Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0810360 | XP_003615162.1 | 96.721 | 183 | 6 | 0 | 1 | 183 | 1 | 183 | 8.72e-122 | 351 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0810360 | sp|Q9S7L9|CX6B1_ARATH | 60.215 | 186 | 68 | 5 | 2 | 183 | 7 | 190 | 5.43e-57 | 180 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0810360 | G7KAG6 | 96.721 | 183 | 6 | 0 | 1 | 183 | 1 | 183 | 4.17e-122 | 351 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0810360 | Msa1241130 | 0.808825 | 2.560887e-50 | -8.615850e-47 |
| Msa0810360 | Msa1279690 | 0.997106 | 5.554871e-237 | -8.615850e-47 |
| Msa0260270 | Msa0810360 | 0.806801 | 6.893761e-50 | -8.615850e-47 |
| Msa0532810 | Msa0810360 | 0.809536 | 1.802592e-50 | -8.615850e-47 |
| Msa0559800 | Msa0810360 | 0.819083 | 1.399211e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0810360 | MtrunA17_Chr5g0426571 | 96.721 | 183 | 6 | 0 | 1 | 183 | 1 | 183 | 8.02e-126 | 351 |
| Msa0810360 | MtrunA17_Chr4g0073271 | 81.333 | 75 | 14 | 0 | 109 | 183 | 3 | 77 | 3.71e-47 | 149 |
| Msa0810360 | MtrunA17_Chr5g0400121 | 46.667 | 60 | 31 | 1 | 122 | 180 | 71 | 130 | 1.50e-18 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0810360 | AT1G22450.1 | 60.215 | 186 | 68 | 5 | 2 | 183 | 7 | 190 | 5.52e-58 | 180 |
| Msa0810360 | AT4G28060.1 | 84.000 | 75 | 12 | 0 | 109 | 183 | 4 | 78 | 4.88e-47 | 149 |
| Msa0810360 | AT5G57815.1 | 80.000 | 75 | 15 | 0 | 109 | 183 | 4 | 78 | 1.37e-45 | 145 |
| Msa0810360 | AT1G32710.1 | 47.368 | 57 | 29 | 1 | 115 | 170 | 59 | 115 | 2.43e-15 | 69.7 |
Find 80 sgRNAs with CRISPR-Local
Find 482 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAAGTTCCCCAAGTTAAAA+TGG | 0.203367 | 5_3:+38712002 | Msa0810360:three_prime_UTR |
| ATAAATGTCACCTTAATTTC+AGG | 0.274852 | 5_3:-38707576 | None:intergenic |
| TTAGCAAACTTATCGCATTC+TGG | 0.315240 | 5_3:-38707910 | None:intergenic |
| TGCTCTTTGCCCTGGCGAAT+GGG | 0.316213 | 5_3:+38707942 | Msa0810360:CDS |
| TCCACAGGAGTAGCCTCCTT+TGG | 0.353829 | 5_3:-38707387 | None:intergenic |
| AATGTTCAATGTTACACATT+TGG | 0.364487 | 5_3:+38711830 | Msa0810360:three_prime_UTR |
| TCAACTTCCTCGACTGCAAC+AGG | 0.367900 | 5_3:-38707360 | None:intergenic |
| GACAAACTTCCAAACACTTC+AGG | 0.374435 | 5_3:+38711806 | Msa0810360:three_prime_UTR |
| AGCTTGAGTTGTAAAATTGC+AGG | 0.377827 | 5_3:+38711885 | Msa0810360:three_prime_UTR |
| TGAACATTCCCTGAAGTGTT+TGG | 0.388496 | 5_3:-38711815 | None:intergenic |
| CGAAGAGAAACCTGAAATTA+AGG | 0.388584 | 5_3:+38707566 | Msa0810360:CDS |
| ATTCCCACTTACAGCGGGCC+TGG | 0.389692 | 5_3:-38711729 | None:intergenic |
| GTGCTCTTTGCCCTGGCGAA+TGG | 0.398969 | 5_3:+38707941 | Msa0810360:CDS |
| AGGGTTTAAACTCAATTTCT+GGG | 0.403190 | 5_3:-38712067 | None:intergenic |
| AAAATTGCAGGAAATGCTTC+TGG | 0.411720 | 5_3:+38711897 | Msa0810360:three_prime_UTR |
| AAAGTTCCCCAAGTTAAAAT+GGG | 0.413558 | 5_3:+38712003 | Msa0810360:three_prime_UTR |
| CTTAATTTCAGGTTTCTCTT+CGG | 0.421905 | 5_3:-38707565 | None:intergenic |
| CGCCATTGATGAAGGAAGCT+TGG | 0.423844 | 5_3:-38706213 | None:intergenic |
| TTTAACAGAGGGATTGTTGT+TGG | 0.425353 | 5_3:+38711956 | Msa0810360:three_prime_UTR |
| AACGTCCCTACCAGGTCTTC+AGG | 0.431630 | 5_3:-38712031 | None:intergenic |
| ACCACAGGGGCAGCAGGAAT+TGG | 0.431838 | 5_3:-38707438 | None:intergenic |
| AGCGAGAGTTTGAGAGGTGT+TGG | 0.433683 | 5_3:-38706243 | None:intergenic |
| ACTGTTGTCGAAGAAAATTC+TGG | 0.436657 | 5_3:+38707528 | Msa0810360:CDS |
| TTTGATTAGTAGTTGGAAAA+CGG | 0.436848 | 5_3:-38707719 | None:intergenic |
| TGCCTTGTTTGATTAGTAGT+TGG | 0.437774 | 5_3:-38707726 | None:intergenic |
| CTGCTTTCTTCAGCAACCAC+AGG | 0.440887 | 5_3:-38707453 | None:intergenic |
| AGTAAATAATAAGACATGTC+TGG | 0.440982 | 5_3:-38711928 | None:intergenic |
| TTAACAGAGGGATTGTTGTT+GGG | 0.447114 | 5_3:+38711957 | Msa0810360:three_prime_UTR |
| ACCGATGATATTCAATGTAT+CGG | 0.454130 | 5_3:-38707758 | None:intergenic |
| TTCCCACTTACAGCGGGCCT+GGG | 0.456685 | 5_3:-38711728 | None:intergenic |
| TGGAATGAGCAACGTGAGAA+TGG | 0.466781 | 5_3:+38711699 | Msa0810360:CDS |
| GCGAGAGTTTGAGAGGTGTT+GGG | 0.466889 | 5_3:-38706242 | None:intergenic |
| GTTGGAAAACGGAAATCTAC+TGG | 0.475723 | 5_3:-38707708 | None:intergenic |
| ATTGATGAAGGAAGCTTGGT+TGG | 0.484078 | 5_3:-38706209 | None:intergenic |
| ACAAACTTCCAAACACTTCA+GGG | 0.493429 | 5_3:+38711807 | Msa0810360:three_prime_UTR |
| TTGATGAAGGAAGCTTGGTT+GGG | 0.493583 | 5_3:-38706208 | None:intergenic |
| ATTCCCAGGCCCGCTGTAAG+TGG | 0.502323 | 5_3:+38711725 | Msa0810360:exon |
| TGATGTTTGGTGGTGTGTGT+TGG | 0.503136 | 5_3:-38706160 | None:intergenic |
| GAAATACATACCCATTCGCC+AGG | 0.503273 | 5_3:-38707952 | None:intergenic |
| GTGCAGATGCGTAGCTGCAA+AGG | 0.504908 | 5_3:+38707876 | Msa0810360:intron |
| AACCAAGCTTCCTTCATCAA+TGG | 0.505437 | 5_3:+38706211 | Msa0810360:exon |
| CCGATGATATTCAATGTATC+GGG | 0.509191 | 5_3:-38707757 | None:intergenic |
| TATTATCGTGCTCTTTGCCC+TGG | 0.512644 | 5_3:+38707934 | Msa0810360:CDS |
| CCCGATACATTGAATATCAT+CGG | 0.512705 | 5_3:+38707757 | Msa0810360:CDS |
| GGAGTTTCCGCCATTGATGA+AGG | 0.514863 | 5_3:-38706221 | None:intergenic |
| CGTGAGAATGGAACATTCCC+AGG | 0.527385 | 5_3:+38711711 | Msa0810360:CDS |
| AGAACAGAGAATGTGATGTT+TGG | 0.527798 | 5_3:-38706173 | None:intergenic |
| GTTCTTTCAACGTCCCTACC+AGG | 0.529995 | 5_3:-38712039 | None:intergenic |
| TTCTCAACAACAGCTTCCAC+AGG | 0.531965 | 5_3:-38707402 | None:intergenic |
| TCAGCAACCACAGGGGCAGC+AGG | 0.538575 | 5_3:-38707444 | None:intergenic |
| AGTGAATAGCACATCTATCT+CGG | 0.541527 | 5_3:-38711756 | None:intergenic |
| TGCAGATGCGTAGCTGCAAA+GGG | 0.545008 | 5_3:+38707877 | Msa0810360:intron |
| TGCTTTCTTCAGCAACCACA+GGG | 0.546805 | 5_3:-38707452 | None:intergenic |
| AAGCTTGGTTGGGCGGCTGT+AGG | 0.552607 | 5_3:-38706198 | None:intergenic |
| TTCTTCAACAGCAGGAGGGG+TGG | 0.556491 | 5_3:-38707481 | None:intergenic |
| GACATATTCCCACTTACAGC+GGG | 0.557299 | 5_3:-38711734 | None:intergenic |
| AGAAAATTCTGGTGATCAAG+AGG | 0.560378 | 5_3:+38707539 | Msa0810360:CDS |
| GAATACCTGAAGACCTGGTA+GGG | 0.569141 | 5_3:+38712026 | Msa0810360:three_prime_UTR |
| CCGTGCATCAGGTTGACAGA+TGG | 0.572171 | 5_3:+38711679 | Msa0810360:intron |
| TGGCTGTATTCGACTCGAGA+AGG | 0.573217 | 5_3:-38706126 | None:intergenic |
| TTCCCAGGCCCGCTGTAAGT+GGG | 0.582464 | 5_3:+38711726 | Msa0810360:exon |
| ACCAATTCCTGCTGCCCCTG+TGG | 0.597419 | 5_3:+38707437 | Msa0810360:CDS |
| ATGGGGAATACCTGAAGACC+TGG | 0.597466 | 5_3:+38712021 | Msa0810360:three_prime_UTR |
| ACAGAGAATGTGATGTTTGG+TGG | 0.599865 | 5_3:-38706170 | None:intergenic |
| TGTTGAAGAAAACGCTCTAG+AGG | 0.604689 | 5_3:+38707494 | Msa0810360:CDS |
| TTTGTAGGAATACTATGTGA+AGG | 0.608539 | 5_3:+38707287 | Msa0810360:intron |
