AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0804140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0804140 MtrunA17_Chr5g0412131 93.151 146 10 0 1 146 329 474 4.62e-98 290
Msa0804140 MtrunA17_Chr5g0412101 90.411 146 14 0 1 146 330 475 1.46e-95 283
Msa0804140 MtrunA17_Chr5g0412111 84.932 146 22 0 1 146 321 466 3.58e-89 267
Msa0804140 MtrunA17_Chr6g0454371 44.615 130 71 1 13 141 41 170 1.52e-39 131
Msa0804140 MtrunA17_Chr6g0454351 46.721 122 64 1 19 139 341 462 2.09e-37 132
Msa0804140 MtrunA17_Chr6g0454171 44.800 125 68 1 16 139 183 307 1.01e-35 125
Msa0804140 MtrunA17_Chr6g0454141 45.082 122 66 1 19 139 356 477 1.17e-35 128
Msa0804140 MtrunA17_Chr8g0336331 44.000 125 69 1 18 141 352 476 1.18e-35 128
Msa0804140 MtrunA17_Chr6g0454271 41.600 125 72 1 18 141 162 286 1.69e-35 124
Msa0804140 MtrunA17_Chr6g0454331 45.082 122 66 1 18 138 354 475 2.22e-35 127
Msa0804140 MtrunA17_Chr7g0217881 42.969 128 72 1 13 139 332 459 2.63e-35 127
Msa0804140 MtrunA17_Chr6g0454361 44.094 127 70 1 13 138 351 477 2.81e-35 127
Msa0804140 MtrunA17_Chr6g0454201 42.520 127 72 1 16 141 354 480 3.02e-35 127
Msa0804140 MtrunA17_Chr6g0454301 44.000 125 69 1 18 141 606 730 6.36e-35 127
Msa0804140 MtrunA17_Chr6g0454301 39.024 123 74 1 18 139 105 227 2.30e-27 106
Msa0804140 MtrunA17_Chr3g0078841 43.089 123 69 1 18 139 353 475 8.34e-35 125
Msa0804140 MtrunA17_Chr6g0454211 43.200 125 70 1 18 141 642 766 8.95e-35 127
Msa0804140 MtrunA17_Chr6g0454211 58.140 43 18 0 18 60 194 236 6.14e-13 65.1
Msa0804140 MtrunA17_Chr6g0454401 43.846 130 72 1 13 141 351 480 1.16e-34 125
Msa0804140 MtrunA17_Chr6g0454291 43.200 125 70 1 18 141 352 476 1.27e-34 125
Msa0804140 MtrunA17_Chr6g0454151 43.902 123 68 1 18 139 353 475 2.19e-34 124
Msa0804140 MtrunA17_Chr6g0454121 44.715 123 67 1 18 139 354 476 5.44e-34 123
Msa0804140 MtrunA17_Chr6g0453961 43.089 123 69 1 18 139 365 487 6.99e-34 123
Msa0804140 MtrunA17_Chr8g0359821 42.400 125 71 1 18 141 353 477 2.02e-33 122
Msa0804140 MtrunA17_Chr6g0454221 42.276 123 70 1 18 139 106 228 2.73e-33 119
Msa0804140 MtrunA17_Chr6g0454261 42.400 125 71 1 18 141 355 479 2.85e-33 121
Msa0804140 MtrunA17_Chr6g0454131 44.715 123 67 1 18 139 354 476 4.56e-33 121
Msa0804140 MtrunA17_Chr6g0454341 40.650 123 72 1 18 139 353 475 5.96e-33 120
Msa0804140 MtrunA17_Chr5g0426431 47.761 134 65 4 8 139 345 475 6.34e-33 120
Msa0804140 MtrunA17_Chr6g0454191 44.000 125 69 1 18 141 356 480 1.07e-32 120
Msa0804140 MtrunA17_Chr6g0452771 43.200 125 70 1 18 141 355 479 2.19e-32 119
Msa0804140 MtrunA17_Chr3g0092641 47.368 133 65 4 8 138 345 474 2.82e-32 119
Msa0804140 MtrunA17_Chr8g0336261 49.451 91 46 0 18 108 46 136 3.19e-32 111
Msa0804140 MtrunA17_Chr4g0050341 42.105 133 71 2 7 138 360 487 6.04e-32 118
Msa0804140 MtrunA17_Chr6g0454321 41.129 124 72 1 18 140 353 476 6.60e-32 119
Msa0804140 MtrunA17_Chr5g0423981 42.276 123 70 1 18 139 320 442 7.36e-32 117
Msa0804140 MtrunA17_Chr8g0355011 40.984 122 71 1 18 138 237 358 1.09e-31 115
Msa0804140 MtrunA17_Chr6g0453951 37.692 130 80 1 13 141 397 526 2.64e-31 117
Msa0804140 MtrunA17_Chr3g0118721 40.476 126 74 1 17 141 164 289 2.79e-31 113
Msa0804140 MtrunA17_Chr5g0426401 45.113 133 68 4 11 141 181 310 2.98e-31 113
Msa0804140 MtrunA17_Chr6g0454231 43.182 132 69 3 16 141 91 222 3.46e-31 115
Msa0804140 MtrunA17_Chr6g0454181 40.800 125 73 1 18 141 355 479 4.73e-31 115
Msa0804140 MtrunA17_Chr3g0112771 43.307 127 71 1 18 143 327 453 5.92e-31 115
Msa0804140 MtrunA17_Chr3g0118661 42.742 124 70 1 17 139 354 477 1.07e-30 114
Msa0804140 MtrunA17_Chr8g0380531 40.940 149 82 3 2 144 312 460 2.47e-30 113
Msa0804140 MtrunA17_Chr1g0207981 42.958 142 74 3 9 145 337 476 2.61e-30 113
Msa0804140 MtrunA17_Chr3g0118691 42.063 126 72 1 17 141 357 482 3.70e-30 113
Msa0804140 MtrunA17_Chr3g0118701 38.849 139 84 1 1 138 341 479 6.13e-30 112
Msa0804140 MtrunA17_Chr3g0118671 38.168 131 79 2 17 145 348 478 1.35e-29 111
Msa0804140 MtrunA17_Chr4g0032331 43.651 126 70 1 18 143 327 451 6.14e-29 109
Msa0804140 MtrunA17_Chr3g0118771 40.323 124 73 1 17 139 363 486 7.69e-29 109
Msa0804140 MtrunA17_Chr3g0118711 38.095 126 77 1 17 141 355 480 8.07e-29 109
Msa0804140 MtrunA17_Chr3g0112761 40.945 127 73 1 19 143 325 451 1.24e-28 108
Msa0804140 MtrunA17_Chr4g0044511 39.568 139 72 3 19 145 370 508 1.40e-28 109
