AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0566750

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0566750 MtrunA17_Chr8g0381341 91.237 582 16 1 1 582 1 547 0.0 1033
Msa0566750 MtrunA17_Chr8g0381341 99.167 120 1 0 669 788 542 661 3.48e-73 251
Msa0566750 MtrunA17_Chr5g0419511 56.627 83 1 1 474 556 34 81 2.75e-17 77.4
Msa0566750 MtrunA17_Chr1g0203001 51.724 87 41 1 671 757 342 427 1.02e-15 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0566750 AT1G24560.1 51.661 602 231 9 4 582 2 566 6.28e-177 524
Msa0566750 AT1G24560.1 63.333 120 42 2 669 788 561 678 6.33e-33 136

Find 232 sgRNAs with CRISPR-Local

Find 384 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATATTTATCCCAATTCTT+AGG 0.135778 4_1:+67871741 Msa0566750:five_prime_UTR
TTCCGAACCTCTCTTATAAT+TGG 0.162753 4_1:+67876047 Msa0566750:exon
ATGAGGTTTCTGAGAGTTTA+AGG 0.165822 4_1:+67872528 Msa0566750:CDS
ACTGGAATTGAGAAGATTTC+TGG 0.197534 4_1:+67872194 Msa0566750:CDS
GAAGGAGTTTGTTAATAATT+TGG 0.197675 4_1:+67872577 Msa0566750:CDS
TTCAAATTTAGTAAGATTCT+TGG 0.227068 4_1:+67873019 Msa0566750:CDS
CATTCTATGGTCGAGTTCTT+TGG 0.227216 4_1:-67873521 None:intergenic
TCTGGTAAGGTGAATGGTTT+TGG 0.265573 4_1:+67872212 Msa0566750:CDS
GACTTCATTCAACCGATTAA+AGG 0.284071 4_1:+67871992 Msa0566750:CDS
CTGAATGAGTTATTCAAGTA+TGG 0.287155 4_1:+67874901 Msa0566750:CDS
AACTGCAGCCGTTGAGGGTT+TGG 0.288903 4_1:+67872472 Msa0566750:CDS
TGCTTCCATGAAGGCATAAA+AGG 0.290640 4_1:-67876264 None:intergenic
AATGTGATTTAAGGTTAGTT+TGG 0.295521 4_1:-67871505 None:intergenic
CCTCCACCCGGTGCATTCTA+TGG 0.302232 4_1:-67873534 None:intergenic
TGCAATTTCCCCATTTGAAC+AGG 0.304491 4_1:+67876381 Msa0566750:three_prime_UTR
GGAGAGGGATTTGGTTGTTA+AGG 0.312356 4_1:+67872493 Msa0566750:CDS
CACTGTGCAGGCTGGTGCTT+TGG 0.313975 4_1:+67873220 Msa0566750:intron
CAATGTTGATTGTAGATTCT+TGG 0.329932 4_1:+67874862 Msa0566750:intron
AAAGTGGCAGCAAAGGAAAA+AGG 0.331138 4_1:-67874761 None:intergenic
AGATTTCTCTGCTGCATCTC+TGG 0.331404 4_1:-67875812 None:intergenic
AAGACTTGAGGGGCCGAAAT+AGG 0.339224 4_1:+67875920 Msa0566750:CDS
GAGTGAGGGTTTGCAGTTGA+AGG 0.339449 4_1:+67872559 Msa0566750:CDS
ATATGATAAACCCTAAGAAT+TGG 0.340104 4_1:-67871752 None:intergenic
TGCTGCATCTCTGGCTGCCA+TGG 0.341080 4_1:-67875803 None:intergenic
ATTGAATGTAATTGTGGTTT+AGG 0.343298 4_1:-67871702 None:intergenic
GAATTTGATGTGATCGGAAT+TGG 0.344001 4_1:-67871861 None:intergenic
TGAAGTCTGTAACTCCGTTT+TGG 0.347141 4_1:-67871976 None:intergenic
AATGTACGCGCCTCTTTGGC+TGG 0.351712 4_1:+67872761 Msa0566750:CDS
GTTAAGGAAAAGGATCAAAT+TGG 0.357356 4_1:+67872893 Msa0566750:CDS
TGAGGGTTTGGAGAGGGATT+TGG 0.360266 4_1:+67872484 Msa0566750:CDS
TCGAGTCATATGATGGTTAC+TGG 0.361394 4_1:+67872176 Msa0566750:CDS
TGTCATGTTGCAGCAGCATT+TGG 0.363506 4_1:+67876200 Msa0566750:three_prime_UTR
CTTGAGCAAGCACCTTTAAT+CGG 0.365333 4_1:-67872004 None:intergenic
TCACAGTCTCATCTAAATTC+TGG 0.366217 4_1:-67872862 None:intergenic
GGTTGCGTGATGATGCTGTT+AGG 0.370427 4_1:+67872057 Msa0566750:CDS
TATGGTCGAGTTCTTTGGCC+TGG 0.370910 4_1:-67873516 None:intergenic
ATACATATCTAGGCCTATTT+CGG 0.371352 4_1:-67875933 None:intergenic
CATATTTATCCCAATTCTTA+GGG 0.378994 4_1:+67871742 Msa0566750:five_prime_UTR
GCTTTCTGAGTCGTTGTTTG+TGG 0.379653 4_1:+67872715 Msa0566750:CDS
TATTTCCGACCCTGTTCAAA+TGG 0.383252 4_1:-67876391 None:intergenic
CAAGAAGCTGCTGCAGGCAC+AGG 0.383789 4_1:+67873845 Msa0566750:CDS
TGAGAATGTACGCGCCTCTT+TGG 0.389318 4_1:+67872757 Msa0566750:CDS
ATTGAAAACACAACCATGTA+TGG 0.395655 4_1:-67876327 None:intergenic
AGCACACTGTGAATGAATTA+AGG 0.395713 4_1:+67873285 Msa0566750:CDS
TAATAATTTGGAATCAAAGA+TGG 0.396116 4_1:+67872589 Msa0566750:CDS
ATCAAATTGGTTCTTTGCTT+AGG 0.398406 4_1:+67872906 Msa0566750:CDS
TGTCATGTGGTCATGGGCTG+TGG 0.399721 4_1:+67873682 Msa0566750:CDS
GGTATGGCTGCGGTGACTTA+TGG 0.401013 4_1:+67872275 Msa0566750:CDS
ATACGGAAGCGCGATGAATT+CGG 0.405883 4_1:+67872032 Msa0566750:CDS
GGCTTTACTACATTAAGAAC+AGG 0.406993 4_1:-67876161 None:intergenic
CATGGCCAGCATACATATCT+AGG 0.407682 4_1:-67875943 None:intergenic
GGTAATTTGCGACAGGCATT+TGG 0.412774 4_1:+67873704 Msa0566750:CDS
GAATTATGAGATTGCTATTG+AGG 0.413784 4_1:+67872397 Msa0566750:CDS
GGTATTGTGGGCGTGAGCAC+AGG 0.419071 4_1:-67871472 None:intergenic
TCTTATAAACACTACAAATC+TGG 0.419248 4_1:-67872667 None:intergenic
AGAAACTGCGAGGCAATTAG+AGG 0.421139 4_1:+67872109 Msa0566750:CDS
AAGATTTCTGGTAAGGTGAA+TGG 0.421879 4_1:+67872206 Msa0566750:CDS
TGGCTCGGCATGGACTTTGT+TGG 0.426457 4_1:+67875970 Msa0566750:CDS
GGTTAGTTTGGAGTGAAGAT+TGG 0.426514 4_1:-67871493 None:intergenic
ATGCTATTCAATTAAATGTC+CGG 0.428651 4_1:+67871780 Msa0566750:exon
TATGATAAACCCTAAGAATT+GGG 0.432534 4_1:-67871751 None:intergenic
TGCTTTGGAGGATGTTGTTA+AGG 0.434993 4_1:+67873235 Msa0566750:CDS
GACTGTGAATAGGTTAGTTA+AGG 0.436099 4_1:+67872877 Msa0566750:CDS
AAAATGTGTTCATCCCTTGC+TGG 0.440413 4_1:-67874631 None:intergenic
TGTGCAGGCTGGTGCTTTGG+AGG 0.442489 4_1:+67873223 Msa0566750:intron
TTTAAGGAAGGAAGAGAGTG+AGG 0.442980 4_1:+67872544 Msa0566750:CDS
GAAAATGGGTTGAGGGAGGT+TGG 0.445747 4_1:+67872989 Msa0566750:CDS
GTTGTTTGTGGCGCAAGAAA+CGG 0.448855 4_1:+67872727 Msa0566750:CDS
TGAGAACAGAGAAGACTTGA+GGG 0.449088 4_1:+67875909 Msa0566750:CDS
ATGGTCGAGTTCTTTGGCCT+GGG 0.450706 4_1:-67873515 None:intergenic
ATGAGGAAGGAAACTTCGTT+TGG 0.451291 4_1:-67871437 None:intergenic
TGCGAGGCAATTAGAGGAAT+CGG 0.452953 4_1:+67872115 Msa0566750:CDS
CTCTTTATAATGCAGATTGA+GGG 0.453284 4_1:+67873761 Msa0566750:CDS
TCTCTTTATAATGCAGATTG+AGG 0.453775 4_1:+67873760 Msa0566750:CDS
AAGGAATGTACAGAATAATC+AGG 0.455113 4_1:-67876245 None:intergenic
AAAAGTTAGGGATTTGGTTG+AGG 0.457748 4_1:+67872823 Msa0566750:CDS
ATTTCCGACCCTGTTCAAAT+GGG 0.458242 4_1:-67876390 None:intergenic
TAACAGCATCATCACGCAAC+CGG 0.459925 4_1:-67872055 None:intergenic
GACTGATACGCAACAGCAAA+CGG 0.460239 4_1:+67876005 Msa0566750:CDS
ACAGAATGATGCAAGTGTTA+AGG 0.465407 4_1:+67872340 Msa0566750:CDS
CACATCAAATTCACCTTCAC+AGG 0.466563 4_1:+67871872 Msa0566750:CDS
TTTAGTAAGATTCTTGGAGA+TGG 0.466672 4_1:+67873025 Msa0566750:CDS
TTCCAATTATAAGAGAGGTT+CGG 0.467159 4_1:-67876049 None:intergenic
CATTAGCAGCTTCAAAAGAA+AGG 0.469658 4_1:-67874664 None:intergenic
AATCGAATTGAATGTAATTG+TGG 0.470084 4_1:-67871708 None:intergenic
GCAAACGGCTTCTAACGAAA+TGG 0.471284 4_1:+67876020 Msa0566750:CDS
