AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0023150


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0023150 MtrunA17_Chr1g0176441 97.890 616 11 1 6 619 127 742 0.0 1233
Msa0023150 MtrunA17_Chr7g0267971 85.945 619 82 2 6 619 113 731 0.0 1067
Msa0023150 MtrunA17_Chr1g0176451 88.384 594 60 3 28 619 1 587 0.0 1063
Msa0023150 MtrunA17_Chr5g0408061 47.635 613 283 6 25 617 44 638 0.0 573
Msa0023150 MtrunA17_Chr1g0198931 47.528 627 281 11 24 619 72 681 0.0 553
Msa0023150 MtrunA17_Chr8g0359931 44.907 648 302 9 1 616 3 627 0.0 541
Msa0023150 MtrunA17_Chr1g0200651 42.368 642 304 8 25 617 44 668 3.39e-179 523
Msa0023150 MtrunA17_Chr3g0102731 47.985 546 251 8 25 549 54 587 8.80e-167 488
Msa0023150 MtrunA17_Chr5g0446901 46.679 557 261 8 18 549 57 602 2.13e-166 488
Msa0023150 MtrunA17_Chr2g0318061 47.880 401 176 5 26 418 1 376 2.54e-122 367
Msa0023150 MtrunA17_Chr7g0263351 31.773 598 362 12 25 588 82 667 6.65e-80 268
Msa0023150 MtrunA17_Chr1g0208391 30.741 553 340 14 25 563 70 593 1.17e-78 263
Msa0023150 MtrunA17_Chr1g0213091 30.606 611 365 9 25 588 73 671 1.74e-78 264
Msa0023150 MtrunA17_Chr4g0039261 30.420 572 368 12 5 560 8 565 3.61e-77 259
Msa0023150 MtrunA17_Chr4g0039251 31.150 565 357 12 36 581 79 630 3.04e-74 252
Msa0023150 MtrunA17_Chr4g0050291 30.084 595 378 14 1 579 1 573 5.72e-73 247
Msa0023150 MtrunA17_Chr4g0050251 30.118 591 373 18 6 579 27 594 1.07e-72 247
Msa0023150 MtrunA17_Chr6g0477811 30.619 565 356 12 28 578 47 589 2.51e-71 243
Msa0023150 MtrunA17_Chr4g0050261 29.968 624 372 21 6 579 27 635 2.12e-70 242
Msa0023150 MtrunA17_Chr2g0318071 47.137 227 104 2 406 616 7 233 5.13e-68 221
Msa0023150 MtrunA17_Chr8g0384391 31.104 598 364 18 48 614 54 634 2.72e-66 228
Msa0023150 MtrunA17_Chr3g0130331 30.378 609 352 20 48 614 56 634 1.42e-65 226
Msa0023150 MtrunA17_Chr2g0316301 29.195 596 353 14 48 613 71 627 8.19e-65 224
Msa0023150 MtrunA17_Chr0c20g0493841 29.125 594 373 14 2 576 806 1370 3.44e-64 229
Msa0023150 MtrunA17_Chr0c20g0493841 32.941 255 135 8 50 269 168 421 3.38e-35 142
Msa0023150 MtrunA17_Chr3g0104621 29.208 606 368 17 22 598 731 1304 3.02e-63 227
Msa0023150 MtrunA17_Chr3g0104621 27.122 542 329 14 50 548 56 574 4.96e-38 151
Msa0023150 MtrunA17_Chr4g0050221 29.061 554 349 16 46 582 27 553 8.05e-63 219
Msa0023150 MtrunA17_Chr7g0262261 29.256 605 388 14 22 606 770 1354 3.76e-62 224
Msa0023150 MtrunA17_Chr7g0262261 26.186 569 329 17 46 558 129 662 1.42e-42 165
Msa0023150 MtrunA17_Chr4g0065231 29.791 574 336 15 27 576 48 578 1.17e-60 213
Msa0023150 MtrunA17_Chr7g0262251 27.375 621 383 17 22 607 794 1381 5.03e-60 217
Msa0023150 MtrunA17_Chr7g0262251 26.816 537 348 17 46 558 171 686 3.70e-40 157
Msa0023150 MtrunA17_Chr8g0393191 42.205 263 147 2 28 285 43 305 7.63e-60 214
Msa0023150 MtrunA17_Chr7g0265991 25.521 576 361 13 22 562 26 568 2.65e-59 209
Msa0023150 MtrunA17_Chr7g0262241 28.196 571 358 15 12 560 836 1376 9.04e-59 213
Msa0023150 MtrunA17_Chr7g0262241 24.635 617 369 17 1 558 112 691 1.05e-37 150
Msa0023150 MtrunA17_Chr7g0262231 28.325 579 360 15 3 560 835 1379 3.19e-57 209
Msa0023150 MtrunA17_Chr7g0262231 24.691 567 346 14 43 558 155 691 1.09e-36 147
Msa0023150 MtrunA17_Chr5g0411621 43.911 271 142 4 24 285 17 286 3.28e-57 205
Msa0023150 MtrunA17_Chr1g0148811 28.264 605 381 19 22 607 821 1391 4.09e-57 209
Msa0023150 MtrunA17_Chr1g0148811 31.502 273 151 7 50 287 154 425 9.74e-29 122
Msa0023150 MtrunA17_Chr4g0026731 29.000 500 310 13 110 579 39 523 5.21e-57 202
Msa0023150 MtrunA17_Chr1g0148841 27.133 586 383 15 22 589 844 1403 8.15e-57 207
Msa0023150 MtrunA17_Chr1g0148841 25.000 548 338 16 50 550 166 687 1.78e-33 137
Msa0023150 MtrunA17_Chr2g0332211 26.142 635 406 18 5 613 889 1486 2.04e-56 206
Msa0023150 MtrunA17_Chr2g0332211 26.821 563 339 13 43 558 241 777 1.94e-46 177
Msa0023150 MtrunA17_Chr4g0003981 27.857 560 347 15 22 557 833 1359 9.94e-56 204
Msa0023150 MtrunA17_Chr4g0003981 25.303 577 367 13 1 534 123 678 1.90e-35 143
Msa0023150 MtrunA17_Chr7g0261951 27.911 627 396 17 10 613 834 1427 1.00e-55 204
Msa0023150 MtrunA17_Chr7g0261951 24.267 614 375 16 1 558 112 691 4.36e-37 148
Msa0023150 MtrunA17_Chr1g0171351 27.370 559 361 13 22 562 861 1392 1.50e-55 204
Msa0023150 MtrunA17_Chr1g0171351 25.177 564 343 19 50 562 176 711 2.51e-38 152
Msa0023150 MtrunA17_Chr8g0340651 28.055 581 373 13 22 584 872 1425 2.66e-55 203
Msa0023150 MtrunA17_Chr8g0340651 26.795 571 336 18 50 566 178 720 1.62e-43 168
Msa0023150 MtrunA17_Chr7g0265981 27.207 555 361 12 22 560 850 1377 3.65e-55 202
Msa0023150 MtrunA17_Chr7g0265981 25.265 566 354 16 43 562 177 719 1.83e-32 134
Msa0023150 MtrunA17_Chr2g0332221 26.115 628 415 18 5 613 805 1402 9.49e-55 201
Msa0023150 MtrunA17_Chr2g0332221 26.821 563 339 13 43 558 160 696 8.13e-46 175
Msa0023150 MtrunA17_Chr1g0198291 27.419 558 356 12 22 560 861 1388 1.25e-54 201
Msa0023150 MtrunA17_Chr1g0198291 27.392 533 321 17 50 541 189 696 2.41e-40 158
Msa0023150 MtrunA17_Chr7g0264441 29.720 535 325 11 1 509 246 755 2.20e-54 199
Msa0023150 MtrunA17_Chr7g0261971 27.129 634 402 17 3 613 827 1423 3.06e-54 200
Msa0023150 MtrunA17_Chr7g0261971 24.777 561 341 15 49 558 157 687 5.88e-35 142
Msa0023150 MtrunA17_Chr2g0332241 25.997 627 415 18 6 613 807 1403 9.60e-54 198
Msa0023150 MtrunA17_Chr2g0332241 27.094 561 340 12 43 558 160 696 1.51e-46 177
Msa0023150 MtrunA17_Chr3g0138261 26.475 627 404 16 1 606 816 1406 1.83e-53 197
Msa0023150 MtrunA17_Chr3g0138261 23.646 554 354 15 50 558 166 695 4.37e-38 151
Msa0023150 MtrunA17_Chr1g0199471 30.724 511 307 13 26 509 499 989 3.08e-53 197
Msa0023150 MtrunA17_Chr5g0429871 27.395 595 387 16 22 598 634 1201 4.83e-53 196
Msa0023150 MtrunA17_Chr5g0429871 26.471 510 310 13 92 558 21 508 1.27e-34 140
Msa0023150 MtrunA17_Chr2g0331081 27.509 578 372 13 22 580 858 1407 5.52e-53 196
Msa0023150 MtrunA17_Chr2g0331081 24.957 577 351 18 7 534 141 684 9.95e-38 150
Msa0023150 MtrunA17_Chr4g0062871 26.537 618 401 15 10 606 799 1384 1.30e-52 195
Msa0023150 MtrunA17_Chr4g0062871 25.182 548 353 14 50 558 150 679 2.15e-32 134
Msa0023150 MtrunA17_Chr4g0003971 27.044 636 391 17 12 607 782 1384 2.01e-52 194
Msa0023150 MtrunA17_Chr4g0003971 26.690 562 347 15 41 558 150 690 4.61e-39 154
Msa0023150 MtrunA17_Chr7g0262221 26.954 627 389 18 22 613 821 1413 3.95e-51 191
Msa0023150 MtrunA17_Chr7g0262221 25.254 590 365 17 1 550 113 666 8.05e-41 159
Msa0023150 MtrunA17_Chr1g0202431 26.797 612 364 17 40 615 40 603 8.54e-51 185
Msa0023150 MtrunA17_Chr7g0265971 26.034 580 350 14 22 560 842 1383 1.04e-50 189
Msa0023150 MtrunA17_Chr7g0265971 25.944 609 363 22 7 562 140 713 1.29e-40 159
Msa0023150 MtrunA17_Chr4g0039231 36.634 303 179 6 109 405 19 314 5.48e-50 184
Msa0023150 MtrunA17_Chr4g0028621 30.566 530 314 15 16 509 481 992 7.91e-50 186
Msa0023150 MtrunA17_Chr7g0265961 25.847 561 354 14 22 564 798 1314 1.00e-49 186
Msa0023150 MtrunA17_Chr7g0265961 25.933 563 340 18 50 562 182 717 1.89e-37 149
Msa0023150 MtrunA17_Chr4g0004021 29.487 468 273 14 22 466 830 1263 1.64e-48 183
Msa0023150 MtrunA17_Chr4g0004021 26.426 526 326 13 50 534 171 676 1.02e-36 147
Msa0023150 MtrunA17_Chr1g0180971 40.755 265 149 4 26 288 395 653 4.17e-47 177
Msa0023150 MtrunA17_Chr7g0261981 26.264 613 374 21 22 613 828 1383 2.22e-45 173
Msa0023150 MtrunA17_Chr7g0261981 24.065 615 375 16 1 558 112 691 1.47e-36 147
Msa0023150 MtrunA17_Chr7g0262321 28.427 496 284 16 24 494 537 986 1.86e-44 171
Msa0023150 MtrunA17_Chr7g0262321 40.870 115 67 1 156 269 24 138 4.25e-20 95.1
Msa0023150 MtrunA17_Chr2g0327241 24.020 612 423 16 27 613 106 700 1.56e-42 163
Msa0023150 MtrunA17_Chr3g0093331 38.636 220 130 4 70 285 18 236 4.72e-40 147
Msa0023150 MtrunA17_Chr4g0050201 27.924 419 276 9 110 521 22 421 7.16e-40 153
Msa0023150 MtrunA17_Chr4g0069211 36.000 250 151 4 2 244 794 1041 7.24e-38 150
Msa0023150 MtrunA17_Chr4g0069211 29.804 255 132 8 50 269 167 409 1.12e-27 119
Msa0023150 MtrunA17_Chr6g0472481 36.224 196 124 1 50 244 13 208 2.37e-36 137
Msa0023150 MtrunA17_Chr7g0266001 24.691 567 356 17 43 562 56 598 1.02e-35 143
Msa0023150 MtrunA17_Chr4g0047831 51.000 100 38 1 166 265 1 89 6.27e-26 102
Msa0023150 MtrunA17_Chr3g0123411 28.906 256 164 9 17 263 884 1130 7.57e-19 91.3
Msa0023150 MtrunA17_Chr3g0123411 29.832 238 154 8 28 260 242 471 1.84e-12 70.9
Msa0023150 MtrunA17_Chr1g0178481 32.906 234 130 11 28 252 380 595 3.77e-18 88.6
Msa0023150 MtrunA17_Chr7g0227391 27.273 242 150 11 28 260 425 649 5.34e-18 88.2
Msa0023150 MtrunA17_Chr6g0451911 32.558 215 131 10 50 259 1032 1237 1.89e-17 87.0
Msa0023150 MtrunA17_Chr6g0451911 31.250 240 152 8 2 235 328 560 6.47e-15 78.6