Msa0804140 MtrunA17_Chr2g0278711 44.000 125 68 2 16 138 349 473 1.53e-28 108
Msa0804140 MtrunA17_Chr5g0414331 39.456 147 84 2 4 145 311 457 1.51e-27 105
Msa0804140 MtrunA17_Chr7g0250001 37.589 141 81 3 3 138 306 444 2.26e-27 105
Msa0804140 MtrunA17_Chr8g0339461 41.958 143 74 4 4 137 325 467 2.97e-27 105
Msa0804140 MtrunA17_Chr6g0464871 37.956 137 78 3 7 138 329 463 6.04e-27 104
Msa0804140 MtrunA17_Chr7g0249931 36.054 147 83 4 3 143 341 482 7.31e-27 104
Msa0804140 MtrunA17_Chr8g0339601 40.602 133 71 3 7 131 187 319 1.07e-26 102
Msa0804140 MtrunA17_Chr5g0414321 38.816 152 80 3 7 145 304 455 1.36e-26 103
Msa0804140 MtrunA17_Chr7g0265151 39.869 153 64 5 13 140 337 486 2.54e-26 102
Msa0804140 MtrunA17_Chr7g0218831 36.508 126 74 2 19 140 315 438 2.84e-26 102
Msa0804140 MtrunA17_Chr6g0464881 40.625 128 71 2 16 138 324 451 4.97e-26 101
Msa0804140 MtrunA17_Chr7g0265041 37.179 156 80 3 4 141 333 488 5.13e-26 102
Msa0804140 MtrunA17_Chr4g0066201 36.538 156 80 4 3 142 323 475 7.05e-26 101
Msa0804140 MtrunA17_Chr4g0072771 39.231 130 77 2 16 143 338 467 8.60e-26 101
Msa0804140 MtrunA17_Chr8g0366391 40.940 149 77 3 8 145 333 481 8.81e-26 101
Msa0804140 MtrunA17_Chr6g0464861 36.719 128 76 2 16 138 323 450 1.85e-25 100
Msa0804140 MtrunA17_Chr4g0066171 37.821 156 78 4 3 142 325 477 1.91e-25 100
Msa0804140 MtrunA17_Chr6g0464841 36.719 128 76 2 16 138 324 451 2.25e-25 100
Msa0804140 MtrunA17_Chr7g0265111 38.608 158 80 3 4 144 361 518 2.36e-25 100
Msa0804140 MtrunA17_Chr8g0377941 37.594 133 75 2 17 141 329 461 3.41e-25 99.8
Msa0804140 MtrunA17_Chr7g0218841 37.302 126 73 2 19 140 316 439 3.45e-25 99.4
Msa0804140 MtrunA17_Chr4g0044501 41.333 150 75 4 5 143 330 477 4.12e-25 99.4
Msa0804140 MtrunA17_Chr4g0014061 36.129 155 80 4 5 143 323 474 7.83e-25 98.6
Msa0804140 MtrunA17_Chr7g0265101 37.931 145 74 4 13 141 342 486 9.29e-25 98.6
Msa0804140 MtrunA17_Chr8g0336691 42.969 128 67 3 16 137 1248 1375 9.64e-25 99.0
Msa0804140 MtrunA17_Chr8g0336691 42.975 121 63 3 16 130 781 901 3.46e-23 94.4
Msa0804140 MtrunA17_Chr8g0336691 37.500 128 74 3 16 137 342 469 6.50e-21 87.8
Msa0804140 MtrunA17_Chr8g0373301 39.231 130 73 3 14 137 333 462 1.17e-24 98.2
Msa0804140 MtrunA17_Chr3g0122001 37.736 159 74 4 4 141 798 952 1.38e-24 98.2
Msa0804140 MtrunA17_Chr3g0122001 35.443 158 80 3 4 141 318 473 1.00e-22 93.2
Msa0804140 MtrunA17_Chr5g0419771 38.182 165 77 5 4 146 356 517 1.46e-24 98.2
Msa0804140 MtrunA17_Chr8g0339451 40.441 136 72 4 4 130 317 452 2.15e-24 97.4
Msa0804140 MtrunA17_Chr4g0072761 38.462 130 78 2 16 143 325 454 2.55e-24 97.1
Msa0804140 MtrunA17_Chr8g0339441 41.353 133 69 4 7 130 286 418 2.57e-24 97.1
Msa0804140 MtrunA17_Chr4g0053321 37.410 139 77 3 5 138 343 476 2.59e-24 97.4
Msa0804140 MtrunA17_Chr1g0179901 39.490 157 76 4 4 141 337 493 3.90e-24 96.7
Msa0804140 MtrunA17_Chr8g0382021 39.231 130 71 3 20 141 359 488 4.20e-24 96.7
Msa0804140 MtrunA17_Chr8g0377921 38.346 133 70 2 17 139 331 461 5.80e-24 96.3
Msa0804140 MtrunA17_Chr3g0098111 35.714 140 81 2 11 143 334 471 6.50e-24 95.9
Msa0804140 MtrunA17_Chr4g0066221 34.591 159 85 5 3 142 323 481 6.56e-24 95.9
Msa0804140 MtrunA17_Chr6g0464921 37.778 135 78 3 9 138 319 452 6.64e-24 95.9
Msa0804140 MtrunA17_Chr7g0218821 34.091 132 73 2 19 142 326 451 1.56e-23 94.7
Msa0804140 MtrunA17_Chr4g0053501 35.971 139 79 3 5 138 328 461 1.87e-23 94.7
Msa0804140 MtrunA17_Chr4g0011051 35.119 168 80 5 1 139 322 489 1.92e-23 94.7
Msa0804140 MtrunA17_Chr4g0066281 34.839 155 82 4 4 142 316 467 1.95e-23 94.7
Msa0804140 MtrunA17_Chr8g0336651 42.149 121 64 3 16 130 1112 1232 2.10e-23 95.1
Msa0804140 MtrunA17_Chr8g0336651 39.062 128 72 3 16 137 643 770 5.07e-21 88.2
Msa0804140 MtrunA17_Chr8g0336651 41.228 114 62 2 16 124 333 446 1.13e-20 87.0
Msa0804140 MtrunA17_Chr6g0462571 38.971 136 75 3 3 130 314 449 2.52e-23 94.4
Msa0804140 MtrunA17_Chr8g0334851 40.625 128 70 3 16 137 338 465 3.02e-23 94.4
Msa0804140 MtrunA17_Chr8g0374901 33.333 147 82 3 12 142 333 479 4.05e-23 94.0
Msa0804140 MtrunA17_Chr4g0066261 34.356 163 88 5 3 146 327 489 4.21e-23 94.0
Msa0804140 MtrunA17_Chr7g0243631 33.544 158 87 3 4 143 331 488 4.32e-23 94.0
Msa0804140 MtrunA17_Chr6g0463861 35.507 138 74 3 17 139 334 471 4.54e-23 93.6
Msa0804140 MtrunA17_Chr8g0339631 39.394 132 70 5 8 130 327 457 5.14e-23 93.6