TGCTATTGAGGTTTCGCAGT+TGG 0.472675 4_1:+67872409 Msa0566750:CDS
AGCGGCAGAAAATGGGTTGA+GGG 0.474191 4_1:+67872982 Msa0566750:CDS
ATAAGAGCGTGAGGAGGAAG+AGG 0.475459 4_1:-67871338 None:intergenic
GGCATCTAAGTCGCCGGCGC+CGG 0.475732 4_1:-67871799 None:intergenic
ACCATGCTTGAGCTTTAGCT+TGG 0.476966 4_1:-67874930 None:intergenic
GCAGAGCAAGAAGCTGCTGC+AGG 0.479033 4_1:+67873839 Msa0566750:CDS
TTCAATTAAATGTCCGGCGC+CGG 0.481437 4_1:+67871786 Msa0566750:exon
TATAAGATCGTTGATGATGC+AGG 0.482621 4_1:+67872683 Msa0566750:CDS
TGGAGTGAAGATTGGTATTG+TGG 0.482769 4_1:-67871485 None:intergenic
GATTCTCGCCGAGCTTGATC+AGG 0.482851 4_1:+67871923 Msa0566750:CDS
CGGCGACTTAGATGCCGATT+CGG 0.483746 4_1:+67871806 Msa0566750:CDS
ATTTAGATGAGACTGTGAAT+AGG 0.488303 4_1:+67872867 Msa0566750:CDS
TTAAGGAAGGAAGAGAGTGA+GGG 0.489133 4_1:+67872545 Msa0566750:CDS
CGCCGCCGAGAAAGCCAAAA+CGG 0.489160 4_1:+67871962 Msa0566750:CDS
AAGAAAACTGCAGCCGTTGA+GGG 0.489646 4_1:+67872467 Msa0566750:CDS
AATTTCTTAATTCAGAAGAC+TGG 0.491064 4_1:+67871627 Msa0566750:five_prime_UTR
GAATTCATCGCGCTTCCGTA+TGG 0.491635 4_1:-67872030 None:intergenic
GGAGTGAAGATTGGTATTGT+GGG 0.493649 4_1:-67871484 None:intergenic
AGAGACAGCAGCTGCTGCCA+TGG 0.494691 4_1:+67875786 Msa0566750:CDS
CAACTCATTTGAAGACGGAT+TGG 0.497391 4_1:-67872954 None:intergenic
TGCTGGCCATGGCAGTGGCT+CGG 0.499416 4_1:+67875955 Msa0566750:CDS
TTAAGGCTAGGGATCAAGCT+AGG 0.500217 4_1:+67872357 Msa0566750:CDS
GGGATTGATGTGGATGAGGA+AGG 0.504616 4_1:-67871450 None:intergenic
GCCATGGCAGTGGCTCGGCA+TGG 0.506711 4_1:+67875960 Msa0566750:CDS
ACTTGAGGTCTTCTAGACTA+AGG 0.506773 4_1:+67875848 Msa0566750:CDS
ACGCGCCTCTTTGGCTGGGA+TGG 0.508680 4_1:+67872766 Msa0566750:CDS
GGCTGTGGGTAATTTGCGAC+AGG 0.508723 4_1:+67873697 Msa0566750:CDS
CGATGGTGAAAGATCAAAGA+TGG 0.512405 4_1:-67871372 None:intergenic
AATTGAGAAGATTTCTGGTA+AGG 0.512747 4_1:+67872199 Msa0566750:CDS
GGTTTCTGAGAGTTTAAGGA+AGG 0.515527 4_1:+67872532 Msa0566750:CDS
ATTAGCAGCTTCAAAAGAAA+GGG 0.517822 4_1:-67874663 None:intergenic
TGAACAGCAATTTGTGGCAC+AGG 0.518504 4_1:+67873871 Msa0566750:CDS
GAAACTTCGTTTGGAAGAAA+CGG 0.518703 4_1:-67871428 None:intergenic
GAATAGGTTAGTTAAGGAAA+AGG 0.519027 4_1:+67872883 Msa0566750:CDS
GCAGATTGAGGGGCTAATGA+TGG 0.523203 4_1:+67873772 Msa0566750:CDS
ATGTACGCGCCTCTTTGGCT+GGG 0.523765 4_1:+67872762 Msa0566750:CDS
AGAGGATGAAATATACACTT+TGG 0.525090 4_1:+67873096 Msa0566750:CDS
GTTGATTGTAGATTCTTGGT+GGG 0.528212 4_1:+67874866 Msa0566750:intron
TAGCGGCAGAAAATGGGTTG+AGG 0.529571 4_1:+67872981 Msa0566750:CDS
AAAATTTCCAATTATAAGAG+AGG 0.530012 4_1:-67876054 None:intergenic
AACTATGAACTGAGTCTGAA+AGG 0.532962 4_1:-67874724 None:intergenic
TGCTGGAGATGAGCAGTGAA+AGG 0.534476 4_1:-67874614 None:intergenic
AGCCGTTGAGGGTTTGGAGA+GGG 0.534744 4_1:+67872478 Msa0566750:CDS
GTTGCGTGATGATGCTGTTA+GGG 0.539375 4_1:+67872058 Msa0566750:CDS
TGTTGATTGTAGATTCTTGG+TGG 0.540306 4_1:+67874865 Msa0566750:intron
TCTCTTCAAGTTCCTCCACC+CGG 0.540700 4_1:-67873546 None:intergenic
CCATAGAATGCACCGGGTGG+AGG 0.541339 4_1:+67873534 Msa0566750:CDS
GTCATGTGGTCATGGGCTGT+GGG 0.542457 4_1:+67873683 Msa0566750:CDS
ACAGGGGATTGATGTGGATG+AGG 0.543169 4_1:-67871454 None:intergenic
ATCCCTCTCCAAACCCTCAA+CGG 0.544511 4_1:-67872480 None:intergenic
TCTTAATTCAGAAGACTGGT+TGG 0.544826 4_1:+67871631 Msa0566750:five_prime_UTR
GAAATATACCGGTATGGCTG+CGG 0.544973 4_1:+67872265 Msa0566750:CDS
GAAGAAAACTGCAGCCGTTG+AGG 0.546363 4_1:+67872466 Msa0566750:CDS
TGATTGTAGATTCTTGGTGG+GGG 0.547544 4_1:+67874868 Msa0566750:intron
TGACAATGATCGACCAACAC+TGG 0.549017 4_1:-67876182 None:intergenic
GAGTGCTTTGTCAAAGAGGA+TGG 0.550359 4_1:+67872928 Msa0566750:CDS
GTATTGTGGGCGTGAGCACA+GGG 0.550762 4_1:-67871471 None:intergenic
AGGTGTTGAACAGCAATTTG+TGG 0.550763 4_1:+67873865 Msa0566750:CDS
ATGATGCAAGTGTTAAGGCT+AGG 0.551573 4_1:+67872345 Msa0566750:CDS
TAATGTAACGACAGTATATG+TGG 0.552792 4_1:-67876289 None:intergenic
ATTGTGGTTTAGGTTGTCGA+TGG 0.553011 4_1:-67871692 None:intergenic
TGATGCAAGTGTTAAGGCTA+GGG 0.553468 4_1:+67872346 Msa0566750:CDS
TAAGGATGAGAAGTTGAATG+AGG 0.556456 4_1:+67872511 Msa0566750:CDS
TTCACTGCTCATCTCCAGCA+AGG 0.557887 4_1:+67874617 Msa0566750:CDS
GACGTCGCTGAGCACCGAAT+CGG 0.557895 4_1:-67871820 None:intergenic
GCAGTTGTCAACGCTCAAGC+AGG 0.558280 4_1:+67875705 Msa0566750:intron
TTTCCCCATTTGAACAGGGT+CGG 0.559643 4_1:+67876386 Msa0566750:three_prime_UTR
TTAGGAGTGCTTTGTCAAAG+AGG 0.560450 4_1:+67872924 Msa0566750:CDS
TTGAGAACAGAGAAGACTTG+AGG 0.560542 4_1:+67875908 Msa0566750:CDS
TGCTGTTAGGGAGAAGGAAG+AGG 0.562775 4_1:+67872070 Msa0566750:CDS
CTTGAGGTCTTCTAGACTAA+GGG 0.563951 4_1:+67875849 Msa0566750:CDS
CTAGATATGTATGCTGGCCA+TGG 0.566839 4_1:+67875944 Msa0566750:CDS
AAAGGATGAAGTTACGAAAG+TGG 0.568159 4_1:-67874777 None:intergenic
TCCAAGCTAAAGCTCAAGCA+TGG 0.569147 4_1:+67874929 Msa0566750:CDS
GTCGCAGAAATATACCGGTA+TGG 0.569668 4_1:+67872259 Msa0566750:CDS
TGAGAAATCGAGTCATATGA+TGG 0.570001 4_1:+67872169 Msa0566750:CDS
TAAGCAGCACATAGAAGCCC+AGG 0.570404 4_1:+67873498 Msa0566750:CDS
ATGTATGCTGGCCATGGCAG+TGG 0.573801 4_1:+67875950 Msa0566750:CDS
GCTGGAGATGAGCAGTGAAA+GGG 0.573872 4_1:-67874613 None:intergenic
CCGGTATATTTCTGCGACCG+CGG 0.574878 4_1:-67872254 None:intergenic
AACTCGACCATAGAATGCAC+CGG 0.575532 4_1:+67873527 Msa0566750:CDS
TGCTTGCTCAAGAAGCCATA+CGG 0.576060 4_1:+67872015 Msa0566750:CDS
TAATGTAGTAAAGCCAGTGT+TGG 0.577204 4_1:+67876169 Msa0566750:three_prime_UTR
CGAATCGGCATCTAAGTCGC+CGG 0.577434 4_1:-67871805 None:intergenic
TTGATTGTAGATTCTTGGTG+GGG 0.578249 4_1:+67874867 Msa0566750:intron
GGTACGTTGTTCTCACGTCA+CGG 0.578556 4_1:+67871652 Msa0566750:five_prime_UTR
AAACAACGACTCAGAAAGCT+CGG 0.579527 4_1:-67872711 None:intergenic
TGATGTGATCGGAATTGGAT+CGG 0.580529 4_1:-67871856 None:intergenic
CTGAAGAAGAAATTAACAGA+TGG 0.583950 4_1:+67873807 Msa0566750:CDS
TATTAGTGATTTGAGAGATG+AGG 0.584521 4_1:+67872439 Msa0566750:CDS
CAAGCTCGGCGAGAATCTCA+CGG 0.585055 4_1:-67871917 None:intergenic
ATAGGCCTAGATATGTATGC+TGG 0.587227 4_1:+67875938 Msa0566750:CDS
ATAAGTCACCGCAGCCATAC+CGG 0.588731 4_1:-67872273 None:intergenic
TAGAGGAATCGGCGAAGGAG+CGG 0.590365 4_1:+67872126 Msa0566750:CDS
CCGCGGTCGCAGAAATATAC+CGG 0.590801 4_1:+67872254 Msa0566750:CDS
CTCTCAAGTTAGCAGACTTG+AGG 0.593940 4_1:+67875833 Msa0566750:CDS
AATCTATACATGAGTTGACT+AGG 0.596241 4_1:+67872789 Msa0566750:CDS