Msa0023150 MtrunA17_Chr5g0433051 33.488 215 128 10 47 256 478 682 2.74e-17 85.9
Msa0023150 MtrunA17_Chr3g0119381 33.175 211 124 8 32 235 398 598 6.59e-17 85.1
Msa0023150 MtrunA17_Chr3g0119381 29.870 231 140 9 17 235 1037 1257 7.94e-13 72.0
Msa0023150 MtrunA17_Chr7g0249091 27.004 237 140 7 47 260 97 323 8.87e-17 82.4
Msa0023150 MtrunA17_Chr6g0452041 33.673 196 119 7 44 235 372 560 1.18e-16 84.3
Msa0023150 MtrunA17_Chr6g0452041 33.023 215 121 11 50 251 1036 1240 2.67e-15 80.1
Msa0023150 MtrunA17_Chr6g0451881 30.568 229 146 8 44 268 372 591 1.81e-16 83.6
Msa0023150 MtrunA17_Chr6g0451881 33.023 215 121 11 50 251 1024 1228 3.95e-15 79.3
Msa0023150 MtrunA17_Chr6g0452171 31.301 246 146 11 50 284 1037 1270 2.31e-16 83.2
Msa0023150 MtrunA17_Chr6g0452171 30.131 229 147 8 44 268 372 591 6.39e-16 82.0
Msa0023150 MtrunA17_Chr6g0452081 33.520 179 108 7 61 235 51 222 2.39e-16 79.0
Msa0023150 MtrunA17_Chr5g0433071 33.023 215 129 10 47 256 480 684 2.76e-16 82.8
Msa0023150 MtrunA17_Chr7g0215001 22.716 405 238 13 197 560 1 371 2.86e-16 80.9
Msa0023150 MtrunA17_Chr6g0452111 33.163 196 120 7 44 235 379 567 2.89e-16 83.2
Msa0023150 MtrunA17_Chr6g0452111 31.707 246 145 11 50 284 1035 1268 5.91e-16 82.0
Msa0023150 MtrunA17_Chr4g0041871 27.155 232 156 9 33 260 1006 1228 2.95e-16 83.2
Msa0023150 MtrunA17_Chr4g0041871 29.952 207 132 8 61 263 371 568 1.70e-14 77.4
Msa0023150 MtrunA17_Chr7g0238421 25.098 255 145 8 59 311 13 223 3.11e-16 78.6
Msa0023150 MtrunA17_Chr6g0452061 30.453 243 152 11 50 284 546 779 4.11e-16 82.4
Msa0023150 MtrunA17_Chr6g0452071 34.081 223 121 12 50 256 230 442 6.03e-16 80.9
Msa0023150 MtrunA17_Chr7g0264631 30.705 241 143 10 26 260 426 648 7.26e-16 81.6
Msa0023150 MtrunA17_Chr7g0264631 27.854 219 133 9 58 266 1106 1309 7.59e-11 65.5
Msa0023150 MtrunA17_Chr5g0410921 31.132 212 130 9 28 235 356 555 8.11e-16 81.6
Msa0023150 MtrunA17_Chr5g0410921 30.841 214 135 8 50 259 1006 1210 9.45e-13 71.6
Msa0023150 MtrunA17_Chr6g0452141 33.182 220 127 12 50 256 1034 1246 8.12e-16 81.6
Msa0023150 MtrunA17_Chr6g0452141 33.163 196 120 7 44 235 373 561 7.36e-15 78.6
Msa0023150 MtrunA17_Chr4g0069221 23.669 338 220 9 250 576 5 315 9.47e-16 79.3
Msa0023150 MtrunA17_Chr1g0194031 29.032 217 143 8 47 260 398 606 1.19e-15 80.9
Msa0023150 MtrunA17_Chr5g0412741 30.047 213 127 9 58 260 481 681 1.29e-15 80.5
Msa0023150 MtrunA17_Chr8g0344651 26.910 301 181 13 19 296 580 864 1.56e-15 80.9
Msa0023150 MtrunA17_Chr1g0193991 29.358 218 141 8 47 260 403 611 1.64e-15 80.5
Msa0023150 MtrunA17_Chr1g0193991 29.130 230 143 10 17 235 1024 1244 3.85e-13 73.2
Msa0023150 MtrunA17_Chr4g0069411 28.458 253 162 9 17 260 376 618 1.67e-15 80.5
Msa0023150 MtrunA17_Chr4g0069411 28.638 213 135 9 28 235 1050 1250 6.63e-13 72.4
Msa0023150 MtrunA17_Chr1g0180601 30.417 240 145 9 26 260 399 621 1.71e-15 80.5
Msa0023150 MtrunA17_Chr1g0180601 26.556 241 135 10 17 235 1034 1254 9.28e-12 68.6
Msa0023150 MtrunA17_Chr4g0069361 29.098 244 146 9 32 264 377 604 1.75e-15 80.5
Msa0023150 MtrunA17_Chr4g0069361 31.351 185 113 8 57 235 1060 1236 2.68e-13 73.6
Msa0023150 MtrunA17_Chr4g0069351 31.019 216 134 9 50 260 395 600 1.89e-15 80.5
Msa0023150 MtrunA17_Chr4g0069351 30.729 192 119 8 50 235 1053 1236 1.72e-13 73.9
Msa0023150 MtrunA17_Chr3g0128381 26.749 243 156 10 27 259 389 619 2.33e-15 79.7
Msa0023150 MtrunA17_Chr3g0138211 28.085 235 152 9 32 260 395 618 4.15e-15 79.3
Msa0023150 MtrunA17_Chr3g0138211 29.224 219 134 9 22 235 1036 1238 2.10e-11 67.4
Msa0023150 MtrunA17_Chr4g0069401 29.907 214 139 8 50 260 390 595 4.36e-15 79.3
Msa0023150 MtrunA17_Chr4g0069401 27.679 224 146 9 21 235 1018 1234 8.04e-13 72.0
Msa0023150 MtrunA17_Chr4g0061601 31.414 191 119 8 50 235 404 587 4.97e-15 78.6
Msa0023150 MtrunA17_Chr7g0233901 29.864 221 139 11 50 263 1012 1223 8.75e-15 78.2
Msa0023150 MtrunA17_Chr7g0233901 27.668 253 170 8 15 263 339 582 2.16e-14 77.0
Msa0023150 MtrunA17_Chr7g0257341 27.619 210 139 5 51 258 573 771 1.02e-14 78.2
Msa0023150 MtrunA17_Chr7g0257341 29.592 196 120 8 45 231 1468 1654 2.39e-12 70.5
Msa0023150 MtrunA17_Chr6g0474071 31.818 220 123 11 49 256 229 433 1.18e-14 76.6
Msa0023150 MtrunA17_Chr1g0212701 26.984 252 171 8 12 260 380 621 2.61e-14 76.6
Msa0023150 MtrunA17_Chr1g0194001 29.258 229 144 9 17 235 127 347 2.95e-14 74.7
Msa0023150 MtrunA17_Chr4g0039821 30.000 190 109 8 57 235 1058 1234 3.81e-14 76.3
Msa0023150 MtrunA17_Chr4g0039821 29.954 217 135 9 50 260 393 598 5.28e-14 75.9
Msa0023150 MtrunA17_Chr7g0222781 25.839 298 187 11 32 317 405 680 8.63e-14 75.1
Msa0023150 MtrunA17_Chr1g0156821 27.311 238 157 8 28 262 994 1218 1.22e-13 74.7
Msa0023150 MtrunA17_Chr2g0285191 31.343 201 126 6 32 227 397 590 1.89e-13 73.9
Msa0023150 MtrunA17_Chr6g0481921 29.864 221 139 10 49 263 287 497 1.93e-13 73.9
Msa0023150 MtrunA17_Chr2g0285301 28.505 214 142 8 50 260 381 586 5.04e-13 72.8
Msa0023150 MtrunA17_Chr8g0390471 37.755 98 60 1 50 146 5 102 1.05e-12 65.1
Msa0023150 MtrunA17_Chr4g0060421 27.419 186 107 9 57 231 159 327 2.72e-12 69.3
Msa0023150 MtrunA17_Chr2g0285311 32.240 183 112 6 50 227 386 561 3.01e-12 70.1
Msa0023150 MtrunA17_Chr3g0102741 37.209 86 38 1 546 615 2 87 4.55e-12 62.4
Msa0023150 MtrunA17_Chr6g0486841 28.378 222 144 9 44 260 370 581 7.06e-12 68.9
Msa0023150 MtrunA17_Chr3g0132711 26.368 201 133 6 62 258 221 410 1.09e-11 67.8
Msa0023150 MtrunA17_Chr4g0060501 25.238 210 138 8 57 260 639 835 1.15e-11 68.2
Msa0023150 MtrunA17_Chr4g0047821 50.877 57 28 0 31 87 31 87 1.40e-11 61.2
Msa0023150 MtrunA17_Chr4g0026741 43.038 79 43 1 7 85 28 104 2.08e-11 62.0
Msa0023150 MtrunA17_Chr3g0093041 25.316 237 150 7 62 294 207 420 4.05e-11 65.9
Msa0023150 MtrunA17_Chr6g0453051 30.726 179 113 7 61 235 391 562 4.31e-11 66.2
Msa0023150 MtrunA17_Chr4g0060471 25.731 171 111 8 66 231 1 160 8.05e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0023150 AT5G06530.2 81.301 615 112 2 6 618 136 749 0.0 1041
Msa0023150 AT5G06530.1 81.301 615 112 2 6 618 136 749 0.0 1041
Msa0023150 AT5G06530.3 81.149 557 102 2 6 560 136 691 0.0 936
Msa0023150 AT5G06530.4 81.855 496 88 1 67 560 1 496 0.0 849
Msa0023150 AT1G31770.1 48.142 619 277 9 25 619 50 648 0.0 573
Msa0023150 AT4G27420.1 48.571 630 263 9 21 616 30 632 0.0 562
Msa0023150 AT3G13220.1 46.093 627 292 7 25 615 62 678 0.0 555
Msa0023150 AT1G71960.1 44.444 648 282 9 25 617 37 661 0.0 531
Msa0023150 AT3G25620.2 46.699 621 291 11 24 616 64 672 0.0 528
Msa0023150 AT3G25620.1 46.437 407 193 9 25 418 65 459 1.56e-112 345
Msa0023150 AT2G01320.8 31.720 599 365 15 25 604 67 640 2.47e-87 285
Msa0023150 AT2G01320.5 31.720 599 365 15 25 604 67 640 2.47e-87 285
Msa0023150 AT2G01320.3 32.605 549 335 13 25 563 67 590 4.17e-86 284
Msa0023150 AT2G01320.1 32.721 544 331 13 25 558 67 585 4.21e-86 284
Msa0023150 AT2G01320.4 32.721 544 331 13 25 558 67 585 4.21e-86 284
Msa0023150 AT2G01320.2 32.605 549 335 13 25 563 67 590 4.73e-86 284
Msa0023150 AT2G37360.1 32.479 585 350 12 25 580 95 663 6.59e-84 279
Msa0023150 AT2G01320.7 33.404 473 286 10 25 491 67 516 2.74e-80 263
Msa0023150 AT2G01320.6 33.404 473 286 10 25 491 67 516 2.74e-80 263
Msa0023150 AT3G55110.1 31.597 595 376 13 25 602 60 640 5.33e-79 265
Msa0023150 AT3G53510.1 33.750 560 325 10 48 588 124 656 5.64e-79 265
Msa0023150 AT3G55090.1 30.936 598 365 11 25 588 70 653 1.61e-78 264
Msa0023150 AT5G13580.1 31.908 608 342 12 25 588 65 644 8.16e-77 259
Msa0023150 AT3G55100.1 29.879 579 356 10 22 577 16 567 1.67e-76 257
Msa0023150 AT3G55100.2 29.879 579 356 10 22 577 16 567 1.67e-76 257
Msa0023150 AT3G55130.1 31.029 593 360 16 25 588 70 642 1.89e-76 258
Msa0023150 AT2G39350.1 30.407 615 385 9 23 598 62 672 8.14e-75 254
Msa0023150 AT3G21090.1 29.734 639 392 19 13 614 10 628 4.84e-74 251
Msa0023150 AT4G15236.1 29.716 599 375 12 22 607 792 1357 1.35e-72 254
Msa0023150 AT4G15236.1 30.769 299 168 10 24 285 126 422 9.50e-33 135
Msa0023150 AT2G13610.1 31.360 625 372 16 19 614 40 636 3.25e-72 245
Msa0023150 AT1G17840.1 30.017 573 377 11 15 578 35 592 3.11e-71 243
Msa0023150 AT4G15233.3 29.421 605 369 14 22 607 732 1297 5.77e-71 249
Msa0023150 AT4G15233.3 31.915 282 152 10 42 285 83 362 2.29e-32 134
Msa0023150 AT4G15233.6 29.421 605 369 14 22 607 732 1297 5.77e-71 249
Msa0023150 AT4G15233.6 31.915 282 152 10 42 285 83 362 2.29e-32 134
Msa0023150 AT4G15233.1 29.421 605 369 14 22 607 794 1359 7.34e-71 249
Msa0023150 AT4G15233.1 31.915 282 152 10 42 285 145 424 2.54e-32 134
Msa0023150 AT4G15233.8 29.421 605 369 14 22 607 785 1350 8.21e-71 249
Msa0023150 AT4G15233.8 30.851 282 146 11 42 285 145 415 4.83e-28 120
Msa0023150 AT4G15233.7 29.421 605 369 14 22 607 776 1341 8.66e-71 249