| ATGAAGGAAGCTTGGTTGGG+CGG | 0.612987 | 5_3:-38706205 | None:intergenic |
| CGAGGAAGTTGAAAAGCCAA+AGG | 0.613030 | 5_3:+38707371 | Msa0810360:CDS |
| TACCTCAGCGAGAGTTTGAG+AGG | 0.614271 | 5_3:-38706249 | None:intergenic |
| GCCAAAGGAGGCTACTCCTG+TGG | 0.618743 | 5_3:+38707386 | Msa0810360:CDS |
| GGAATACCTGAAGACCTGGT+AGG | 0.627394 | 5_3:+38712025 | Msa0810360:three_prime_UTR |
| GTGTGTTGGTGAACTTACGC+TGG | 0.642225 | 5_3:-38706146 | None:intergenic |
| CAAGCTTCCTTCATCAATGG+CGG | 0.645199 | 5_3:+38706214 | Msa0810360:exon |
| TTCCAACTACTAATCAAACA+AGG | 0.661005 | 5_3:+38707724 | Msa0810360:CDS |
| GGAAGTTGAAAAGCCAAAGG+AGG | 0.661152 | 5_3:+38707374 | Msa0810360:CDS |
| CACCTCTCAAACTCTCGCTG+AGG | 0.670845 | 5_3:+38706247 | Msa0810360:CDS |
| AAGTTCCCCAAGTTAAAATG+GGG | 0.674188 | 5_3:+38712004 | Msa0810360:three_prime_UTR |
| GGACATATTCCCACTTACAG+CGG | 0.680467 | 5_3:-38711735 | None:intergenic |
| AAATACATACCCATTCGCCA+GGG | 0.687039 | 5_3:-38707951 | None:intergenic |
| GCTTTCTTCAGCAACCACAG+GGG | 0.759939 | 5_3:-38707451 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAGTTAATTTTAATAGTATT+GGG | - | chr5_3:38706883-38706902 | None:intergenic | 10.0% |
| !!! | TTAGTTAATTTTAATAGTAT+TGG | - | chr5_3:38706884-38706903 | None:intergenic | 10.0% |
| !! | TACTATTAAAATTAACTAAA+AGG | + | chr5_3:38706885-38706904 | Msa0810360:intron | 10.0% |
| !!! | AATATTTTTTATTATCTACT+AGG | + | chr5_3:38707982-38708001 | Msa0810360:intron | 10.0% |
| !!! | TTTTTCATTCGAAAAATAAA+TGG | - | chr5_3:38706351-38706370 | None:intergenic | 15.0% |
| !! | AATGATTAATATAACTACAT+GGG | - | chr5_3:38706652-38706671 | None:intergenic | 15.0% |
| !! | AAATGATTAATATAACTACA+TGG | - | chr5_3:38706653-38706672 | None:intergenic | 15.0% |
| !! | ACTATTAAAATTAACTGAAA+AGG | - | chr5_3:38706999-38707018 | None:intergenic | 15.0% |
| !! | TAATAGTTTATAGATCAAAT+TGG | + | chr5_3:38707012-38707031 | Msa0810360:intron | 15.0% |
| !! | ATAATGTTAAATGTAACAAA+AGG | - | chr5_3:38708189-38708208 | None:intergenic | 15.0% |
| !! | TAAATATTCATGTATATCAA+TGG | + | chr5_3:38708394-38708413 | Msa0810360:intron | 15.0% |
| !! | TTAAAAAGTAAAAACTAAGA+AGG | - | chr5_3:38708438-38708457 | None:intergenic | 15.0% |
| !!! | ATTTAGTTTATTTTTTGAGA+TGG | + | chr5_3:38708544-38708563 | Msa0810360:intron | 15.0% |
| !! | AATAAGAAATTAAAATGCTT+AGG | - | chr5_3:38709058-38709077 | None:intergenic | 15.0% |
| !!! | CTAATATTTTTCTATAAATG+TGG | - | chr5_3:38710708-38710727 | None:intergenic | 15.0% |
| !! | ATTAATTAAGAAAAGATGTT+CGG | + | chr5_3:38710922-38710941 | Msa0810360:intron | 15.0% |
| !! | AGTTAATAAAAAGAAAATTC+AGG | - | chr5_3:38711475-38711494 | None:intergenic | 15.0% |
| !!! | ATTTTTATTGTGTTCTTAAA+TGG | + | chr5_3:38711537-38711556 | Msa0810360:intron | 15.0% |
| !! | TAGATAATTAGAATGACAAA+AGG | + | chr5_3:38706747-38706766 | Msa0810360:intron | 20.0% |
| !!! | GTATTGTTTTTATGAAGAAT+TGG | + | chr5_3:38707123-38707142 | Msa0810360:intron | 20.0% |
| !!! | AGTTTATGTGTTTTTTTGTT+AGG | + | chr5_3:38707160-38707179 | Msa0810360:intron | 20.0% |
| !! | TACATAATACATTAGAAAAC+TGG | - | chr5_3:38707229-38707248 | None:intergenic | 20.0% |
| !!! | CAAAAATGTTTTTGATTTGT+AGG | + | chr5_3:38707272-38707291 | Msa0810360:intron | 20.0% |
| !! | TCAAATATCAAGATATTGAA+AGG | - | chr5_3:38707661-38707680 | None:intergenic | 20.0% |
| !! | TCCAAAAAAATAAAAGTCAA+CGG | - | chr5_3:38707794-38707813 | None:intergenic | 20.0% |
| !! | TTGCAAAAAAGTTTATGATT+TGG | - | chr5_3:38708225-38708244 | None:intergenic | 20.0% |
| !!! | GCACGTTTTTTTTTTTTTTT+TGG | - | chr5_3:38708307-38708326 | None:intergenic | 20.0% |
| !! | AAAAATAAACTAAATCCAAG+TGG | - | chr5_3:38708539-38708558 | None:intergenic | 20.0% |
| !!! | CTTCACATTTTAGTAATTTT+GGG | - | chr5_3:38708587-38708606 | None:intergenic | 20.0% |
| !!! | TCTTCACATTTTAGTAATTT+TGG | - | chr5_3:38708588-38708607 | None:intergenic | 20.0% |
| !! | AAAATTACTAAAATGTGAAG+AGG | + | chr5_3:38708587-38708606 | Msa0810360:intron | 20.0% |
| !! | AAGAATTTAGGAGAAAAAAA+AGG | + | chr5_3:38708769-38708788 | Msa0810360:intron | 20.0% |
| !! | CACTTGAAAAATTGTATTAA+TGG | - | chr5_3:38709146-38709165 | None:intergenic | 20.0% |
| !!! | CATTTTCTTATATGGTATAA+TGG | + | chr5_3:38709744-38709763 | Msa0810360:intron | 20.0% |
| !!! | CTTTTCTTAATTAATATGCT+AGG | - | chr5_3:38710917-38710936 | None:intergenic | 20.0% |
| !! | ACATCACATAGATTATAATT+TGG | - | chr5_3:38711225-38711244 | None:intergenic | 20.0% |
| !! | CAAAATGATATTTGTAAAAG+AGG | - | chr5_3:38711591-38711610 | None:intergenic | 20.0% |
| !!! | ATTTACTAGATTTTTAACAG+AGG | + | chr5_3:38711944-38711963 | Msa0810360:three_prime_UTR | 20.0% |
| !!! | TTTACTAGATTTTTAACAGA+GGG | + | chr5_3:38711945-38711964 | Msa0810360:three_prime_UTR | 20.0% |
| ! | ATTGGAAATTGAGAAGTAAA+AGG | - | chr5_3:38706287-38706306 | None:intergenic | 25.0% |
| ! | ATTAAAATAAAGATCCTAGG+AGG | - | chr5_3:38706322-38706341 | None:intergenic | 25.0% |
| ! | GGAATTAAAATAAAGATCCT+AGG | - | chr5_3:38706325-38706344 | None:intergenic | 25.0% |
| ! | CATTCGAAAAATAAATGGAT+TGG | - | chr5_3:38706346-38706365 | None:intergenic | 25.0% |
| ! | GCATCAAAATAACAAAATCA+AGG | - | chr5_3:38706388-38706407 | None:intergenic | 25.0% |
| ! | AAATGTTGGCATGAAAAATT+AGG | + | chr5_3:38706474-38706493 | Msa0810360:intron | 25.0% |
| !! | ATAACATTGATTGGACAAAA+TGG | - | chr5_3:38706586-38706605 | None:intergenic | 25.0% |
| ! | ACTACATAGATAACATTGAT+TGG | - | chr5_3:38706595-38706614 | None:intergenic | 25.0% |
| ! | CAAAACTTGCAAATTAGTAT+TGG | - | chr5_3:38706782-38706801 | None:intergenic | 25.0% |
| ! | ATGGATGTGAGTATAATTTA+GGG | + | chr5_3:38706972-38706991 | Msa0810360:intron | 25.0% |
| !!! | TTATGTGTTTTTTTGTTAGG+TGG | + | chr5_3:38707163-38707182 | Msa0810360:intron | 25.0% |
| ! | TATGTAAGACTTAAAGATGA+AGG | + | chr5_3:38707243-38707262 | Msa0810360:intron | 25.0% |
| ! | ATAAATGTCACCTTAATTTC+AGG | - | chr5_3:38707579-38707598 | None:intergenic | 25.0% |
| ! | ATTTAACTGAATCATCAATC+TGG | + | chr5_3:38707597-38707616 | Msa0810360:intron | 25.0% |
| ! | TTTGATTAGTAGTTGGAAAA+CGG | - | chr5_3:38707722-38707741 | None:intergenic | 25.0% |
| !!! | ACCGTTGACTTTTATTTTTT+TGG | + | chr5_3:38707790-38707809 | Msa0810360:intron | 25.0% |
| ! | CAACGGTTAAAATATAAGAA+CGG | - | chr5_3:38707848-38707867 | None:intergenic | 25.0% |
| ! | TATCTGTAAGTAAATCTTGT+TGG | - | chr5_3:38708025-38708044 | None:intergenic | 25.0% |
| ! | CAAAAGAAAAACTAAGTTGT+AGG | - | chr5_3:38708159-38708178 | None:intergenic | 25.0% |
| !! | TTTATGATTTGGCATAAAGT+CGG | - | chr5_3:38708214-38708233 | None:intergenic | 25.0% |
| !! | AGAGGAAATTCTTCTTTTAA+GGG | + | chr5_3:38708340-38708359 | Msa0810360:intron | 25.0% |