GGTGGAGGAACTTGAAGAGA+AGG 0.596408 4_1:+67873549 Msa0566750:CDS
AGTTACGAAAGTGGCAGCAA+AGG 0.597277 4_1:-67874768 None:intergenic
GCAATTAGAGGAATCGGCGA+AGG 0.598822 4_1:+67872121 Msa0566750:CDS
GCAATTTCCCCATTTGAACA+GGG 0.599742 4_1:+67876382 Msa0566750:three_prime_UTR
TCCATGCCGAGCCACTGCCA+TGG 0.602713 4_1:-67875961 None:intergenic
AGAGGCAAAGCAATCCATGT+TGG 0.607377 4_1:+67875735 Msa0566750:CDS
ACTTGAAGAGAAGGAAAGAG+TGG 0.609943 4_1:+67873558 Msa0566750:CDS
TTCAACTGATCAATCAACAA+AGG 0.612891 4_1:-67872623 None:intergenic
TCTTTATAATGCAGATTGAG+GGG 0.613990 4_1:+67873762 Msa0566750:CDS
AGAGACAGAGACGGTAGCGA+TGG 0.614364 4_1:-67871389 None:intergenic
TATGTGGAATGCTTCCATGA+AGG 0.614570 4_1:-67876273 None:intergenic
GGAGCGGCAAGGATTACGAT+CGG 0.614644 4_1:+67872142 Msa0566750:CDS
ATCAAACATAAATACACAAG+GGG 0.616202 4_1:-67876096 None:intergenic
TTTCCGACCCTGTTCAAATG+GGG 0.616570 4_1:-67876389 None:intergenic
GCTCAAGCAGGAACTTGAAG+AGG 0.618199 4_1:+67875717 Msa0566750:CDS
CTCAGCGACGTCGAGGACGA+CGG 0.618536 4_1:+67871831 Msa0566750:CDS
CAGTTCATAGTTCATACTCA+AGG 0.620442 4_1:+67874735 Msa0566750:CDS
TTCGGTGCTCAGCGACGTCG+AGG 0.625351 4_1:+67871824 Msa0566750:CDS
TCACTGCTCATCTCCAGCAA+GGG 0.625998 4_1:+67874618 Msa0566750:CDS
TGAAAGGAGTAACTCAGCAG+AGG 0.626089 4_1:-67874708 None:intergenic
AGTTCATAGTTCATACTCAA+GGG 0.628939 4_1:+67874736 Msa0566750:CDS
GAAGGTGAATTTGATGTGAT+CGG 0.630779 4_1:-67871867 None:intergenic
ACGGAGACTTCATCCTGTGA+AGG 0.633111 4_1:-67871885 None:intergenic
TAAGGCTAGGGATCAAGCTA+GGG 0.634167 4_1:+67872358 Msa0566750:CDS
TGATGATGCTGTTAGGGAGA+AGG 0.635078 4_1:+67872064 Msa0566750:CDS
TAAGAGCGTGAGGAGGAAGA+GGG 0.639625 4_1:-67871337 None:intergenic
GTAACAGAAAAGTCCATACA+TGG 0.642245 4_1:+67876314 Msa0566750:three_prime_UTR
AGATTCCATCCCAGCCAAAG+AGG 0.642943 4_1:-67872771 None:intergenic
CAGCCGTTGAGGGTTTGGAG+AGG 0.644245 4_1:+67872477 Msa0566750:CDS
TTTCTTCTCAGATTCCAACA+TGG 0.645960 4_1:-67875749 None:intergenic
GGAAGCGCGATGAATTCGGC+CGG 0.645981 4_1:+67872036 Msa0566750:CDS
GAATCGGCGAAGGAGCGGCA+AGG 0.647315 4_1:+67872131 Msa0566750:CDS
TGAAGCGAAATAAGAGCGTG+AGG 0.649388 4_1:-67871347 None:intergenic
GAAGTGGAAGCGCTTTGCCG+CGG 0.652202 4_1:+67872237 Msa0566750:CDS
GGCAGAAAATGGGTTGAGGG+AGG 0.653218 4_1:+67872985 Msa0566750:CDS
AGCGAAATAAGAGCGTGAGG+AGG 0.653332 4_1:-67871344 None:intergenic
AAATCAAACATAAATACACA+AGG 0.659117 4_1:-67876098 None:intergenic
GTGAGCACAGGGGATTGATG+TGG 0.660306 4_1:-67871460 None:intergenic
ACTCGACCATAGAATGCACC+GGG 0.661588 4_1:+67873528 Msa0566750:CDS
TTCTAGACTAAGGGACAGAG+TGG 0.663047 4_1:+67875858 Msa0566750:CDS
AATCAAACATAAATACACAA+GGG 0.663567 4_1:-67876097 None:intergenic
GAGAACAGAGAAGACTTGAG+GGG 0.677822 4_1:+67875910 Msa0566750:CDS
GGGGCTAATGATGGACATTG+CGG 0.692078 4_1:+67873781 Msa0566750:CDS
CGACCATAGAATGCACCGGG+TGG 0.695799 4_1:+67873531 Msa0566750:CDS
AATCAAAGATGGAATCGTTG+AGG 0.695950 4_1:+67872600 Msa0566750:CDS
AGCTTCTAGAAGAAACTGCG+AGG 0.719282 4_1:+67872099 Msa0566750:CDS
CTAGGGAACAGATTGAACAG+AGG 0.728016 4_1:+67872375 Msa0566750:CDS
ACTTTGTTGGAATTCAGCAG+CGG 0.730616 4_1:+67875983 Msa0566750:CDS
TATTGTGGGCGTGAGCACAG+GGG 0.761531 4_1:-67871470 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCTCTAAATTTTAATTA+AGG - chr4_1:67871609-67871628 None:intergenic 10.0%
!! TTTAATTCGAAAAGTAATAA+AGG - chr4_1:67871583-67871602 None:intergenic 15.0%
!!! AAATGCACAATTTTATTTAT+TGG + chr4_1:67874041-67874060 Msa0566750:intron 15.0%
!!! AATTTTATTTATTGGCAATT+TGG + chr4_1:67874049-67874068 Msa0566750:intron 15.0%
!! TAATTTCTTTATACAATTAC+TGG + chr4_1:67875016-67875035 Msa0566750:intron 15.0%
!!! TGGTTCATTTAATTTTTTTA+TGG - chr4_1:67875118-67875137 None:intergenic 15.0%
!!! TACATTTTTTCCATTATTTT+TGG + chr4_1:67875500-67875519 Msa0566750:intron 15.0%
!!! TAATAATTTGGAATCAAAGA+TGG + chr4_1:67872589-67872608 Msa0566750:CDS 20.0%
!! TTCAAATTTAGTAAGATTCT+TGG + chr4_1:67873019-67873038 Msa0566750:CDS 20.0%
!! AAATGACAAGTCAAAAAAAA+CGG + chr4_1:67873063-67873082 Msa0566750:CDS 20.0%
!!! TTTGTTTTTATTTCTCTTTC+TGG + chr4_1:67873126-67873145 Msa0566750:intron 20.0%
!! CAGTGTATATTCTAAATTAA+CGG - chr4_1:67874127-67874146 None:intergenic 20.0%
!! ATTTACAGAAGAAATAATTC+TGG - chr4_1:67874249-67874268 None:intergenic 20.0%
!! AAATAAATATAATTTCGGTG+TGG - chr4_1:67874341-67874360 None:intergenic 20.0%
!! ACACCGAAATTATATTTATT+TGG + chr4_1:67874340-67874359 Msa0566750:intron 20.0%
!! GCTCCAAATAAATATAATTT+CGG - chr4_1:67874346-67874365 None:intergenic 20.0%
!!! AATTTATAGTTTTTAAGCCA+AGG - chr4_1:67874432-67874451 None:intergenic 20.0%
!!! ATTTTTCAAGTGTCATATTA+AGG + chr4_1:67875078-67875097 Msa0566750:intron 20.0%
!! AAAATTTCCAATTATAAGAG+AGG - chr4_1:67876057-67876076 None:intergenic 20.0%
!! AATCAAACATAAATACACAA+GGG - chr4_1:67876100-67876119 None:intergenic 20.0%
!! AAATCAAACATAAATACACA+AGG - chr4_1:67876101-67876120 None:intergenic 20.0%
!! AATGTGATTTAAGGTTAGTT+TGG - chr4_1:67871508-67871527 None:intergenic 25.0%
! AGTATAGAGAATGTGATTTA+AGG - chr4_1:67871517-67871536 None:intergenic 25.0%
! AATTTCTTAATTCAGAAGAC+TGG + chr4_1:67871627-67871646 Msa0566750:five_prime_UTR 25.0%
! ATTGAATGTAATTGTGGTTT+AGG - chr4_1:67871705-67871724 None:intergenic 25.0%
! AATCGAATTGAATGTAATTG+TGG - chr4_1:67871711-67871730 None:intergenic 25.0%
! TCATATTTATCCCAATTCTT+AGG + chr4_1:67871741-67871760 Msa0566750:five_prime_UTR 25.0%
! CATATTTATCCCAATTCTTA+GGG + chr4_1:67871742-67871761 Msa0566750:five_prime_UTR 25.0%
! TATGATAAACCCTAAGAATT+GGG - chr4_1:67871754-67871773 None:intergenic 25.0%
! ATATGATAAACCCTAAGAAT+TGG - chr4_1:67871755-67871774 None:intergenic 25.0%
! ATGCTATTCAATTAAATGTC+CGG + chr4_1:67871780-67871799 Msa0566750:exon 25.0%
!!! GAAGGAGTTTGTTAATAATT+TGG + chr4_1:67872577-67872596 Msa0566750:CDS 25.0%
! TCTTATAAACACTACAAATC+TGG - chr4_1:67872670-67872689 None:intergenic 25.0%
!! GATTGTTGTTCAAAAAGTTA+GGG + chr4_1:67872811-67872830 Msa0566750:CDS 25.0%
! AAAAACAACTCATTTGAAGA+CGG - chr4_1:67872962-67872981 None:intergenic 25.0%
!!! TTCAAATGAGTTGTTTTTAG+CGG + chr4_1:67872964-67872983 Msa0566750:CDS 25.0%
!!! TTTGCTATTTGTCTAACTTT+GGG + chr4_1:67873338-67873357 Msa0566750:intron 25.0%
! ATATTTGCTTAACTCCATTA+AGG + chr4_1:67873458-67873477 Msa0566750:intron 25.0%
! TATTTGCTTAACTCCATTAA+GGG + chr4_1:67873459-67873478 Msa0566750:intron 25.0%