Msa0023150 AT4G15233.7 33.712 264 153 10 42 285 145 406 3.95e-34 139
Msa0023150 AT2G37280.4 29.605 608 370 15 22 606 649 1221 7.45e-70 246
Msa0023150 AT2G37280.4 23.340 527 329 17 66 544 12 511 2.08e-27 119
Msa0023150 AT2G37280.1 29.605 608 370 15 22 606 807 1379 1.17e-69 246
Msa0023150 AT2G37280.1 23.784 555 347 18 39 544 142 669 7.83e-32 132
Msa0023150 AT1G51500.1 29.963 534 343 12 28 547 24 540 1.39e-69 239
Msa0023150 AT2G37280.3 29.605 608 370 15 22 606 836 1408 1.67e-69 246
Msa0023150 AT2G37280.3 22.774 584 346 18 39 544 142 698 2.67e-29 124
Msa0023150 AT1G51460.1 28.997 638 396 17 20 614 2 625 3.02e-69 238
Msa0023150 AT4G15233.2 29.610 564 339 13 22 563 794 1321 4.38e-69 244
Msa0023150 AT4G15233.2 31.915 282 152 10 42 285 145 424 2.85e-32 134
Msa0023150 AT4G15230.3 28.830 607 388 14 12 606 792 1366 3.63e-67 239
Msa0023150 AT4G15230.3 24.821 560 349 15 50 562 156 690 5.59e-40 157
Msa0023150 AT4G15230.1 28.830 607 388 14 12 606 792 1366 3.63e-67 239
Msa0023150 AT4G15230.1 24.821 560 349 15 50 562 156 690 5.59e-40 157
Msa0023150 AT4G15230.4 28.830 607 388 14 12 606 713 1287 4.76e-67 238
Msa0023150 AT4G15230.4 24.821 560 349 15 50 562 77 611 7.85e-40 157
Msa0023150 AT2G37280.2 30.545 550 329 13 22 550 807 1324 1.91e-66 236
Msa0023150 AT2G37280.2 23.784 555 347 18 39 544 142 669 7.84e-32 132
Msa0023150 AT3G53480.1 28.171 607 380 15 22 606 844 1416 3.73e-66 236
Msa0023150 AT3G53480.1 24.377 562 369 14 37 560 175 718 4.45e-35 142
Msa0023150 AT4G15215.8 28.805 611 389 12 9 606 776 1353 7.74e-66 235
Msa0023150 AT4G15215.8 24.368 554 352 16 50 562 150 677 2.96e-36 146
Msa0023150 AT4G15215.10 28.805 611 389 12 9 606 776 1353 7.74e-66 235
Msa0023150 AT4G15215.10 24.368 554 352 16 50 562 150 677 2.96e-36 146
Msa0023150 AT4G15215.6 28.805 611 389 12 9 606 776 1353 7.74e-66 235
Msa0023150 AT4G15215.6 24.368 554 352 16 50 562 150 677 2.96e-36 146
Msa0023150 AT4G15215.7 28.805 611 389 12 9 606 776 1353 7.74e-66 235
Msa0023150 AT4G15215.7 24.368 554 352 16 50 562 150 677 2.96e-36 146
Msa0023150 AT4G15215.11 28.805 611 389 12 9 606 786 1363 8.10e-66 234
Msa0023150 AT4G15215.11 25.045 555 354 17 50 562 153 687 7.04e-39 154
Msa0023150 AT4G15215.9 28.805 611 389 12 9 606 783 1360 8.31e-66 234
Msa0023150 AT4G15215.9 25.045 555 354 17 50 562 150 684 6.37e-39 154
Msa0023150 AT4G15215.4 28.805 611 389 12 9 606 783 1360 8.31e-66 234
Msa0023150 AT4G15215.4 25.045 555 354 17 50 562 150 684 6.37e-39 154
Msa0023150 AT4G15215.5 28.805 611 389 12 9 606 783 1360 8.31e-66 234
Msa0023150 AT4G15215.5 25.045 555 354 17 50 562 150 684 6.37e-39 154
Msa0023150 AT4G15215.3 28.805 611 389 12 9 606 783 1360 8.31e-66 234
Msa0023150 AT4G15215.3 25.045 555 354 17 50 562 150 684 6.37e-39 154
Msa0023150 AT4G15215.2 28.805 611 389 12 9 606 783 1360 8.31e-66 234
Msa0023150 AT4G15215.2 25.045 555 354 17 50 562 150 684 6.37e-39 154
Msa0023150 AT4G15215.1 28.805 611 389 12 9 606 779 1356 8.68e-66 234
Msa0023150 AT4G15215.1 24.368 554 352 16 50 562 153 680 3.85e-36 145
Msa0023150 AT4G15233.5 29.340 576 352 13 51 607 677 1216 2.54e-65 233
Msa0023150 AT4G15233.5 33.712 264 153 10 42 285 83 344 2.66e-34 140
Msa0023150 AT4G15233.4 29.340 576 352 13 51 607 677 1216 2.54e-65 233
Msa0023150 AT4G15233.4 33.712 264 153 10 42 285 83 344 2.66e-34 140
Msa0023150 AT1G59870.1 30.576 556 341 14 22 560 861 1388 1.48e-63 228
Msa0023150 AT1G59870.1 26.855 566 331 18 50 562 186 721 1.06e-38 154
Msa0023150 AT1G53270.1 29.520 542 337 12 42 577 42 544 7.63e-63 218
Msa0023150 AT4G15230.2 28.962 549 351 12 12 550 792 1311 1.16e-62 225
Msa0023150 AT4G15230.2 24.821 560 349 15 50 562 156 690 5.72e-40 157
Msa0023150 AT2G29940.1 28.974 604 379 15 22 606 820 1392 5.98e-62 223
Msa0023150 AT2G29940.1 28.214 599 353 19 7 558 137 705 1.02e-44 172
Msa0023150 AT1G15210.1 29.522 586 352 15 6 560 806 1361 1.94e-59 216
Msa0023150 AT1G15210.1 25.357 560 347 16 50 562 184 719 1.32e-38 153
Msa0023150 AT3G16340.2 29.676 556 346 13 22 560 803 1330 2.28e-59 216
Msa0023150 AT3G16340.2 24.879 619 388 17 1 571 112 701 7.41e-38 151
Msa0023150 AT3G16340.1 30.179 560 338 15 22 560 808 1335 2.31e-59 216
Msa0023150 AT3G16340.1 25.323 620 389 18 1 571 112 706 4.69e-40 157
Msa0023150 AT5G19410.1 29.401 551 333 14 27 570 51 552 7.22e-59 208
Msa0023150 AT5G19410.2 29.401 551 333 14 27 570 60 561 9.60e-59 208
Msa0023150 AT1G15520.1 26.324 623 396 17 8 606 806 1389 4.34e-58 212
Msa0023150 AT1G15520.1 25.494 557 340 17 50 558 169 698 9.55e-40 157
Msa0023150 AT2G36380.1 27.549 559 360 13 22 562 846 1377 3.30e-57 209
Msa0023150 AT2G36380.1 24.955 553 360 14 49 562 187 723 4.10e-39 155
Msa0023150 AT4G25750.1 28.464 534 323 14 42 570 22 501 5.89e-56 199
Msa0023150 AT1G66950.1 27.076 554 359 13 22 557 847 1373 6.15e-56 206
Msa0023150 AT1G66950.1 25.222 563 344 19 50 562 190 725 1.32e-35 144
Msa0023150 AT2G26910.1 28.454 608 379 17 22 606 812 1386 4.36e-55 203
Msa0023150 AT2G26910.1 26.486 555 337 17 50 558 150 679 1.94e-37 150
Msa0023150 AT2G28070.2 27.154 615 402 17 27 614 113 708 1.95e-53 195
Msa0023150 AT2G28070.1 27.154 615 402 17 27 614 113 708 1.95e-53 195
Msa0023150 AT3G30842.1 27.018 607 386 16 22 607 815 1385 2.62e-53 197
Msa0023150 AT3G30842.1 27.094 561 336 19 50 562 161 696 7.40e-44 169
Msa0023150 AT2G37010.2 29.480 519 315 14 17 509 475 968 5.06e-52 193
Msa0023150 AT2G37010.1 29.480 519 315 14 17 509 475 968 5.06e-52 193
Msa0023150 AT1G53390.1 30.518 521 309 16 19 509 498 995 2.98e-51 191
Msa0023150 AT5G52860.1 27.675 542 299 18 50 570 44 513 3.95e-50 183
Msa0023150 AT1G15520.2 28.067 481 290 13 8 466 806 1252 2.83e-49 186
Msa0023150 AT1G15520.2 25.494 557 340 17 50 558 169 698 7.20e-40 157
Msa0023150 AT5G60740.1 30.368 517 309 13 26 509 497 995 1.68e-46 177
Msa0023150 AT1G10680.2 32.906 234 142 9 32 260 360 583 4.19e-20 95.9
Msa0023150 AT1G10680.2 34.868 152 89 6 58 205 1007 1152 5.38e-11 66.6
Msa0023150 AT1G10680.1 32.906 234 142 9 32 260 360 583 5.78e-20 95.5
Msa0023150 AT1G10680.1 32.967 182 111 7 58 235 1007 1181 2.42e-12 70.9
Msa0023150 AT4G25960.1 29.661 236 144 10 28 257 401 620 3.57e-18 89.7
Msa0023150 AT4G25960.1 32.597 181 113 6 58 235 1055 1229 1.04e-12 72.0
Msa0023150 AT1G27940.2 28.519 270 168 11 7 260 752 1012 4.40e-17 85.9
Msa0023150 AT1G27940.2 27.731 238 137 8 50 270 174 393 2.32e-15 80.5
Msa0023150 AT1G27940.1 28.519 270 168 11 7 260 966 1226 4.65e-17 85.9
Msa0023150 AT1G27940.1 27.801 241 133 9 50 270 388 607 2.97e-15 80.1
Msa0023150 AT3G62150.3 30.275 218 139 8 47 260 417 625 4.68e-17 85.9
Msa0023150 AT3G62150.3 31.553 206 127 9 57 257 1076 1272 1.70e-14 77.8
Msa0023150 AT3G62150.2 30.275 218 139 8 47 260 417 625 4.68e-17 85.9
Msa0023150 AT3G62150.2 31.553 206 127 9 57 257 1076 1272 1.70e-14 77.8
Msa0023150 AT3G62150.1 30.275 218 139 8 47 260 417 625 4.68e-17 85.9
Msa0023150 AT3G62150.1 31.553 206 127 9 57 257 1076 1272 1.70e-14 77.8
Msa0023150 AT1G70610.1 27.500 240 153 9 28 260 455 680 4.90e-17 85.5
Msa0023150 AT1G70610.2 27.500 240 153 9 28 260 274 499 5.00e-17 85.1
Msa0023150 AT5G58270.1 30.242 248 154 10 19 260 465 699 3.66e-16 82.8
Msa0023150 AT3G47750.1 25.075 335 182 10 36 357 621 899 3.80e-16 82.8
Msa0023150 AT5G39040.1 34.031 191 114 8 50 235 413 596 4.35e-16 82.4
Msa0023150 AT3G28415.2 29.661 236 153 8 32 263 345 571 4.60e-16 82.8
Msa0023150 AT3G28415.2 31.651 218 130 12 50 259 1001 1207 4.25e-15 79.7
Msa0023150 AT3G28415.1 29.661 236 153 8 32 263 337 563 5.89e-16 82.4
Msa0023150 AT3G28415.1 31.651 218 130 12 50 259 993 1199 5.35e-15 79.3
Msa0023150 AT3G28345.1 30.317 221 141 8 47 263 373 584 6.51e-16 82.4
Msa0023150 AT3G28345.1 30.516 213 139 8 50 259 1012 1218 5.83e-13 72.8
Msa0023150 AT2G36910.1 28.322 286 180 11 26 305 368 634 1.34e-15 81.3
Msa0023150 AT2G36910.1 27.386 241 133 10 17 235 1003 1223 6.03e-12 69.7
Msa0023150 AT3G47790.1 26.383 235 146 7 36 260 592 809 1.72e-15 80.9
Msa0023150 AT1G02520.1 28.936 235 150 9 32 260 380 603 2.63e-15 80.5
Msa0023150 AT1G02520.1 28.796 191 112 8 57 235 1056 1234 9.01e-12 68.9
Msa0023150 AT1G02520.2 28.936 235 150 9 32 260 380 603 2.63e-15 80.5
Msa0023150 AT1G02520.2 28.796 191 112 8 57 235 1056 1234 9.01e-12 68.9
Msa0023150 AT1G02520.3 28.936 235 150 9 32 260 380 603 2.63e-15 80.5
Msa0023150 AT1G02520.3 28.796 191 112 8 57 235 1056 1234 9.01e-12 68.9
Msa0023150 AT5G61700.2 26.263 198 137 3 36 231 601 791 2.67e-15 80.1
Msa0023150 AT5G61700.4 26.263 198 137 3 36 231 601 791 2.67e-15 80.1
Msa0023150 AT3G28390.1 29.464 224 145 8 44 263 358 572 2.76e-15 80.5
Msa0023150 AT3G28390.1 30.698 215 136 10 50 259 997 1203 1.40e-14 78.2
