Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1279690 | XP_003615162.1 | 96.721 | 183 | 6 | 0 | 1 | 183 | 1 | 183 | 8.72e-122 | 351 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1279690 | sp|Q9S7L9|CX6B1_ARATH | 60.215 | 186 | 68 | 5 | 2 | 183 | 7 | 190 | 5.43e-57 | 180 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1279690 | G7KAG6 | 96.721 | 183 | 6 | 0 | 1 | 183 | 1 | 183 | 4.17e-122 | 351 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0810360 | Msa1279690 | 0.997106 | 5.554871e-237 | -8.615850e-47 |
| Msa1241130 | Msa1279690 | 0.803518 | 3.354711e-49 | -8.615850e-47 |
| Msa1265340 | Msa1279690 | 0.806379 | 8.466306e-50 | -8.615850e-47 |
| Msa1279690 | Msa1337290 | 0.800137 | 1.659726e-48 | -8.615850e-47 |
| Msa0260270 | Msa1279690 | 0.818277 | 2.131834e-52 | -8.615850e-47 |
| Msa0304270 | Msa1279690 | 0.805197 | 1.499254e-49 | -8.615850e-47 |
| Msa0532810 | Msa1279690 | 0.823850 | 1.109368e-53 | -8.615850e-47 |
| Msa0559800 | Msa1279690 | 0.807918 | 3.997542e-50 | -8.615850e-47 |
| Msa0942080 | Msa1279690 | 0.804612 | 1.987364e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1279690 | MtrunA17_Chr5g0426571 | 96.721 | 183 | 6 | 0 | 1 | 183 | 1 | 183 | 8.02e-126 | 351 |
| Msa1279690 | MtrunA17_Chr4g0073271 | 81.333 | 75 | 14 | 0 | 109 | 183 | 3 | 77 | 3.71e-47 | 149 |
| Msa1279690 | MtrunA17_Chr5g0400121 | 46.667 | 60 | 31 | 1 | 122 | 180 | 71 | 130 | 1.50e-18 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1279690 | AT1G22450.1 | 60.215 | 186 | 68 | 5 | 2 | 183 | 7 | 190 | 5.52e-58 | 180 |
| Msa1279690 | AT4G28060.1 | 84.000 | 75 | 12 | 0 | 109 | 183 | 4 | 78 | 4.88e-47 | 149 |
| Msa1279690 | AT5G57815.1 | 80.000 | 75 | 15 | 0 | 109 | 183 | 4 | 78 | 1.37e-45 | 145 |
| Msa1279690 | AT1G32710.1 | 47.368 | 57 | 29 | 1 | 115 | 170 | 59 | 115 | 2.43e-15 | 69.7 |
Find 80 sgRNAs with CRISPR-Local
Find 482 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAAGTTCCCCAAGTTAAAA+TGG | 0.203367 | 8_3:+17140067 | Msa1279690:three_prime_UTR |
| ATAAATGTCACCTTAATTTC+AGG | 0.274852 | 8_3:-17135641 | None:intergenic |
| TTAGCAAACTTATCGCATTC+TGG | 0.315240 | 8_3:-17135975 | None:intergenic |
| TGCTCTTTGCCCTGGCGAAT+GGG | 0.316213 | 8_3:+17136007 | Msa1279690:CDS |
| TCCACAGGAGTAGCCTCCTT+TGG | 0.353829 | 8_3:-17135452 | None:intergenic |
| AATGTTCAATGTTACACATT+TGG | 0.364487 | 8_3:+17139895 | Msa1279690:three_prime_UTR |
| TCAACTTCCTCGACTGCAAC+AGG | 0.367900 | 8_3:-17135425 | None:intergenic |
| GACAAACTTCCAAACACTTC+AGG | 0.374435 | 8_3:+17139871 | Msa1279690:three_prime_UTR |