!!! TTTTACAAGTTTGCTATGTT+TGG + chr4_1:67873926-67873945 Msa0566750:intron 25.0%
!! CGTTAATTTAGAATATACAC+TGG + chr4_1:67874125-67874144 Msa0566750:intron 25.0%
! GTAAGTACACAAATTATCAA+TGG - chr4_1:67874986-67875005 None:intergenic 25.0%
!! TTGATAATTTGTGTACTTAC+TGG + chr4_1:67874986-67875005 Msa0566750:intron 25.0%
! AAAAATTAGAAGCTTAAGCT+TGG - chr4_1:67875138-67875157 None:intergenic 25.0%
! TGAACATATGAGTTTATGTT+TGG + chr4_1:67875194-67875213 Msa0566750:intron 25.0%
! GAACATATGAGTTTATGTTT+GGG + chr4_1:67875195-67875214 Msa0566750:intron 25.0%
!!! CTTAGAGTAATGTTTGTTAT+CGG + chr4_1:67875395-67875414 Msa0566750:intron 25.0%
!!! TTTTGGAGAATTTATTTGTG+TGG + chr4_1:67875469-67875488 Msa0566750:intron 25.0%
! TGCAACAAGTATTTATGATT+AGG - chr4_1:67875680-67875699 None:intergenic 25.0%
! ATCAAACATAAATACACAAG+GGG - chr4_1:67876099-67876118 None:intergenic 25.0%
!! TTCAATTTTATGTCACAGAA+TGG + chr4_1:67876122-67876141 Msa0566750:three_prime_UTR 25.0%
AAAAAAACAAGAGACAGAGA+CGG - chr4_1:67871401-67871420 None:intergenic 30.0%
!! AATCTCACGGAATTTTTCAA+CGG - chr4_1:67871907-67871926 None:intergenic 30.0%
!! AATTGAGAAGATTTCTGGTA+AGG + chr4_1:67872199-67872218 Msa0566750:CDS 30.0%
! GAATTATGAGATTGCTATTG+AGG + chr4_1:67872397-67872416 Msa0566750:CDS 30.0%
TATTAGTGATTTGAGAGATG+AGG + chr4_1:67872439-67872458 Msa0566750:CDS 30.0%
TTCAACTGATCAATCAACAA+AGG - chr4_1:67872626-67872645 None:intergenic 30.0%
! AATCTATACATGAGTTGACT+AGG + chr4_1:67872789-67872808 Msa0566750:CDS 30.0%
! GGATTGTTGTTCAAAAAGTT+AGG + chr4_1:67872810-67872829 Msa0566750:CDS 30.0%
TGTTCAAAAAGTTAGGGATT+TGG + chr4_1:67872817-67872836 Msa0566750:CDS 30.0%
ATTTAGATGAGACTGTGAAT+AGG + chr4_1:67872867-67872886 Msa0566750:CDS 30.0%
! GAATAGGTTAGTTAAGGAAA+AGG + chr4_1:67872883-67872902 Msa0566750:CDS 30.0%
GTTAAGGAAAAGGATCAAAT+TGG + chr4_1:67872893-67872912 Msa0566750:CDS 30.0%
! ATCAAATTGGTTCTTTGCTT+AGG + chr4_1:67872906-67872925 Msa0566750:CDS 30.0%
TTTAGTAAGATTCTTGGAGA+TGG + chr4_1:67873025-67873044 Msa0566750:CDS 30.0%
AAAAACGGAAAAAGAAGAAG+AGG + chr4_1:67873078-67873097 Msa0566750:CDS 30.0%
AGAGGATGAAATATACACTT+TGG + chr4_1:67873096-67873115 Msa0566750:CDS 30.0%
!! GTTTGCTATTTGTCTAACTT+TGG + chr4_1:67873337-67873356 Msa0566750:intron 30.0%
TACTGAAGAACTTACATCTT+TGG + chr4_1:67873393-67873412 Msa0566750:intron 30.0%
GACAAAACCTTCACAATTAA+GGG - chr4_1:67873632-67873651 None:intergenic 30.0%
! AGAATGTATGTTTTGTCATG+TGG + chr4_1:67873669-67873688 Msa0566750:intron 30.0%
TCTCTTTATAATGCAGATTG+AGG + chr4_1:67873760-67873779 Msa0566750:CDS 30.0%
CTCTTTATAATGCAGATTGA+GGG + chr4_1:67873761-67873780 Msa0566750:CDS 30.0%
TCTTTATAATGCAGATTGAG+GGG + chr4_1:67873762-67873781 Msa0566750:CDS 30.0%
CTGAAGAAGAAATTAACAGA+TGG + chr4_1:67873807-67873826 Msa0566750:CDS 30.0%
AATTTGTAAGTTGCAGTTGA+TGG + chr4_1:67873965-67873984 Msa0566750:intron 30.0%
TACACTGGAATATGTGTATA+TGG - chr4_1:67874289-67874308 None:intergenic 30.0%
! TGAAGTGGAAAAATTGCTTT+TGG + chr4_1:67874401-67874420 Msa0566750:intron 30.0%
!! GAAGTGGAAAAATTGCTTTT+GGG + chr4_1:67874402-67874421 Msa0566750:intron 30.0%
!! AAGTGGAAAAATTGCTTTTG+GGG + chr4_1:67874403-67874422 Msa0566750:intron 30.0%
AACCATCTAAAAAATCTGCA+GGG - chr4_1:67874495-67874514 None:intergenic 30.0%
AAACCATCTAAAAAATCTGC+AGG - chr4_1:67874496-67874515 None:intergenic 30.0%
!!! TTTTGAAATCTATTCCCTTC+TGG - chr4_1:67874542-67874561 None:intergenic 30.0%
ATTAGCAGCTTCAAAAGAAA+GGG - chr4_1:67874666-67874685 None:intergenic 30.0%
AGTTCATAGTTCATACTCAA+GGG + chr4_1:67874736-67874755 Msa0566750:CDS 30.0%
TTGGGATTAAGAAGAAACAA+AGG - chr4_1:67874798-67874817 None:intergenic 30.0%
! CAATGTTGATTGTAGATTCT+TGG + chr4_1:67874862-67874881 Msa0566750:intron 30.0%
CTGAATGAGTTATTCAAGTA+TGG + chr4_1:67874901-67874920 Msa0566750:CDS 30.0%
GACACTTGAAAAATGAAGTT+GGG - chr4_1:67875072-67875091 None:intergenic 30.0%
TGACACTTGAAAAATGAAGT+TGG - chr4_1:67875073-67875092 None:intergenic 30.0%
CGATAACAAACATTACTCTA+AGG - chr4_1:67875397-67875416 None:intergenic 30.0%
!!! TTCCATTATTTTTGGTACAG+TGG + chr4_1:67875508-67875527 Msa0566750:intron 30.0%
AACTAATTAGGCTGTAAATC+TGG + chr4_1:67875565-67875584 Msa0566750:intron 30.0%
TCATAATATCCATTAACAGG+TGG - chr4_1:67875624-67875643 None:intergenic 30.0%
GAGTCATAATATCCATTAAC+AGG - chr4_1:67875627-67875646 None:intergenic 30.0%
TCATGTTAACTGACAATACA+AGG - chr4_1:67875652-67875671 None:intergenic 30.0%
ATACATATCTAGGCCTATTT+CGG - chr4_1:67875936-67875955 None:intergenic 30.0%
TTCCAATTATAAGAGAGGTT+CGG - chr4_1:67876052-67876071 None:intergenic 30.0%
AAGGAATGTACAGAATAATC+AGG - chr4_1:67876248-67876267 None:intergenic 30.0%
TAATGTAACGACAGTATATG+TGG - chr4_1:67876292-67876311 None:intergenic 30.0%
ATTGAAAACACAACCATGTA+TGG - chr4_1:67876330-67876349 None:intergenic 30.0%
! ATACATGGTTGTGTTTTCAA+TGG + chr4_1:67876329-67876348 Msa0566750:three_prime_UTR 30.0%
GAAACTTCGTTTGGAAGAAA+CGG - chr4_1:67871431-67871450 None:intergenic 35.0%
TCTTAATTCAGAAGACTGGT+TGG + chr4_1:67871631-67871650 Msa0566750:five_prime_UTR 35.0%
GAATTTGATGTGATCGGAAT+TGG - chr4_1:67871864-67871883 None:intergenic 35.0%
GAAGGTGAATTTGATGTGAT+CGG - chr4_1:67871870-67871889 None:intergenic 35.0%
GACTTCATTCAACCGATTAA+AGG + chr4_1:67871992-67872011 Msa0566750:CDS 35.0%
TGAGAAATCGAGTCATATGA+TGG + chr4_1:67872169-67872188 Msa0566750:CDS 35.0%
ACTGGAATTGAGAAGATTTC+TGG + chr4_1:67872194-67872213 Msa0566750:CDS 35.0%
!! AAGATTTCTGGTAAGGTGAA+TGG + chr4_1:67872206-67872225 Msa0566750:CDS 35.0%
ACAGAATGATGCAAGTGTTA+AGG + chr4_1:67872340-67872359 Msa0566750:CDS 35.0%
TAAGGATGAGAAGTTGAATG+AGG + chr4_1:67872511-67872530 Msa0566750:CDS 35.0%
! ATGAGGTTTCTGAGAGTTTA+AGG + chr4_1:67872528-67872547 Msa0566750:CDS 35.0%
AATCAAAGATGGAATCGTTG+AGG + chr4_1:67872600-67872619 Msa0566750:CDS 35.0%
!! TATAAGATCGTTGATGATGC+AGG + chr4_1:67872683-67872702 Msa0566750:CDS 35.0%
! AAAAGTTAGGGATTTGGTTG+AGG + chr4_1:67872823-67872842 Msa0566750:CDS 35.0%
TCACAGTCTCATCTAAATTC+TGG - chr4_1:67872865-67872884 None:intergenic 35.0%
! GACTGTGAATAGGTTAGTTA+AGG + chr4_1:67872877-67872896 Msa0566750:CDS 35.0%
!!! TTGTTTTTAGCGGCAGAAAA+TGG + chr4_1:67872974-67872993 Msa0566750:CDS 35.0%
!!! TGTTTTTAGCGGCAGAAAAT+GGG + chr4_1:67872975-67872994 Msa0566750:CDS 35.0%
!!! TTTCTGGTTTTCAACGAAAC+TGG + chr4_1:67873142-67873161 Msa0566750:intron 35.0%
GATACGTAAAGAACTCAACA+AGG - chr4_1:67873200-67873219 None:intergenic 35.0%