Msa0023150 AT1G02530.1 28.253 269 170 11 32 289 367 623 3.78e-15 80.1
Msa0023150 AT1G02530.1 29.319 191 111 8 57 235 1051 1229 1.05e-11 68.9
Msa0023150 AT1G02530.2 28.253 269 170 11 32 289 367 623 3.82e-15 79.7
Msa0023150 AT3G28380.1 29.344 259 166 11 44 298 370 615 4.85e-15 79.7
Msa0023150 AT3G28380.1 30.137 219 140 11 50 263 1012 1222 1.94e-14 77.8
Msa0023150 AT1G28010.1 29.740 269 166 12 7 260 968 1228 5.03e-15 79.3
Msa0023150 AT1G28010.1 27.311 238 138 8 50 270 389 608 1.27e-14 78.2
Msa0023150 AT2G47000.4 27.155 232 158 8 32 260 383 606 5.53e-15 79.3
Msa0023150 AT5G61700.1 25.991 227 157 5 36 260 601 818 8.29e-15 78.6
Msa0023150 AT4G25450.3 31.222 221 129 11 50 260 318 525 8.40e-15 78.2
Msa0023150 AT2G47000.2 27.155 232 158 8 32 260 383 606 8.78e-15 78.6
Msa0023150 AT2G47000.3 27.155 232 158 8 32 260 383 606 9.52e-15 78.6
Msa0023150 AT2G47000.7 27.155 232 158 8 32 260 383 606 9.52e-15 78.6
Msa0023150 AT2G47000.6 27.155 232 158 8 32 260 383 606 9.77e-15 78.6
Msa0023150 AT2G47000.6 29.612 206 131 9 57 257 1066 1262 1.07e-13 75.1
Msa0023150 AT2G47000.5 27.155 232 158 8 32 260 383 606 9.77e-15 78.6
Msa0023150 AT2G47000.5 29.612 206 131 9 57 257 1066 1262 1.07e-13 75.1
Msa0023150 AT2G47000.1 27.155 232 158 8 32 260 383 606 9.77e-15 78.6
Msa0023150 AT2G47000.1 29.612 206 131 9 57 257 1066 1262 1.07e-13 75.1
Msa0023150 AT4G25450.1 30.769 221 130 10 50 260 487 694 1.03e-14 78.2
Msa0023150 AT3G47770.1 23.794 311 172 9 36 338 590 843 1.11e-14 78.2
Msa0023150 AT3G47790.2 26.961 204 124 6 36 229 473 661 1.69e-14 77.4
Msa0023150 AT3G47770.2 23.794 311 172 9 36 338 616 869 1.81e-14 77.4
Msa0023150 AT3G47790.3 26.961 204 124 6 36 229 592 780 1.83e-14 77.4
Msa0023150 AT3G47740.1 23.123 333 173 10 36 348 616 885 2.31e-14 77.0
Msa0023150 AT3G28360.1 29.204 226 143 9 44 263 357 571 3.07e-14 77.0
Msa0023150 AT3G28360.1 32.075 212 131 11 50 256 998 1201 8.48e-14 75.5
Msa0023150 AT4G28620.1 28.704 216 137 8 47 256 451 655 3.16e-14 76.6
Msa0023150 AT3G47780.1 24.359 312 169 9 36 338 619 872 3.16e-14 76.6
Msa0023150 AT4G28630.1 28.704 216 137 7 47 256 449 653 4.43e-14 75.9
Msa0023150 AT2G41700.2 29.936 157 99 4 51 205 498 645 5.29e-14 76.3
Msa0023150 AT2G41700.2 28.000 200 131 7 36 231 1417 1607 8.58e-13 72.4
Msa0023150 AT2G41700.1 29.936 157 99 4 51 205 568 715 5.54e-14 76.3
Msa0023150 AT2G41700.1 29.609 179 113 7 57 231 1480 1649 9.14e-13 72.4
Msa0023150 AT4G18050.1 30.180 222 128 8 50 260 372 577 7.03e-14 75.9
Msa0023150 AT5G61690.2 25.862 232 151 7 34 258 531 748 7.63e-14 75.5
Msa0023150 AT4G18050.2 30.180 222 128 8 50 260 382 587 7.75e-14 75.9
Msa0023150 AT5G61740.3 23.301 309 176 7 36 338 454 707 8.08e-14 75.5
Msa0023150 AT5G61740.2 23.301 309 176 7 36 338 559 812 9.89e-14 75.1
Msa0023150 AT5G61740.1 23.301 309 176 7 36 338 593 846 1.06e-13 75.1
Msa0023150 AT1G65410.1 25.738 237 143 9 47 260 96 322 1.49e-13 72.8
Msa0023150 AT3G47730.1 26.977 215 136 8 51 258 547 747 1.50e-13 74.7
Msa0023150 AT5G46540.1 34.503 171 97 8 50 214 374 535 1.53e-13 74.7
Msa0023150 AT3G55320.1 27.778 234 153 8 32 260 413 635 2.89e-13 73.9
Msa0023150 AT5G61690.1 25.652 230 153 7 34 258 531 747 2.95e-13 73.6
Msa0023150 AT5G61730.1 25.431 232 152 7 34 258 522 739 3.03e-13 73.6
Msa0023150 AT4G01820.2 28.704 216 143 8 48 260 363 570 3.14e-13 73.6
Msa0023150 AT5G03910.1 28.054 221 134 7 50 259 412 618 3.34e-13 73.2
Msa0023150 AT5G61730.2 25.431 232 152 7 34 258 532 749 3.72e-13 73.2
Msa0023150 AT4G01820.1 28.704 216 143 8 48 260 363 570 5.20e-13 73.2
Msa0023150 AT4G01820.1 28.962 183 121 6 57 235 1008 1185 4.51e-11 66.6
Msa0023150 AT4G01830.1 28.311 219 142 8 47 260 367 575 5.38e-13 72.8
Msa0023150 AT4G01830.1 29.319 191 110 8 57 235 1009 1186 2.22e-12 70.9
Msa0023150 AT4G01830.2 28.311 219 142 8 47 260 133 341 5.78e-13 72.8
Msa0023150 AT4G01830.2 29.319 191 110 8 57 235 775 952 2.39e-12 70.9
Msa0023150 AT3G28860.1 28.293 205 132 8 61 260 393 587 9.11e-12 68.9

Find 157 sgRNAs with CRISPR-Local

Find 311 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCTGATCTTGCAGATCTTT+TGG 0.163290 1_1:-44103197 None:intergenic
TTATCCACTGCAATCATCTT+AGG 0.173384 1_1:+44103143 Msa0023150:CDS
TCTCCTTGTTGTTTACTTCA+TGG 0.193825 1_1:+44103651 Msa0023150:CDS
TGTGTTCTGGGGATTCTTTC+CGG 0.199466 1_1:+44103486 Msa0023150:CDS
TTTGACAAGTTGATCCTTCT+TGG 0.244718 1_1:+44101957 Msa0023150:CDS
AGTAAGAATGGTGAGGAAAA+AGG 0.245082 1_1:-44103698 None:intergenic
AAGTCCCAATATTCATTTCT+TGG 0.258096 1_1:+44104202 Msa0023150:CDS
TGCTCCTTAGTTAATGTCTT+TGG 0.266546 1_1:-44101238 None:intergenic
CATCTCACACCTGTCGTAAA+TGG 0.267573 1_1:+44104285 Msa0023150:CDS
TGCTATCGGTGCTACGCTTA+TGG 0.280827 1_1:+44104026 Msa0023150:CDS
CATTATAATTGCCTTGTATA+GGG 0.286780 1_1:+44100052 None:intergenic
TCATTATAATTGCCTTGTAT+AGG 0.298284 1_1:+44100051 None:intergenic
CATATTATTGCTGTCAAATT+CGG 0.308693 1_1:-44104811 None:intergenic
TTTCTTTATTGCTGTGTTCT+GGG 0.318308 1_1:+44103474 Msa0023150:CDS
CGGATCCAAGAAATGAATAT+TGG 0.321371 1_1:-44104207 None:intergenic
CGAATTTGACAGCAATAATA+TGG 0.329576 1_1:+44104812 Msa0023150:three_prime_UTR
CTTTATCCTTGCCCTTGTTC+CGG 0.346115 1_1:-44100133 None:intergenic
TGTAAATCCAGGTGAAGTTT+TGG 0.346664 1_1:+44100819 Msa0023150:CDS
TGATGAACCAACATCTGGTT+TGG 0.348793 1_1:+44101521 Msa0023150:CDS
GTAACTGCTATAGTTGGAAT+AGG 0.358310 1_1:+44104709 Msa0023150:three_prime_UTR
AAAGGAAGTTTGCTTTACTT+TGG 0.364397 1_1:+44101981 Msa0023150:CDS
GCCTTTGAGTACTACCTTGT+AGG 0.365137 1_1:-44100749 None:intergenic
CTGATTGCGATGCAGGGTCT+TGG 0.374039 1_1:+44104000 Msa0023150:intron
GCAGCAGTTGAAACATATAA+TGG 0.375864 1_1:+44102152 Msa0023150:CDS
TGAGAAACTTGGAATATGAT+TGG 0.378692 1_1:-44100942 None:intergenic
CTTGTTGTTTACTTCATGGC+TGG 0.382351 1_1:+44103655 Msa0023150:CDS
GATTCCTCTCCAGAAAAGTA+TGG 0.391604 1_1:-44103072 None:intergenic
TGTAACTGCTATAGTGGAAT+AGG 0.395504 1_1:+44104748 Msa0023150:three_prime_UTR
TTTCTTGATGAACCAACATC+TGG 0.396446 1_1:+44101516 Msa0023150:CDS
TTGACAAGTTGATCCTTCTT+GGG 0.396710 1_1:+44101958 Msa0023150:CDS
CCTCTGCATCATTGCAGCTC+AGG 0.398239 1_1:+44103726 Msa0023150:CDS
GAAAGAGCACCGGTAATATC+AGG 0.403085 1_1:-44103630 None:intergenic
TATAGTGGAATAGGTTAATC+TGG 0.406474 1_1:+44104757 Msa0023150:three_prime_UTR
GCTATAGTTGGAATAGGTTA+AGG 0.411961 1_1:+44104715 Msa0023150:three_prime_UTR
TTAATGTCTCTTTCACAGTT+AGG 0.413046 1_1:-44101192 None:intergenic
ACCTCTAGATGAAGATTTGA+AGG 0.415322 1_1:+44102995 Msa0023150:CDS
TCCATTAGACCTGATATTAC+CGG 0.417167 1_1:+44103621 Msa0023150:CDS
CTTGAAAAGAGCAACAACTT+TGG 0.420678 1_1:+44104050 Msa0023150:CDS
GACATTAACTAAGGAGCAAA+AGG 0.429040 1_1:+44101243 Msa0023150:CDS
GAGAGGAAGAGAGTTTGTAT+TGG 0.429303 1_1:+44101462 Msa0023150:CDS
ATGGATTACTTCCAATCTAT+AGG 0.431732 1_1:+44102020 Msa0023150:CDS
AATGCTTGTTAGCATTAGTA+AGG 0.432335 1_1:+44104506 Msa0023150:three_prime_UTR
TGGAAAAGCATCAGAATCAA+TGG 0.437688 1_1:+44102001 Msa0023150:CDS
TTGTGAAACAGTCTACTTGA+TGG 0.442523 1_1:-44101933 None:intergenic
GGATCCAAGAAATGAATATT+GGG 0.448204 1_1:-44104206 None:intergenic
ATGCTAACAAGCATTTCAAT+TGG 0.449102 1_1:-44104498 None:intergenic
TCATTTGTTCGCGGAGTATC+CGG 0.449193 1_1:+44101435 Msa0023150:CDS
GAGGAGAAGGATATCTTGAA+TGG 0.451796 1_1:+44100784 Msa0023150:CDS
ACCGGTAATATCAGGTCTAA+TGG 0.454331 1_1:-44103622 None:intergenic
AGCTTTGTAACTGCTATAGT+TGG 0.456222 1_1:+44104703 Msa0023150:three_prime_UTR
TATCCACTGCAATCATCTTA+GGG 0.456788 1_1:+44103144 Msa0023150:CDS
TTCTGTACCGTCGGAGTTGG+AGG 0.462568 1_1:+44102115 Msa0023150:CDS
AAGATCTGTAACTGCTATAG+TGG 0.464139 1_1:+44104742 Msa0023150:three_prime_UTR
CCCAAAAGATCTGCAAGATC+AGG 0.464297 1_1:+44103196 Msa0023150:CDS
TTTAAACGAACTTCAAAAGC+AGG 0.464734 1_1:+44104463 Msa0023150:three_prime_UTR
AAGAGCAACAACTTTGGCTT+CGG 0.468958 1_1:+44104056 Msa0023150:CDS
ATTCCAAGTTTCTCAAAAGC+AGG 0.470728 1_1:+44100950 Msa0023150:CDS
GCAAACTTCCTTTCCCAAGA+AGG 0.471774 1_1:-44101971 None:intergenic
AACCGCCAATCATAGTATCT+TGG 0.473051 1_1:-44101413 None:intergenic
GCGGTGAACATCCTATAGAT+TGG 0.484045 1_1:-44102031 None:intergenic
GTGATGACCTTCATGCTGGC+TGG 0.485390 1_1:+44104084 Msa0023150:CDS
TGGTTTCTGCTAAAAGAGAA+TGG 0.485995 1_1:+44103024 Msa0023150:CDS
TTAGATGTCATCTATGAACT+TGG 0.487206 1_1:+44101277 Msa0023150:CDS
GGTTTCTGCTAAAAGAGAAT+GGG 0.495685 1_1:+44103025 Msa0023150:CDS
AAGAGAATGGGGAGCAAGAT+GGG 0.496506 1_1:+44103037 Msa0023150:CDS
TTCTTTATTGCTGTGTTCTG+GGG 0.499911 1_1:+44103475 Msa0023150:CDS
TACTGAACCTATATCTCTAA+AGG 0.505583 1_1:+44100170 Msa0023150:CDS
ACTTAAAATTGACTAATATG+TGG 0.505933 1_1:-44104783 None:intergenic
TGTTTCTGTACCGTCGGAGT+TGG 0.507189 1_1:+44102112 Msa0023150:CDS
GCAGAGGAAAACAGTAAGAA+TGG 0.507829 1_1:-44103710 None:intergenic