| ! | AGTTAAAGATGATAAAGCAA+TGG | - | chr5_3:38708486-38708505 | None:intergenic | 25.0% |
| !!! | AGATTTTGAGGAAAGAATTT+AGG | + | chr5_3:38708757-38708776 | Msa0810360:intron | 25.0% |
| ! | TATGCATATTACCAAATTAG+AGG | + | chr5_3:38708884-38708903 | Msa0810360:intron | 25.0% |
| ! | TGTATTAATGGTGAAAATTC+AGG | - | chr5_3:38709134-38709153 | None:intergenic | 25.0% |
| ! | GATCATTGAATTGGTATAAA+TGG | + | chr5_3:38709550-38709569 | Msa0810360:intron | 25.0% |
| !!! | TAGAAAAATCCAGGTTTTAA+GGG | - | chr5_3:38709632-38709651 | None:intergenic | 25.0% |
| ! | ATACAGAGAATAAATTGTGT+TGG | + | chr5_3:38709930-38709949 | Msa0810360:intron | 25.0% |
| !!! | AATAAATTGTGTTGGTGTTA+GGG | + | chr5_3:38709938-38709957 | Msa0810360:intron | 25.0% |
| !!! | TATAACCAATCTTTAAGACA+TGG | + | chr5_3:38710138-38710157 | Msa0810360:intron | 25.0% |
| !!! | TTTAAGACATGGAGAAATTT+TGG | + | chr5_3:38710149-38710168 | Msa0810360:intron | 25.0% |
| ! | AAGGTTTATGTTAGAAGAAA+GGG | + | chr5_3:38710353-38710372 | Msa0810360:intron | 25.0% |
| ! | AAACACAGAACAAAAGAAAA+AGG | + | chr5_3:38710664-38710683 | Msa0810360:intron | 25.0% |
| ! | TTGAGAAACATCATCAAATT+CGG | - | chr5_3:38710731-38710750 | None:intergenic | 25.0% |
| !!! | TCACCTATTTTTTGTAGTAT+GGG | - | chr5_3:38710842-38710861 | None:intergenic | 25.0% |
| !!! | TTCACCTATTTTTTGTAGTA+TGG | - | chr5_3:38710843-38710862 | None:intergenic | 25.0% |
| ! | AATAGGTGAAAAAATTGTGA+AGG | + | chr5_3:38710853-38710872 | Msa0810360:intron | 25.0% |
| ! | ATGAGAATTGGAAATTTATC+AGG | - | chr5_3:38710993-38711012 | None:intergenic | 25.0% |
| ! | CAATGCTTAGTTAAACAAAA+GGG | - | chr5_3:38711193-38711212 | None:intergenic | 25.0% |
| !!! | CTTTTGTTTAACTAAGCATT+GGG | + | chr5_3:38711192-38711211 | Msa0810360:intron | 25.0% |
| ! | AATTGGCATTAATATTTGTG+TGG | + | chr5_3:38711286-38711305 | Msa0810360:intron | 25.0% |
| ! | ATTGGCATTAATATTTGTGT+GGG | + | chr5_3:38711287-38711306 | Msa0810360:intron | 25.0% |
| ! | GATAATTAGTAAGGACTATT+GGG | + | chr5_3:38711362-38711381 | Msa0810360:intron | 25.0% |
| ! | AAAGGAAATGCAACAAAAAA+TGG | - | chr5_3:38711416-38711435 | None:intergenic | 25.0% |
| ! | CAGTTTATGGATTCTTAAAA+AGG | - | chr5_3:38711434-38711453 | None:intergenic | 25.0% |
| ! | AATGTTCAATGTTACACATT+TGG | + | chr5_3:38711830-38711849 | Msa0810360:three_prime_UTR | 25.0% |
| ! | AGTAAATAATAAGACATGTC+TGG | - | chr5_3:38711931-38711950 | None:intergenic | 25.0% |
| !! | TGGGGAACTTTTATTATTTT+GGG | - | chr5_3:38711994-38712013 | None:intergenic | 25.0% |
| !! | TTGGGGAACTTTTATTATTT+TGG | - | chr5_3:38711995-38712014 | None:intergenic | 25.0% |
| !! | AGGAGGTATTTAAGTAGAAT+TGG | - | chr5_3:38706305-38706324 | None:intergenic | 30.0% |
| ATTCTACTTAAATACCTCCT+AGG | + | chr5_3:38706305-38706324 | Msa0810360:intron | 30.0% | |
| ATTGAAGCTAATCAAGATCT+AGG | - | chr5_3:38706428-38706447 | None:intergenic | 30.0% | |
| GTTGTTACACTTCTAAATGT+TGG | + | chr5_3:38706460-38706479 | Msa0810360:intron | 30.0% | |
| ! | TAATAGTATTGGGACCAAAT+TGG | - | chr5_3:38706873-38706892 | None:intergenic | 30.0% |
| ! | ATGGATGAGTGCATAATTTT+GGG | - | chr5_3:38706912-38706931 | None:intergenic | 30.0% |
| TAGTTTATGGACCAATTTGA+TGG | + | chr5_3:38706953-38706972 | Msa0810360:intron | 30.0% | |
| TATACTCACATCCATCAAAT+TGG | - | chr5_3:38706967-38706986 | None:intergenic | 30.0% | |
| GATGGATGTGAGTATAATTT+AGG | + | chr5_3:38706971-38706990 | Msa0810360:intron | 30.0% | |
| GCATCCAAAATGAATAATGA+CGG | - | chr5_3:38707102-38707121 | None:intergenic | 30.0% | |
| TTTGTAGGAATACTATGTGA+AGG | + | chr5_3:38707287-38707306 | Msa0810360:intron | 30.0% | |
| !! | CTTAATTTCAGGTTTCTCTT+CGG | - | chr5_3:38707568-38707587 | None:intergenic | 30.0% |
| TTCCAACTACTAATCAAACA+AGG | + | chr5_3:38707724-38707743 | Msa0810360:CDS | 30.0% | |
| ACCGATGATATTCAATGTAT+CGG | - | chr5_3:38707761-38707780 | None:intergenic | 30.0% | |
| TTTATTATCTACTAGGCACT+AGG | + | chr5_3:38707989-38708008 | Msa0810360:intron | 30.0% | |
| GCTAATGTCAAATTTCTATC+TGG | + | chr5_3:38708054-38708073 | Msa0810360:intron | 30.0% | |
| AATTGCATCATTTGCTTTGT+TGG | + | chr5_3:38708095-38708114 | Msa0810360:intron | 30.0% | |
| !!! | AAAAACGTGCTGCTTTTTTA+TGG | + | chr5_3:38708317-38708336 | Msa0810360:intron | 30.0% |
| ! | GAGAGGAAATTCTTCTTTTA+AGG | + | chr5_3:38708339-38708358 | Msa0810360:intron | 30.0% |
| !! | TTCTTCTTTTAAGGGTGTAT+AGG | + | chr5_3:38708348-38708367 | Msa0810360:intron | 30.0% |
| !! | TCTTCTTTTAAGGGTGTATA+GGG | + | chr5_3:38708349-38708368 | Msa0810360:intron | 30.0% |
| ! | AAAATGTGAAGAGGCATAAA+CGG | + | chr5_3:38708596-38708615 | Msa0810360:intron | 30.0% |
| AGGAGAAAAAAAAGGAAAAG+TGG | + | chr5_3:38708777-38708796 | Msa0810360:intron | 30.0% | |
| AAAAAAAAGGAAAAGTGGCT+CGG | + | chr5_3:38708782-38708801 | Msa0810360:intron | 30.0% | |
| GTAATATGCATAGTTGTGAA+TGG | - | chr5_3:38708876-38708895 | None:intergenic | 30.0% | |
| TGTCATTAGAAGGTTTATGT+TGG | + | chr5_3:38708988-38709007 | Msa0810360:intron | 30.0% | |
| GTCATTAGAAGGTTTATGTT+GGG | + | chr5_3:38708989-38709008 | Msa0810360:intron | 30.0% | |
| GTTTATGTTGGGAATTACTT+GGG | + | chr5_3:38709000-38709019 | Msa0810360:intron | 30.0% | |
| ATCAAGGTAATACAATTGCT+AGG | - | chr5_3:38709106-38709125 | None:intergenic | 30.0% | |
| TTAATGGTGAAAATTCAGGT+TGG | - | chr5_3:38709130-38709149 | None:intergenic | 30.0% | |
| !!! | GTTTTGAGAGTGAATACTTT+TGG | + | chr5_3:38709269-38709288 | Msa0810360:intron | 30.0% |
| GTTACATGAATTTGTAGTCA+AGG | + | chr5_3:38709325-38709344 | Msa0810360:intron | 30.0% | |
| ! | CTAGAAAAATCCAGGTTTTA+AGG | - | chr5_3:38709633-38709652 | None:intergenic | 30.0% |
| !!! | TTGAAGGGCATTTTCTTATA+TGG | + | chr5_3:38709736-38709755 | Msa0810360:intron | 30.0% |
| ACACAATCTTAGATAGTTGA+TGG | + | chr5_3:38709797-38709816 | Msa0810360:intron | 30.0% | |
| TATTAACTCCATCAATGGTT+TGG | - | chr5_3:38709913-38709932 | None:intergenic | 30.0% | |
| ! | GAATAAATTGTGTTGGTGTT+AGG | + | chr5_3:38709937-38709956 | Msa0810360:intron | 30.0% |
| !! | ATAAATTGTGTTGGTGTTAG+GGG | + | chr5_3:38709939-38709958 | Msa0810360:intron | 30.0% |
| ATGTTGGGAAATGTTTGAAT+TGG | + | chr5_3:38710069-38710088 | Msa0810360:intron | 30.0% | |
| TGTTGGGAAATGTTTGAATT+GGG | + | chr5_3:38710070-38710089 | Msa0810360:intron | 30.0% | |
| ACTTCAAAAGGATATCAAAC+AGG | - | chr5_3:38710103-38710122 | None:intergenic | 30.0% | |
| !!! | TTTGATATCCTTTTGAAGTG+AGG | + | chr5_3:38710104-38710123 | Msa0810360:intron | 30.0% |
| TTTCTCCATGTCTTAAAGAT+TGG | - | chr5_3:38710146-38710165 | None:intergenic | 30.0% | |
| GATTTAAGCATGAAGATACA+AGG | + | chr5_3:38710218-38710237 | Msa0810360:intron | 30.0% | |
| ! | TAGGATTGGATTGGATATAA+AGG | + | chr5_3:38710297-38710316 | Msa0810360:intron | 30.0% |