AGCACACTGTGAATGAATTA+AGG + chr4_1:67873285-67873304 Msa0566750:CDS 35.0%
ACATGATCCCTTAATTGTGA+AGG + chr4_1:67873622-67873641 Msa0566750:intron 35.0%
CGACAAAACCTTCACAATTA+AGG - chr4_1:67873633-67873652 None:intergenic 35.0%
! TATGTTTTGTCATGTGGTCA+TGG + chr4_1:67873675-67873694 Msa0566750:CDS 35.0%
! ATGTTTTGTCATGTGGTCAT+GGG + chr4_1:67873676-67873695 Msa0566750:CDS 35.0%
GGTATGGAATGCTATTAGTT+AGG + chr4_1:67873892-67873911 Msa0566750:intron 35.0%
!! TACAAGTTTGCTATGTTTGG+AGG + chr4_1:67873929-67873948 Msa0566750:intron 35.0%
! TTTATTTGGAGCAGCAATAG+TGG + chr4_1:67874354-67874373 Msa0566750:intron 35.0%
TAGTGGTCTATCTAAATTGC+AGG + chr4_1:67874371-67874390 Msa0566750:intron 35.0%
TGAAATAAAAAAAGGAGGGG+GGG - chr4_1:67874470-67874489 None:intergenic 35.0%
CTGAAATAAAAAAAGGAGGG+GGG - chr4_1:67874471-67874490 None:intergenic 35.0%
GCTGAAATAAAAAAAGGAGG+GGG - chr4_1:67874472-67874491 None:intergenic 35.0%
GGCTGAAATAAAAAAAGGAG+GGG - chr4_1:67874473-67874492 None:intergenic 35.0%
GGGCTGAAATAAAAAAAGGA+GGG - chr4_1:67874474-67874493 None:intergenic 35.0%
ACCATCTAAAAAATCTGCAG+GGG - chr4_1:67874494-67874513 None:intergenic 35.0%
CATTAGCAGCTTCAAAAGAA+AGG - chr4_1:67874667-67874686 None:intergenic 35.0%
AACTATGAACTGAGTCTGAA+AGG - chr4_1:67874727-67874746 None:intergenic 35.0%
CAGTTCATAGTTCATACTCA+AGG + chr4_1:67874735-67874754 Msa0566750:CDS 35.0%
AAAGGATGAAGTTACGAAAG+TGG - chr4_1:67874780-67874799 None:intergenic 35.0%
! AAGAAGGTGTATCTCACATT+GGG - chr4_1:67874816-67874835 None:intergenic 35.0%
! AAAGAAGGTGTATCTCACAT+TGG - chr4_1:67874817-67874836 None:intergenic 35.0%
ATCTACAATCAACATTGACC+AGG - chr4_1:67874859-67874878 None:intergenic 35.0%
! TGTTGATTGTAGATTCTTGG+TGG + chr4_1:67874865-67874884 Msa0566750:intron 35.0%
GTTGATTGTAGATTCTTGGT+GGG + chr4_1:67874866-67874885 Msa0566750:intron 35.0%
TTGATTGTAGATTCTTGGTG+GGG + chr4_1:67874867-67874886 Msa0566750:intron 35.0%
CACAAATTATCAATGGCTCA+AGG - chr4_1:67874979-67874998 None:intergenic 35.0%
TGTAAATGAATTGAGCCAAG+CGG - chr4_1:67875262-67875281 None:intergenic 35.0%
! TGATGATATGCCTTTGACTT+TGG + chr4_1:67875441-67875460 Msa0566750:intron 35.0%
! GATGATATGCCTTTGACTTT+GGG + chr4_1:67875442-67875461 Msa0566750:intron 35.0%
CAAAAAATGCCCAAAGTCAA+AGG - chr4_1:67875454-67875473 None:intergenic 35.0%
!!! CTTTGACTTTGGGCATTTTT+TGG + chr4_1:67875452-67875471 Msa0566750:intron 35.0%
TACTTTAAGCCACCTGTTAA+TGG + chr4_1:67875612-67875631 Msa0566750:intron 35.0%
TTTCTTCTCAGATTCCAACA+TGG - chr4_1:67875752-67875771 None:intergenic 35.0%
TTCCGAACCTCTCTTATAAT+TGG + chr4_1:67876047-67876066 Msa0566750:exon 35.0%
GGCTTTACTACATTAAGAAC+AGG - chr4_1:67876164-67876183 None:intergenic 35.0%
TAATGTAGTAAAGCCAGTGT+TGG + chr4_1:67876169-67876188 Msa0566750:three_prime_UTR 35.0%
! ACATTCCTTTTATGCCTTCA+TGG + chr4_1:67876259-67876278 Msa0566750:three_prime_UTR 35.0%
GTAACAGAAAAGTCCATACA+TGG + chr4_1:67876314-67876333 Msa0566750:three_prime_UTR 35.0%
! ATGGAAGTCTTTTTGTCTAG+TGG + chr4_1:67876348-67876367 Msa0566750:three_prime_UTR 35.0%
CGATGGTGAAAGATCAAAGA+TGG - chr4_1:67871375-67871394 None:intergenic 40.0%
ATGAGGAAGGAAACTTCGTT+TGG - chr4_1:67871440-67871459 None:intergenic 40.0%
GGAGTGAAGATTGGTATTGT+GGG - chr4_1:67871487-67871506 None:intergenic 40.0%
TGGAGTGAAGATTGGTATTG+TGG - chr4_1:67871488-67871507 None:intergenic 40.0%
!! GGTTAGTTTGGAGTGAAGAT+TGG - chr4_1:67871496-67871515 None:intergenic 40.0%
!! ATTGTGGTTTAGGTTGTCGA+TGG - chr4_1:67871695-67871714 None:intergenic 40.0%
TGATGTGATCGGAATTGGAT+CGG - chr4_1:67871859-67871878 None:intergenic 40.0%
CACATCAAATTCACCTTCAC+AGG + chr4_1:67871872-67871891 Msa0566750:CDS 40.0%
!! TTGCTTTTCCTGATCAAGCT+CGG - chr4_1:67871934-67871953 None:intergenic 40.0%
!!! TAACTCCGTTTTGGCTTTCT+CGG - chr4_1:67871970-67871989 None:intergenic 40.0%
! TGAAGTCTGTAACTCCGTTT+TGG - chr4_1:67871979-67871998 None:intergenic 40.0%
CTTGAGCAAGCACCTTTAAT+CGG - chr4_1:67872007-67872026 None:intergenic 40.0%
TCGAGTCATATGATGGTTAC+TGG + chr4_1:67872176-67872195 Msa0566750:CDS 40.0%
! TCTGGTAAGGTGAATGGTTT+TGG + chr4_1:67872212-67872231 Msa0566750:CDS 40.0%
ATGATGCAAGTGTTAAGGCT+AGG + chr4_1:67872345-67872364 Msa0566750:CDS 40.0%
TGATGCAAGTGTTAAGGCTA+GGG + chr4_1:67872346-67872365 Msa0566750:CDS 40.0%
! GGTTTCTGAGAGTTTAAGGA+AGG + chr4_1:67872532-67872551 Msa0566750:CDS 40.0%
TTTAAGGAAGGAAGAGAGTG+AGG + chr4_1:67872544-67872563 Msa0566750:CDS 40.0%
TTAAGGAAGGAAGAGAGTGA+GGG + chr4_1:67872545-67872564 Msa0566750:CDS 40.0%
AAACAACGACTCAGAAAGCT+CGG - chr4_1:67872714-67872733 None:intergenic 40.0%
!! TTAGGAGTGCTTTGTCAAAG+AGG + chr4_1:67872924-67872943 Msa0566750:CDS 40.0%
CAACTCATTTGAAGACGGAT+TGG - chr4_1:67872957-67872976 None:intergenic 40.0%
!! TGCTTTGGAGGATGTTGTTA+AGG + chr4_1:67873235-67873254 Msa0566750:CDS 40.0%
AAACTCAACTCTGCCCTTAA+TGG - chr4_1:67873475-67873494 None:intergenic 40.0%
CATTCTATGGTCGAGTTCTT+TGG - chr4_1:67873524-67873543 None:intergenic 40.0%
ACTTGAAGAGAAGGAAAGAG+TGG + chr4_1:67873558-67873577 Msa0566750:CDS 40.0%
!! AGGTGTTGAACAGCAATTTG+TGG + chr4_1:67873865-67873884 Msa0566750:CDS 40.0%
CATCATTGCACAACTAAAGC+TGG - chr4_1:67874083-67874102 None:intergenic 40.0%
TGATCGCAGTGACATAAACA+TGG - chr4_1:67874163-67874182 None:intergenic 40.0%
TAGAGCTAAAGGGAAAAGGT+AGG - chr4_1:67874219-67874238 None:intergenic 40.0%
!!! ACCTTTTCCCTTTAGCTCTA+TGG + chr4_1:67874219-67874238 Msa0566750:intron 40.0%
ACCATAGAGCTAAAGGGAAA+AGG - chr4_1:67874223-67874242 None:intergenic 40.0%
TGGAAGACCATAGAGCTAAA+GGG - chr4_1:67874229-67874248 None:intergenic 40.0%
TGGTCTATCTAAATTGCAGG+CGG + chr4_1:67874374-67874393 Msa0566750:intron 40.0%
AAATAAAAAAAGGAGGGGGG+GGG - chr4_1:67874468-67874487 None:intergenic 40.0%
GAAATAAAAAAAGGAGGGGG+GGG - chr4_1:67874469-67874488 None:intergenic 40.0%
GGGGCTGAAATAAAAAAAGG+AGG - chr4_1:67874475-67874494 None:intergenic 40.0%
GCAGGGGCTGAAATAAAAAA+AGG - chr4_1:67874478-67874497 None:intergenic 40.0%
AAATCTATTCCCTTCTGGTG+GGG - chr4_1:67874537-67874556 None:intergenic 40.0%
GAAATCTATTCCCTTCTGGT+GGG - chr4_1:67874538-67874557 None:intergenic 40.0%
TGAAATCTATTCCCTTCTGG+TGG - chr4_1:67874539-67874558 None:intergenic 40.0%
AAAATGTGTTCATCCCTTGC+TGG - chr4_1:67874634-67874653 None:intergenic 40.0%
! GAAGCTGCTAATGCATTTTC+AGG + chr4_1:67874674-67874693 Msa0566750:CDS 40.0%