GAAGAATGAAACTTCAATAG+AGG 0.510130 1_1:+44104394 Msa0023150:CDS
TCTATGAACTTGGCTTAGAA+AGG 0.510955 1_1:+44101287 Msa0023150:CDS
TCATGGACAGCTGCTGGTGA+TGG 0.512726 1_1:-44102179 None:intergenic
CAGGGTCTTGGACTTGCTAT+CGG 0.513262 1_1:+44104012 Msa0023150:intron
TTGATGGGTCCCTCAGGAAG+TGG 0.521018 1_1:+44100844 Msa0023150:CDS
ATAAGCCAGCCCACAGTTGG+TGG 0.521779 1_1:+44100901 Msa0023150:CDS
AACTATGTCTGTTGCAGCTG+AGG 0.522876 1_1:+44100101 Msa0023150:exon
TTGGCATTGATGGGTCCCTC+AGG 0.522971 1_1:+44100838 Msa0023150:CDS
CAATCATCTTAGGGTTACTC+TGG 0.523751 1_1:+44103153 Msa0023150:CDS
TTTAGAGATATAGGTTCAGT+AGG 0.526236 1_1:-44100168 None:intergenic
AACAACTTTGGCTTCGGTAA+CGG 0.529302 1_1:+44104062 Msa0023150:CDS
CATAGTTAACCCTTAAAATG+TGG 0.530886 1_1:-44100085 None:intergenic
AGAATAAGCCAGCCCACAGT+TGG 0.531012 1_1:+44100898 Msa0023150:CDS
GCCTTCAAATCTTCATCTAG+AGG 0.532060 1_1:-44102996 None:intergenic
GATATCTTGAATGGGATAAG+TGG 0.537617 1_1:+44100793 Msa0023150:CDS
AGGATATTGAAGCCGGAACA+AGG 0.537820 1_1:+44100121 Msa0023150:CDS
TTTAACATAGCTCTTTCTTG+AGG 0.538339 1_1:-44103532 None:intergenic
AGGAGAAGGATATCTTGAAT+GGG 0.540544 1_1:+44100785 Msa0023150:CDS
ACTTCCAAAGACATTAACTA+AGG 0.541864 1_1:+44101234 Msa0023150:CDS
ATCAATGCCAAAACTTCACC+TGG 0.543773 1_1:-44100826 None:intergenic
AGTAGTTGCTTTGATTGCCA+TGG 0.544999 1_1:+44104335 Msa0023150:CDS
CTTGTCTTTCCACTTCCTGA+GGG 0.545367 1_1:-44100853 None:intergenic
CATTTATATTTCCATTAGCA+AGG 0.548750 1_1:-44102088 None:intergenic
AAAGAGAATGGGGAGCAAGA+TGG 0.549608 1_1:+44103036 Msa0023150:CDS
TCGGAGTTGGAGGATAAAGT+TGG 0.551081 1_1:+44102125 Msa0023150:CDS
TCATCAAGAAACAGAATGGA+AGG 0.553309 1_1:-44101504 None:intergenic
CATGACATCAAGTGAGGAGA+AGG 0.553962 1_1:+44100771 Msa0023150:CDS
AAGTTGATCCTTCTTGGGAA+AGG 0.555829 1_1:+44101963 Msa0023150:CDS
TGCCAAGATACTATGATTGG+CGG 0.556138 1_1:+44101411 Msa0023150:CDS
TAGAACCACCAACTGTGGGC+TGG 0.557150 1_1:-44100906 None:intergenic
GTTGAATCCAAACCAGATGT+TGG 0.558682 1_1:-44101528 None:intergenic
GCTGGCTTATTCTTCCTCCA+AGG 0.558936 1_1:-44100888 None:intergenic
GTAAATGGAGTCAAAATTGA+CGG 0.559202 1_1:+44104300 Msa0023150:CDS
AACTCTCTTCCTCTCTCCAC+CGG 0.559243 1_1:-44101454 None:intergenic
ATAAGTGGTTCTGTAAATCC+AGG 0.564779 1_1:+44100808 Msa0023150:CDS
AGGTGCCAAGATACTATGAT+TGG 0.566423 1_1:+44101408 Msa0023150:intron
GTTACCTCATGGACAGCTGC+TGG 0.566768 1_1:-44102185 None:intergenic
AGACATTAACGTACGCAGCT+CGG 0.567467 1_1:+44101206 Msa0023150:CDS
TGAGCAATAGTTTGTAAGTG+TGG 0.570362 1_1:-44104248 None:intergenic
AACGGTGATGACCTTCATGC+TGG 0.573509 1_1:+44104080 Msa0023150:CDS
ACTAGTCGACACATCAGTAC+CGG 0.575768 1_1:+44104618 Msa0023150:three_prime_UTR
ATGACCTTCATGCTGGCTGG+AGG 0.576909 1_1:+44104087 Msa0023150:CDS
AACTTCAAAAGCAGGAAATG+TGG 0.578237 1_1:+44104471 Msa0023150:three_prime_UTR
TGGTTCATCAAGAAACAGAA+TGG 0.578655 1_1:-44101508 None:intergenic
ACGAAAGATATGCCAAGAAA+CGG 0.579277 1_1:-44104368 None:intergenic
AAATGATGTTTCTGTACCGT+CGG 0.580848 1_1:+44102106 Msa0023150:CDS
ACTTGTCTTTCCACTTCCTG+AGG 0.581307 1_1:-44100854 None:intergenic
GTCTCTTTCACAGTTAGGTG+AGG 0.588901 1_1:-44101187 None:intergenic
GCAGCTGAGGATATTGAAGC+CGG 0.590731 1_1:+44100114 Msa0023150:CDS
ATAGTTAACCCTTAAAATGT+GGG 0.591060 1_1:-44100084 None:intergenic
TGAAGATTTGAAGGCCAAAG+TGG 0.599686 1_1:+44103004 Msa0023150:CDS
GTTCACTGATGTGACCTACA+AGG 0.606243 1_1:+44100735 Msa0023150:intron
TCATCTTAGGGTTACTCTGG+TGG 0.607350 1_1:+44103156 Msa0023150:CDS
GGAATAAGAAGCCCTATACA+AGG 0.609694 1_1:-44100063 None:intergenic
AGTGATAGAACCACCAACTG+TGG 0.609772 1_1:-44100911 None:intergenic
GTGATAGAACCACCAACTGT+GGG 0.613119 1_1:-44100910 None:intergenic
GCGGAGTATCCGGTGGAGAG+AGG 0.613367 1_1:+44101445 Msa0023150:CDS
GGCATATGAATCTCGAGTTG+CGG 0.613784 1_1:+44102941 Msa0023150:CDS
GGTCGCTCGTTGTTCTAGCA+AGG 0.614393 1_1:-44103597 None:intergenic
AAATCCTCCAGCCAGCATGA+AGG 0.615028 1_1:-44104091 None:intergenic
TCTGGAGAGGAATCAAGGAA+AGG 0.616382 1_1:+44103081 Msa0023150:CDS
GTAATATCAGGTCTAATGGA+AGG 0.617265 1_1:-44103618 None:intergenic
CCTGAGCTGCAATGATGCAG+AGG 0.626912 1_1:-44103726 None:intergenic
ACCTACAAGGTAGTACTCAA+AGG 0.628173 1_1:+44100748 Msa0023150:CDS
CTAGTCGACACATCAGTACC+GGG 0.629540 1_1:+44104619 Msa0023150:three_prime_UTR
TTGAAGCCGGAACAAGGGCA+AGG 0.636386 1_1:+44100127 Msa0023150:CDS
GAAACAGTCTACTTGATGGT+TGG 0.636949 1_1:-44101929 None:intergenic
TTTGTTCGCGGAGTATCCGG+TGG 0.641545 1_1:+44101438 Msa0023150:CDS
GGAGAGGAATCAAGGAAAGG+AGG 0.644007 1_1:+44103084 Msa0023150:CDS
GGATATTGAAGCCGGAACAA+GGG 0.644710 1_1:+44100122 Msa0023150:CDS
TAACCCTAAGATGATTGCAG+TGG 0.650772 1_1:-44103147 None:intergenic
ACTTTATCCTCCAACTCCGA+CGG 0.651499 1_1:-44102122 None:intergenic
GCTTATTTCCATGAATCCAG+CGG 0.654063 1_1:+44102052 Msa0023150:CDS
GGTAGTTGAAAGACATGTAG+CGG 0.654216 1_1:-44104227 None:intergenic
GTTTCTGCTAAAAGAGAATG+GGG 0.655333 1_1:+44103026 Msa0023150:CDS
AGAAAGAGCTATGTTAAACA+AGG 0.658013 1_1:+44103537 Msa0023150:CDS
GGAAAACAGTAAGAATGGTG+AGG 0.658084 1_1:-44103705 None:intergenic
GCTGGATTCATGGAAATAAG+CGG 0.662590 1_1:-44102050 None:intergenic
ATTGGCGGTTCATTTGTTCG+CGG 0.662831 1_1:+44101426 Msa0023150:CDS
CAGCCATGAAGTAAACAACA+AGG 0.669848 1_1:-44103654 None:intergenic
ATCACCAGCAGCTGTCCATG+AGG 0.672924 1_1:+44102181 Msa0023150:CDS
CAAAGGCATGACATCAAGTG+AGG 0.682074 1_1:+44100765 Msa0023150:CDS
AATGGAGTCAAAATTGACGG+TGG 0.691005 1_1:+44104303 Msa0023150:CDS
ACAACAAGGAGAAAGAGCAC+CGG 0.699450 1_1:-44103640 None:intergenic
GAAACGGTAACCGAAAACCA+TGG 0.708444 1_1:-44104352 None:intergenic
GATGCTGCAAGACATAGCAG+AGG 0.724923 1_1:+44101572 Msa0023150:CDS
CATCTGAACGATCTTCAAAG+CGG 0.736726 1_1:-44101553 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATCTTATTGATAAAATCA+CGG - chr1_1:44101097-44101116 None:intergenic 15.0%
!!! AGAAACTTTTTCAAATATAT+AGG - chr1_1:44102559-44102578 None:intergenic 15.0%
!! AATATTAAAACATATGCATT+TGG + chr1_1:44102703-44102722 Msa0023150:intron 15.0%
!!! TTTTATTCAATAAACACTTA+AGG - chr1_1:44103291-44103310 None:intergenic 15.0%
!! ATGATAACATATTAATGTTA+TGG + chr1_1:44103434-44103453 Msa0023150:intron 15.0%
!! GAATATTTGATCATAAATTT+AGG - chr1_1:44104138-44104157 None:intergenic 15.0%
!!! ATTTTTACCTTTAGAGATAT+AGG - chr1_1:44100180-44100199 None:intergenic 20.0%
!!! ATTATATGGTTTTCTCAATT+TGG + chr1_1:44100490-44100509 Msa0023150:intron 20.0%
!! TATACTATAACTCATTAAGT+GGG - chr1_1:44100692-44100711 None:intergenic 20.0%
!! ATATACTATAACTCATTAAG+TGG - chr1_1:44100693-44100712 None:intergenic 20.0%
!! TATAAGCATTATAACCAATA+TGG + chr1_1:44101329-44101348 Msa0023150:intron 20.0%
!!! AAAAAAGTATATCTCCATAT+TGG - chr1_1:44101346-44101365 None:intergenic 20.0%
!!! ATATGGAGATATACTTTTTT+TGG + chr1_1:44101346-44101365 Msa0023150:intron 20.0%
!!! AGATATACTTTTTTTGGTTA+TGG + chr1_1:44101352-44101371 Msa0023150:intron 20.0%
!! AAATCAAATTTGATAAGCTA+TGG - chr1_1:44101657-44101676 None:intergenic 20.0%
!!! AGCTTATCAAATTTGATTTT+AGG + chr1_1:44101658-44101677 Msa0023150:intron 20.0%
!! TGATTAACGTGTTAATTATA+TGG + chr1_1:44101874-44101893 Msa0023150:intron 20.0%
!!! CCATTTTCTTAAATTAATAC+CGG + chr1_1:44102333-44102352 Msa0023150:intron 20.0%
!!! ATTTAACTTCATAGATATGT+TGG - chr1_1:44102407-44102426 None:intergenic 20.0%
!! TATTCATTCCACTATTATAT+TGG + chr1_1:44102517-44102536 Msa0023150:intron 20.0%
!!! AATATTTTTCGCTACATATA+AGG - chr1_1:44102689-44102708 None:intergenic 20.0%
!!! AATGAAAGAACATTGTTATT+TGG - chr1_1:44102787-44102806 None:intergenic 20.0%
!! AACAGAGAAGAAAAAAATAA+TGG + chr1_1:44102965-44102984 Msa0023150:CDS 20.0%
!! CTTATCATATTTACTTGAAT+AGG - chr1_1:44103359-44103378 None:intergenic 20.0%
!! AATAGAGGATAAAAATATCA+AGG + chr1_1:44104409-44104428 Msa0023150:exon 20.0%
!! ACATATGATTGAACAAAAAA+AGG - chr1_1:44104545-44104564 None:intergenic 20.0%
!! ACTTAAAATTGACTAATATG+TGG - chr1_1:44104786-44104805 None:intergenic 20.0%
!! TTCTTATTCCCACATTTTAA+GGG + chr1_1:44100076-44100095 Msa0023150:five_prime_UTR 25.0%
! ATAGTTAACCCTTAAAATGT+GGG - chr1_1:44100087-44100106 None:intergenic 25.0%
!!! GTAACTTTTCAAGTTATCAT+AGG + chr1_1:44100438-44100457 Msa0023150:intron 25.0%
! ATTTGGTCCTTGAAATTATA+TGG + chr1_1:44100476-44100495 Msa0023150:intron 25.0%
! GAGAAAACCATATAATTTCA+AGG - chr1_1:44100486-44100505 None:intergenic 25.0%
! AGCATACAATACAAAACTAT+TGG - chr1_1:44101381-44101400 None:intergenic 25.0%
! TAACGTGTTAATTATATGGT+AGG + chr1_1:44101878-44101897 Msa0023150:intron 25.0%
! CATTTATATTTCCATTAGCA+AGG - chr1_1:44102091-44102110 None:intergenic 25.0%
! AAAATAGAAATGTTACCTCA+TGG - chr1_1:44102199-44102218 None:intergenic 25.0%
!! TGAGTTAATTTAAGATGTGT+TGG - chr1_1:44102300-44102319 None:intergenic 25.0%