| ! | AGGATTGGATTGGATATAAA+GGG | + | chr5_3:38710298-38710317 | Msa0810360:intron | 30.0% |
| GTGATATGAGAACAATAGTT+TGG | + | chr5_3:38710330-38710349 | Msa0810360:intron | 30.0% | |
| TATGAGAACAATAGTTTGGA+AGG | + | chr5_3:38710334-38710353 | Msa0810360:intron | 30.0% | |
| GAAGGTTTATGTTAGAAGAA+AGG | + | chr5_3:38710352-38710371 | Msa0810360:intron | 30.0% | |
| ! | TCTCATAGTTCTGTTGTAAA+CGG | + | chr5_3:38710470-38710489 | Msa0810360:intron | 30.0% |
| !! | TACACAATGTGAGTATTGAA+GGG | - | chr5_3:38710510-38710529 | None:intergenic | 30.0% |
| !! | ATACACAATGTGAGTATTGA+AGG | - | chr5_3:38710511-38710530 | None:intergenic | 30.0% |
| TACTCACATTGTGTATAGTT+CGG | + | chr5_3:38710515-38710534 | Msa0810360:intron | 30.0% | |
| !! | AGTCATTTTCCATTCTTCAA+TGG | + | chr5_3:38710563-38710582 | Msa0810360:intron | 30.0% |
| !! | TAACATAAGGTATTGTTGAG+AGG | + | chr5_3:38710594-38710613 | Msa0810360:intron | 30.0% |
| !! | AACATAAGGTATTGTTGAGA+GGG | + | chr5_3:38710595-38710614 | Msa0810360:intron | 30.0% |
| ACAGAACAAAAGAAAAAGGA+GGG | + | chr5_3:38710668-38710687 | Msa0810360:intron | 30.0% | |
| GATGTTTCTCAATAACCAAA+TGG | + | chr5_3:38710739-38710758 | Msa0810360:intron | 30.0% | |
| TTGTAGTATGGGTACATATA+GGG | - | chr5_3:38710831-38710850 | None:intergenic | 30.0% | |
| TTTGTAGTATGGGTACATAT+AGG | - | chr5_3:38710832-38710851 | None:intergenic | 30.0% | |
| GTACCCATACTACAAAAAAT+AGG | + | chr5_3:38710836-38710855 | Msa0810360:intron | 30.0% | |
| AATATGCTAGGATTACCAAA+GGG | - | chr5_3:38710905-38710924 | None:intergenic | 30.0% | |
| TAATATGCTAGGATTACCAA+AGG | - | chr5_3:38710906-38710925 | None:intergenic | 30.0% | |
| AATTAAGAAAAGATGTTCGG+TGG | + | chr5_3:38710925-38710944 | Msa0810360:intron | 30.0% | |
| AGCTCAATTATGATGAGAAT+TGG | - | chr5_3:38711005-38711024 | None:intergenic | 30.0% | |
| ATTGAGCTATTATTTGAGTG+TGG | + | chr5_3:38711017-38711036 | Msa0810360:intron | 30.0% | |
| TTGAGCTATTATTTGAGTGT+GGG | + | chr5_3:38711018-38711037 | Msa0810360:intron | 30.0% | |
| AATGATCATTTCTTCCAAAC+AGG | + | chr5_3:38711046-38711065 | Msa0810360:intron | 30.0% | |
| CCAATGCTTAGTTAAACAAA+AGG | - | chr5_3:38711194-38711213 | None:intergenic | 30.0% | |
| !! | CCTTTTGTTTAACTAAGCAT+TGG | + | chr5_3:38711191-38711210 | Msa0810360:intron | 30.0% |
| GATTTAGAAGAGAAGATTAC+TGG | + | chr5_3:38711261-38711280 | Msa0810360:intron | 30.0% | |
| TTGGCATTAATATTTGTGTG+GGG | + | chr5_3:38711288-38711307 | Msa0810360:intron | 30.0% | |
| CAAGTTAGGGATAATTAGTA+AGG | + | chr5_3:38711353-38711372 | Msa0810360:intron | 30.0% | |
| GGATAATTAGTAAGGACTAT+TGG | + | chr5_3:38711361-38711380 | Msa0810360:intron | 30.0% | |
| ATCAAGGTGATTTCAGTTTA+TGG | - | chr5_3:38711447-38711466 | None:intergenic | 30.0% | |
| AACCAAATCAACACTTGAAT+TGG | + | chr5_3:38711510-38711529 | Msa0810360:intron | 30.0% | |
| !! | ATCCAATTCAAGTGTTGATT+TGG | - | chr5_3:38711515-38711534 | None:intergenic | 30.0% |
| !!! | GGGAACTTTTATTATTTTGG+GGG | - | chr5_3:38711992-38712011 | None:intergenic | 30.0% |
| !! | GGGGAACTTTTATTATTTTG+GGG | - | chr5_3:38711993-38712012 | None:intergenic | 30.0% |
| AAAAGTTCCCCAAGTTAAAA+TGG | + | chr5_3:38712002-38712021 | Msa0810360:three_prime_UTR | 30.0% | |
| AAAGTTCCCCAAGTTAAAAT+GGG | + | chr5_3:38712003-38712022 | Msa0810360:three_prime_UTR | 30.0% | |
| AGAACAGAGAATGTGATGTT+TGG | - | chr5_3:38706176-38706195 | None:intergenic | 35.0% | |
| CTAAGCTCAGATCTATATCA+TGG | + | chr5_3:38706546-38706565 | Msa0810360:intron | 35.0% | |
| ! | GATGGATGAGTGCATAATTT+TGG | - | chr5_3:38706913-38706932 | None:intergenic | 35.0% |
| TATGCACTCATCCATCAATT+TGG | + | chr5_3:38706917-38706936 | Msa0810360:intron | 35.0% | |
| TCCATAAACTAGATAACCGA+GGG | - | chr5_3:38706944-38706963 | None:intergenic | 35.0% | |
| ! | GTTGCCGTCATTATTCATTT+TGG | + | chr5_3:38707095-38707114 | Msa0810360:intron | 35.0% |
| CAATGATCTGAGGAAATTGA+GGG | - | chr5_3:38707206-38707225 | None:intergenic | 35.0% | |
| GGACAAACAAGAGAAAAAAG+AGG | + | chr5_3:38707308-38707327 | Msa0810360:CDS | 35.0% | |
| ACTGTTGTCGAAGAAAATTC+TGG | + | chr5_3:38707528-38707547 | Msa0810360:CDS | 35.0% | |
| AGAAAATTCTGGTGATCAAG+AGG | + | chr5_3:38707539-38707558 | Msa0810360:CDS | 35.0% | |
| CGAAGAGAAACCTGAAATTA+AGG | + | chr5_3:38707566-38707585 | Msa0810360:CDS | 35.0% | |
| AGTCTCAAGCTGGAAAATAA+TGG | - | chr5_3:38707685-38707704 | None:intergenic | 35.0% | |
| !! | TGCCTTGTTTGATTAGTAGT+TGG | - | chr5_3:38707729-38707748 | None:intergenic | 35.0% |
| CCGATGATATTCAATGTATC+GGG | - | chr5_3:38707760-38707779 | None:intergenic | 35.0% | |
| CCCGATACATTGAATATCAT+CGG | + | chr5_3:38707757-38707776 | Msa0810360:CDS | 35.0% | |
| CATCTGCACATGAATTTCAA+CGG | - | chr5_3:38707865-38707884 | None:intergenic | 35.0% | |
| TTAGCAAACTTATCGCATTC+TGG | - | chr5_3:38707913-38707932 | None:intergenic | 35.0% | |
| TTTCTATCTGGACTCTTACA+TGG | + | chr5_3:38708066-38708085 | Msa0810360:intron | 35.0% | |
| ACATGACCACTGTTGTTAAA+TGG | + | chr5_3:38708627-38708646 | Msa0810360:intron | 35.0% | |
| TCAGCACAAGAAATTTGTGA+AGG | + | chr5_3:38708674-38708693 | Msa0810360:intron | 35.0% | |
| CAGCACAAGAAATTTGTGAA+GGG | + | chr5_3:38708675-38708694 | Msa0810360:intron | 35.0% | |
| ! | TAACTTCTTTGACTTACCGT+TGG | + | chr5_3:38708827-38708846 | Msa0810360:intron | 35.0% |
| CAGAATATGGAAGAATCCAA+CGG | - | chr5_3:38708846-38708865 | None:intergenic | 35.0% | |
| ATATGCATAGTTGTGAATGG+CGG | - | chr5_3:38708873-38708892 | None:intergenic | 35.0% | |
| TATTACCAAATTAGAGGCCA+TGG | + | chr5_3:38708890-38708909 | Msa0810360:intron | 35.0% | |
| GGTTTATGTTGGGAATTACT+TGG | + | chr5_3:38708999-38709018 | Msa0810360:intron | 35.0% | |
| !! | GAAAATTCAGGTTGGTATCA+AGG | - | chr5_3:38709122-38709141 | None:intergenic | 35.0% |
| AATCTCTATTGTATGGCAAG+TGG | + | chr5_3:38709399-38709418 | Msa0810360:intron | 35.0% | |
| TTGTATGGCAAGTGGAATAA+AGG | + | chr5_3:38709407-38709426 | Msa0810360:intron | 35.0% | |
| TTCACTTGAAGTAACCACTT+AGG | + | chr5_3:38709443-38709462 | Msa0810360:intron | 35.0% | |
| TCACTTGAAGTAACCACTTA+GGG | + | chr5_3:38709444-38709463 | Msa0810360:intron | 35.0% | |
| TTGGGGATTGATCATTGAAT+TGG | + | chr5_3:38709541-38709560 | Msa0810360:intron | 35.0% | |
| GAATTGGTATAAATGGTCTG+AGG | + | chr5_3:38709557-38709576 | Msa0810360:intron | 35.0% | |
| AACAGTTGTTAAGGTTTCGT+TGG | + | chr5_3:38709580-38709599 | Msa0810360:intron | 35.0% | |
| ACAGTTGTTAAGGTTTCGTT+GGG | + | chr5_3:38709581-38709600 | Msa0810360:intron | 35.0% | |
| TATGCTAAACAACAGTCCAA+TGG | - | chr5_3:38709660-38709679 | None:intergenic | 35.0% | |
| AGCATAAAAAACAAGCTCAC+CGG | + | chr5_3:38709674-38709693 | Msa0810360:intron | 35.0% | |