AAGTGGCAGCAAAGGAAAAA+GGG - chr4_1:67874763-67874782 None:intergenic 40.0%
AAAGTGGCAGCAAAGGAAAA+AGG - chr4_1:67874764-67874783 None:intergenic 40.0%
AAGAACGGAGAATGGAAAGA+AGG - chr4_1:67874832-67874851 None:intergenic 40.0%
TGATTGTAGATTCTTGGTGG+GGG + chr4_1:67874868-67874887 Msa0566750:intron 40.0%
! GAGTGCTCTAAGTTTAGACT+TGG - chr4_1:67875240-67875259 None:intergenic 40.0%
TCGTGAGTAAGAAGATGTCA+TGG - chr4_1:67875314-67875333 None:intergenic 40.0%
CTTACTCACGACAAACTCAA+TGG + chr4_1:67875323-67875342 Msa0566750:intron 40.0%
AATAACCGTGAGAAACACCA+AGG - chr4_1:67875359-67875378 None:intergenic 40.0%
GGCCACTGTACCAAAAATAA+TGG - chr4_1:67875513-67875532 None:intergenic 40.0%
TGCTTGGGGATGAACTAATT+AGG + chr4_1:67875553-67875572 Msa0566750:intron 40.0%
AGGCTGTAAATCTGGTAGAT+TGG + chr4_1:67875573-67875592 Msa0566750:intron 40.0%
ACTTGAGGTCTTCTAGACTA+AGG + chr4_1:67875848-67875867 Msa0566750:CDS 40.0%
CTTGAGGTCTTCTAGACTAA+GGG + chr4_1:67875849-67875868 Msa0566750:CDS 40.0%
TTGAGAACAGAGAAGACTTG+AGG + chr4_1:67875908-67875927 Msa0566750:CDS 40.0%
TGAGAACAGAGAAGACTTGA+GGG + chr4_1:67875909-67875928 Msa0566750:CDS 40.0%
ATAGGCCTAGATATGTATGC+TGG + chr4_1:67875938-67875957 Msa0566750:CDS 40.0%
ACTTTGTTGGAATTCAGCAG+CGG + chr4_1:67875983-67876002 Msa0566750:CDS 40.0%
! TGCTTCCATGAAGGCATAAA+AGG - chr4_1:67876267-67876286 None:intergenic 40.0%
TATGTGGAATGCTTCCATGA+AGG - chr4_1:67876276-67876295 None:intergenic 40.0%
TGCAATTTCCCCATTTGAAC+AGG + chr4_1:67876381-67876400 Msa0566750:three_prime_UTR 40.0%
GCAATTTCCCCATTTGAACA+GGG + chr4_1:67876382-67876401 Msa0566750:three_prime_UTR 40.0%
ATTTCCGACCCTGTTCAAAT+GGG - chr4_1:67876393-67876412 None:intergenic 40.0%
TATTTCCGACCCTGTTCAAA+TGG - chr4_1:67876394-67876413 None:intergenic 40.0%
! TGAAGCGAAATAAGAGCGTG+AGG - chr4_1:67871350-67871369 None:intergenic 45.0%
TTCAATTAAATGTCCGGCGC+CGG + chr4_1:67871786-67871805 Msa0566750:exon 45.0%
TGCTTGCTCAAGAAGCCATA+CGG + chr4_1:67872015-67872034 Msa0566750:CDS 45.0%
! ATACGGAAGCGCGATGAATT+CGG + chr4_1:67872032-67872051 Msa0566750:CDS 45.0%
TAACAGCATCATCACGCAAC+CGG - chr4_1:67872058-67872077 None:intergenic 45.0%
! GTTGCGTGATGATGCTGTTA+GGG + chr4_1:67872058-67872077 Msa0566750:CDS 45.0%
! TGATGATGCTGTTAGGGAGA+AGG + chr4_1:67872064-67872083 Msa0566750:CDS 45.0%
! AGCTTCTAGAAGAAACTGCG+AGG + chr4_1:67872099-67872118 Msa0566750:CDS 45.0%
AGAAACTGCGAGGCAATTAG+AGG + chr4_1:67872109-67872128 Msa0566750:CDS 45.0%
TGCGAGGCAATTAGAGGAAT+CGG + chr4_1:67872115-67872134 Msa0566750:CDS 45.0%
!!! GGTAAGGTGAATGGTTTTGG+TGG + chr4_1:67872215-67872234 Msa0566750:CDS 45.0%
!!! GTGAATGGTTTTGGTGGAAG+TGG + chr4_1:67872221-67872240 Msa0566750:CDS 45.0%
GTCGCAGAAATATACCGGTA+TGG + chr4_1:67872259-67872278 Msa0566750:CDS 45.0%
GAAATATACCGGTATGGCTG+CGG + chr4_1:67872265-67872284 Msa0566750:CDS 45.0%
TTAAGGCTAGGGATCAAGCT+AGG + chr4_1:67872357-67872376 Msa0566750:CDS 45.0%
TAAGGCTAGGGATCAAGCTA+GGG + chr4_1:67872358-67872377 Msa0566750:CDS 45.0%
CTAGGGAACAGATTGAACAG+AGG + chr4_1:67872375-67872394 Msa0566750:CDS 45.0%
TGCTATTGAGGTTTCGCAGT+TGG + chr4_1:67872409-67872428 Msa0566750:CDS 45.0%
AAGAAAACTGCAGCCGTTGA+GGG + chr4_1:67872467-67872486 Msa0566750:CDS 45.0%
! GGAGAGGGATTTGGTTGTTA+AGG + chr4_1:67872493-67872512 Msa0566750:CDS 45.0%
GCTTTCTGAGTCGTTGTTTG+TGG + chr4_1:67872715-67872734 Msa0566750:CDS 45.0%
GTTGTTTGTGGCGCAAGAAA+CGG + chr4_1:67872727-67872746 Msa0566750:CDS 45.0%
GAGTGCTTTGTCAAAGAGGA+TGG + chr4_1:67872928-67872947 Msa0566750:CDS 45.0%
TCTTTACGTATCCACTGTGC+AGG + chr4_1:67873208-67873227 Msa0566750:intron 45.0%
AACTCGACCATAGAATGCAC+CGG + chr4_1:67873527-67873546 Msa0566750:CDS 45.0%
! GGTAATTTGCGACAGGCATT+TGG + chr4_1:67873704-67873723 Msa0566750:CDS 45.0%
TGAACAGCAATTTGTGGCAC+AGG + chr4_1:67873871-67873890 Msa0566750:CDS 45.0%
AGCAATTTGTGGCACAGGTA+TGG + chr4_1:67873876-67873895 Msa0566750:intron 45.0%
CTGGAAGACCATAGAGCTAA+AGG - chr4_1:67874230-67874249 None:intergenic 45.0%
!!! GCCCCTGCAGATTTTTTAGA+TGG + chr4_1:67874490-67874509 Msa0566750:intron 45.0%
AATCTATTCCCTTCTGGTGG+GGG - chr4_1:67874536-67874555 None:intergenic 45.0%
AGTTCGATGTGTGTCATGCT+AGG + chr4_1:67874577-67874596 Msa0566750:intron 45.0%
TGAAAGGAGTAACTCAGCAG+AGG - chr4_1:67874711-67874730 None:intergenic 45.0%
AGTGGCAGCAAAGGAAAAAG+GGG - chr4_1:67874762-67874781 None:intergenic 45.0%
AGTTACGAAAGTGGCAGCAA+AGG - chr4_1:67874771-67874790 None:intergenic 45.0%
CATTGACCAGGAGAGAAGAA+CGG - chr4_1:67874847-67874866 None:intergenic 45.0%
TCCAAGCTAAAGCTCAAGCA+TGG + chr4_1:67874929-67874948 Msa0566750:CDS 45.0%
! ACCATGCTTGAGCTTTAGCT+TGG - chr4_1:67874933-67874952 None:intergenic 45.0%
! TAAACTTAGAGCACTCCGCT+TGG + chr4_1:67875244-67875263 Msa0566750:intron 45.0%
TCAATGGATCCTTTCAGCCT+TGG + chr4_1:67875339-67875358 Msa0566750:intron 45.0%
TGAGAAACACCAAGGCTGAA+AGG - chr4_1:67875351-67875370 None:intergenic 45.0%
!! TTCAGCCTTGGTGTTTCTCA+CGG + chr4_1:67875351-67875370 Msa0566750:intron 45.0%
AGAGGCAAAGCAATCCATGT+TGG + chr4_1:67875735-67875754 Msa0566750:CDS 45.0%
AGATTTCTCTGCTGCATCTC+TGG - chr4_1:67875815-67875834 None:intergenic 45.0%
CTCTCAAGTTAGCAGACTTG+AGG + chr4_1:67875833-67875852 Msa0566750:CDS 45.0%
TTCTAGACTAAGGGACAGAG+TGG + chr4_1:67875858-67875877 Msa0566750:CDS 45.0%
GAGAACAGAGAAGACTTGAG+GGG + chr4_1:67875910-67875929 Msa0566750:CDS 45.0%
CATGGCCAGCATACATATCT+AGG - chr4_1:67875946-67875965 None:intergenic 45.0%
CTAGATATGTATGCTGGCCA+TGG + chr4_1:67875944-67875963 Msa0566750:CDS 45.0%
GACTGATACGCAACAGCAAA+CGG + chr4_1:67876005-67876024 Msa0566750:CDS 45.0%
GCAAACGGCTTCTAACGAAA+TGG + chr4_1:67876020-67876039 Msa0566750:CDS 45.0%
TGACAATGATCGACCAACAC+TGG - chr4_1:67876185-67876204 None:intergenic 45.0%
TGTCATGTTGCAGCAGCATT+TGG + chr4_1:67876200-67876219 Msa0566750:three_prime_UTR 45.0%
TTTCCCCATTTGAACAGGGT+CGG + chr4_1:67876386-67876405 Msa0566750:three_prime_UTR 45.0%
TTTCCGACCCTGTTCAAATG+GGG - chr4_1:67876392-67876411 None:intergenic 45.0%
! TAAGAGCGTGAGGAGGAAGA+GGG - chr4_1:67871340-67871359 None:intergenic 50.0%
! ATAAGAGCGTGAGGAGGAAG+AGG - chr4_1:67871341-67871360 None:intergenic 50.0%
! AGCGAAATAAGAGCGTGAGG+AGG - chr4_1:67871347-67871366 None:intergenic 50.0%
GGGATTGATGTGGATGAGGA+AGG - chr4_1:67871453-67871472 None:intergenic 50.0%
ACAGGGGATTGATGTGGATG+AGG - chr4_1:67871457-67871476 None:intergenic 50.0%