! CCGGTATTAATTTAAGAAAA+TGG - chr1_1:44102336-44102355 None:intergenic 25.0%
!! CCATTTTCTCAAATTAATAC+CGG + chr1_1:44102437-44102456 Msa0023150:intron 25.0%
!!! ATATATAGGAGTGTTTTATG+TGG - chr1_1:44102545-44102564 None:intergenic 25.0%
! TTTATTGCAAACAGATTACT+TGG + chr1_1:44102606-44102625 Msa0023150:intron 25.0%
! TAAAGTGATTCATTTACTCA+TGG - chr1_1:44102861-44102880 None:intergenic 25.0%
! AATCACTTTATACATCAATC+AGG + chr1_1:44102871-44102890 Msa0023150:intron 25.0%
!!! TGAATTTTAACAGTATCTAG+TGG + chr1_1:44102917-44102936 Msa0023150:intron 25.0%
!! TTATAACCACTATGGTTTTT+CGG - chr1_1:44103242-44103261 None:intergenic 25.0%
!!! TTACTTGAATAGGCTTTATT+TGG - chr1_1:44103349-44103368 None:intergenic 25.0%
! CATATTAATGTTATGGTTTC+AGG + chr1_1:44103441-44103460 Msa0023150:intron 25.0%
! GTAAATATTGCTGTAAAAAC+CGG - chr1_1:44103508-44103527 None:intergenic 25.0%
! AAAAAAAAGAAAAACTCTCC+CGG - chr1_1:44104640-44104659 None:intergenic 25.0%
!!! AGAGTTTTTCTTTTTTTTGG+TGG + chr1_1:44104642-44104661 Msa0023150:three_prime_UTR 25.0%
!!! ACTCTTTTGAAAATGTTTGA+AGG + chr1_1:44104675-44104694 Msa0023150:three_prime_UTR 25.0%
! CATATTATTGCTGTCAAATT+CGG - chr1_1:44104814-44104833 None:intergenic 25.0%
! CTTCTTATTCCCACATTTTA+AGG + chr1_1:44100075-44100094 Msa0023150:five_prime_UTR 30.0%
CATAGTTAACCCTTAAAATG+TGG - chr1_1:44100088-44100107 None:intergenic 30.0%
TTTAGAGATATAGGTTCAGT+AGG - chr1_1:44100171-44100190 None:intergenic 30.0%
TACTGAACCTATATCTCTAA+AGG + chr1_1:44100170-44100189 Msa0023150:CDS 30.0%
TTCATTAGCTATCAAGAACA+CGG + chr1_1:44100321-44100340 Msa0023150:intron 30.0%
TAAACTTGAAACTTTGTGCA+AGG - chr1_1:44100388-44100407 None:intergenic 30.0%
ATATGACACATATTGTGAGA+CGG - chr1_1:44100624-44100643 None:intergenic 30.0%
!! TGTCATATTTGAGTTTTACG+CGG + chr1_1:44100636-44100655 Msa0023150:intron 30.0%
! ACAAGTCTTTTAAATCTCCT+TGG + chr1_1:44100871-44100890 Msa0023150:CDS 30.0%
TGAGAAACTTGGAATATGAT+TGG - chr1_1:44100945-44100964 None:intergenic 30.0%
AAAAGCAGGTTAAAATCCAA+TGG + chr1_1:44100964-44100983 Msa0023150:intron 30.0%
TTAAAATCCAATGGTTGACT+AGG + chr1_1:44100973-44100992 Msa0023150:intron 30.0%
TAAAATCCAATGGTTGACTA+GGG + chr1_1:44100974-44100993 Msa0023150:intron 30.0%
GTTTGAATTGACGATGAATT+TGG + chr1_1:44101055-44101074 Msa0023150:intron 30.0%
! TACTTACAAGAAGCATATGA+TGG + chr1_1:44101123-44101142 Msa0023150:intron 30.0%
TTAATGTCTCTTTCACAGTT+AGG - chr1_1:44101195-44101214 None:intergenic 30.0%
ACTTCCAAAGACATTAACTA+AGG + chr1_1:44101234-44101253 Msa0023150:CDS 30.0%
TTAGATGTCATCTATGAACT+TGG + chr1_1:44101277-44101296 Msa0023150:CDS 30.0%
TGTATTGTATGCTCAAAAAC+AGG + chr1_1:44101388-44101407 Msa0023150:intron 30.0%
ATGTTTAATTCTTCGCTTTG+CGG + chr1_1:44101836-44101855 Msa0023150:intron 30.0%
! AAAGGAAGTTTGCTTTACTT+TGG + chr1_1:44101981-44102000 Msa0023150:CDS 30.0%
! ATGGATTACTTCCAATCTAT+AGG + chr1_1:44102020-44102039 Msa0023150:CDS 30.0%
! CCGGTATTAATTTGAGAAAA+TGG - chr1_1:44102440-44102459 None:intergenic 30.0%
ATGTGGATCCAATATAATAG+TGG - chr1_1:44102528-44102547 None:intergenic 30.0%
GTTACTTCATCAGTATCTTA+TGG + chr1_1:44102636-44102655 Msa0023150:intron 30.0%
GAACATTCATGTCAAACAAT+TGG - chr1_1:44102757-44102776 None:intergenic 30.0%
TCTTCTTCAGCGTTATTAAA+TGG - chr1_1:44102810-44102829 None:intergenic 30.0%
!! ATTTTAACAGTATCTAGTGG+AGG + chr1_1:44102920-44102939 Msa0023150:intron 30.0%
! AGCAATTTTCCATACTTTTC+TGG + chr1_1:44103063-44103082 Msa0023150:CDS 30.0%
TCATAAGATGCTTATGTCTT+AGG - chr1_1:44103418-44103437 None:intergenic 30.0%
! TTTTCTTTATTGCTGTGTTC+TGG + chr1_1:44103473-44103492 Msa0023150:CDS 30.0%
TTTCTTTATTGCTGTGTTCT+GGG + chr1_1:44103474-44103493 Msa0023150:CDS 30.0%
TTTAACATAGCTCTTTCTTG+AGG - chr1_1:44103535-44103554 None:intergenic 30.0%
AGAAAGAGCTATGTTAAACA+AGG + chr1_1:44103537-44103556 Msa0023150:CDS 30.0%
ATATTACGAAACAGTCATGA+AGG - chr1_1:44103853-44103872 None:intergenic 30.0%
TCATGACTGTTTCGTAATAT+TGG + chr1_1:44103853-44103872 Msa0023150:intron 30.0%
! GTTCTATCAAAATTTTACCC+AGG + chr1_1:44103878-44103897 Msa0023150:intron 30.0%
GTTAAATTCTTCTGTTAGAC+TGG - chr1_1:44104160-44104179 None:intergenic 30.0%
TAACAGAAGAATTTAACGTG+TGG + chr1_1:44104163-44104182 Msa0023150:intron 30.0%
AAGTCCCAATATTCATTTCT+TGG + chr1_1:44104202-44104221 Msa0023150:CDS 30.0%
GGATCCAAGAAATGAATATT+GGG - chr1_1:44104209-44104228 None:intergenic 30.0%
GTAAATGGAGTCAAAATTGA+CGG + chr1_1:44104300-44104319 Msa0023150:CDS 30.0%
GAAGAATGAAACTTCAATAG+AGG + chr1_1:44104394-44104413 Msa0023150:CDS 30.0%
TTTAAACGAACTTCAAAAGC+AGG + chr1_1:44104463-44104482 Msa0023150:three_prime_UTR 30.0%
ATGCTAACAAGCATTTCAAT+TGG - chr1_1:44104501-44104520 None:intergenic 30.0%
! AATGCTTGTTAGCATTAGTA+AGG + chr1_1:44104506-44104525 Msa0023150:three_prime_UTR 30.0%
! GGGAGAGTTTTTCTTTTTTT+TGG + chr1_1:44104639-44104658 Msa0023150:three_prime_UTR 30.0%
! TATAGTGGAATAGGTTAATC+TGG + chr1_1:44104757-44104776 Msa0023150:three_prime_UTR 30.0%
CGAATTTGACAGCAATAATA+TGG + chr1_1:44104812-44104831 Msa0023150:three_prime_UTR 30.0%
TCTATTAAAGGTTTGAGCCA+TGG - chr1_1:44100278-44100297 None:intergenic 35.0%
GCTCAAACCTTTAATAGAAC+AGG + chr1_1:44100280-44100299 Msa0023150:intron 35.0%
AACCTTTAATAGAACAGGCA+AGG + chr1_1:44100285-44100304 Msa0023150:intron 35.0%
ATCCTTGCCTGTTCTATTAA+AGG - chr1_1:44100290-44100309 None:intergenic 35.0%
AGGAGAAGGATATCTTGAAT+GGG + chr1_1:44100785-44100804 Msa0023150:CDS 35.0%
GATATCTTGAATGGGATAAG+TGG + chr1_1:44100793-44100812 Msa0023150:CDS 35.0%
! ATAAGTGGTTCTGTAAATCC+AGG + chr1_1:44100808-44100827 Msa0023150:CDS 35.0%
! TGTAAATCCAGGTGAAGTTT+TGG + chr1_1:44100819-44100838 Msa0023150:CDS 35.0%
! AGTCTTTTAAATCTCCTTGG+AGG + chr1_1:44100874-44100893 Msa0023150:CDS 35.0%
ATTCCAAGTTTCTCAAAAGC+AGG + chr1_1:44100950-44100969 Msa0023150:CDS 35.0%
!! TAACCTGCTTTTGAGAAACT+TGG - chr1_1:44100956-44100975 None:intergenic 35.0%
TGCTCCTTAGTTAATGTCTT+TGG - chr1_1:44101241-44101260 None:intergenic 35.0%
GACATTAACTAAGGAGCAAA+AGG + chr1_1:44101243-44101262 Msa0023150:CDS 35.0%
TCTATGAACTTGGCTTAGAA+AGG + chr1_1:44101287-44101306 Msa0023150:CDS 35.0%
ACTTGGCTTAGAAAGGTAAA+TGG + chr1_1:44101294-44101313 Msa0023150:intron 35.0%
TCATCAAGAAACAGAATGGA+AGG - chr1_1:44101507-44101526 None:intergenic 35.0%
TGGTTCATCAAGAAACAGAA+TGG - chr1_1:44101511-44101530 None:intergenic 35.0%
TTTCTTGATGAACCAACATC+TGG + chr1_1:44101516-44101535 Msa0023150:CDS 35.0%
TCTTTATCAACGATGAAGAG+AGG - chr1_1:44101620-44101639 None:intergenic 35.0%
CATGCTTACATGCATATGAA+TGG - chr1_1:44101819-44101838 None:intergenic 35.0%
GTGTTAATTATATGGTAGGC+TGG + chr1_1:44101882-44101901 Msa0023150:intron 35.0%
TTGTGAAACAGTCTACTTGA+TGG - chr1_1:44101936-44101955 None:intergenic 35.0%
!! TTTGACAAGTTGATCCTTCT+TGG + chr1_1:44101957-44101976 Msa0023150:CDS 35.0%
!! TTGACAAGTTGATCCTTCTT+GGG + chr1_1:44101958-44101977 Msa0023150:CDS 35.0%
!! TGGAAAAGCATCAGAATCAA+TGG + chr1_1:44102001-44102020 Msa0023150:CDS 35.0%
! TTTTTGCTAGACCTTGCTAA+TGG + chr1_1:44102077-44102096 Msa0023150:CDS 35.0%
! AAATGATGTTTCTGTACCGT+CGG + chr1_1:44102106-44102125 Msa0023150:CDS 35.0%
GCAGCAGTTGAAACATATAA+TGG + chr1_1:44102152-44102171 Msa0023150:CDS 35.0%
ATAGCTGTAGTAACTCGTAA+TGG - chr1_1:44102223-44102242 None:intergenic 35.0%
!! ATGCATTTGGTGCAATTGAT+TGG + chr1_1:44102716-44102735 Msa0023150:intron 35.0%
ACCTCTAGATGAAGATTTGA+AGG + chr1_1:44102995-44103014 Msa0023150:CDS 35.0%
! TCTTTTAGCAGAAACCACTT+TGG - chr1_1:44103021-44103040 None:intergenic 35.0%
TGGTTTCTGCTAAAAGAGAA+TGG + chr1_1:44103024-44103043 Msa0023150:CDS 35.0%
GGTTTCTGCTAAAAGAGAAT+GGG + chr1_1:44103025-44103044 Msa0023150:CDS 35.0%
GTTTCTGCTAAAAGAGAATG+GGG + chr1_1:44103026-44103045 Msa0023150:CDS 35.0%
!! TTTTCCATACTTTTCTGGAG+AGG + chr1_1:44103068-44103087 Msa0023150:CDS 35.0%
TTATCCACTGCAATCATCTT+AGG + chr1_1:44103143-44103162 Msa0023150:CDS 35.0%
TATCCACTGCAATCATCTTA+GGG + chr1_1:44103144-44103163 Msa0023150:CDS 35.0%
!!! ATCTTTTGGGTTCTTAGCAT+CGG - chr1_1:44103186-44103205 None:intergenic 35.0%
!! AAAAGCGCTTATAACCACTA+TGG - chr1_1:44103250-44103269 None:intergenic 35.0%
TTAATGTTATGGTTTCAGGC+AGG + chr1_1:44103445-44103464 Msa0023150:intron 35.0%
TTCTTTATTGCTGTGTTCTG+GGG + chr1_1:44103475-44103494 Msa0023150:CDS 35.0%
GTAATATCAGGTCTAATGGA+AGG - chr1_1:44103621-44103640 None:intergenic 35.0%
TCCATTAGACCTGATATTAC+CGG + chr1_1:44103621-44103640 Msa0023150:CDS 35.0%
!! TCTCCTTGTTGTTTACTTCA+TGG + chr1_1:44103651-44103670 Msa0023150:CDS 35.0%
GTAAGAATGGTGAGGAAAAA+GGG - chr1_1:44103700-44103719 None:intergenic 35.0%
AGTAAGAATGGTGAGGAAAA+AGG - chr1_1:44103701-44103720 None:intergenic 35.0%
!! ACCAGTTGAACTGTTTTGTT+CGG - chr1_1:44103814-44103833 None:intergenic 35.0%