Msa0804140 MtrunA17_Chr2g0294931 35.065 154 84 4 7 144 331 484 5.48e-23 93.6
Msa0804140 MtrunA17_Chr4g0066151 33.962 159 86 5 3 142 322 480 6.65e-23 93.2
Msa0804140 MtrunA17_Chr8g0374941 34.641 153 83 4 3 138 1262 1414 6.77e-23 93.6
Msa0804140 MtrunA17_Chr8g0374941 33.094 139 76 5 3 124 324 462 3.03e-18 80.1
Msa0804140 MtrunA17_Chr8g0374941 32.812 128 70 3 12 123 799 926 2.83e-17 77.4
Msa0804140 MtrunA17_Chr7g0218791 35.000 120 72 2 19 134 323 440 7.71e-23 92.8
Msa0804140 MtrunA17_Chr3g0121991 40.441 136 75 2 12 141 410 545 8.09e-23 93.2
Msa0804140 MtrunA17_Chr7g0265051 37.410 139 71 4 19 141 346 484 9.19e-23 92.8
Msa0804140 MtrunA17_Chr4g0066131 33.099 142 79 3 17 142 334 475 1.00e-22 92.8
Msa0804140 MtrunA17_Chr7g0265141 37.162 148 75 3 4 133 330 477 1.05e-22 92.8
Msa0804140 MtrunA17_Chr7g0218811 31.538 130 75 2 19 140 325 448 1.16e-22 92.4
Msa0804140 MtrunA17_Chr1g0207971 33.577 137 84 3 11 142 320 454 1.28e-22 92.4
Msa0804140 MtrunA17_Chr7g0275681 37.255 153 77 4 7 141 329 480 1.29e-22 92.4
Msa0804140 MtrunA17_Chr7g0249961 33.557 149 92 3 3 146 118 264 1.52e-22 90.1
Msa0804140 MtrunA17_Chr7g0243931 33.974 156 86 4 5 143 337 492 1.63e-22 92.0
Msa0804140 MtrunA17_Chr4g0044521 35.036 137 74 3 18 139 328 464 2.03e-22 91.7
Msa0804140 MtrunA17_Chr4g0060511 33.544 158 86 4 4 143 333 489 2.28e-22 91.7
Msa0804140 MtrunA17_Chr8g0374971 32.680 153 86 4 7 142 329 481 2.33e-22 91.7
Msa0804140 MtrunA17_Chr6g0463891 34.783 138 75 2 21 143 349 486 2.76e-22 91.7
Msa0804140 MtrunA17_Chr1g0207951 34.559 136 80 3 11 139 973 1106 3.38e-22 91.7
Msa0804140 MtrunA17_Chr1g0207951 32.847 137 85 2 11 142 437 571 4.14e-21 88.6
Msa0804140 MtrunA17_Chr5g0429711 38.519 135 73 4 19 145 333 465 4.17e-22 90.9
Msa0804140 MtrunA17_Chr1g0207881 35.075 134 80 1 16 142 252 385 4.35e-22 90.5
Msa0804140 MtrunA17_Chr2g0294921 34.868 152 83 3 7 142 480 631 4.84e-22 90.9
Msa0804140 MtrunA17_Chr4g0066141 34.810 158 86 4 3 143 196 353 6.11e-22 89.7
Msa0804140 MtrunA17_Chr7g0249981 34.932 146 85 4 3 143 325 465 8.28e-22 90.1
Msa0804140 MtrunA17_Chr5g0442581 38.571 140 69 5 16 141 340 476 8.40e-22 90.1
Msa0804140 MtrunA17_Chr8g0337381 39.062 128 71 3 21 143 2 127 8.72e-22 84.7
Msa0804140 MtrunA17_Chr8g0347281 39.062 128 72 3 16 137 341 468 8.94e-22 90.1
Msa0804140 MtrunA17_Chr1g0153451 39.062 128 72 3 16 137 332 459 9.90e-22 89.7
Msa0804140 MtrunA17_Chr8g0347271 40.496 121 66 3 16 130 342 462 1.11e-21 89.7
Msa0804140 MtrunA17_Chr8g0365811 34.559 136 80 3 16 143 825 959 1.21e-21 90.1
Msa0804140 MtrunA17_Chr8g0365811 35.185 108 60 3 11 111 340 444 6.29e-17 76.3
Msa0804140 MtrunA17_Chr5g0448521 35.526 152 78 6 7 141 319 467 1.28e-21 89.7
Msa0804140 MtrunA17_Chr6g0462531 38.406 138 76 4 2 130 316 453 1.54e-21 89.4
Msa0804140 MtrunA17_Chr7g0232401 40.945 127 57 4 5 118 330 451 2.25e-21 89.0
Msa0804140 MtrunA17_Chr8g0374931 32.237 152 87 3 7 142 331 482 2.30e-21 89.0
Msa0804140 MtrunA17_Chr1g0161351 35.252 139 81 2 11 142 362 498 2.99e-21 88.6
Msa0804140 MtrunA17_Chr6g0462541 38.333 120 69 2 16 130 332 451 3.66e-21 88.2
Msa0804140 MtrunA17_Chr5g0431441 35.507 138 64 3 18 138 333 462 3.94e-21 88.2
Msa0804140 MtrunA17_Chr5g0410941 32.667 150 85 3 9 142 341 490 3.96e-21 88.2
Msa0804140 MtrunA17_Chr7g0275511 37.500 128 74 3 16 137 344 471 4.06e-21 88.2
Msa0804140 MtrunA17_Chr7g0218311 33.553 152 85 4 7 142 333 484 4.72e-21 88.2
Msa0804140 MtrunA17_Chr5g0428081 33.333 159 87 4 7 146 329 487 5.86e-21 87.8
Msa0804140 MtrunA17_Chr6g0449931 40.741 108 59 2 16 118 336 443 6.27e-21 87.8
Msa0804140 MtrunA17_Chr1g0207861 33.557 149 91 2 2 143 323 470 7.49e-21 87.4
Msa0804140 MtrunA17_Chr1g0173121 35.211 142 85 2 7 141 321 462 7.61e-21 87.4
Msa0804140 MtrunA17_Chr5g0419761 48.193 83 42 1 4 85 330 412 7.63e-21 87.4
Msa0804140 MtrunA17_Chr8g0355221 30.769 156 92 4 4 143 333 488 7.74e-21 87.4
Msa0804140 MtrunA17_Chr1g0207931 33.813 139 83 3 11 142 362 498 7.90e-21 87.4
Msa0804140 MtrunA17_Chr7g0243871 33.566 143 77 3 18 143 333 474 8.55e-21 87.4
Msa0804140 MtrunA17_Chr7g0232391 35.156 128 77 3 16 137 334 461 9.63e-21 87.0
Msa0804140 MtrunA17_Chr2g0302991 37.209 129 69 3 20 139 335 460 1.21e-20 86.7
Msa0804140 MtrunA17_Chr1g0159551 33.803 142 87 2 7 141 318 459 1.25e-20 86.7
Msa0804140 MtrunA17_Chr3g0118751 34.559 136 84 3 8 139 308 442 1.48e-20 86.7