GGTACGTTGTTCTCACGTCA+CGG + chr4_1:67871652-67871671 Msa0566750:five_prime_UTR 50.0%
ACGGAGACTTCATCCTGTGA+AGG - chr4_1:67871888-67871907 None:intergenic 50.0%
GAATTCATCGCGCTTCCGTA+TGG - chr4_1:67872033-67872052 None:intergenic 50.0%
! GGTTGCGTGATGATGCTGTT+AGG + chr4_1:67872057-67872076 Msa0566750:CDS 50.0%
TGCTGTTAGGGAGAAGGAAG+AGG + chr4_1:67872070-67872089 Msa0566750:CDS 50.0%
GCAATTAGAGGAATCGGCGA+AGG + chr4_1:67872121-67872140 Msa0566750:CDS 50.0%
ATAAGTCACCGCAGCCATAC+CGG - chr4_1:67872276-67872295 None:intergenic 50.0%
GAAGAAAACTGCAGCCGTTG+AGG + chr4_1:67872466-67872485 Msa0566750:CDS 50.0%
ATCCCTCTCCAAACCCTCAA+CGG - chr4_1:67872483-67872502 None:intergenic 50.0%
TGAGGGTTTGGAGAGGGATT+TGG + chr4_1:67872484-67872503 Msa0566750:CDS 50.0%
GAGTGAGGGTTTGCAGTTGA+AGG + chr4_1:67872559-67872578 Msa0566750:CDS 50.0%
TGAGAATGTACGCGCCTCTT+TGG + chr4_1:67872757-67872776 Msa0566750:CDS 50.0%
AGATTCCATCCCAGCCAAAG+AGG - chr4_1:67872774-67872793 None:intergenic 50.0%
!! TAGCGGCAGAAAATGGGTTG+AGG + chr4_1:67872981-67873000 Msa0566750:CDS 50.0%
!! AGCGGCAGAAAATGGGTTGA+GGG + chr4_1:67872982-67873001 Msa0566750:CDS 50.0%
!! GAAAATGGGTTGAGGGAGGT+TGG + chr4_1:67872989-67873008 Msa0566750:CDS 50.0%
TAAGCAGCACATAGAAGCCC+AGG + chr4_1:67873498-67873517 Msa0566750:CDS 50.0%
ATGGTCGAGTTCTTTGGCCT+GGG - chr4_1:67873518-67873537 None:intergenic 50.0%
TATGGTCGAGTTCTTTGGCC+TGG - chr4_1:67873519-67873538 None:intergenic 50.0%
ACTCGACCATAGAATGCACC+GGG + chr4_1:67873528-67873547 Msa0566750:CDS 50.0%
! TCTCTTCAAGTTCCTCCACC+CGG - chr4_1:67873549-67873568 None:intergenic 50.0%
GGTGGAGGAACTTGAAGAGA+AGG + chr4_1:67873549-67873568 Msa0566750:CDS 50.0%
GCAGATTGAGGGGCTAATGA+TGG + chr4_1:67873772-67873791 Msa0566750:CDS 50.0%
!! GGGGCTAATGATGGACATTG+CGG + chr4_1:67873781-67873800 Msa0566750:CDS 50.0%
TGCAGGACACAACACTACAC+TGG - chr4_1:67874304-67874323 None:intergenic 50.0%
ATTGCAGGCGGATAGTGAAG+TGG + chr4_1:67874386-67874405 Msa0566750:intron 50.0%
!!! AATTGCTTTTGGGGCTGCCT+TGG + chr4_1:67874412-67874431 Msa0566750:intron 50.0%
! TCATGTTTTCCCCCACCAGA+AGG + chr4_1:67874524-67874543 Msa0566750:intron 50.0%
! CATGTTTTCCCCCACCAGAA+GGG + chr4_1:67874525-67874544 Msa0566750:intron 50.0%
GCTGGAGATGAGCAGTGAAA+GGG - chr4_1:67874616-67874635 None:intergenic 50.0%
TGCTGGAGATGAGCAGTGAA+AGG - chr4_1:67874617-67874636 None:intergenic 50.0%
TTCACTGCTCATCTCCAGCA+AGG + chr4_1:67874617-67874636 Msa0566750:CDS 50.0%
TCACTGCTCATCTCCAGCAA+GGG + chr4_1:67874618-67874637 Msa0566750:CDS 50.0%
CAGGAGAGAAGAACGGAGAA+TGG - chr4_1:67874840-67874859 None:intergenic 50.0%
CATTCTCCGTTCTTCTCTCC+TGG + chr4_1:67874838-67874857 Msa0566750:intron 50.0%
TTGGTACAGTGGCCATTCGT+TGG + chr4_1:67875519-67875538 Msa0566750:intron 50.0%
GCTCAAGCAGGAACTTGAAG+AGG + chr4_1:67875717-67875736 Msa0566750:CDS 50.0%
AAGACTTGAGGGGCCGAAAT+AGG + chr4_1:67875920-67875939 Msa0566750:CDS 50.0%
AGAGACAGAGACGGTAGCGA+TGG - chr4_1:67871392-67871411 None:intergenic 55.0%
GTGAGCACAGGGGATTGATG+TGG - chr4_1:67871463-67871482 None:intergenic 55.0%
TATTGTGGGCGTGAGCACAG+GGG - chr4_1:67871473-67871492 None:intergenic 55.0%
GTATTGTGGGCGTGAGCACA+GGG - chr4_1:67871474-67871493 None:intergenic 55.0%
CGAATCGGCATCTAAGTCGC+CGG - chr4_1:67871808-67871827 None:intergenic 55.0%
! CGGCGACTTAGATGCCGATT+CGG + chr4_1:67871806-67871825 Msa0566750:CDS 55.0%
CAAGCTCGGCGAGAATCTCA+CGG - chr4_1:67871920-67871939 None:intergenic 55.0%
GATTCTCGCCGAGCTTGATC+AGG + chr4_1:67871923-67871942 Msa0566750:CDS 55.0%
!!! CTCCGTTTTGGCTTTCTCGG+CGG - chr4_1:67871967-67871986 None:intergenic 55.0%
TAGAGGAATCGGCGAAGGAG+CGG + chr4_1:67872126-67872145 Msa0566750:CDS 55.0%
GGAGCGGCAAGGATTACGAT+CGG + chr4_1:67872142-67872161 Msa0566750:CDS 55.0%
! CCGGTATATTTCTGCGACCG+CGG - chr4_1:67872257-67872276 None:intergenic 55.0%
CCGCGGTCGCAGAAATATAC+CGG + chr4_1:67872254-67872273 Msa0566750:CDS 55.0%
GGTATGGCTGCGGTGACTTA+TGG + chr4_1:67872275-67872294 Msa0566750:CDS 55.0%
AACTGCAGCCGTTGAGGGTT+TGG + chr4_1:67872472-67872491 Msa0566750:CDS 55.0%
AGCCGTTGAGGGTTTGGAGA+GGG + chr4_1:67872478-67872497 Msa0566750:CDS 55.0%
AATGTACGCGCCTCTTTGGC+TGG + chr4_1:67872761-67872780 Msa0566750:CDS 55.0%
ATGTACGCGCCTCTTTGGCT+GGG + chr4_1:67872762-67872781 Msa0566750:CDS 55.0%
!! GGCAGAAAATGGGTTGAGGG+AGG + chr4_1:67872985-67873004 Msa0566750:CDS 55.0%
TACGTATCCACTGTGCAGGC+TGG + chr4_1:67873212-67873231 Msa0566750:intron 55.0%
! TGTCATGTGGTCATGGGCTG+TGG + chr4_1:67873682-67873701 Msa0566750:CDS 55.0%
! GTCATGTGGTCATGGGCTGT+GGG + chr4_1:67873683-67873702 Msa0566750:CDS 55.0%
! GGCTGTGGGTAATTTGCGAC+AGG + chr4_1:67873697-67873716 Msa0566750:CDS 55.0%
GTAGTGTTGTGTCCTGCAGC+TGG + chr4_1:67874306-67874325 Msa0566750:intron 55.0%
GCAGTTGTCAACGCTCAAGC+AGG + chr4_1:67875705-67875724 Msa0566750:intron 55.0%
ATGTATGCTGGCCATGGCAG+TGG + chr4_1:67875950-67875969 Msa0566750:CDS 55.0%
! TGGCTCGGCATGGACTTTGT+TGG + chr4_1:67875970-67875989 Msa0566750:CDS 55.0%
GGTATTGTGGGCGTGAGCAC+AGG - chr4_1:67871475-67871494 None:intergenic 60.0%
!! GACGTCGCTGAGCACCGAAT+CGG - chr4_1:67871823-67871842 None:intergenic 60.0%
CGCCGCCGAGAAAGCCAAAA+CGG + chr4_1:67871962-67871981 Msa0566750:CDS 60.0%
! GGAAGCGCGATGAATTCGGC+CGG + chr4_1:67872036-67872055 Msa0566750:CDS 60.0%
!! GAAGTGGAAGCGCTTTGCCG+CGG + chr4_1:67872237-67872256 Msa0566750:CDS 60.0%
CAGCCGTTGAGGGTTTGGAG+AGG + chr4_1:67872477-67872496 Msa0566750:CDS 60.0%
! CAAAGCACCAGCCTGCACAG+TGG - chr4_1:67873222-67873241 None:intergenic 60.0%
CACTGTGCAGGCTGGTGCTT+TGG + chr4_1:67873220-67873239 Msa0566750:intron 60.0%
TGTGCAGGCTGGTGCTTTGG+AGG + chr4_1:67873223-67873242 Msa0566750:intron 60.0%
CGACCATAGAATGCACCGGG+TGG + chr4_1:67873531-67873550 Msa0566750:CDS 60.0%
CCTCCACCCGGTGCATTCTA+TGG - chr4_1:67873537-67873556 None:intergenic 60.0%
CCATAGAATGCACCGGGTGG+AGG + chr4_1:67873534-67873553 Msa0566750:CDS 60.0%
GCAGAGCAAGAAGCTGCTGC+AGG + chr4_1:67873839-67873858 Msa0566750:CDS 60.0%
CAAGAAGCTGCTGCAGGCAC+AGG + chr4_1:67873845-67873864 Msa0566750:CDS 60.0%
AAAAGGAGGGGGGGGGATGA+GGG - chr4_1:67874461-67874480 None:intergenic 60.0%
AAAAAGGAGGGGGGGGGATG+AGG - chr4_1:67874462-67874481 None:intergenic 60.0%
GTTCATCCCCAAGCAGCGCA+GGG - chr4_1:67875548-67875567 None:intergenic 60.0%
AGTTCATCCCCAAGCAGCGC+AGG - chr4_1:67875549-67875568 None:intergenic 60.0%