| AGCTTGAGTTGTAAAATTGC+AGG | 0.377827 | 8_3:+17139950 | Msa1279690:three_prime_UTR |
| TGAACATTCCCTGAAGTGTT+TGG | 0.388496 | 8_3:-17139880 | None:intergenic |
| CGAAGAGAAACCTGAAATTA+AGG | 0.388584 | 8_3:+17135631 | Msa1279690:CDS |
| ATTCCCACTTACAGCGGGCC+TGG | 0.389692 | 8_3:-17139794 | None:intergenic |
| GTGCTCTTTGCCCTGGCGAA+TGG | 0.398969 | 8_3:+17136006 | Msa1279690:CDS |
| AGGGTTTAAACTCAATTTCT+GGG | 0.403190 | 8_3:-17140132 | None:intergenic |
| AAAATTGCAGGAAATGCTTC+TGG | 0.411720 | 8_3:+17139962 | Msa1279690:three_prime_UTR |
| AAAGTTCCCCAAGTTAAAAT+GGG | 0.413558 | 8_3:+17140068 | Msa1279690:three_prime_UTR |
| CTTAATTTCAGGTTTCTCTT+CGG | 0.421905 | 8_3:-17135630 | None:intergenic |
| CGCCATTGATGAAGGAAGCT+TGG | 0.423844 | 8_3:-17134278 | None:intergenic |
| TTTAACAGAGGGATTGTTGT+TGG | 0.425353 | 8_3:+17140021 | Msa1279690:three_prime_UTR |
| AACGTCCCTACCAGGTCTTC+AGG | 0.431630 | 8_3:-17140096 | None:intergenic |
| ACCACAGGGGCAGCAGGAAT+TGG | 0.431838 | 8_3:-17135503 | None:intergenic |
| AGCGAGAGTTTGAGAGGTGT+TGG | 0.433683 | 8_3:-17134308 | None:intergenic |
| ACTGTTGTCGAAGAAAATTC+TGG | 0.436657 | 8_3:+17135593 | Msa1279690:CDS |
| TTTGATTAGTAGTTGGAAAA+CGG | 0.436848 | 8_3:-17135784 | None:intergenic |
| TGCCTTGTTTGATTAGTAGT+TGG | 0.437774 | 8_3:-17135791 | None:intergenic |
| CTGCTTTCTTCAGCAACCAC+AGG | 0.440887 | 8_3:-17135518 | None:intergenic |
| AGTAAATAATAAGACATGTC+TGG | 0.440982 | 8_3:-17139993 | None:intergenic |
| TTAACAGAGGGATTGTTGTT+GGG | 0.447114 | 8_3:+17140022 | Msa1279690:three_prime_UTR |
| ACCGATGATATTCAATGTAT+CGG | 0.454130 | 8_3:-17135823 | None:intergenic |
| TTCCCACTTACAGCGGGCCT+GGG | 0.456685 | 8_3:-17139793 | None:intergenic |
| TGGAATGAGCAACGTGAGAA+TGG | 0.466781 | 8_3:+17139764 | Msa1279690:CDS |
| GCGAGAGTTTGAGAGGTGTT+GGG | 0.466889 | 8_3:-17134307 | None:intergenic |
| GTTGGAAAACGGAAATCTAC+TGG | 0.475723 | 8_3:-17135773 | None:intergenic |
| ATTGATGAAGGAAGCTTGGT+TGG | 0.484078 | 8_3:-17134274 | None:intergenic |
| ACAAACTTCCAAACACTTCA+GGG | 0.493429 | 8_3:+17139872 | Msa1279690:three_prime_UTR |
| TTGATGAAGGAAGCTTGGTT+GGG | 0.493583 | 8_3:-17134273 | None:intergenic |
| ATTCCCAGGCCCGCTGTAAG+TGG | 0.502323 | 8_3:+17139790 | Msa1279690:exon |
| TGATGTTTGGTGGTGTGTGT+TGG | 0.503136 | 8_3:-17134225 | None:intergenic |
| GAAATACATACCCATTCGCC+AGG | 0.503273 | 8_3:-17136017 | None:intergenic |
| GTGCAGATGCGTAGCTGCAA+AGG | 0.504908 | 8_3:+17135941 | Msa1279690:intron |
| AACCAAGCTTCCTTCATCAA+TGG | 0.505437 | 8_3:+17134276 | Msa1279690:exon |
| CCGATGATATTCAATGTATC+GGG | 0.509191 | 8_3:-17135822 | None:intergenic |