Msa0804140 MtrunA17_Chr5g0401851 31.646 158 91 3 3 143 328 485 1.71e-20 86.3
Msa0804140 MtrunA17_Chr1g0153461 35.938 128 76 3 16 137 81 208 1.75e-20 83.6
Msa0804140 MtrunA17_Chr2g0307961 37.405 131 70 4 19 141 342 468 1.77e-20 86.3
Msa0804140 MtrunA17_Chr5g0442511 32.857 140 79 3 16 142 357 494 1.78e-20 86.3
Msa0804140 MtrunA17_Chr7g0243951 33.544 158 84 5 5 143 330 485 1.90e-20 86.3
Msa0804140 MtrunA17_Chr6g0462521 34.694 147 87 4 2 139 302 448 2.09e-20 86.3
Msa0804140 MtrunA17_Chr6g0486251 36.434 129 75 3 16 137 332 460 3.57e-20 85.5
Msa0804140 MtrunA17_Chr6g0486201 36.434 129 75 3 16 137 332 460 3.57e-20 85.5
Msa0804140 MtrunA17_Chr5g0442491 33.813 139 77 3 16 141 338 474 3.68e-20 85.5
Msa0804140 MtrunA17_Chr8g0335141 37.984 129 73 3 16 137 336 464 3.84e-20 85.5
Msa0804140 MtrunA17_Chr7g0243781 30.818 159 91 3 4 143 319 477 4.01e-20 85.5
Msa0804140 MtrunA17_Chr5g0442561 35.714 140 73 5 16 141 336 472 5.21e-20 85.1
Msa0804140 MtrunA17_Chr7g0243771 31.447 159 88 4 4 143 321 477 5.36e-20 85.1
Msa0804140 MtrunA17_Chr7g0243801 31.447 159 88 4 4 143 322 478 5.92e-20 85.1
Msa0804140 MtrunA17_Chr7g0243681 32.075 159 88 4 4 143 324 481 6.67e-20 84.7
Msa0804140 MtrunA17_Chr7g0243711 32.051 156 89 4 5 143 163 318 9.61e-20 83.2
Msa0804140 MtrunA17_Chr6g0463851 32.026 153 87 3 7 142 331 483 1.10e-19 84.3
Msa0804140 MtrunA17_Chr5g0401721 35.878 131 74 3 5 130 334 459 1.18e-19 84.0
Msa0804140 MtrunA17_Chr5g0429681 40.984 122 58 4 19 131 373 489 1.38e-19 84.0
Msa0804140 MtrunA17_Chr8g0336741 53.521 71 32 1 17 86 341 411 1.38e-19 84.0
Msa0804140 MtrunA17_Chr8g0334861 33.577 137 86 1 7 138 324 460 1.58e-19 83.6
Msa0804140 MtrunA17_Chr7g0232411 35.971 139 80 4 8 137 323 461 1.72e-19 83.6
Msa0804140 MtrunA17_Chr6g0459311 50.000 72 35 1 16 86 339 410 1.77e-19 83.6
Msa0804140 MtrunA17_Chr8g0350881 31.544 149 86 3 12 144 335 483 1.83e-19 83.6
Msa0804140 MtrunA17_Chr8g0336731 52.778 72 33 1 16 86 359 430 1.89e-19 83.6
Msa0804140 MtrunA17_Chr5g0442541 34.058 138 78 3 16 141 329 465 2.12e-19 83.2
Msa0804140 MtrunA17_Chr8g0335161 35.938 128 75 3 17 137 335 462 3.05e-19 82.8
Msa0804140 MtrunA17_Chr5g0442601 32.847 137 73 5 20 141 743 875 3.21e-19 83.2
Msa0804140 MtrunA17_Chr5g0442601 46.479 71 33 2 16 81 266 336 1.30e-14 69.7
Msa0804140 MtrunA17_Chr5g0432731 33.846 130 73 2 20 138 166 293 3.50e-19 81.6
Msa0804140 MtrunA17_Chr7g0232331 36.885 122 69 3 8 121 323 444 3.80e-19 82.4
Msa0804140 MtrunA17_Chr5g0448551 36.364 99 60 1 11 106 319 417 3.83e-19 82.4
Msa0804140 MtrunA17_Chr1g0207831 32.143 140 85 2 11 142 327 464 3.86e-19 82.4
Msa0804140 MtrunA17_Chr1g0165701 31.387 137 80 2 21 143 349 485 3.90e-19 82.8
Msa0804140 MtrunA17_Chr7g0243761 33.566 143 77 5 4 143 329 456 5.80e-19 82.0
Msa0804140 MtrunA17_Chr6g0462551 36.667 120 71 2 16 130 333 452 5.88e-19 82.0
Msa0804140 MtrunA17_Chr5g0393591 31.298 131 76 2 16 145 322 439 6.31e-19 82.0
Msa0804140 MtrunA17_Chr2g0302961 33.858 127 76 2 20 139 338 463 6.76e-19 82.0
Msa0804140 MtrunA17_Chr3g0079731 35.115 131 78 3 16 139 348 478 9.42e-19 81.6
Msa0804140 MtrunA17_Chr7g0243851 33.121 157 86 4 5 143 289 444 1.31e-18 80.9
Msa0804140 MtrunA17_Chr3g0079711 33.588 131 80 3 16 139 56 186 2.19e-18 77.4
Msa0804140 MtrunA17_Chr7g0243861 31.410 156 90 4 5 143 334 489 2.33e-18 80.5
Msa0804140 MtrunA17_Chr8g0357361 48.837 86 41 3 3 87 170 253 2.59e-18 78.6
Msa0804140 MtrunA17_Chr5g0442521 31.852 135 77 3 20 141 343 475 2.75e-18 80.1
Msa0804140 MtrunA17_Chr5g0403641 37.692 130 67 5 16 134 369 495 3.16e-18 80.1
Msa0804140 MtrunA17_Chr8g0361371 47.222 72 37 1 16 86 334 405 3.76e-18 79.7
Msa0804140 MtrunA17_Chr8g0334831 47.222 72 37 1 16 86 341 412 3.79e-18 79.7
Msa0804140 MtrunA17_Chr7g0232341 39.806 103 54 3 8 102 323 425 4.61e-18 79.3
Msa0804140 MtrunA17_Chr2g0294941 42.857 84 47 1 3 85 225 308 4.85e-18 79.0
Msa0804140 MtrunA17_Chr4g0044481 49.351 77 35 2 11 83 321 397 5.76e-18 79.0
Msa0804140 MtrunA17_Chr5g0416741 30.657 137 81 2 21 143 349 485 9.03e-18 78.6
Msa0804140 MtrunA17_Chr5g0431361 34.307 137 79 3 18 143 319 455 1.50e-17 78.2
Msa0804140 MtrunA17_Chr8g0370941 34.375 128 71 4 25 141 363 488 2.12e-17 77.8
Msa0804140 MtrunA17_Chr7g0232311 37.190 121 70 3 16 130 332 452 3.14e-17 77.0
Msa0804140 MtrunA17_Chr8g0369341 32.394 142 90 3 6 142 329 469 8.74e-17 75.9