!! TTCGGTGCTCAGCGACGTCG+AGG + chr4_1:67871824-67871843 Msa0566750:CDS 65.0%
CTCAGCGACGTCGAGGACGA+CGG + chr4_1:67871831-67871850 Msa0566750:CDS 65.0%
GAATCGGCGAAGGAGCGGCA+AGG + chr4_1:67872131-67872150 Msa0566750:CDS 65.0%
ACGCGCCTCTTTGGCTGGGA+TGG + chr4_1:67872766-67872785 Msa0566750:CDS 65.0%
AGCGCAGGGCAGCCAACGAA+TGG - chr4_1:67875534-67875553 None:intergenic 65.0%
TTGGCTGCCCTGCGCTGCTT+GGG + chr4_1:67875538-67875557 Msa0566750:intron 65.0%
TGCTGGCCATGGCAGTGGCT+CGG + chr4_1:67875955-67875974 Msa0566750:CDS 65.0%
TCCATGCCGAGCCACTGCCA+TGG - chr4_1:67875964-67875983 None:intergenic 65.0%
GGCATCTAAGTCGCCGGCGC+CGG - chr4_1:67871802-67871821 None:intergenic 70.0%
GTGTCCTGCAGCTGGAGCGC+TGG + chr4_1:67874314-67874333 Msa0566750:intron 70.0%
TGGTCCAGCGCTCCAGCTGC+AGG - chr4_1:67874321-67874340 None:intergenic 70.0%
GTTGGCTGCCCTGCGCTGCT+TGG + chr4_1:67875537-67875556 Msa0566750:intron 70.0%
TGGCTGCCCTGCGCTGCTTG+GGG + chr4_1:67875539-67875558 Msa0566750:intron 70.0%
! GCCATGGCAGTGGCTCGGCA+TGG + chr4_1:67875960-67875979 Msa0566750:CDS 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 67871307 67876444 67871307 ID=Msa0566750;Name=Msa0566750
chr4_1 mRNA 67871307 67876444 67871307 ID=Msa0566750-mRNA-1;Parent=Msa0566750;Name=Msa0566750-mRNA-1;_AED=0.07;_eAED=0.08;_QI=396|0.42|0.62|0.75|0.85|0.75|8|379|788
chr4_1 exon 67871307 67871519 67871307 ID=Msa0566750-mRNA-1:exon:22283;Parent=Msa0566750-mRNA-1
chr4_1 exon 67871612 67873117 67871612 ID=Msa0566750-mRNA-1:exon:22284;Parent=Msa0566750-mRNA-1
chr4_1 exon 67873230 67873306 67873230 ID=Msa0566750-mRNA-1:exon:22285;Parent=Msa0566750-mRNA-1
chr4_1 exon 67873480 67873591 67873480 ID=Msa0566750-mRNA-1:exon:22286;Parent=Msa0566750-mRNA-1
chr4_1 exon 67873671 67873892 67873671 ID=Msa0566750-mRNA-1:exon:22287;Parent=Msa0566750-mRNA-1
chr4_1 exon 67874599 67874784 67874599 ID=Msa0566750-mRNA-1:exon:22288;Parent=Msa0566750-mRNA-1
chr4_1 exon 67874877 67874966 67874877 ID=Msa0566750-mRNA-1:exon:22289;Parent=Msa0566750-mRNA-1
chr4_1 exon 67875709 67876444 67875709 ID=Msa0566750-mRNA-1:exon:22290;Parent=Msa0566750-mRNA-1
chr4_1 five_prime_UTR 67871307 67871519 67871307 ID=Msa0566750-mRNA-1:five_prime_utr;Parent=Msa0566750-mRNA-1
chr4_1 five_prime_UTR 67871612 67871794 67871612 ID=Msa0566750-mRNA-1:five_prime_utr;Parent=Msa0566750-mRNA-1
chr4_1 CDS 67871795 67873117 67871795 ID=Msa0566750-mRNA-1:cds;Parent=Msa0566750-mRNA-1
chr4_1 CDS 67873230 67873306 67873230 ID=Msa0566750-mRNA-1:cds;Parent=Msa0566750-mRNA-1
chr4_1 CDS 67873480 67873591 67873480 ID=Msa0566750-mRNA-1:cds;Parent=Msa0566750-mRNA-1
chr4_1 CDS 67873671 67873892 67873671 ID=Msa0566750-mRNA-1:cds;Parent=Msa0566750-mRNA-1
chr4_1 CDS 67874599 67874784 67874599 ID=Msa0566750-mRNA-1:cds;Parent=Msa0566750-mRNA-1
chr4_1 CDS 67874877 67874966 67874877 ID=Msa0566750-mRNA-1:cds;Parent=Msa0566750-mRNA-1
chr4_1 CDS 67875709 67876065 67875709 ID=Msa0566750-mRNA-1:cds;Parent=Msa0566750-mRNA-1
chr4_1 three_prime_UTR 67876066 67876444 67876066 ID=Msa0566750-mRNA-1:three_prime_utr;Parent=Msa0566750-mRNA-1
Gene Sequence

>Msa0566750

ATGTCCGGCGCCGGCGACTTAGATGCCGATTCGGTGCTCAGCGACGTCGAGGACGACGGCGCCGATCCAATTCCGATCACATCAAATTCACCTTCACAGGATGAAGTCTCCGTTGAAAAATTCCGTGAGATTCTCGCCGAGCTTGATCAGGAAAAGCAAGCACGCATCGCCGCCGAGAAAGCCAAAACGGAGTTACAGACTTCATTCAACCGATTAAAGGTGCTTGCTCAAGAAGCCATACGGAAGCGCGATGAATTCGGCCGGTTGCGTGATGATGCTGTTAGGGAGAAGGAAGAGGCTACGAAGCTTCTAGAAGAAACTGCGAGGCAATTAGAGGAATCGGCGAAGGAGCGGCAAGGATTACGATCGGAGATTGAGAAATCGAGTCATATGATGGTTACTGGAATTGAGAAGATTTCTGGTAAGGTGAATGGTTTTGGTGGAAGTGGAAGCGCTTTGCCGCGGTCGCAGAAATATACCGGTATGGCTGCGGTGACTTATGGTGTTATAAAGAGAGCGAATGAGATTGTTGAAGAGTTGTTGAAACAGAATGATGCAAGTGTTAAGGCTAGGGATCAAGCTAGGGAACAGATTGAACAGAGGAATTATGAGATTGCTATTGAGGTTTCGCAGTTGGAAGCAACTATTAGTGATTTGAGAGATGAGGTTGCGAAGAAAACTGCAGCCGTTGAGGGTTTGGAGAGGGATTTGGTTGTTAAGGATGAGAAGTTGAATGAGGTTTCTGAGAGTTTAAGGAAGGAAGAGAGTGAGGGTTTGCAGTTGAAGGAGTTTGTTAATAATTTGGAATCAAAGATGGAATCGTTGAGGCCTTTGTTGATTGATCAGTTGAATTTTGTGTCTAAGATTCACAACCAGATTTGTAGTGTTTATAAGATCGTTGATGATGCAGGTTATTCCGAGCTTTCTGAGTCGTTGTTTGTGGCGCAAGAAACGGATATTGATGAGAATGTACGCGCCTCTTTGGCTGGGATGGAATCTATACATGAGTTGACTAGGATTGTTGTTCAAAAAGTTAGGGATTTGGTTGAGGAGAAGAATCGTGAGATCCAGAATTTAGATGAGACTGTGAATAGGTTAGTTAAGGAAAAGGATCAAATTGGTTCTTTGCTTAGGAGTGCTTTGTCAAAGAGGATGGCATCCAATCCGTCTTCAAATGAGTTGTTTTTAGCGGCAGAAAATGGGTTGAGGGAGGTTGGTATAGATTTCAAATTTAGTAAGATTCTTGGAGATGGAAAGCTTGCAGCTTCAAATGACAAGTCAAAAAAAACGGAAAAAGAAGAAGAGGATGAAATATACACTTTGGCTGGTGCTTTGGAGGATGTTGTTAAGGCATCTCAGCTTGAGATCATTGAGCTGCAGCACACTGTGAATGAATTAAGGGCAGAGTTGAGTTTACTTAAGCAGCACATAGAAGCCCAGGCCAAAGAACTCGACCATAGAATGCACCGGGTGGAGGAACTTGAAGAGAAGGAAAGAGTGGCAAATGAAAATAATGTATGTTTTGTCATGTGGTCATGGGCTGTGGGTAATTTGCGACAGGCATTTGGTGTCAATACTTTTCTATCTCTTAGAATCAATTGTCTCTTTATAATGCAGATTGAGGGGCTAATGATGGACATTGCGGCTGCTGAAGAAGAAATTAACAGATGGAAATTAGCAGCAGAGCAAGAAGCTGCTGCAGGCACAGGTGTTGAACAGCAATTTGTGGCACAGGTTGCTGTGCTTATCCCTTTCACTGCTCATCTCCAGCAAGGGATGAACACATTTTTCTGCAAAGCCCTTTCTTTTGAAGCTGCTAATGCATTTTCAGGCAGCATCTTAGCCTCTGCTGAGTTACTCCTTTCAGACTCAGTTCATAGTTCATACTCAAGGGCCCCTTTTTCCTTTGCTGCCACTTTCATTCTTGGTGGGGGTGTAAATGAGCTGAATGAGTTATTCAAGTATGGTTTCTTCCAAGCTAAAGCTCAAGCATGGTTTCTTCAAGCTCAATTGTCAACGCTCAAGCAGGAACTTGAAGAGGCAAAGCAATCCATGTTGGAATCTGAGAAGAAATTAAAATTCAAAGAAGAGACAGCAGCTGCTGCCATGGCAGCCAGAGATGCAGCAGAGAAATCTCTCAAGTTAGCAGACTTGAGGTCTTCTAGACTAAGGGACAGAGTGGAAGAGCTCACTCATCAGCTCGAAGAGTTTGAGAACAGAGAAGACTTGAGGGGCCGAAATAGGCCTAGATATGTATGCTGGCCATGGCAGTGGCTCGGCATGGACTTTGTTGGAATTCAGCAGCGGACTGATACGCAACAGCAAACGGCTTCTAACGAAATGGAGCTTTCCGAACCTCTCTTATAA
Protein sequence

>Msa0566750

MSGAGDLDADSVLSDVEDDGADPIPITSNSPSQDEVSVEKFREILAELDQEKQARIAAEKAKTELQTSFNRLKVLAQEAIRKRDEFGRLRDDAVREKEEATKLLEETARQLEESAKERQGLRSEIEKSSHMMVTGIEKISGKVNGFGGSGSALPRSQKYTGMAAVTYGVIKRANEIVEELLKQNDASVKARDQAREQIEQRNYEIAIEVSQLEATISDLRDEVAKKTAAVEGLERDLVVKDEKLNEVSESLRKEESEGLQLKEFVNNLESKMESLRPLLIDQLNFVSKIHNQICSVYKIVDDAGYSELSESLFVAQETDIDENVRASLAGMESIHELTRIVVQKVRDLVEEKNREIQNLDETVNRLVKEKDQIGSLLRSALSKRMASNPSSNELFLAAENGLREVGIDFKFSKILGDGKLAASNDKSKKTEKEEEDEIYTLAGALEDVVKASQLEIIELQHTVNELRAELSLLKQHIEAQAKELDHRMHRVEELEEKERVANENNVCFVMWSWAVGNLRQAFGVNTFLSLRINCLFIMQIEGLMMDIAAAEEEINRWKLAAEQEAAAGTGVEQQFVAQVAVLIPFTAHLQQGMNTFFCKALSFEAANAFSGSILASAELLLSDSVHSSYSRAPFSFAATFILGGGVNELNELFKYGFFQAKAQAWFLQAQLSTLKQELEEAKQSMLESEKKLKFKEETAAAAMAARDAAEKSLKLADLRSSRLRDRVEELTHQLEEFENREDLRGRNRPRYVCWPWQWLGMDFVGIQQRTDTQQQTASNEMELSEPLL*