GGG - chr4_1:67419228-67419247 None:intergenic 55.0%
GCAGTTGTCAACGCTCAAGC+AGG + chr4_1:67420464-67420483 Msa0566350:intron 55.0%
ATGTATGCTGGCCATGGCAG+TGG + chr4_1:67420709-67420728 Msa0566350:CDS 55.0%
! TGGCTCGGCATGGACTTTGT+TGG + chr4_1:67420729-67420748 Msa0566350:CDS 55.0%
GGTATTGTGGGCGTGAGCAC+AGG - chr4_1:67416231-67416250 None:intergenic 60.0%
!! GACGTCGCTGAGCACCGAAT+CGG - chr4_1:67416579-67416598 None:intergenic 60.0%
CGCCGCCGAGAAAGCCAAAA+CGG + chr4_1:67416718-67416737 Msa0566350:CDS 60.0%
! GGAAGCGCGATGAATTCGGC+CGG + chr4_1:67416792-67416811 Msa0566350:CDS 60.0%
!! GAAGTGGAAGCGCTTTGCCG+CGG + chr4_1:67416993-67417012 Msa0566350:CDS 60.0%
CAGCCGTTGAGGGTTTGGAG+AGG + chr4_1:67417233-67417252 Msa0566350:CDS 60.0%
! CAAAGCACCAGCCTGCACAG+TGG - chr4_1:67417978-67417997 None:intergenic 60.0%
CACTGTGCAGGCTGGTGCTT+TGG + chr4_1:67417976-67417995 Msa0566350:intron 60.0%
TGTGCAGGCTGGTGCTTTGG+AGG + chr4_1:67417979-67417998 Msa0566350:intron 60.0%
CGACCATAGAATGCACCGGG+TGG + chr4_1:67418287-67418306 Msa0566350:CDS 60.0%
CCTCCACCCGGTGCATTCTA+TGG - chr4_1:67418293-67418312 None:intergenic 60.0%
CCATAGAATGCACCGGGTGG+AGG + chr4_1:67418290-67418309 Msa0566350:CDS 60.0%
GCAGAGCAAGAAGCTGCTGC+AGG + chr4_1:67418595-67418614 Msa0566350:CDS 60.0%
CAAGAAGCTGCTGCAGGCAC+AGG + chr4_1:67418601-67418620 Msa0566350:CDS 60.0%
AATAAAAAGGGGGGGGGGGG+GGG - chr4_1:67419226-67419245 None:intergenic 60.0%
GTTCATCCCCAAGCAGCGCA+GGG - chr4_1:67420307-67420326 None:intergenic 60.0%
AGTTCATCCCCAAGCAGCGC+AGG - chr4_1:67420308-67420327 None:intergenic 60.0%
!! TTCGGTGCTCAGCGACGTCG+AGG + chr4_1:67416580-67416599 Msa0566350:CDS 65.0%
CTCAGCGACGTCGAGGACGA+CGG + chr4_1:67416587-67416606 Msa0566350:CDS 65.0%
GAATCGGCGAAGGAGCGGCA+AGG + chr4_1:67416887-67416906 Msa0566350:CDS 65.0%
ACGCGCCTCTTTGGCTGGGA+TGG + chr4_1:67417522-67417541 Msa0566350:CDS 65.0%
ATAAAAAGGGGGGGGGGGGG+GGG - chr4_1:67419225-67419244 None:intergenic 65.0%
AGCGCAGGGCAGCCAACGAA+TGG - chr4_1:67420293-67420312 None:intergenic 65.0%
TTGGCTGCCCTGCGCTGCTT+GGG + chr4_1:67420297-67420316 Msa0566350:intron 65.0%
TGCTGGCCATGGCAGTGGCT+CGG + chr4_1:67420714-67420733 Msa0566350:CDS 65.0%
TCCATGCCGAGCCACTGCCA+TGG - chr4_1:67420723-67420742 None:intergenic 65.0%
GGCATCTAAGTCGCCGGCGC+CGG - chr4_1:67416558-67416577 None:intergenic 70.0%
GTGTCCTGCAGCTGGAGCGC+TGG + chr4_1:67419070-67419089 Msa0566350:intron 70.0%
TGGTCCAGCGCTCCAGCTGC+AGG - chr4_1:67419077-67419096 None:intergenic 70.0%
GTTGGCTGCCCTGCGCTGCT+TGG + chr4_1:67420296-67420315 Msa0566350:intron 70.0%
TGGCTGCCCTGCGCTGCTTG+GGG + chr4_1:67420298-67420317 Msa0566350:intron 70.0%
! GCCATGGCAGTGGCTCGGCA+TGG + chr4_1:67420719-67420738 Msa0566350:CDS 70.0%