Msa0804140 MtrunA17_Chr3g0106231 34.586 133 74 3 20 141 321 451 2.26e-16 74.7
Msa0804140 MtrunA17_Chr7g0235051 30.719 153 89 4 4 139 299 451 3.93e-16 73.9
Msa0804140 MtrunA17_Chr8g0361411 53.448 58 26 1 19 75 328 385 5.43e-16 73.6
Msa0804140 MtrunA17_Chr5g0420801 31.690 142 91 3 6 142 319 459 6.97e-16 73.2
Msa0804140 MtrunA17_Chr5g0431401 32.847 137 81 2 18 143 314 450 7.19e-16 73.2
Msa0804140 MtrunA17_Chr7g0243911 31.507 146 81 5 4 136 76 215 7.81e-16 71.2
Msa0804140 MtrunA17_Chr3g0106251 32.824 131 79 2 20 141 163 293 1.75e-15 71.6
Msa0804140 MtrunA17_Chr4g0042891 31.818 132 77 4 17 139 336 463 2.15e-15 72.0
Msa0804140 MtrunA17_Chr5g0431421 32.847 137 81 2 18 143 314 450 3.02e-15 71.6
Msa0804140 MtrunA17_Chr5g0431371 32.394 142 73 3 19 143 315 450 3.96e-15 71.2
Msa0804140 MtrunA17_Chr4g0042931 34.109 129 76 4 17 138 334 460 4.27e-15 70.9
Msa0804140 MtrunA17_Chr7g0243611 41.463 82 46 2 4 83 190 271 5.15e-15 70.1
Msa0804140 MtrunA17_Chr5g0409591 37.037 81 50 1 19 98 358 438 4.66e-14 68.2
Msa0804140 MtrunA17_Chr6g0454251 61.364 44 17 0 18 61 352 395 5.31e-14 67.8
Msa0804140 MtrunA17_Chr5g0427561 33.333 84 55 1 59 141 1 84 6.22e-14 63.2
Msa0804140 MtrunA17_Chr5g0440421 49.180 61 30 1 18 77 359 419 7.24e-14 67.4
Msa0804140 MtrunA17_Chr6g0454391 30.476 105 72 1 37 141 13 116 2.39e-13 62.8
Msa0804140 MtrunA17_Chr2g0329111 42.647 68 38 1 11 77 335 402 4.48e-13 65.1
Msa0804140 MtrunA17_Chr7g0241801 35.200 125 59 5 11 133 295 399 7.72e-13 64.7
Msa0804140 MtrunA17_Chr7g0243731 42.029 69 39 1 18 85 5 73 9.61e-13 60.1
Msa0804140 MtrunA17_Chr7g0241781 36.842 114 66 4 11 119 295 407 1.35e-12 63.9
Msa0804140 MtrunA17_Chr5g0416821 28.846 156 81 6 4 143 334 475 5.87e-12 62.0
Msa0804140 MtrunA17_Chr8g0367221 43.662 71 39 1 8 77 328 398 9.04e-12 61.6
Msa0804140 MtrunA17_Chr5g0431431 44.068 59 33 0 20 78 266 324 1.20e-11 60.8
Msa0804140 MtrunA17_Chr6g0482061 31.933 119 72 4 18 129 351 467 1.76e-11 60.8
Msa0804140 MtrunA17_Chr8g0336251 42.373 59 33 1 18 75 337 395 2.52e-11 60.1
Msa0804140 MtrunA17_Chr8g0336321 42.373 59 33 1 18 75 337 395 2.64e-11 60.1
Msa0804140 MtrunA17_Chr7g0243811 36.250 80 49 2 4 81 294 373 4.61e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0804140 AT5G05900.1 49.600 125 62 1 18 141 323 447 9.73e-37 130
Msa0804140 AT3G11340.1 41.958 143 77 2 2 143 309 446 2.01e-34 124
Msa0804140 AT5G05880.1 46.457 127 67 1 18 143 324 450 3.69e-34 124
Msa0804140 AT3G46660.1 44.882 127 69 1 18 143 331 457 2.83e-33 122
Msa0804140 AT5G05890.1 44.882 127 69 1 18 143 328 454 4.35e-33 121
Msa0804140 AT5G05860.1 47.101 138 67 2 5 141 315 447 1.21e-32 120
Msa0804140 AT1G78270.1 46.377 138 65 4 16 144 352 489 4.39e-32 119
Msa0804140 AT3G46670.1 45.238 126 68 1 19 143 325 450 5.33e-32 118
Msa0804140 AT5G05870.1 45.968 124 66 1 19 141 331 454 2.71e-31 116
Msa0804140 AT1G22400.1 44.800 125 67 2 16 138 354 478 7.37e-31 115
Msa0804140 AT1G22380.1 42.969 128 71 2 16 141 353 480 2.06e-30 114
Msa0804140 AT5G17040.2 43.846 130 67 3 16 141 210 337 3.41e-30 111
Msa0804140 AT5G38010.1 42.400 125 71 1 18 141 329 453 5.11e-30 113
Msa0804140 AT5G17040.1 42.177 147 75 5 2 141 296 439 7.67e-30 112
Msa0804140 AT5G17030.1 41.007 139 77 3 8 141 317 455 4.30e-29 110
Msa0804140 AT3G46720.1 41.732 127 73 1 18 143 316 442 1.47e-28 108
Msa0804140 AT5G17050.1 41.379 145 79 4 2 141 313 456 2.17e-28 108
Msa0804140 AT5G38040.1 37.589 141 84 2 2 141 312 449 2.64e-28 108
Msa0804140 AT4G15480.1 36.735 147 86 1 2 141 332 478 3.71e-28 108
Msa0804140 AT1G22340.1 43.750 128 70 2 16 141 354 481 4.59e-28 107
Msa0804140 AT2G43820.1 36.735 147 87 2 3 143 302 448 1.14e-27 106
Msa0804140 AT2G43840.2 37.671 146 85 2 3 142 302 447 1.23e-27 106
Msa0804140 AT2G43840.1 37.671 146 85 2 3 142 302 447 1.37e-27 106
Msa0804140 AT5G59590.1 40.984 122 71 1 18 138 325 446 1.56e-27 106
Msa0804140 AT1G05680.1 47.458 118 57 2 18 130 324 441 1.99e-27 105
Msa0804140 AT1G22360.1 41.860 129 73 2 15 141 349 477 2.56e-27 105
Msa0804140 AT2G26480.1 37.500 136 84 1 7 141 310 445 4.48e-27 105
Msa0804140 AT3G46700.1 40.945 127 74 1 18 143 320 446 7.59e-27 104
Msa0804140 AT1G05675.1 43.651 126 66 2 18 138 324 449 7.86e-27 104
Msa0804140 AT3G46690.1 40.945 127 74 1 18 143 325 451 9.08e-27 103
Msa0804140 AT3G46680.1 42.623 122 69 1 18 138 325 446 1.43e-26 103