| TATTATCGTGCTCTTTGCCC+TGG | 0.512644 | 8_3:+17135999 | Msa1279690:CDS |
| CCCGATACATTGAATATCAT+CGG | 0.512705 | 8_3:+17135822 | Msa1279690:CDS |
| GGAGTTTCCGCCATTGATGA+AGG | 0.514863 | 8_3:-17134286 | None:intergenic |
| CGTGAGAATGGAACATTCCC+AGG | 0.527385 | 8_3:+17139776 | Msa1279690:CDS |
| AGAACAGAGAATGTGATGTT+TGG | 0.527798 | 8_3:-17134238 | None:intergenic |
| GTTCTTTCAACGTCCCTACC+AGG | 0.529995 | 8_3:-17140104 | None:intergenic |
| TTCTCAACAACAGCTTCCAC+AGG | 0.531965 | 8_3:-17135467 | None:intergenic |
| TCAGCAACCACAGGGGCAGC+AGG | 0.538575 | 8_3:-17135509 | None:intergenic |
| AGTGAATAGCACATCTATCT+CGG | 0.541527 | 8_3:-17139821 | None:intergenic |
| TGCAGATGCGTAGCTGCAAA+GGG | 0.545008 | 8_3:+17135942 | Msa1279690:intron |
| TGCTTTCTTCAGCAACCACA+GGG | 0.546805 | 8_3:-17135517 | None:intergenic |
| AAGCTTGGTTGGGCGGCTGT+AGG | 0.552607 | 8_3:-17134263 | None:intergenic |
| TTCTTCAACAGCAGGAGGGG+TGG | 0.556491 | 8_3:-17135546 | None:intergenic |
| GACATATTCCCACTTACAGC+GGG | 0.557299 | 8_3:-17139799 | None:intergenic |
| AGAAAATTCTGGTGATCAAG+AGG | 0.560378 | 8_3:+17135604 | Msa1279690:CDS |
| GAATACCTGAAGACCTGGTA+GGG | 0.569141 | 8_3:+17140091 | Msa1279690:three_prime_UTR |
| CCGTGCATCAGGTTGACAGA+TGG | 0.572171 | 8_3:+17139744 | Msa1279690:intron |
| TGGCTGTATTCGACTCGAGA+AGG | 0.573217 | 8_3:-17134191 | None:intergenic |
| TTCCCAGGCCCGCTGTAAGT+GGG | 0.582464 | 8_3:+17139791 | Msa1279690:exon |
| ACCAATTCCTGCTGCCCCTG+TGG | 0.597419 | 8_3:+17135502 | Msa1279690:CDS |
| ATGGGGAATACCTGAAGACC+TGG | 0.597466 | 8_3:+17140086 | Msa1279690:three_prime_UTR |
| ACAGAGAATGTGATGTTTGG+TGG | 0.599865 | 8_3:-17134235 | None:intergenic |
| TGTTGAAGAAAACGCTCTAG+AGG | 0.604689 | 8_3:+17135559 | Msa1279690:CDS |
| TTTGTAGGAATACTATGTGA+AGG | 0.608539 | 8_3:+17135352 | Msa1279690:intron |
| ATGAAGGAAGCTTGGTTGGG+CGG | 0.612987 | 8_3:-17134270 | None:intergenic |
| CGAGGAAGTTGAAAAGCCAA+AGG | 0.613030 | 8_3:+17135436 | Msa1279690:CDS |
| TACCTCAGCGAGAGTTTGAG+AGG | 0.614271 | 8_3:-17134314 | None:intergenic |
| GCCAAAGGAGGCTACTCCTG+TGG | 0.618743 | 8_3:+17135451 | Msa1279690:CDS |
| GGAATACCTGAAGACCTGGT+AGG | 0.627394 | 8_3:+17140090 | Msa1279690:three_prime_UTR |
| GTGTGTTGGTGAACTTACGC+TGG | 0.642225 | 8_3:-17134211 | None:intergenic |
| CAAGCTTCCTTCATCAATGG+CGG | 0.645199 | 8_3:+17134279 | Msa1279690:exon |
| TTCCAACTACTAATCAAACA+AGG | 0.661005 | 8_3:+17135789 | Msa1279690:CDS |
| GGAAGTTGAAAAGCCAAAGG+AGG | 0.661152 | 8_3:+17135439 | Msa1279690:CDS |
| CACCTCTCAAACTCTCGCTG+AGG | 0.670845 | 8_3:+17134312 | Msa1279690:CDS |