TGACTGTTTCGTAATATTGG+CGG + chr1_1:44103856-44103875 Msa0023150:intron 35.0%
ATAGCTTACAGTGCTAACAA+TGG + chr1_1:44103977-44103996 Msa0023150:intron 35.0%
CTTGAAAAGAGCAACAACTT+TGG + chr1_1:44104050-44104069 Msa0023150:CDS 35.0%
! ATTTAGGTATGCGTTTTACC+TGG - chr1_1:44104122-44104141 None:intergenic 35.0%
TGGGACTTTCTGCAAAATTA+AGG - chr1_1:44104190-44104209 None:intergenic 35.0%
CGGATCCAAGAAATGAATAT+TGG - chr1_1:44104210-44104229 None:intergenic 35.0%
! TGAGCAATAGTTTGTAAGTG+TGG - chr1_1:44104251-44104270 None:intergenic 35.0%
!!! ATTTTGACTCCATTTACGAC+AGG - chr1_1:44104297-44104316 None:intergenic 35.0%
ACGAAAGATATGCCAAGAAA+CGG - chr1_1:44104371-44104390 None:intergenic 35.0%
AACTTCAAAAGCAGGAAATG+TGG + chr1_1:44104471-44104490 Msa0023150:three_prime_UTR 35.0%
! AGCTTTGTAACTGCTATAGT+TGG + chr1_1:44104703-44104722 Msa0023150:three_prime_UTR 35.0%
GTAACTGCTATAGTTGGAAT+AGG + chr1_1:44104709-44104728 Msa0023150:three_prime_UTR 35.0%
GCTATAGTTGGAATAGGTTA+AGG + chr1_1:44104715-44104734 Msa0023150:three_prime_UTR 35.0%
AAGATCTGTAACTGCTATAG+TGG + chr1_1:44104742-44104761 Msa0023150:three_prime_UTR 35.0%
! TGTAACTGCTATAGTGGAAT+AGG + chr1_1:44104748-44104767 Msa0023150:three_prime_UTR 35.0%
!! AGTCTTGATTTTGATCTCTG+CGG + chr1_1:44104845-44104864 Msa0023150:three_prime_UTR 35.0%
GGAATAAGAAGCCCTATACA+AGG - chr1_1:44100066-44100085 None:intergenic 40.0%
!!! TTTTGTACCTAGTTCTGCCA+TGG + chr1_1:44100258-44100277 Msa0023150:intron 40.0%
GAACATGGCTAACAATAGCA+TGG + chr1_1:44100352-44100371 Msa0023150:intron 40.0%
AACTTTGTGCAAGGCTGAAA+TGG - chr1_1:44100379-44100398 None:intergenic 40.0%
GGTCATTTGCATGCACAATT+TGG + chr1_1:44100459-44100478 Msa0023150:intron 40.0%
ACCTACAAGGTAGTACTCAA+AGG + chr1_1:44100748-44100767 Msa0023150:CDS 40.0%
GAGGAGAAGGATATCTTGAA+TGG + chr1_1:44100784-44100803 Msa0023150:CDS 40.0%
ATCAATGCCAAAACTTCACC+TGG - chr1_1:44100829-44100848 None:intergenic 40.0%
!! AGGTGAAGTTTTGGCATTGA+TGG + chr1_1:44100828-44100847 Msa0023150:CDS 40.0%
!!! GGTGAAGTTTTGGCATTGAT+GGG + chr1_1:44100829-44100848 Msa0023150:CDS 40.0%
TAGTAACCCTAGTCAACCAT+TGG - chr1_1:44100983-44101002 None:intergenic 40.0%
CGCGGAATCACAAAGTAAAT+TGG - chr1_1:44101028-44101047 None:intergenic 40.0%
TCAATTCAAACATGCATGCG+CGG - chr1_1:44101046-44101065 None:intergenic 40.0%
AGGTGCCAAGATACTATGAT+TGG + chr1_1:44101408-44101427 Msa0023150:intron 40.0%
TGCCAAGATACTATGATTGG+CGG + chr1_1:44101411-44101430 Msa0023150:CDS 40.0%
AACCGCCAATCATAGTATCT+TGG - chr1_1:44101416-44101435 None:intergenic 40.0%
GAGAGGAAGAGAGTTTGTAT+TGG + chr1_1:44101462-44101481 Msa0023150:CDS 40.0%
TGATGAACCAACATCTGGTT+TGG + chr1_1:44101521-44101540 Msa0023150:CDS 40.0%
GTTGAATCCAAACCAGATGT+TGG - chr1_1:44101531-44101550 None:intergenic 40.0%
CATCTGAACGATCTTCAAAG+CGG - chr1_1:44101556-44101575 None:intergenic 40.0%
TTTGATAAGCTATGGACGCT+AGG - chr1_1:44101649-44101668 None:intergenic 40.0%
! GAAACAGTCTACTTGATGGT+TGG - chr1_1:44101932-44101951 None:intergenic 40.0%
! AAGTTGATCCTTCTTGGGAA+AGG + chr1_1:44101963-44101982 Msa0023150:CDS 40.0%
GCTGGATTCATGGAAATAAG+CGG - chr1_1:44102053-44102072 None:intergenic 40.0%
GCTTATTTCCATGAATCCAG+CGG + chr1_1:44102052-44102071 Msa0023150:CDS 40.0%
TCAATCACATGTGTCTGTGT+CGG + chr1_1:44102260-44102279 Msa0023150:intron 40.0%
!! AAGATGTGTTGGTTTCCTGT+CGG - chr1_1:44102289-44102308 None:intergenic 40.0%
TAAAAGTGAGACGCAGAAAC+CGG - chr1_1:44102355-44102374 None:intergenic 40.0%
TAAAACTGACACGCAAACAC+CGG - chr1_1:44102459-44102478 None:intergenic 40.0%
ACTGACAGAATCACAAACAC+TGG - chr1_1:44102491-44102510 None:intergenic 40.0%
GCCTTCAAATCTTCATCTAG+AGG - chr1_1:44102999-44103018 None:intergenic 40.0%
TGAAGATTTGAAGGCCAAAG+TGG + chr1_1:44103004-44103023 Msa0023150:CDS 40.0%
GATTCCTCTCCAGAAAAGTA+TGG - chr1_1:44103075-44103094 None:intergenic 40.0%
!! ACTTTTCTGGAGAGGAATCA+AGG + chr1_1:44103076-44103095 Msa0023150:CDS 40.0%
TAACCCTAAGATGATTGCAG+TGG - chr1_1:44103150-44103169 None:intergenic 40.0%
CAATCATCTTAGGGTTACTC+TGG + chr1_1:44103153-44103172 Msa0023150:CDS 40.0%
! CCTGATCTTGCAGATCTTTT+GGG - chr1_1:44103199-44103218 None:intergenic 40.0%
! ACCTGATCTTGCAGATCTTT+TGG - chr1_1:44103200-44103219 None:intergenic 40.0%
GTTTGACCGAAAAACCATAG+TGG + chr1_1:44103233-44103252 Msa0023150:intron 40.0%
ACCGGTAATATCAGGTCTAA+TGG - chr1_1:44103625-44103644 None:intergenic 40.0%
CAGCCATGAAGTAAACAACA+AGG - chr1_1:44103657-44103676 None:intergenic 40.0%
!! CTTGTTGTTTACTTCATGGC+TGG + chr1_1:44103655-44103674 Msa0023150:CDS 40.0%
GGAAAACAGTAAGAATGGTG+AGG - chr1_1:44103708-44103727 None:intergenic 40.0%
GCAGAGGAAAACAGTAAGAA+TGG - chr1_1:44103713-44103732 None:intergenic 40.0%
ACCGAACAAAACAGTTCAAC+TGG + chr1_1:44103810-44103829 Msa0023150:intron 40.0%
! AAGAGCAACAACTTTGGCTT+CGG + chr1_1:44104056-44104075 Msa0023150:CDS 40.0%
! AACAACTTTGGCTTCGGTAA+CGG + chr1_1:44104062-44104081 Msa0023150:CDS 40.0%
GGTAGTTGAAAGACATGTAG+CGG - chr1_1:44104230-44104249 None:intergenic 40.0%
AATGGAGTCAAAATTGACGG+TGG + chr1_1:44104303-44104322 Msa0023150:CDS 40.0%
! AGTAGTTGCTTTGATTGCCA+TGG + chr1_1:44104335-44104354 Msa0023150:CDS 40.0%
! GCTTTGATTGCCATGGTTTT+CGG + chr1_1:44104342-44104361 Msa0023150:CDS 40.0%
AACTATGTCTGTTGCAGCTG+AGG + chr1_1:44100101-44100120 Msa0023150:exon 45.0%
AGGATATTGAAGCCGGAACA+AGG + chr1_1:44100121-44100140 Msa0023150:CDS 45.0%
GGATATTGAAGCCGGAACAA+GGG + chr1_1:44100122-44100141 Msa0023150:CDS 45.0%
CTTTATCCTTGCCCTTGTTC+CGG - chr1_1:44100136-44100155 None:intergenic 45.0%
AACACGGCGAAAGTAGAACA+TGG + chr1_1:44100337-44100356 Msa0023150:intron 45.0%
TGATGACAGATCCAGACGAA+GGG - chr1_1:44100578-44100597 None:intergenic 45.0%
! TTGATGACAGATCCAGACGA+AGG - chr1_1:44100579-44100598 None:intergenic 45.0%
GACACATATTGTGAGACGGA+GGG - chr1_1:44100620-44100639 None:intergenic 45.0%
TGACACATATTGTGAGACGG+AGG - chr1_1:44100621-44100640 None:intergenic 45.0%
GTTCACTGATGTGACCTACA+AGG + chr1_1:44100735-44100754 Msa0023150:intron 45.0%
GCCTTTGAGTACTACCTTGT+AGG - chr1_1:44100752-44100771 None:intergenic 45.0%
! CAAAGGCATGACATCAAGTG+AGG + chr1_1:44100765-44100784 Msa0023150:CDS 45.0%
CATGACATCAAGTGAGGAGA+AGG + chr1_1:44100771-44100790 Msa0023150:CDS 45.0%
CTTGTCTTTCCACTTCCTGA+GGG - chr1_1:44100856-44100875 None:intergenic 45.0%
ACTTGTCTTTCCACTTCCTG+AGG - chr1_1:44100857-44100876 None:intergenic 45.0%
GTGATAGAACCACCAACTGT+GGG - chr1_1:44100913-44100932 None:intergenic 45.0%
AGTGATAGAACCACCAACTG+TGG - chr1_1:44100914-44100933 None:intergenic 45.0%
! AGAAGCATATGATGGCATGC+AGG + chr1_1:44101131-44101150 Msa0023150:intron 45.0%
CATATGATGGCATGCAGGAT+AGG + chr1_1:44101136-44101155 Msa0023150:intron 45.0%
GTCTCTTTCACAGTTAGGTG+AGG - chr1_1:44101190-44101209 None:intergenic 45.0%
AGACATTAACGTACGCAGCT+CGG + chr1_1:44101206-44101225 Msa0023150:CDS 45.0%
ATTGGCGGTTCATTTGTTCG+CGG + chr1_1:44101426-44101445 Msa0023150:CDS 45.0%
! TCATTTGTTCGCGGAGTATC+CGG + chr1_1:44101435-44101454 Msa0023150:CDS 45.0%
TAATTCTTCGCTTTGCGGCA+TGG + chr1_1:44101841-44101860 Msa0023150:intron 45.0%
GCAAACTTCCTTTCCCAAGA+AGG - chr1_1:44101974-44101993 None:intergenic 45.0%
GCGGTGAACATCCTATAGAT+TGG - chr1_1:44102034-44102053 None:intergenic 45.0%
CAAAAACTCCGCTGGATTCA+TGG - chr1_1:44102063-44102082 None:intergenic 45.0%
ACTTTATCCTCCAACTCCGA+CGG - chr1_1:44102125-44102144 None:intergenic 45.0%
TCGGAGTTGGAGGATAAAGT+TGG + chr1_1:44102125-44102144 Msa0023150:CDS 45.0%
!! GCGTCTCACTTTTAGTGTTG+CGG + chr1_1:44102361-44102380 Msa0023150:intron 45.0%
AGAATCACAAACACTGGTCG+CGG - chr1_1:44102485-44102504 None:intergenic 45.0%
! GGCATATGAATCTCGAGTTG+CGG + chr1_1:44102941-44102960 Msa0023150:CDS 45.0%
AAAGAGAATGGGGAGCAAGA+TGG + chr1_1:44103036-44103055 Msa0023150:CDS 45.0%
AAGAGAATGGGGAGCAAGAT+GGG + chr1_1:44103037-44103056 Msa0023150:CDS 45.0%
TCTGGAGAGGAATCAAGGAA+AGG + chr1_1:44103081-44103100 Msa0023150:CDS 45.0%
!!! GGAGGCATGACTATTTTAGC+TGG + chr1_1:44103102-44103121 Msa0023150:CDS 45.0%
TCATCTTAGGGTTACTCTGG+TGG + chr1_1:44103156-44103175 Msa0023150:CDS 45.0%
CCCAAAAGATCTGCAAGATC+AGG + chr1_1:44103196-44103215 Msa0023150:CDS 45.0%
CTTATGTCTTAGGCTGCGTT+TGG - chr1_1:44103408-44103427 None:intergenic 45.0%
!! TGTGTTCTGGGGATTCTTTC+CGG + chr1_1:44103486-44103505 Msa0023150:CDS 45.0%
!! GAAAGAGCACCGGTAATATC+AGG - chr1_1:44103633-44103652 None:intergenic 45.0%
! ACAACAAGGAGAAAGAGCAC+CGG - chr1_1:44103643-44103662 None:intergenic 45.0%
CAACTGGTTGAACCTTGAAC+CGG + chr1_1:44103826-44103845 Msa0023150:intron 45.0%
AACTGGTTGAACCTTGAACC+GGG + chr1_1:44103827-44103846 Msa0023150:intron 45.0%
ACCCAGGTTTGAGCAGTTTA+AGG + chr1_1:44103894-44103913 Msa0023150:intron 45.0%