Msa0804140 AT4G15550.1 37.692 130 73 1 18 139 342 471 4.63e-26 102
Msa0804140 AT2G31790.1 38.400 125 72 2 11 130 321 445 4.71e-26 102
Msa0804140 AT1G05560.1 40.000 140 75 2 6 141 317 451 6.99e-26 101
Msa0804140 AT1G05560.2 40.000 140 75 2 6 141 367 501 8.54e-26 102
Msa0804140 AT5G59580.1 36.508 126 79 1 18 142 323 448 1.43e-25 100
Msa0804140 AT4G34138.1 40.541 148 76 3 2 139 331 476 1.68e-25 100
Msa0804140 AT3G53160.1 36.842 152 75 3 13 145 337 486 1.87e-25 100
Msa0804140 AT1G05530.1 39.286 140 76 2 6 141 320 454 2.78e-25 100
Msa0804140 AT2G31750.1 38.168 131 74 2 18 141 324 454 3.28e-25 99.8
Msa0804140 AT2G31750.2 38.168 131 74 2 18 141 324 454 3.54e-25 100
Msa0804140 AT3G02100.1 38.889 126 72 2 22 143 337 461 3.69e-25 99.8
Msa0804140 AT3G55710.1 39.062 128 75 2 18 143 330 456 4.20e-25 99.8
Msa0804140 AT2G36760.1 35.484 155 80 3 11 145 342 496 5.09e-25 99.8
Msa0804140 AT2G15490.1 37.762 143 78 4 7 139 337 478 8.95e-25 99.0
Msa0804140 AT2G15490.3 37.762 143 78 4 7 139 334 475 9.19e-25 99.0
Msa0804140 AT1G22370.1 42.188 128 72 2 16 141 178 305 1.16e-24 96.7
Msa0804140 AT5G26310.1 42.636 129 61 5 16 134 335 460 1.77e-24 98.2
Msa0804140 AT3G55700.1 37.795 127 78 1 18 143 326 452 2.12e-24 97.8
Msa0804140 AT1G30530.1 42.188 128 72 2 16 141 323 450 3.10e-24 97.1
Msa0804140 AT1G22360.2 40.625 128 64 3 15 141 349 465 3.33e-24 97.1
Msa0804140 AT2G36780.1 36.301 146 76 3 13 141 343 488 3.61e-24 97.1
Msa0804140 AT2G23260.1 36.154 130 77 3 11 134 317 446 3.66e-24 97.1
Msa0804140 AT2G36790.1 36.986 146 75 4 13 141 342 487 6.58e-24 96.7
Msa0804140 AT1G22370.2 42.188 128 72 2 16 141 348 475 7.56e-24 96.3
Msa0804140 AT2G23250.1 36.913 149 87 4 3 144 290 438 1.07e-23 95.5
Msa0804140 AT2G36750.1 36.620 142 73 3 17 141 342 483 1.87e-23 95.1
Msa0804140 AT2G36770.1 34.211 152 79 4 13 143 343 494 2.79e-23 94.7
Msa0804140 AT2G15480.1 34.483 145 86 2 4 139 334 478 3.75e-23 94.4
Msa0804140 AT3G46650.1 38.400 125 76 1 18 141 308 432 4.39e-23 94.0
Msa0804140 AT2G36800.1 34.932 146 78 3 13 141 342 487 1.11e-22 93.2
Msa0804140 AT1G24100.1 36.913 149 85 3 2 141 310 458 2.16e-22 92.0
Msa0804140 AT4G15490.1 34.667 150 78 3 1 139 324 464 2.68e-22 92.0
Msa0804140 AT4G15500.1 36.154 130 76 1 17 139 331 460 3.13e-22 91.7
Msa0804140 AT2G15480.2 32.258 155 86 2 4 139 334 488 3.69e-22 91.7
Msa0804140 AT5G66690.1 41.085 129 63 5 16 134 335 460 4.59e-22 91.3
Msa0804140 AT4G36770.1 40.000 115 64 3 16 125 333 447 5.16e-22 90.9
Msa0804140 AT3G50740.1 37.500 144 71 6 16 142 340 481 1.30e-21 90.1
Msa0804140 AT2G30140.2 35.374 147 83 3 8 145 311 454 1.34e-21 89.7
Msa0804140 AT2G30140.1 35.374 147 83 3 8 145 312 455 1.42e-21 89.7
Msa0804140 AT2G29730.1 30.882 136 86 1 19 146 332 467 2.35e-21 89.4
Msa0804140 AT2G29710.1 32.237 152 93 3 2 144 315 465 2.35e-21 89.4
Msa0804140 AT5G14860.1 40.146 137 72 5 13 139 337 473 7.67e-21 87.8
Msa0804140 AT4G34131.1 33.987 153 89 4 2 143 330 481 1.42e-20 87.0
Msa0804140 AT1G01420.1 40.870 115 60 3 16 124 336 448 1.79e-20 86.7
Msa0804140 AT3G21560.1 34.722 144 83 3 3 139 331 470 1.90e-20 86.7
Msa0804140 AT2G36970.1 35.115 131 82 2 16 143 342 472 2.42e-20 86.3
Msa0804140 AT1G01420.2 40.870 115 60 3 16 124 339 451 4.02e-20 85.9
Msa0804140 AT3G16520.3 36.879 141 80 4 5 139 320 457 6.25e-20 85.1
Msa0804140 AT4G14090.1 34.028 144 85 4 3 139 313 453 7.86e-20 84.7
Msa0804140 AT1G07250.1 37.778 135 69 2 7 130 331 461 2.79e-19 83.6
Msa0804140 AT3G53150.1 33.333 171 73 5 7 141 348 513 2.99e-19 83.2
Msa0804140 AT4G34135.1 37.162 148 81 3 8 143 336 483 3.12e-19 83.2
Msa0804140 AT4G01070.1 37.190 121 70 3 16 130 336 456 4.33e-19 82.8
Msa0804140 AT3G16520.1 45.238 84 45 1 5 87 320 403 8.51e-19 82.0
Msa0804140 AT3G16520.2 45.238 84 45 1 5 87 320 403 9.46e-19 81.6
Msa0804140 AT2G18570.1 35.385 130 71 5 16 134 332 459 1.03e-18 81.6
Msa0804140 AT2G30150.1 34.965 143 81 3 8 141 297 436 1.25e-18 81.3
Msa0804140 AT2G30150.2 34.965 143 81 3 8 141 313 452 1.61e-18 81.3
Msa0804140 AT2G28080.1 36.752 117 70 3 4 116 333 449 5.16e-18 79.7
Msa0804140 AT1G73880.1 33.077 130 81 3 19 143 340 468 7.10e-18 79.3
Msa0804140 AT2G29740.1 34.167 120 70 2 20 131 346 464 1.63e-17 78.2
Msa0804140 AT1G01390.2 53.968 63 28 1 16 77 353 415 1.65e-17 78.2
Msa0804140 AT2G16890.2 34.586 133 77 4 17 139 333 465 1.67e-17 78.2