| !! | TCTTAGATAGTTGATGGTCT+TGG | + | chr5_3:38709803-38709822 | Msa0810360:intron | 35.0% |
| CTCTGTATTAACTCCATCAA+TGG | - | chr5_3:38709918-38709937 | None:intergenic | 35.0% | |
| TAAATCGCATGAGAAGTTCA+AGG | + | chr5_3:38709976-38709995 | Msa0810360:intron | 35.0% | |
| !! | ACCAATTAGTGCTGGTATAT+AGG | + | chr5_3:38710012-38710031 | Msa0810360:intron | 35.0% |
| TCCTATATACCAGCACTAAT+TGG | - | chr5_3:38710016-38710035 | None:intergenic | 35.0% | |
| GTTGGGAAATGTTTGAATTG+GGG | + | chr5_3:38710071-38710090 | Msa0810360:intron | 35.0% | |
| !!! | ATATCCTTTTGAAGTGAGGA+GGG | + | chr5_3:38710108-38710127 | Msa0810360:intron | 35.0% |
| !! | CATGGAGAAATTTTGGAGAA+AGG | + | chr5_3:38710156-38710175 | Msa0810360:intron | 35.0% |
| !! | GAGAAATTTTGGAGAAAGGT+GGG | + | chr5_3:38710160-38710179 | Msa0810360:intron | 35.0% |
| !! | AGAAATTTTGGAGAAAGGTG+GGG | + | chr5_3:38710161-38710180 | Msa0810360:intron | 35.0% |
| AATTTCTTTCTCCTGGAGTT+AGG | + | chr5_3:38710257-38710276 | Msa0810360:intron | 35.0% | |
| !!! | GACTTCAGTAGTTTTAGGAT+TGG | + | chr5_3:38710283-38710302 | Msa0810360:intron | 35.0% |
| !!! | CAGTAGTTTTAGGATTGGAT+TGG | + | chr5_3:38710288-38710307 | Msa0810360:intron | 35.0% |
| ! | GGATTGGATTGGATATAAAG+GGG | + | chr5_3:38710299-38710318 | Msa0810360:intron | 35.0% |
| ! | GATTGGATTGGATATAAAGG+GGG | + | chr5_3:38710300-38710319 | Msa0810360:intron | 35.0% |
| TGGATATAAAGGGGGTAATA+TGG | + | chr5_3:38710308-38710327 | Msa0810360:intron | 35.0% | |
| TAGAAGAAAGGGAAATAGAC+TGG | + | chr5_3:38710364-38710383 | Msa0810360:intron | 35.0% | |
| AGAAGAAAGGGAAATAGACT+GGG | + | chr5_3:38710365-38710384 | Msa0810360:intron | 35.0% | |
| ATGAGAGAAATTAGAGACTC+TGG | - | chr5_3:38710456-38710475 | None:intergenic | 35.0% | |
| !! | AATGGTGCTACTGTAACATA+AGG | + | chr5_3:38710581-38710600 | Msa0810360:intron | 35.0% |
| !! | ACATAAGGTATTGTTGAGAG+GGG | + | chr5_3:38710596-38710615 | Msa0810360:intron | 35.0% |
| CACAGAACAAAAGAAAAAGG+AGG | + | chr5_3:38710667-38710686 | Msa0810360:intron | 35.0% | |
| ATATGCTAGGATTACCAAAG+GGG | - | chr5_3:38710904-38710923 | None:intergenic | 35.0% | |
| AGGGATTCATGTAGACTATT+TGG | + | chr5_3:38710948-38710967 | Msa0810360:intron | 35.0% | |
| TGAGCTATTATTTGAGTGTG+GGG | + | chr5_3:38711019-38711038 | Msa0810360:intron | 35.0% | |
| TCCAAACAGGATCTCAAATT+AGG | + | chr5_3:38711059-38711078 | Msa0810360:intron | 35.0% | |
| CCAAACAGGATCTCAAATTA+GGG | + | chr5_3:38711060-38711079 | Msa0810360:intron | 35.0% | |
| !!! | TAGGAATGTCATTTTCTCTC+GGG | - | chr5_3:38711100-38711119 | None:intergenic | 35.0% |
| CTTCTCTTCTAAATCTGATC+AGG | - | chr5_3:38711256-38711275 | None:intergenic | 35.0% | |
| ! | AGAGAAGATTACTGGCTAAT+TGG | + | chr5_3:38711269-38711288 | Msa0810360:intron | 35.0% |
| AGAGTATAAGCATGACTGTA+AGG | + | chr5_3:38711323-38711342 | Msa0810360:intron | 35.0% | |
| GAGTATAAGCATGACTGTAA+GGG | + | chr5_3:38711324-38711343 | Msa0810360:intron | 35.0% | |
| AGTATAAGCATGACTGTAAG+GGG | + | chr5_3:38711325-38711344 | Msa0810360:intron | 35.0% | |
| AACTGAAATCACCTTGATAC+AGG | + | chr5_3:38711449-38711468 | Msa0810360:intron | 35.0% | |
| !! | TCAAGTGTTGATTTGGTTGA+AGG | - | chr5_3:38711508-38711527 | None:intergenic | 35.0% |
| AGGTCAATGTTAACATTGGT+AGG | - | chr5_3:38711628-38711647 | None:intergenic | 35.0% | |
| CATGAGGTCAATGTTAACAT+TGG | - | chr5_3:38711632-38711651 | None:intergenic | 35.0% | |
| AAAACTGAGTGTTAGACATG+AGG | - | chr5_3:38711648-38711667 | None:intergenic | 35.0% | |
| AGTGAATAGCACATCTATCT+CGG | - | chr5_3:38711759-38711778 | None:intergenic | 35.0% | |
| ACAAACTTCCAAACACTTCA+GGG | + | chr5_3:38711807-38711826 | Msa0810360:three_prime_UTR | 35.0% | |
| ! | TGCAATTTTACAACTCAAGC+TGG | - | chr5_3:38711886-38711905 | None:intergenic | 35.0% |
| ! | AGCTTGAGTTGTAAAATTGC+AGG | + | chr5_3:38711885-38711904 | Msa0810360:three_prime_UTR | 35.0% |
| AAAATTGCAGGAAATGCTTC+TGG | + | chr5_3:38711897-38711916 | Msa0810360:three_prime_UTR | 35.0% | |
| TTTAACAGAGGGATTGTTGT+TGG | + | chr5_3:38711956-38711975 | Msa0810360:three_prime_UTR | 35.0% | |
| ! | TTAACAGAGGGATTGTTGTT+GGG | + | chr5_3:38711957-38711976 | Msa0810360:three_prime_UTR | 35.0% |
| AAGTTCCCCAAGTTAAAATG+GGG | + | chr5_3:38712004-38712023 | Msa0810360:three_prime_UTR | 35.0% | |
| !!! | GTATTCCCCATTTTAACTTG+GGG | - | chr5_3:38712012-38712031 | None:intergenic | 35.0% |
| !!! | GGTATTCCCCATTTTAACTT+GGG | - | chr5_3:38712013-38712032 | None:intergenic | 35.0% |
| !!! | AGGTATTCCCCATTTTAACT+TGG | - | chr5_3:38712014-38712033 | None:intergenic | 35.0% |
| ACAGAGAATGTGATGTTTGG+TGG | - | chr5_3:38706173-38706192 | None:intergenic | 40.0% | |
| TTGATGAAGGAAGCTTGGTT+GGG | - | chr5_3:38706211-38706230 | None:intergenic | 40.0% | |
| ATTGATGAAGGAAGCTTGGT+TGG | - | chr5_3:38706212-38706231 | None:intergenic | 40.0% | |
| AACCAAGCTTCCTTCATCAA+TGG | + | chr5_3:38706211-38706230 | Msa0810360:exon | 40.0% | |
| GAAGCTAATCAAGATCTAGG+AGG | - | chr5_3:38706425-38706444 | None:intergenic | 40.0% | |
| ! | ACCCTCGGTTATCTAGTTTA+TGG | + | chr5_3:38706940-38706959 | Msa0810360:intron | 40.0% |
| GTCCATAAACTAGATAACCG+AGG | - | chr5_3:38706945-38706964 | None:intergenic | 40.0% | |
| TGGTGAGAGAGTGATAGTTT+AGG | + | chr5_3:38707032-38707051 | Msa0810360:intron | 40.0% | |
| GGTGAGAGAGTGATAGTTTA+GGG | + | chr5_3:38707033-38707052 | Msa0810360:intron | 40.0% | |
| GCAATGATCTGAGGAAATTG+AGG | - | chr5_3:38707207-38707226 | None:intergenic | 40.0% | |
| AGAAAACTGGCAATGATCTG+AGG | - | chr5_3:38707216-38707235 | None:intergenic | 40.0% | |
| TGTTGAAGAAAACGCTCTAG+AGG | + | chr5_3:38707494-38707513 | Msa0810360:CDS | 40.0% | |
| GTTGGAAAACGGAAATCTAC+TGG | - | chr5_3:38707711-38707730 | None:intergenic | 40.0% | |
| AAATACATACCCATTCGCCA+GGG | - | chr5_3:38707954-38707973 | None:intergenic | 40.0% | |
| ACAATAGAAACACGCCGTTA+CGG | - | chr5_3:38708726-38708745 | None:intergenic | 40.0% | |
| ! | CGTGTTTCTATTGTGGAGTT+TGG | + | chr5_3:38708732-38708751 | Msa0810360:intron | 40.0% |
| !! | TGGAGTTTGGTGAGATTTTG+AGG | + | chr5_3:38708745-38708764 | Msa0810360:intron | 40.0% |
| ! | ACCTTCCTTTTCCTCTATTG+TGG | - | chr5_3:38708808-38708827 | None:intergenic | 40.0% |
| CACTAATATTGCAAACTGGG+CGG | - | chr5_3:38708953-38708972 | None:intergenic | 40.0% | |
| GCCCAGTTTGCAATATTAGT+GGG | + | chr5_3:38708952-38708971 | Msa0810360:intron | 40.0% | |
| CCCCACTAATATTGCAAACT+GGG | - | chr5_3:38708956-38708975 | None:intergenic | 40.0% | |
| CCCAGTTTGCAATATTAGTG+GGG | + | chr5_3:38708953-38708972 | Msa0810360:intron | 40.0% | |
| TCCCCACTAATATTGCAAAC+TGG | - | chr5_3:38708957-38708976 | None:intergenic | 40.0% | |
| !! | TGTGTGTAGGTGTCATTAGA+AGG | + | chr5_3:38708978-38708997 | Msa0810360:intron | 40.0% |