! GGGGGGGGGGGGGGGAATGA+GGG - chr4_1:67419217-67419236 None:intergenic 80.0%
! GGGGGGGGGGGGGGGGAATG+AGG - chr4_1:67419218-67419237 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 67416063 67421203 67416063 ID=Msa0566350;Name=Msa0566350
chr4_1 mRNA 67416063 67421203 67416063 ID=Msa0566350-mRNA-1;Parent=Msa0566350;Name=Msa0566350-mRNA-1;_AED=0.07;_eAED=0.08;_QI=400|0.42|0.62|0.75|0.85|0.75|8|379|788
chr4_1 exon 67416063 67416275 67416063 ID=Msa0566350-mRNA-1:exon:22115;Parent=Msa0566350-mRNA-1
chr4_1 exon 67416364 67417873 67416364 ID=Msa0566350-mRNA-1:exon:22116;Parent=Msa0566350-mRNA-1
chr4_1 exon 67417986 67418062 67417986 ID=Msa0566350-mRNA-1:exon:22117;Parent=Msa0566350-mRNA-1
chr4_1 exon 67418236 67418347 67418236 ID=Msa0566350-mRNA-1:exon:22118;Parent=Msa0566350-mRNA-1
chr4_1 exon 67418427 67418648 67418427 ID=Msa0566350-mRNA-1:exon:22119;Parent=Msa0566350-mRNA-1
chr4_1 exon 67419358 67419543 67419358 ID=Msa0566350-mRNA-1:exon:22120;Parent=Msa0566350-mRNA-1
chr4_1 exon 67419636 67419725 67419636 ID=Msa0566350-mRNA-1:exon:22121;Parent=Msa0566350-mRNA-1
chr4_1 exon 67420468 67421203 67420468 ID=Msa0566350-mRNA-1:exon:22122;Parent=Msa0566350-mRNA-1
chr4_1 five_prime_UTR 67416063 67416275 67416063 ID=Msa0566350-mRNA-1:five_prime_utr;Parent=Msa0566350-mRNA-1
chr4_1 five_prime_UTR 67416364 67416550 67416364 ID=Msa0566350-mRNA-1:five_prime_utr;Parent=Msa0566350-mRNA-1
chr4_1 CDS 67416551 67417873 67416551 ID=Msa0566350-mRNA-1:cds;Parent=Msa0566350-mRNA-1
chr4_1 CDS 67417986 67418062 67417986 ID=Msa0566350-mRNA-1:cds;Parent=Msa0566350-mRNA-1
chr4_1 CDS 67418236 67418347 67418236 ID=Msa0566350-mRNA-1:cds;Parent=Msa0566350-mRNA-1
chr4_1 CDS 67418427 67418648 67418427 ID=Msa0566350-mRNA-1:cds;Parent=Msa0566350-mRNA-1
chr4_1 CDS 67419358 67419543 67419358 ID=Msa0566350-mRNA-1:cds;Parent=Msa0566350-mRNA-1
chr4_1 CDS 67419636 67419725 67419636 ID=Msa0566350-mRNA-1:cds;Parent=Msa0566350-mRNA-1
chr4_1 CDS 67420468 67420824 67420468 ID=Msa0566350-mRNA-1:cds;Parent=Msa0566350-mRNA-1
chr4_1 three_prime_UTR 67420825 67421203 67420825 ID=Msa0566350-mRNA-1:three_prime_utr;Parent=Msa0566350-mRNA-1
Gene Sequence

>Msa0566350

ATGTCCGGCGCCGGCGACTTAGATGCCGATTCGGTGCTCAGCGACGTCGAGGACGACGGCGCCGATCCAATTCCGATCACATCAAATTCACCTTCACAGGATGAAGTCTCCGTTGAAAAATTCCGTGAGATTCTCGCCGAGCTTGATCAGGAAAAGCAAGCACGCATCGCCGCCGAGAAAGCCAAAACGGAGTTACAGACTTCATTCAACCGATTAAAGGTGCTTGCTCAAGAAGCCATACGGAAGCGCGATGAATTCGGCCGGTTGCGTGATGATGCTGTTAGGGAGAAGGAAGAGGCTACGAAGCTTCTAGAAGAAACTGCGAGGCAATTAGAGGAATCGGCGAAGGAGCGGCAAGGATTACGATCGGAGATTGAGAAATCGAGTCATATGATGGTTACTGGAATTGAGAAGATTTCTGGTAAGGTGAATGGTTTTGGTGGAAGTGGAAGCGCTTTGCCGCGGTCGCAGAAATATACCGGTATGGCTGCGGTGACTTATGGTGTTATAAAGAGAGCGAATGAGATTGTTGAAGAGTTGTTGAAACAGAATGATGCAAGTGTTAAGGCTAGGGATCAAGCTAGGGAACAGATTGAACAGAGGAATTATGAGATTGCTATTGAGGTTTCGCAGTTGGAAGCAACTATTAGTGATTTGAGAGATGAGGTTGCGAAGAAAACTGCAGCCGTTGAGGGTTTGGAGAGGGATTTGGTTGTTAAGGATGAGAAGTTGAATGAGGTTTCTGAGAGTTTAAGGAAGGAAGAGAGTGAGGGTTTGCAGTTGAAGGAGTTTGTTAATAATTTGGAATCAAAGATGGAATCGTTGAGGCCTTTGTTGATTGATCAGTTGAATTTTGTGTCTAAGATTCACAACCAGATTTGTAGTGTTTATAAGATCATTGATGATGCTGGTTATTCGGAGCTTTCTGAGTCGTTGTTTGTGGCGCAAGAAACGGATATTGATGAGAATGTACGCGCCTCTTTGGCTGGGATGGAATCTATACATGAGTTGACTAGGATTGTTGTTCAAAAAGTTAGGGATTTGGTTGAGGAGAAGAATCGTGAGATCCAGAATTTAGATGAGACTGTGAATAGGTTAGTTAAGGAAAAGGATCAAATTGGTTCTTTGCTTAGGAGTGCTTTGTCAAAGAGGATGGCATCCAATCCGTCTTCAAATGAGTTGTTTTTAGCGGCAGAAAATGGGTTGAGGGAGGTTGGTATAGATTTCAAATTTAGTAAGATTCTTGGAGATGGAAAGCTTGCAGCTTCAAATGACAAGTCAAAAAAAACGGAAAAAGAAGAAGAGGATGAAATATACACTTTGGCTGGTGCTTTGGAGGATGTTGTTAAGGCATCTCAGCTTGAGATCATTGAGCTGCAGCACACTGTGAATGAATTAAGGGCAGAGTTGAGTTTACTTAAGCAGCACATAGAAGCCCAGGCCAAAGAACTCGACCATAGAATGCACCGGGTGGAGGAACTTGAAGAGAAGGAAAGAGTGGCAAATGAAAATAATGTATGTTTTGTCATGTGGTCATGGGCTGTGGGTAATTTGCGACAGGCATTTGGTGTCAATACTTTTCTATCTCTTAGAATCAATTGTCTCTTTATAATGCAGATTGAGGGGCTAATGATGGACATTGCGGCTGCTGAAGAAGAAATTAACAGATGGAAATTAGCAGCAGAGCAAGAAGCTGCTGCAGGCACAGGTGTTGAACAGCAATTTGTGGCACAGGTTGCTGTGCTTATCCCTTTCACTGCTCATCTCCAGCAAGGGATGAACACATTTTCCTGCAAAGCCCTTTCTTTTGAAGCTGCTAATGCATTTTCAGGCAGCATCTTAGCCTCTGCTGAGTTACTCCTTTCAGACTCAGTTCATGGTTCATACTCAAGGGCCCCTTTTTCCTTTGCTGCCACTTTCATTCTTGGTGGGGGTGTAAATGAGCTGAATGAGTTATTCAAGTATGGTTTCTTCCAAGCTAAAGCTCAAGCATGGTTTCTTCAAGCTCAATTGTCAACGCTCAAGCAGGAACTTGAAGAGGCAAAGCAATCCATGTTGGAATCTGAGAAGAAATTAAAATTCAAAGAAGAGACAGCAGCTGCTGCCATGGCAGCCAGAGATGCAGCAGAGAAATCTCTCAAGTTAGCAGACTTGAGGTCTTCTAGACTAAGGGACAGAGTGGAAGAGCTCACTCATCAGCTCGAAGAGTTTGAGAACAGAGAAGACTTGAGGGGCCGAAATAGGCCTAGATATGTATGCTGGCCATGGCAGTGGCTCGGCATGGACTTTGTTGGAATTCAGCAGCGGACTGATACGCAACAGCAAACGGCTTCTAACGAAATGGAGCTTTCCGAACCTCTCTTATAA
Protein sequence

>Msa0566350

MSGAGDLDADSVLSDVEDDGADPIPITSNSPSQDEVSVEKFREILAELDQEKQARIAAEKAKTELQTSFNRLKVLAQEAIRKRDEFGRLRDDAVREKEEATKLLEETARQLEESAKERQGLRSEIEKSSHMMVTGIEKISGKVNGFGGSGSALPRSQKYTGMAAVTYGVIKRANEIVEELLKQNDASVKARDQAREQIEQRNYEIAIEVSQLEATISDLRDEVAKKTAAVEGLERDLVVKDEKLNEVSESLRKEESEGLQLKEFVNNLESKMESLRPLLIDQLNFVSKIHNQICSVYKIIDDAGYSELSESLFVAQETDIDENVRASLAGMESIHELTRIVVQKVRDLVEEKNREIQNLDETVNRLVKEKDQIGSLLRSALSKRMASNPSSNELFLAAENGLREVGIDFKFSKILGDGKLAASNDKSKKTEKEEEDEIYTLAGALEDVVKASQLEIIELQHTVNELRAELSLLKQHIEAQAKELDHRMHRVEELEEKERVANENNVCFVMWSWAVGNLRQAFGVNTFLSLRINCLFIMQIEGLMMDIAAAEEEINRWKLAAEQEAAAGTGVEQQFVAQVAVLIPFTAHLQQGMNTFSCKALSFEAANAFSGSILASAELLLSDSVHGSYSRAPFSFAATFILGGGVNELNELFKYGFFQAKAQAWFLQAQLSTLKQELEEAKQSMLESEKKLKFKEETAAAAMAARDAAEKSLKLADLRSSRLRDRVEELTHQLEEFENREDLRGRNRPRYVCWPWQWLGMDFVGIQQRTDTQQQTASNEMELSEPLL*