Msa0804140 AT1G07260.1 36.296 135 71 3 16 139 339 469 1.73e-17 78.2
Msa0804140 AT1G01390.1 53.968 63 28 1 16 77 336 398 1.97e-17 78.2
Msa0804140 AT2G18560.1 33.594 128 76 4 16 134 242 369 4.48e-17 76.6
Msa0804140 AT3G22250.1 35.922 103 64 2 16 117 339 440 4.66e-17 77.0
Msa0804140 AT1G06000.1 30.769 130 86 2 13 138 301 430 8.92e-17 76.3
Msa0804140 AT2G29750.1 34.646 127 63 3 18 131 344 463 9.88e-17 76.3
Msa0804140 AT4G15260.1 31.250 160 87 4 1 139 195 352 2.13e-16 74.7
Msa0804140 AT3G21790.1 30.714 140 81 3 16 141 341 478 5.39e-16 73.9
Msa0804140 AT3G21800.1 47.059 85 40 2 5 86 324 406 7.00e-16 73.6
Msa0804140 AT4G15280.1 30.370 135 83 1 16 139 337 471 7.26e-16 73.6
Msa0804140 AT4G15280.2 30.370 135 83 1 16 139 369 503 7.86e-16 73.6
Msa0804140 AT2G16890.3 50.000 68 33 1 17 83 333 400 7.93e-16 73.6
Msa0804140 AT3G21760.1 45.833 72 39 0 16 87 344 415 1.16e-15 73.2
Msa0804140 AT1G07240.1 35.385 130 65 4 16 130 339 464 1.20e-15 73.2
Msa0804140 AT3G21750.1 37.000 100 63 0 16 115 332 431 4.38e-15 71.2
Msa0804140 AT5G12890.1 33.557 149 82 7 5 139 334 479 2.18e-14 69.3
Msa0804140 AT1G10400.1 33.333 129 78 4 18 138 331 459 3.74e-14 68.6
Msa0804140 AT3G21780.1 42.254 71 41 0 16 86 332 402 6.35e-14 68.2
Msa0804140 AT5G65550.1 45.714 70 36 2 17 85 332 400 3.84e-13 65.9
Msa0804140 AT1G51210.1 35.455 110 66 2 13 117 324 433 9.48e-13 64.7
Msa0804140 AT5G03490.1 31.852 135 82 4 13 139 328 460 1.23e-12 64.3
Msa0804140 AT5G49690.1 37.037 108 61 4 17 118 325 431 6.53e-12 62.4

Find 39 sgRNAs with CRISPR-Local

Find 45 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGATTTGCTTGAGTATATA+AGG 0.294786 5_3:+19703506 Msa0804140:CDS
CCAAACATGGTACAAGAAAA+AGG 0.313624 5_3:+19703097 None:intergenic
ATAGATTTGTAAGTGAGATT+TGG 0.333777 5_3:+19703317 Msa0804140:CDS
TGTTAGATCAGCAATGGATA+TGG 0.357787 5_3:+19703429 Msa0804140:CDS
GTGGTGTGCCTATGATTTGT+TGG 0.376618 5_3:+19703266 Msa0804140:CDS
CAAATCTTGAAAGTTGTTGT+AGG 0.383686 5_3:-19703491 None:intergenic
TAGGAAGGTTGTGGAGAATA+TGG 0.397037 5_3:+19703372 Msa0804140:CDS
CTTACAAATCTATTGTTAAG+TGG 0.424152 5_3:-19703307 None:intergenic
ACCACCAGGACTCACACTCT+TGG 0.441655 5_3:-19703464 None:intergenic
GAAAGGGATGATTGTGGGGT+GGG 0.454518 5_3:+19703156 Msa0804140:CDS
AAATAAGGCCAACAAATCAT+AGG 0.459700 5_3:-19703274 None:intergenic
GTAAGTGAGATTTGGAAGCT+TGG 0.460976 5_3:+19703325 Msa0804140:CDS
TGAGATTTGGAAGCTTGGAT+TGG 0.464560 5_3:+19703330 Msa0804140:CDS
GAATATGGTGAATGATGTTA+TGG 0.469748 5_3:+19703387 Msa0804140:CDS
AAAGAGAAAGGGATGATTGT+GGG 0.472351 5_3:+19703151 Msa0804140:CDS
AGCAATGGATATGGCTAAGT+TGG 0.475852 5_3:+19703438 Msa0804140:CDS
TGAATGATGTTATGGTGAAT+AGG 0.487988 5_3:+19703395 Msa0804140:CDS
GAAGGGACTACTAAAGAGAA+AGG 0.498754 5_3:+19703139 Msa0804140:CDS
ACTTTGGAGAGTGTGGTTTG+TGG 0.513568 5_3:+19703247 Msa0804140:CDS
ATATGAAAGATGTTTGTGAT+AGG 0.519622 5_3:+19703353 Msa0804140:CDS
TAGTGGATGGAATTCTACTT+TGG 0.524583 5_3:+19703231 Msa0804140:CDS
TGGGACAAAACTTCCTCTTG+TGG 0.547280 5_3:-19703181 None:intergenic
GCATCCAAGAGTGTGAGTCC+TGG 0.552305 5_3:+19703460 Msa0804140:CDS
GGAGTTTGTTAGATCAGCAA+TGG 0.553635 5_3:+19703423 Msa0804140:CDS
CTGTTGAAGGAGCTTGAGGA+AGG 0.553988 5_3:+19703121 Msa0804140:CDS
GAAAGATGTTTGTGATAGGA+AGG 0.556083 5_3:+19703357 Msa0804140:CDS
TGTTTGTGATAGGAAGGTTG+TGG 0.560134 5_3:+19703363 Msa0804140:CDS
GAATTCTACTTTGGAGAGTG+TGG 0.566333 5_3:+19703240 Msa0804140:CDS
TAAAGAGAAAGGGATGATTG+TGG 0.571564 5_3:+19703150 Msa0804140:CDS
TCCAAGAGTGTGAGTCCTGG+TGG 0.586272 5_3:+19703463 Msa0804140:CDS
AGAAAGGGATGATTGTGGGG+TGG 0.586735 5_3:+19703155 Msa0804140:CDS
TGTGGGGTGGGTTCCACAAG+AGG 0.592500 5_3:+19703168 Msa0804140:CDS
TGATGTTATGGTGAATAGGA+AGG 0.594905 5_3:+19703399 Msa0804140:CDS
AAGGGACTACTAAAGAGAAA+GGG 0.595105 5_3:+19703140 Msa0804140:CDS
TGTTGAAGGAGCTTGAGGAA+GGG 0.597311 5_3:+19703122 Msa0804140:CDS
AAGAGAAAGGGATGATTGTG+GGG 0.603887 5_3:+19703152 Msa0804140:CDS
TGTTATGGTGAATAGGAAGG+AGG 0.604401 5_3:+19703402 Msa0804140:CDS
AGGACTGTTGAAGGAGCTTG+AGG 0.615182 5_3:+19703117 Msa0804140:CDS
TTGTTGTAGGAAGAACCACC+AGG 0.693167 5_3:-19703478 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! CTTACAAATCTATTGTTAAG+TGG - chr5_3:19703310-19703329 None:intergenic 25.0%
! ATAGATTTGTAAGTGAGATT+TGG + chr5_3:19703317-19703336 Msa0804140:CDS 25.0%