| CAATTGCTAGGATCTACAAC+AGG | - | chr5_3:38709094-38709113 | None:intergenic | 40.0% | |
| ACTTAGGATTCCATTGTTGC+AGG | - | chr5_3:38709244-38709263 | None:intergenic | 40.0% | |
| ACTCTCAAAACTCTCGACTT+AGG | - | chr5_3:38709260-38709279 | None:intergenic | 40.0% | |
| GTCAATCTCGATGAACTTCA+AGG | + | chr5_3:38709347-38709366 | Msa0810360:intron | 40.0% | |
| TCGATGAACTTCAAGGTTCA+TGG | + | chr5_3:38709354-38709373 | Msa0810360:intron | 40.0% | |
| GAACTTCAAGGTTCATGGTA+TGG | + | chr5_3:38709359-38709378 | Msa0810360:intron | 40.0% | |
| GGGGGTTAATCTCTATTGTA+TGG | + | chr5_3:38709392-38709411 | Msa0810360:intron | 40.0% | |
| TTGAAGTAACCACTTAGGGA+GGG | + | chr5_3:38709448-38709467 | Msa0810360:intron | 40.0% | |
| TTGACTCTCTTGTCTTGCAT+TGG | + | chr5_3:38709522-38709541 | Msa0810360:intron | 40.0% | |
| TGACTCTCTTGTCTTGCATT+GGG | + | chr5_3:38709523-38709542 | Msa0810360:intron | 40.0% | |
| !!! | AGGTTTTAAGGGTGAATCAC+TGG | - | chr5_3:38709621-38709640 | None:intergenic | 40.0% |
| AGTGATTCACCCTTAAAACC+TGG | + | chr5_3:38709620-38709639 | Msa0810360:intron | 40.0% | |
| ! | ATGGCACTCTAGAAAAATCC+AGG | - | chr5_3:38709641-38709660 | None:intergenic | 40.0% |
| !!! | GGATTTTTCTAGAGTGCCAT+TGG | + | chr5_3:38709641-38709660 | Msa0810360:intron | 40.0% |
| ATAAAAAACAAGCTCACCGG+TGG | + | chr5_3:38709677-38709696 | Msa0810360:intron | 40.0% | |
| TCTGTTGCACTTCATGTTGA+AGG | + | chr5_3:38709720-38709739 | Msa0810360:intron | 40.0% | |
| CTGTTGCACTTCATGTTGAA+GGG | + | chr5_3:38709721-38709740 | Msa0810360:intron | 40.0% | |
| AGTGGAAACCAAACCATTGA+TGG | + | chr5_3:38709902-38709921 | Msa0810360:intron | 40.0% | |
| ATGAGAAGTTCAAGGAGAAG+TGG | + | chr5_3:38709984-38710003 | Msa0810360:intron | 40.0% | |
| TGAGAAGTTCAAGGAGAAGT+GGG | + | chr5_3:38709985-38710004 | Msa0810360:intron | 40.0% | |
| CATATGGCAACATCCTCATA+TGG | - | chr5_3:38710046-38710065 | None:intergenic | 40.0% | |
| TATGAGGATGTTGCCATATG+AGG | + | chr5_3:38710046-38710065 | Msa0810360:intron | 40.0% | |
| ATGTTGCCATATGAGGATGT+TGG | + | chr5_3:38710053-38710072 | Msa0810360:intron | 40.0% | |
| TGTTGCCATATGAGGATGTT+GGG | + | chr5_3:38710054-38710073 | Msa0810360:intron | 40.0% | |
| CATTTCCCAACATCCTCATA+TGG | - | chr5_3:38710062-38710081 | None:intergenic | 40.0% | |
| !!! | GATATCCTTTTGAAGTGAGG+AGG | + | chr5_3:38710107-38710126 | Msa0810360:intron | 40.0% |
| !! | GGAGAAATTTTGGAGAAAGG+TGG | + | chr5_3:38710159-38710178 | Msa0810360:intron | 40.0% |
| AAGCATGAAGATACAAGGAG+TGG | + | chr5_3:38710223-38710242 | Msa0810360:intron | 40.0% | |
| AGCATGAAGATACAAGGAGT+GGG | + | chr5_3:38710224-38710243 | Msa0810360:intron | 40.0% | |
| CGATCAGAATTTCTTTCTCC+TGG | + | chr5_3:38710250-38710269 | Msa0810360:intron | 40.0% | |
| ! | GGAAGGACTTCAGTAGTTTT+AGG | + | chr5_3:38710278-38710297 | Msa0810360:intron | 40.0% |
| GAAGAAAGGGAAATAGACTG+GGG | + | chr5_3:38710366-38710385 | Msa0810360:intron | 40.0% | |
| AAGAAAGGGAAATAGACTGG+GGG | + | chr5_3:38710367-38710386 | Msa0810360:intron | 40.0% | |
| AACTCCTATCTGGTCTAATC+AGG | - | chr5_3:38710402-38710421 | None:intergenic | 40.0% | |
| GATTAGACCAGATAGGAGTT+AGG | + | chr5_3:38710402-38710421 | Msa0810360:intron | 40.0% | |
| ACAGTAGCACCATTGAAGAA+TGG | - | chr5_3:38710575-38710594 | None:intergenic | 40.0% | |
| CTTCGCTTGAATCTTGCAAA+GGG | - | chr5_3:38710627-38710646 | None:intergenic | 40.0% | |
| ACAAAAGAAAAAGGAGGGAC+AGG | + | chr5_3:38710673-38710692 | Msa0810360:intron | 40.0% | |
| GTCATGCAATCTCATTGAAC+TGG | + | chr5_3:38710784-38710803 | Msa0810360:intron | 40.0% | |
| ! | TAAGAAAAGATGTTCGGTGG+AGG | + | chr5_3:38710928-38710947 | Msa0810360:intron | 40.0% |
| ! | AAGAAAAGATGTTCGGTGGA+GGG | + | chr5_3:38710929-38710948 | Msa0810360:intron | 40.0% |
| !! | CAGGAATCATTTGCTGTGTA+GGG | - | chr5_3:38710974-38710993 | None:intergenic | 40.0% |
| !! | TCAGGAATCATTTGCTGTGT+AGG | - | chr5_3:38710975-38710994 | None:intergenic | 40.0% |
| ! | CCCTAATTTGAGATCCTGTT+TGG | - | chr5_3:38711063-38711082 | None:intergenic | 40.0% |
| GTATAAGCATGACTGTAAGG+GGG | + | chr5_3:38711326-38711345 | Msa0810360:intron | 40.0% | |
| TATAAGCATGACTGTAAGGG+GGG | + | chr5_3:38711327-38711346 | Msa0810360:intron | 40.0% | |
| AATGGCCATGTGATTCAAGA+GGG | - | chr5_3:38711398-38711417 | None:intergenic | 40.0% | |
| AAATGGCCATGTGATTCAAG+AGG | - | chr5_3:38711399-38711418 | None:intergenic | 40.0% | |
| GAAAATTCAGGCCTGTATCA+AGG | - | chr5_3:38711463-38711482 | None:intergenic | 40.0% | |
| GACAAACTTCCAAACACTTC+AGG | + | chr5_3:38711806-38711825 | Msa0810360:three_prime_UTR | 40.0% | |
| ! | TGAACATTCCCTGAAGTGTT+TGG | - | chr5_3:38711818-38711837 | None:intergenic | 40.0% |
| !! | TGATGTTTGGTGGTGTGTGT+TGG | - | chr5_3:38706163-38706182 | None:intergenic | 45.0% |
| CAAGCTTCCTTCATCAATGG+CGG | + | chr5_3:38706214-38706233 | Msa0810360:exon | 45.0% | |
| CATCCATCAATTTGGACCCT+CGG | + | chr5_3:38706925-38706944 | Msa0810360:intron | 45.0% | |
| TAACCGAGGGTCCAAATTGA+TGG | - | chr5_3:38706931-38706950 | None:intergenic | 45.0% | |
| !! | ACAGGTTTTTCGACAGCAAC+TGG | - | chr5_3:38707345-38707364 | None:intergenic | 45.0% |
| CGAGGAAGTTGAAAAGCCAA+AGG | + | chr5_3:38707371-38707390 | Msa0810360:CDS | 45.0% | |
| GGAAGTTGAAAAGCCAAAGG+AGG | + | chr5_3:38707374-38707393 | Msa0810360:CDS | 45.0% | |
| TTCTCAACAACAGCTTCCAC+AGG | - | chr5_3:38707405-38707424 | None:intergenic | 45.0% | |
| TGCTTTCTTCAGCAACCACA+GGG | - | chr5_3:38707455-38707474 | None:intergenic | 45.0% | |
| ! | GTTTTCTTCAACAGCAGGAG+GGG | - | chr5_3:38707487-38707506 | None:intergenic | 45.0% |
| ! | CGTTTTCTTCAACAGCAGGA+GGG | - | chr5_3:38707488-38707507 | None:intergenic | 45.0% |
| !! | AGAGCGTTTTCTTCAACAGC+AGG | - | chr5_3:38707492-38707511 | None:intergenic | 45.0% |
| TATTATCGTGCTCTTTGCCC+TGG | + | chr5_3:38707934-38707953 | Msa0810360:CDS | 45.0% | |
| GAAATACATACCCATTCGCC+AGG | - | chr5_3:38707955-38707974 | None:intergenic | 45.0% | |
| TCTGGACTCTTACATGGCAA+TGG | + | chr5_3:38708072-38708091 | Msa0810360:intron | 45.0% | |
| !!! | CGTGCTGCTTTTTTATGGAG+AGG | + | chr5_3:38708322-38708341 | Msa0810360:intron | 45.0% |
| CTTCATGCCTTCAACTCTTG+TGG | + | chr5_3:38708508-38708527 | Msa0810360:intron | 45.0% | |
| GGTTAAGCCACAAGAGTTGA+AGG | - | chr5_3:38708518-38708537 | None:intergenic | 45.0% | |
| ACTCTTGTGGCTTAACCACT+TGG | + | chr5_3:38708521-38708540 | Msa0810360:intron | 45.0% | |
| TGGCAGCCATTTAACAACAG+TGG | - | chr5_3:38708636-38708655 | None:intergenic | 45.0% | |
| CTGTTGTTAAATGGCTGCCA+TGG | + | chr5_3:38708636-38708655 | Msa0810360:intron | 45.0% | |
| GATTGTCAGCTATTCTGCCA+TGG | - | chr5_3:38708656-38708675 | None:intergenic | 45.0% | |