GCCTTAAACTGCTCAAACCT+GGG - chr1_1:44103898-44103917 None:intergenic 45.0%
TGCCTTAAACTGCTCAAACC+TGG - chr1_1:44103899-44103918 None:intergenic 45.0%
GCAGTTGAACCACGATCTAA+AGG + chr1_1:44103916-44103935 Msa0023150:intron 45.0%
ATCTAAAGGTCTCGCAGGTT+CGG + chr1_1:44103930-44103949 Msa0023150:intron 45.0%
CATCTCACACCTGTCGTAAA+TGG + chr1_1:44104285-44104304 Msa0023150:CDS 45.0%
GAAACGGTAACCGAAAACCA+TGG - chr1_1:44104355-44104374 None:intergenic 45.0%
! GGTTTTCGGTTACCGTTTCT+TGG + chr1_1:44104356-44104375 Msa0023150:CDS 45.0%
ACTAGTCGACACATCAGTAC+CGG + chr1_1:44104618-44104637 Msa0023150:three_prime_UTR 45.0%
GCAGCTGAGGATATTGAAGC+CGG + chr1_1:44100114-44100133 Msa0023150:CDS 50.0%
GTTTGAGCCATGGCAGAACT+AGG - chr1_1:44100268-44100287 None:intergenic 50.0%
ATCAAGTTCGTCCCTTCGTC+TGG + chr1_1:44100564-44100583 Msa0023150:intron 50.0%
GAGACGGAGGGAGTAATATC+AGG - chr1_1:44100608-44100627 None:intergenic 50.0%
! GCTGGCTTATTCTTCCTCCA+AGG - chr1_1:44100891-44100910 None:intergenic 50.0%
AGAATAAGCCAGCCCACAGT+TGG + chr1_1:44100898-44100917 Msa0023150:CDS 50.0%
AACTCTCTTCCTCTCTCCAC+CGG - chr1_1:44101457-44101476 None:intergenic 50.0%
GATGCTGCAAGACATAGCAG+AGG + chr1_1:44101572-44101591 Msa0023150:CDS 50.0%
AGGTCTAGCAAAAACTCCGC+TGG - chr1_1:44102071-44102090 None:intergenic 50.0%
! TGTTTCTGTACCGTCGGAGT+TGG + chr1_1:44102112-44102131 Msa0023150:CDS 50.0%
TGGTTTCGTGTCAGTGACAC+TGG - chr1_1:44102387-44102406 None:intergenic 50.0%
GGAGAGGAATCAAGGAAAGG+AGG + chr1_1:44103084-44103103 Msa0023150:CDS 50.0%
ACGAAACAGTCATGAAGGCC+CGG - chr1_1:44103848-44103867 None:intergenic 50.0%
ACAATGGCTGATTGCGATGC+AGG + chr1_1:44103993-44104012 Msa0023150:intron 50.0%
CAATGGCTGATTGCGATGCA+GGG + chr1_1:44103994-44104013 Msa0023150:intron 50.0%
!! CAGGGTCTTGGACTTGCTAT+CGG + chr1_1:44104012-44104031 Msa0023150:intron 50.0%
!! TGCTATCGGTGCTACGCTTA+TGG + chr1_1:44104026-44104045 Msa0023150:CDS 50.0%
AACGGTGATGACCTTCATGC+TGG + chr1_1:44104080-44104099 Msa0023150:CDS 50.0%
AAATCCTCCAGCCAGCATGA+AGG - chr1_1:44104094-44104113 None:intergenic 50.0%
CTAGTCGACACATCAGTACC+GGG + chr1_1:44104619-44104638 Msa0023150:three_prime_UTR 50.0%
TTGAAGCCGGAACAAGGGCA+AGG + chr1_1:44100127-44100146 Msa0023150:CDS 55.0%
!! TTGGCATTGATGGGTCCCTC+AGG + chr1_1:44100838-44100857 Msa0023150:CDS 55.0%
! TTGATGGGTCCCTCAGGAAG+TGG + chr1_1:44100844-44100863 Msa0023150:CDS 55.0%
ATAAGCCAGCCCACAGTTGG+TGG + chr1_1:44100901-44100920 Msa0023150:CDS 55.0%
TAGAACCACCAACTGTGGGC+TGG - chr1_1:44100909-44100928 None:intergenic 55.0%
! TTTGTTCGCGGAGTATCCGG+TGG + chr1_1:44101438-44101457 Msa0023150:CDS 55.0%
TTCTGTACCGTCGGAGTTGG+AGG + chr1_1:44102115-44102134 Msa0023150:CDS 55.0%
TCATGGACAGCTGCTGGTGA+TGG - chr1_1:44102182-44102201 None:intergenic 55.0%
ATCACCAGCAGCTGTCCATG+AGG + chr1_1:44102181-44102200 Msa0023150:CDS 55.0%
GTTACCTCATGGACAGCTGC+TGG - chr1_1:44102188-44102207 None:intergenic 55.0%
GGTCGCTCGTTGTTCTAGCA+AGG - chr1_1:44103600-44103619 None:intergenic 55.0%
CCTGAGCTGCAATGATGCAG+AGG - chr1_1:44103729-44103748 None:intergenic 55.0%
CCTCTGCATCATTGCAGCTC+AGG + chr1_1:44103726-44103745 Msa0023150:CDS 55.0%
AGTCATGAAGGCCCGGTTCA+AGG - chr1_1:44103841-44103860 None:intergenic 55.0%
CCTGCGAGACCTTTAGATCG+TGG - chr1_1:44103928-44103947 None:intergenic 55.0%
CCACGATCTAAAGGTCTCGC+AGG + chr1_1:44103925-44103944 Msa0023150:intron 55.0%
CTGATTGCGATGCAGGGTCT+TGG + chr1_1:44104000-44104019 Msa0023150:intron 55.0%
GTGATGACCTTCATGCTGGC+TGG + chr1_1:44104084-44104103 Msa0023150:CDS 55.0%
! ATGACCTTCATGCTGGCTGG+AGG + chr1_1:44104087-44104106 Msa0023150:CDS 55.0%
! GGCTGGAGGATTTTTCGTCC+AGG + chr1_1:44104101-44104120 Msa0023150:CDS 55.0%
! TGTCTGTGTCGGTCACCGAC+AGG + chr1_1:44102271-44102290 Msa0023150:intron 60.0%
! GCGGAGTATCCGGTGGAGAG+AGG + chr1_1:44101445-44101464 Msa0023150:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 44100061 44104888 44100061 ID=Msa0023150;Name=Msa0023150
chr1_1 mRNA 44100061 44104888 44100061 ID=Msa0023150-mRNA-1;Parent=Msa0023150;Name=Msa0023150-mRNA-1;_AED=0.04;_eAED=0.04;_QI=44|1|1|1|1|1|9|475|619
chr1_1 exon 44100061 44100191 44100061 ID=Msa0023150-mRNA-1:exon:12674;Parent=Msa0023150-mRNA-1
chr1_1 exon 44100736 44100971 44100736 ID=Msa0023150-mRNA-1:exon:12675;Parent=Msa0023150-mRNA-1
chr1_1 exon 44101153 44101308 44101153 ID=Msa0023150-mRNA-1:exon:12676;Parent=Msa0023150-mRNA-1
chr1_1 exon 44101410 44101593 44101410 ID=Msa0023150-mRNA-1:exon:12677;Parent=Msa0023150-mRNA-1
chr1_1 exon 44101900 44102202 44101900 ID=Msa0023150-mRNA-1:exon:12678;Parent=Msa0023150-mRNA-1
chr1_1 exon 44102930 44103217 44102930 ID=Msa0023150-mRNA-1:exon:12679;Parent=Msa0023150-mRNA-1
chr1_1 exon 44103463 44103747 44103463 ID=Msa0023150-mRNA-1:exon:12680;Parent=Msa0023150-mRNA-1
chr1_1 exon 44104015 44104122 44104015 ID=Msa0023150-mRNA-1:exon:12681;Parent=Msa0023150-mRNA-1
chr1_1 exon 44104201 44104888 44104201 ID=Msa0023150-mRNA-1:exon:12682;Parent=Msa0023150-mRNA-1
chr1_1 five_prime_UTR 44100061 44100104 44100061 ID=Msa0023150-mRNA-1:five_prime_utr;Parent=Msa0023150-mRNA-1
chr1_1 CDS 44100105 44100191 44100105 ID=Msa0023150-mRNA-1:cds;Parent=Msa0023150-mRNA-1
chr1_1 CDS 44100736 44100971 44100736 ID=Msa0023150-mRNA-1:cds;Parent=Msa0023150-mRNA-1
chr1_1 CDS 44101153 44101308 44101153 ID=Msa0023150-mRNA-1:cds;Parent=Msa0023150-mRNA-1
chr1_1 CDS 44101410 44101593 44101410 ID=Msa0023150-mRNA-1:cds;Parent=Msa0023150-mRNA-1
chr1_1 CDS 44101900 44102202 44101900 ID=Msa0023150-mRNA-1:cds;Parent=Msa0023150-mRNA-1
chr1_1 CDS 44102930 44103217 44102930 ID=Msa0023150-mRNA-1:cds;Parent=Msa0023150-mRNA-1
chr1_1 CDS 44103463 44103747 44103463 ID=Msa0023150-mRNA-1:cds;Parent=Msa0023150-mRNA-1
chr1_1 CDS 44104015 44104122 44104015 ID=Msa0023150-mRNA-1:cds;Parent=Msa0023150-mRNA-1
chr1_1 CDS 44104201 44104413 44104201 ID=Msa0023150-mRNA-1:cds;Parent=Msa0023150-mRNA-1
chr1_1 three_prime_UTR 44104414 44104888 44104414 ID=Msa0023150-mRNA-1:three_prime_utr;Parent=Msa0023150-mRNA-1
Gene Sequence

>Msa0023150

ATGTCTGTTGCAGCTGAGGATATTGAAGCCGGAACAAGGGCAAGGATAAAGTTTCAAACTGAACCTACTGAACCTATATCTCTAAAGTTCACTGATGTGACCTACAAGGTAGTACTCAAAGGCATGACATCAAGTGAGGAGAAGGATATCTTGAATGGGATAAGTGGTTCTGTAAATCCAGGTGAAGTTTTGGCATTGATGGGTCCCTCAGGAAGTGGAAAGACAAGTCTTTTAAATCTCCTTGGAGGAAGAATAAGCCAGCCCACAGTTGGTGGTTCTATCACTTACAATGACCAATCATATTCCAAGTTTCTCAAAAGCAGGATAGGATTTGTGACACAAGATGATGTTTTGTTTCCTCACCTAACTGTGAAAGAGACATTAACGTACGCAGCTCGGTTAAGACTTCCAAAGACATTAACTAAGGAGCAAAAGGAACAAAGAGCTTTAGATGTCATCTATGAACTTGGCTTAGAAAGGTGCCAAGATACTATGATTGGCGGTTCATTTGTTCGCGGAGTATCCGGTGGAGAGAGGAAGAGAGTTTGTATTGGCAATGAGATTATAATCAATCCTTCCATTCTGTTTCTTGATGAACCAACATCTGGTTTGGATTCAACAACCGCTTTGAAGATCGTTCAGATGCTGCAAGACATAGCAGAGGCTGGAAAAACAGTAGTGACAACAATTCACCAACCATCAAGTAGACTGTTTCACAAATTTGACAAGTTGATCCTTCTTGGGAAAGGAAGTTTGCTTTACTTTGGAAAAGCATCAGAATCAATGGATTACTTCCAATCTATAGGATGTTCACCGCTTATTTCCATGAATCCAGCGGAGTTTTTGCTAGACCTTGCTAATGGAAATATAAATGATGTTTCTGTACCGTCGGAGTTGGAGGATAAAGTTGGAAATGCAGCAGTTGAAACATATAATGGAAAACCATCACCAGCAGCTGTCCATGAGTATCTAGTGGAGGCATATGAATCTCGAGTTGCGGAAACAGAGAAGAAAAAAATAATGGTTTCTGTACCTCTAGATGAAGATTTGAAGGCCAAAGTGGTTTCTGCTAAAAGAGAATGGGGAGCAAGATGGGATGAGCAATTTTCCATACTTTTCTGGAGAGGAATCAAGGAAAGGAGGCATGACTATTTTAGCTGGTTGAGAATCACACAAGTTTTATCCACTGCAATCATCTTAGGGTTACTCTGGTGGCAATCCGATGCTAAGAACCCAAAAGATCTGCAAGATCAGGCAGGACTGCTTTTCTTTATTGCTGTGTTCTGGGGATTCTTTCCGGTTTTTACAGCAATATTTACATTTCCTCAAGAAAGAGCTATGTTAAACAAGGAACGCGCAGCAGATATGTACAGATTAAGCGCATACTTCCTTGCTAGAACAACGAGCGACCTTCCATTAGACCTGATATTACCGGTGCTCTTTCTCCTTGTTGTTTACTTCATGGCTGGTCTAAGACTAAGTGCTGCTCCCTTTTTCCTCACCATTCTTACTGTTTTCCTCTGCATCATTGCAGCTCAGGGTCTTGGACTTGCTATCGGTGCTACGCTTATGGACTTGAAAAGAGCAACAACTTTGGCTTCGGTAACGGTGATGACCTTCATGCTGGCTGGAGGATTTTTCGTCCAGAAAGTCCCAATATTCATTTCTTGGATCCGCTACATGTCTTTCAACTACCACACTTACAAACTATTGCTCAAAGTGCAATACGAACATCTCACACCTGTCGTAAATGGAGTCAAAATTGACGGTGGTTTAACAGAAGTAGTTGCTTTGATTGCCATGGTTTTCGGTTACCGTTTCTTGGCATATCTTTCGTTGCGAAGAATGAAACTTCAATAG

Protein sequence

>Msa0023150

MSVAAEDIEAGTRARIKFQTEPTEPISLKFTDVTYKVVLKGMTSSEEKDILNGISGSVNPGEVLALMGPSGSGKTSLLNLLGGRISQPTVGGSITYNDQSYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAARLRLPKTLTKEQKEQRALDVIYELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSILFLDEPTSGLDSTTALKIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASESMDYFQSIGCSPLISMNPAEFLLDLANGNINDVSVPSELEDKVGNAAVETYNGKPSPAAVHEYLVEAYESRVAETEKKKIMVSVPLDEDLKAKVVSAKREWGARWDEQFSILFWRGIKERRHDYFSWLRITQVLSTAIILGLLWWQSDAKNPKDLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLNKERAADMYRLSAYFLARTTSDLPLDLILPVLFLLVVYFMAGLRLSAAPFFLTILTVFLCIIAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVQKVPIFISWIRYMSFNYHTYKLLLKVQYEHLTPVVNGVKIDGGLTEVVALIAMVFGYRFLAYLSLRRMKLQ*