! ATATGAAAGATGTTTGTGAT+AGG + chr5_3:19703353-19703372 Msa0804140:CDS 25.0%
!! AAGATTTGCTTGAGTATATA+AGG + chr5_3:19703506-19703525 Msa0804140:CDS 25.0%
AAAAACACCAATTGCTTTGT+GGG - chr5_3:19703203-19703222 None:intergenic 30.0%
AAAAAACACCAATTGCTTTG+TGG - chr5_3:19703204-19703223 None:intergenic 30.0%
!!! TTTTTTTGACACATAGTGGA+TGG + chr5_3:19703218-19703237 Msa0804140:CDS 30.0%
AAATAAGGCCAACAAATCAT+AGG - chr5_3:19703277-19703296 None:intergenic 30.0%
AGTGGTTGATCAGAAAAATA+AGG - chr5_3:19703292-19703311 None:intergenic 30.0%
GAATATGGTGAATGATGTTA+TGG + chr5_3:19703387-19703406 Msa0804140:CDS 30.0%
TGAATGATGTTATGGTGAAT+AGG + chr5_3:19703395-19703414 Msa0804140:CDS 30.0%
CAAATCTTGAAAGTTGTTGT+AGG - chr5_3:19703494-19703513 None:intergenic 30.0%
ACAAGAAAAAGGACTGTTGA+AGG + chr5_3:19703108-19703127 Msa0804140:CDS 35.0%
AAGGGACTACTAAAGAGAAA+GGG + chr5_3:19703140-19703159 Msa0804140:CDS 35.0%
TAAAGAGAAAGGGATGATTG+TGG + chr5_3:19703150-19703169 Msa0804140:CDS 35.0%
AAAGAGAAAGGGATGATTGT+GGG + chr5_3:19703151-19703170 Msa0804140:CDS 35.0%
!!! GGTGTTTTTTTGACACATAG+TGG + chr5_3:19703214-19703233 Msa0804140:CDS 35.0%
! TAGTGGATGGAATTCTACTT+TGG + chr5_3:19703231-19703250 Msa0804140:CDS 35.0%
GAAAGATGTTTGTGATAGGA+AGG + chr5_3:19703357-19703376 Msa0804140:CDS 35.0%
TGATGTTATGGTGAATAGGA+AGG + chr5_3:19703399-19703418 Msa0804140:CDS 35.0%
TGTTAGATCAGCAATGGATA+TGG + chr5_3:19703429-19703448 Msa0804140:CDS 35.0%
GAAGGGACTACTAAAGAGAA+AGG + chr5_3:19703139-19703158 Msa0804140:CDS 40.0%
AAGAGAAAGGGATGATTGTG+GGG + chr5_3:19703152-19703171 Msa0804140:CDS 40.0%
! GTTTTGTCCCACAAAGCAAT+TGG + chr5_3:19703193-19703212 Msa0804140:CDS 40.0%
! GAATTCTACTTTGGAGAGTG+TGG + chr5_3:19703240-19703259 Msa0804140:CDS 40.0%
GTAAGTGAGATTTGGAAGCT+TGG + chr5_3:19703325-19703344 Msa0804140:CDS 40.0%
TGAGATTTGGAAGCTTGGAT+TGG + chr5_3:19703330-19703349 Msa0804140:CDS 40.0%
TGTTTGTGATAGGAAGGTTG+TGG + chr5_3:19703363-19703382 Msa0804140:CDS 40.0%
TAGGAAGGTTGTGGAGAATA+TGG + chr5_3:19703372-19703391 Msa0804140:CDS 40.0%
TGTTATGGTGAATAGGAAGG+AGG + chr5_3:19703402-19703421 Msa0804140:CDS 40.0%
!! GGAGTTTGTTAGATCAGCAA+TGG + chr5_3:19703423-19703442 Msa0804140:CDS 40.0%
AGCAATGGATATGGCTAAGT+TGG + chr5_3:19703438-19703457 Msa0804140:CDS 40.0%
TGTTGAAGGAGCTTGAGGAA+GGG + chr5_3:19703122-19703141 Msa0804140:CDS 45.0%
TGGGACAAAACTTCCTCTTG+TGG - chr5_3:19703184-19703203 None:intergenic 45.0%
! ACTTTGGAGAGTGTGGTTTG+TGG + chr5_3:19703247-19703266 Msa0804140:CDS 45.0%
! GTGGTGTGCCTATGATTTGT+TGG + chr5_3:19703266-19703285 Msa0804140:CDS 45.0%
TTGTTGTAGGAAGAACCACC+AGG - chr5_3:19703481-19703500 None:intergenic 45.0%
AGGACTGTTGAAGGAGCTTG+AGG + chr5_3:19703117-19703136 Msa0804140:CDS 50.0%
CTGTTGAAGGAGCTTGAGGA+AGG + chr5_3:19703121-19703140 Msa0804140:CDS 50.0%
AGAAAGGGATGATTGTGGGG+TGG + chr5_3:19703155-19703174 Msa0804140:CDS 50.0%
GAAAGGGATGATTGTGGGGT+GGG + chr5_3:19703156-19703175 Msa0804140:CDS 50.0%
! GCATCCAAGAGTGTGAGTCC+TGG + chr5_3:19703460-19703479 Msa0804140:CDS 55.0%
! TCCAAGAGTGTGAGTCCTGG+TGG + chr5_3:19703463-19703482 Msa0804140:CDS 55.0%
ACCACCAGGACTCACACTCT+TGG - chr5_3:19703467-19703486 None:intergenic 55.0%
! TGTGGGGTGGGTTCCACAAG+AGG + chr5_3:19703168-19703187 Msa0804140:CDS 60.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 19703103 19703543 19703103 ID=Msa0804140;Name=Msa0804140
chr5_3 mRNA 19703103 19703543 19703103 ID=Msa0804140-mRNA-1;Parent=Msa0804140;Name=Msa0804140-mRNA-1;_AED=0.46;_eAED=0.46;_QI=0|-1|0|1|-1|1|1|0|146
chr5_3 exon 19703103 19703543 19703103 ID=Msa0804140-mRNA-1:exon:8079;Parent=Msa0804140-mRNA-1
chr5_3 CDS 19703103 19703543 19703103 ID=Msa0804140-mRNA-1:cds;Parent=Msa0804140-mRNA-1
Gene Sequence

>Msa0804140

ATGGTACAAGAAAAAGGACTGTTGAAGGAGCTTGAGGAAGGGACTACTAAAGAGAAAGGGATGATTGTGGGGTGGGTTCCACAAGAGGAAGTTTTGTCCCACAAAGCAATTGGTGTTTTTTTGACACATAGTGGATGGAATTCTACTTTGGAGAGTGTGGTTTGTGGTGTGCCTATGATTTGTTGGCCTTATTTTTCTGATCAACCACTTAACAATAGATTTGTAAGTGAGATTTGGAAGCTTGGATTGGATATGAAAGATGTTTGTGATAGGAAGGTTGTGGAGAATATGGTGAATGATGTTATGGTGAATAGGAAGGAGGAGTTTGTTAGATCAGCAATGGATATGGCTAAGTTGGCATCCAAGAGTGTGAGTCCTGGTGGTTCTTCCTACAACAACTTTCAAGATTTGCTTGAGTATATAAGGTCTACTAGCCCATAA
Protein sequence

>Msa0804140

MVQEKGLLKELEEGTTKEKGMIVGWVPQEEVLSHKAIGVFLTHSGWNSTLESVVCGVPMICWPYFSDQPLNNRFVSEIWKLGLDMKDVCDRKVVENMVNDVMVNRKEEFVRSAMDMAKLASKSVSPGGSSYNNFQDLLEYIRSTSP*