| ! | GTAACGGCGTGTTTCTATTG+TGG | + | chr5_3:38708725-38708744 | Msa0810360:intron | 45.0% |
| GCCACAATAGAGGAAAAGGA+AGG | + | chr5_3:38708804-38708823 | Msa0810360:intron | 45.0% | |
| CAGTTCCATGGCCTCTAATT+TGG | - | chr5_3:38708898-38708917 | None:intergenic | 45.0% | |
| CCAAGATCTGATCAGTTCCA+TGG | - | chr5_3:38708910-38708929 | None:intergenic | 45.0% | |
| CCATGGAACTGATCAGATCT+TGG | + | chr5_3:38708907-38708926 | Msa0810360:intron | 45.0% | |
| ACTGATCAGATCTTGGAGAC+AGG | + | chr5_3:38708914-38708933 | Msa0810360:intron | 45.0% | |
| CGCCCAGTTTGCAATATTAG+TGG | + | chr5_3:38708951-38708970 | Msa0810360:intron | 45.0% | |
| ! | TATTAGTGGGGAGTGTGTGT+AGG | + | chr5_3:38708965-38708984 | Msa0810360:intron | 45.0% |
| GGGAATTACTTGGGACTGTT+TGG | + | chr5_3:38709009-38709028 | Msa0810360:intron | 45.0% | |
| ! | TTGGGACTGTTTGGTGAGAA+TGG | + | chr5_3:38709018-38709037 | Msa0810360:intron | 45.0% |
| ! | TGGGACTGTTTGGTGAGAAT+GGG | + | chr5_3:38709019-38709038 | Msa0810360:intron | 45.0% |
| ATAACGACCATTCGAGCTCT+GGG | - | chr5_3:38709220-38709239 | None:intergenic | 45.0% | |
| CAAGGTTCATGGTATGGACA+AGG | + | chr5_3:38709365-38709384 | Msa0810360:intron | 45.0% | |
| TTCATGGTATGGACAAGGAG+AGG | + | chr5_3:38709370-38709389 | Msa0810360:intron | 45.0% | |
| TCATGGTATGGACAAGGAGA+GGG | + | chr5_3:38709371-38709390 | Msa0810360:intron | 45.0% | |
| TGGCAAGTGGAATAAAGGAG+TGG | + | chr5_3:38709412-38709431 | Msa0810360:intron | 45.0% | |
| CTTGAAGTAACCACTTAGGG+AGG | + | chr5_3:38709447-38709466 | Msa0810360:intron | 45.0% | |
| GACTCTCTTGTCTTGCATTG+GGG | + | chr5_3:38709524-38709543 | Msa0810360:intron | 45.0% | |
| GGTCTGAGGAACAGTTGTTA+AGG | + | chr5_3:38709571-38709590 | Msa0810360:intron | 45.0% | |
| GTTGTTAAGGTTTCGTTGGG+AGG | + | chr5_3:38709584-38709603 | Msa0810360:intron | 45.0% | |
| TTTCGTTGGGAGGAGTTCAA+TGG | + | chr5_3:38709594-38709613 | Msa0810360:intron | 45.0% | |
| GAATCTCTGATCTACGTCTC+TGG | - | chr5_3:38709858-38709877 | None:intergenic | 45.0% | |
| AGAGATTCACCATGAGAGAG+AGG | + | chr5_3:38709870-38709889 | Msa0810360:intron | 45.0% | |
| GAGAAGTTCAAGGAGAAGTG+GGG | + | chr5_3:38709986-38710005 | Msa0810360:intron | 45.0% | |
| ATGGCAACATCCTCATATGG+TGG | - | chr5_3:38710043-38710062 | None:intergenic | 45.0% | |
| TAGTCCCTCCTCACTTCAAA+AGG | - | chr5_3:38710115-38710134 | None:intergenic | 45.0% | |
| TAGGGCTATGGTAGGGAATA+AGG | + | chr5_3:38710186-38710205 | Msa0810360:intron | 45.0% | |
| TCTTTCTCCTGGAGTTAGGA+AGG | + | chr5_3:38710261-38710280 | Msa0810360:intron | 45.0% | |
| AAATAGACTGGGGGTTGACA+AGG | + | chr5_3:38710376-38710395 | Msa0810360:intron | 45.0% | |
| AAGGCCTGATTAGACCAGAT+AGG | + | chr5_3:38710395-38710414 | Msa0810360:intron | 45.0% | |
| CCTTCGCTTGAATCTTGCAA+AGG | - | chr5_3:38710628-38710647 | None:intergenic | 45.0% | |
| CCTTTGCAAGATTCAAGCGA+AGG | + | chr5_3:38710625-38710644 | Msa0810360:intron | 45.0% | |
| CCTACCACCTAATGCGATTT+GGG | + | chr5_3:38710762-38710781 | Msa0810360:intron | 45.0% | |
| ATGACCCAAATCGCATTAGG+TGG | - | chr5_3:38710769-38710788 | None:intergenic | 45.0% | |
| TGCATGACCCAAATCGCATT+AGG | - | chr5_3:38710772-38710791 | None:intergenic | 45.0% | |
| !! | GCAGTCTTTAGGACTTGTGA+AGG | + | chr5_3:38711122-38711141 | Msa0810360:intron | 45.0% |
| TCTAAATCTGATCAGGCGAC+AGG | - | chr5_3:38711249-38711268 | None:intergenic | 45.0% | |
| TAAGGACTATTGGGAGAGAC+TGG | + | chr5_3:38711371-38711390 | Msa0810360:intron | 45.0% | |
| AAGGACTATTGGGAGAGACT+GGG | + | chr5_3:38711372-38711391 | Msa0810360:intron | 45.0% | |
| !! | CATTGATTTGACCGTGCATC+AGG | + | chr5_3:38711668-38711687 | Msa0810360:intron | 45.0% |
| TGGAATGAGCAACGTGAGAA+TGG | + | chr5_3:38711699-38711718 | Msa0810360:CDS | 45.0% | |
| GACATATTCCCACTTACAGC+GGG | - | chr5_3:38711737-38711756 | None:intergenic | 45.0% | |
| GGACATATTCCCACTTACAG+CGG | - | chr5_3:38711738-38711757 | None:intergenic | 45.0% | |
| GAATACCTGAAGACCTGGTA+GGG | + | chr5_3:38712026-38712045 | Msa0810360:three_prime_UTR | 45.0% | |
| !! | TCTTATATTATTAATATTAT+CGG | + | chr5_3:38706679-38706698 | Msa0810360:intron | 5.0% |
| ! | TGGCTGTATTCGACTCGAGA+AGG | - | chr5_3:38706129-38706148 | None:intergenic | 50.0% |
| ! | GTGTGTTGGTGAACTTACGC+TGG | - | chr5_3:38706149-38706168 | None:intergenic | 50.0% |
| ATGAAGGAAGCTTGGTTGGG+CGG | - | chr5_3:38706208-38706227 | None:intergenic | 50.0% | |
| CGCCATTGATGAAGGAAGCT+TGG | - | chr5_3:38706216-38706235 | None:intergenic | 50.0% | |
| GGAGTTTCCGCCATTGATGA+AGG | - | chr5_3:38706224-38706243 | None:intergenic | 50.0% | |
| !! | GCGAGAGTTTGAGAGGTGTT+GGG | - | chr5_3:38706245-38706264 | None:intergenic | 50.0% |
| ! | AGCGAGAGTTTGAGAGGTGT+TGG | - | chr5_3:38706246-38706265 | None:intergenic | 50.0% |
| TACCTCAGCGAGAGTTTGAG+AGG | - | chr5_3:38706252-38706271 | None:intergenic | 50.0% | |
| TGGCGAGAGAGTGGTAGTTT+AGG | - | chr5_3:38706853-38706872 | None:intergenic | 50.0% | |
| CTACCACTCTCTCGCCAATT+TGG | + | chr5_3:38706856-38706875 | Msa0810360:intron | 50.0% | |
| CGAAAAACCTGTTGCAGTCG+AGG | + | chr5_3:38707353-38707372 | Msa0810360:CDS | 50.0% | |
| TCAACTTCCTCGACTGCAAC+AGG | - | chr5_3:38707363-38707382 | None:intergenic | 50.0% | |
| GCTTTCTTCAGCAACCACAG+GGG | - | chr5_3:38707454-38707473 | None:intergenic | 50.0% | |
| CTGCTTTCTTCAGCAACCAC+AGG | - | chr5_3:38707456-38707475 | None:intergenic | 50.0% | |
| ! | GCGTTTTCTTCAACAGCAGG+AGG | - | chr5_3:38707489-38707508 | None:intergenic | 50.0% |
| TGCAGATGCGTAGCTGCAAA+GGG | + | chr5_3:38707877-38707896 | Msa0810360:intron | 50.0% | |
| AAACACGCCGTTACGGCTTA+TGG | - | chr5_3:38708719-38708738 | None:intergenic | 50.0% | |
| CTCGGCCACAATAGAGGAAA+AGG | + | chr5_3:38708800-38708819 | Msa0810360:intron | 50.0% | |
| !! | GAATGGCGGATGGCAGAATA+TGG | - | chr5_3:38708859-38708878 | None:intergenic | 50.0% |
| ! | GCATAGTTGTGAATGGCGGA+TGG | - | chr5_3:38708869-38708888 | None:intergenic | 50.0% |
| TAACGACCATTCGAGCTCTG+GGG | - | chr5_3:38709219-38709238 | None:intergenic | 50.0% | |
| CATAACGACCATTCGAGCTC+TGG | - | chr5_3:38709221-38709240 | None:intergenic | 50.0% | |
| GGTCGTTATGCCTGCAACAA+TGG | + | chr5_3:38709231-38709250 | Msa0810360:intron | 50.0% | |
| CATGGTATGGACAAGGAGAG+GGG | + | chr5_3:38709372-38709391 | Msa0810360:intron | 50.0% | |
| ATGGTATGGACAAGGAGAGG+GGG | + | chr5_3:38709373-38709392 | Msa0810360:intron | 50.0% | |
| ATGAACAGTCCCTCCCTAAG+TGG | - | chr5_3:38709460-38709479 | None:intergenic | 50.0% | |
| TTAGGGAGGGACTGTTCATG+TGG | + | chr5_3:38709461-38709480 | Msa0810360:intron | 50.0% | |
| AAAAACAAGCTCACCGGTGG+AGG | + | chr5_3:38709680-38709699 | Msa0810360:intron | 50.0% | |
| ATCCCTCTATACTCCTCCAC+CGG | - | chr5_3:38709696-38709715 | None:intergenic | 50.0% | |
| GAATCTCTGCCTCTCTCTCA+TGG | - | chr5_3:38709882-38709901 | None:intergenic | 50.0% | |
| AGAGAGAGGCAGAGATTCAG+TGG | + | chr5_3:38709884-38709903 | Msa0810360:intron | 50.0% | |
| TGTTAGGGGATTGACGCAGA+TGG | + | chr5_3:38709953-38709972 | Msa0810360:intron | 50.0% | |
| TGGGGCTTACCAATTAGTGC+TGG | + | chr5_3:38710004-38710023 | Msa0810360:intron | 50.0% | |
| ATAGGATGCGCCACCATATG+AGG | + | chr5_3:38710030-38710049 | Msa0810360:intron | 50.0% | |
| TTTGGAGAAAGGTGGGGTCT+AGG | + | chr5_3:38710167-38710186 | Msa0810360:intron | 50.0% | |
| TTGGAGAAAGGTGGGGTCTA+GGG | + | chr5_3:38710168-38710187 | Msa0810360:intron | 50.0% | |
| CTGAAGTCCTTCCTAACTCC+AGG | - | chr5_3:38710271-38710290 | None:intergenic | 50.0% | |
| ACTGCTGCCTAACTCCTATC+TGG | - | chr5_3:38710412-38710431 | None:intergenic | 50.0% | |
| CAGCAGTTGAGCTGTTCTTG+AGG | + | chr5_3:38710425-38710444 | Msa0810360:intron | 50.0% | |
| GCATTAGGTGGTAGGCCATT+TGG | - | chr5_3:38710757-38710776 | None:intergenic | 50.0% | |
| GCCTACCACCTAATGCGATT+TGG | + | chr5_3:38710761-38710780 | Msa0810360:intron | 50.0% | |
| CCCAAATCGCATTAGGTGGT+AGG | - | chr5_3:38710765-38710784 | None:intergenic | 50.0% | |
| ! | TTACCAAAGGGGCTAGTGCT+AGG | - | chr5_3:38710893-38710912 | None:intergenic | 50.0% |
| TTTCTCTCGGGCGAATCTGA+TGG | - | chr5_3:38711088-38711107 | None:intergenic | 50.0% | |
| TGTAAGGGGGGAGACAAGTT+AGG | + | chr5_3:38711339-38711358 | Msa0810360:intron | 50.0% | |
| GTAAGGGGGGAGACAAGTTA+GGG | + | chr5_3:38711340-38711359 | Msa0810360:intron | 50.0% | |
| CCATCTGTCAACCTGATGCA+CGG | - | chr5_3:38711682-38711701 | None:intergenic | 50.0% | |
| CGTGAGAATGGAACATTCCC+AGG | + | chr5_3:38711711-38711730 | Msa0810360:CDS | 50.0% | |
| ATGGGGAATACCTGAAGACC+TGG | + | chr5_3:38712021-38712040 | Msa0810360:three_prime_UTR | 50.0% | |
| GGAATACCTGAAGACCTGGT+AGG | + | chr5_3:38712025-38712044 | Msa0810360:three_prime_UTR | 50.0% | |
| GTTCTTTCAACGTCCCTACC+AGG | - | chr5_3:38712042-38712061 | None:intergenic | 50.0% | |
| CACCTCTCAAACTCTCGCTG+AGG | + | chr5_3:38706247-38706266 | Msa0810360:CDS | 55.0% | |
| GGACCAAATTGGCGAGAGAG+TGG | - | chr5_3:38706862-38706881 | None:intergenic | 55.0% | |
| TCCACAGGAGTAGCCTCCTT+TGG | - | chr5_3:38707390-38707409 | None:intergenic | 55.0% | |
| TTCTTCAACAGCAGGAGGGG+TGG | - | chr5_3:38707484-38707503 | None:intergenic | 55.0% | |
| CTACTGGAGCAGTCTCAAGC+TGG | - | chr5_3:38707695-38707714 | None:intergenic | 55.0% | |
| GTGCAGATGCGTAGCTGCAA+AGG | + | chr5_3:38707876-38707895 | Msa0810360:intron | 55.0% | |
| TGCTCTTTGCCCTGGCGAAT+GGG | + | chr5_3:38707942-38707961 | Msa0810360:CDS | 55.0% | |
| TTGTGAAGGGATACCTGCCG+TGG | + | chr5_3:38708688-38708707 | Msa0810360:intron | 55.0% | |
| ! | AAGTGGCTCGGCCACAATAG+AGG | + | chr5_3:38708794-38708813 | Msa0810360:intron | 55.0% |
| CTCTATCCCCAGAGCTCGAA+TGG | + | chr5_3:38709210-38709229 | Msa0810360:intron | 55.0% | |
| TGGTATGGACAAGGAGAGGG+GGG | + | chr5_3:38709374-38709393 | Msa0810360:intron | 55.0% | |
| ! | TCACCGGTGGAGGAGTATAG+AGG | + | chr5_3:38709690-38709709 | Msa0810360:intron | 55.0% |
| ! | CACCGGTGGAGGAGTATAGA+GGG | + | chr5_3:38709691-38709710 | Msa0810360:intron | 55.0% |
| ! | AAAGGTGGGGTCTAGGGCTA+TGG | + | chr5_3:38710174-38710193 | Msa0810360:intron | 55.0% |
| ! | TGGGGTCTAGGGCTATGGTA+GGG | + | chr5_3:38710179-38710198 | Msa0810360:intron | 55.0% |
| CTGGGCCCTCTTGAATCACA+TGG | + | chr5_3:38711390-38711409 | Msa0810360:intron | 55.0% | |
| !! | CCGTGCATCAGGTTGACAGA+TGG | + | chr5_3:38711679-38711698 | Msa0810360:intron | 55.0% |
| AACGTCCCTACCAGGTCTTC+AGG | - | chr5_3:38712034-38712053 | None:intergenic | 55.0% | |
| AAGCTTGGTTGGGCGGCTGT+AGG | - | chr5_3:38706201-38706220 | None:intergenic | 60.0% | |
| GCCAAAGGAGGCTACTCCTG+TGG | + | chr5_3:38707386-38707405 | Msa0810360:CDS | 60.0% | |
| ACCAATTCCTGCTGCCCCTG+TGG | + | chr5_3:38707437-38707456 | Msa0810360:CDS | 60.0% | |
| ACCACAGGGGCAGCAGGAAT+TGG | - | chr5_3:38707441-38707460 | None:intergenic | 60.0% | |
| GTGCTCTTTGCCCTGGCGAA+TGG | + | chr5_3:38707941-38707960 | Msa0810360:CDS | 60.0% | |
| TACGGCTTATGGCAGCGCCA+CGG | - | chr5_3:38708708-38708727 | None:intergenic | 60.0% | |
| GGCGCTGCCATAAGCCGTAA+CGG | + | chr5_3:38708709-38708728 | Msa0810360:intron | 60.0% | |
| GCGCGCAGAACTGAAGTTGC+AGG | + | chr5_3:38709774-38709793 | Msa0810360:intron | 60.0% | |
| ! | GTGGGGTCTAGGGCTATGGT+AGG | + | chr5_3:38710178-38710197 | Msa0810360:intron | 60.0% |
| CTGCCTAGCACTAGCCCCTT+TGG | + | chr5_3:38710887-38710906 | Msa0810360:intron | 60.0% | |
| ATTCCCAGGCCCGCTGTAAG+TGG | + | chr5_3:38711725-38711744 | Msa0810360:exon | 60.0% | |
| TTCCCAGGCCCGCTGTAAGT+GGG | + | chr5_3:38711726-38711745 | Msa0810360:exon | 60.0% | |
| TTCCCACTTACAGCGGGCCT+GGG | - | chr5_3:38711731-38711750 | None:intergenic | 60.0% | |
| ATTCCCACTTACAGCGGGCC+TGG | - | chr5_3:38711732-38711751 | None:intergenic | 60.0% | |
| TCAGCAACCACAGGGGCAGC+AGG | - | chr5_3:38707447-38707466 | None:intergenic | 65.0% | |
| GCTTATGGCAGCGCCACGGC+AGG | - | chr5_3:38708704-38708723 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 38706120 | 38712074 | 38706120 | ID=Msa0810360;Name=Msa0810360 |
| chr5_3 | mRNA | 38706120 | 38712074 | 38706120 | ID=Msa0810360-mRNA-1;Parent=Msa0810360;Name=Msa0810360-mRNA-1;_AED=0.09;_eAED=0.09;_QI=110|1|1|1|0.75|1|5|331|183 |
| chr5_3 | exon | 38706120 | 38706268 | 38706120 | ID=Msa0810360-mRNA-1:exon:11772;Parent=Msa0810360-mRNA-1 |
| chr5_3 | exon | 38707294 | 38707587 | 38707294 | ID=Msa0810360-mRNA-1:exon:11773;Parent=Msa0810360-mRNA-1 |
| chr5_3 | exon | 38707696 | 38707778 | 38707696 | ID=Msa0810360-mRNA-1:exon:11774;Parent=Msa0810360-mRNA-1 |
| chr5_3 | exon | 38707882 | 38707963 | 38707882 | ID=Msa0810360-mRNA-1:exon:11775;Parent=Msa0810360-mRNA-1 |
| chr5_3 | exon | 38711690 | 38712074 | 38711690 | ID=Msa0810360-mRNA-1:exon:11776;Parent=Msa0810360-mRNA-1 |
| chr5_3 | five_prime_UTR | 38706120 | 38706229 | 38706120 | ID=Msa0810360-mRNA-1:five_prime_utr;Parent=Msa0810360-mRNA-1 |
| chr5_3 | CDS | 38706230 | 38706268 | 38706230 | ID=Msa0810360-mRNA-1:cds;Parent=Msa0810360-mRNA-1 |
| chr5_3 | CDS | 38707294 | 38707587 | 38707294 | ID=Msa0810360-mRNA-1:cds;Parent=Msa0810360-mRNA-1 |
| chr5_3 | CDS | 38707696 | 38707778 | 38707696 | ID=Msa0810360-mRNA-1:cds;Parent=Msa0810360-mRNA-1 |
| chr5_3 | CDS | 38707882 | 38707963 | 38707882 | ID=Msa0810360-mRNA-1:cds;Parent=Msa0810360-mRNA-1 |
| chr5_3 | CDS | 38711690 | 38711743 | 38711690 | ID=Msa0810360-mRNA-1:cds;Parent=Msa0810360-mRNA-1 |
| chr5_3 | three_prime_UTR | 38711744 | 38712074 | 38711744 | ID=Msa0810360-mRNA-1:three_prime_utr;Parent=Msa0810360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