| AAGTTCCCCAAGTTAAAATG+GGG | 0.674188 | 8_3:+17140069 | Msa1279690:three_prime_UTR |
| GGACATATTCCCACTTACAG+CGG | 0.680467 | 8_3:-17139800 | None:intergenic |
| AAATACATACCCATTCGCCA+GGG | 0.687039 | 8_3:-17136016 | None:intergenic |
| GCTTTCTTCAGCAACCACAG+GGG | 0.759939 | 8_3:-17135516 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAGTTAATTTTAATAGTATT+GGG | - | chr8_3:17134948-17134967 | None:intergenic | 10.0% |
| !!! | TTAGTTAATTTTAATAGTAT+TGG | - | chr8_3:17134949-17134968 | None:intergenic | 10.0% |
| !! | TACTATTAAAATTAACTAAA+AGG | + | chr8_3:17134950-17134969 | Msa1279690:intron | 10.0% |
| !!! | AATATTTTTTATTATCTACT+AGG | + | chr8_3:17136047-17136066 | Msa1279690:intron | 10.0% |
| !!! | TTTTTCATTCGAAAAATAAA+TGG | - | chr8_3:17134416-17134435 | None:intergenic | 15.0% |
| !! | AATGATTAATATAACTACAT+GGG | - | chr8_3:17134717-17134736 | None:intergenic | 15.0% |
| !! | AAATGATTAATATAACTACA+TGG | - | chr8_3:17134718-17134737 | None:intergenic | 15.0% |
| !! | ACTATTAAAATTAACTGAAA+AGG | - | chr8_3:17135064-17135083 | None:intergenic | 15.0% |
| !! | TAATAGTTTATAGATCAAAT+TGG | + | chr8_3:17135077-17135096 | Msa1279690:intron | 15.0% |
| !! | ATAATGTTAAATGTAACAAA+AGG | - | chr8_3:17136254-17136273 | None:intergenic | 15.0% |
| !! | TAAATATTCATGTATATCAA+TGG | + | chr8_3:17136459-17136478 | Msa1279690:intron | 15.0% |
| !! | TTAAAAAGTAAAAACTAAGA+AGG | - | chr8_3:17136503-17136522 | None:intergenic | 15.0% |
| !!! | ATTTAGTTTATTTTTTGAGA+TGG | + | chr8_3:17136609-17136628 | Msa1279690:intron | 15.0% |
| !! | AATAAGAAATTAAAATGCTT+AGG | - | chr8_3:17137123-17137142 | None:intergenic | 15.0% |
| !!! | CTAATATTTTTCTATAAATG+TGG | - | chr8_3:17138773-17138792 | None:intergenic | 15.0% |
| !! | ATTAATTAAGAAAAGATGTT+CGG | + | chr8_3:17138987-17139006 | Msa1279690:intron | 15.0% |
| !! | AGTTAATAAAAAGAAAATTC+AGG | - | chr8_3:17139540-17139559 | None:intergenic | 15.0% |
| !!! | ATTTTTATTGTGTTCTTAAA+TGG | + | chr8_3:17139602-17139621 | Msa1279690:intron | 15.0% |
| !! | TAGATAATTAGAATGACAAA+AGG | + | chr8_3:17134812-17134831 | Msa1279690:intron | 20.0% |
| !!! | GTATTGTTTTTATGAAGAAT+TGG | + | chr8_3:17135188-17135207 | Msa1279690:intron | 20.0% |
| !!! | AGTTTATGTGTTTTTTTGTT+AGG | + | chr8_3:17135225-17135244 | Msa1279690:intron | 20.0% |
| !! | TACATAATACATTAGAAAAC+TGG | - | chr8_3:17135294-17135313 | None:intergenic | 20.0% |
| !!! | CAAAAATGTTTTTGATTTGT+AGG | + | chr8_3:17135337-17135356 | Msa1279690:intron | 20.0% |
| !! | TCAAATATCAAGATATTGAA+AGG | - | chr8_3:17135726-17135745 | None:intergenic | 20.0% |
| !! | TCCAAAAAAATAAAAGTCAA+CGG | - | chr8_3:17135859-17135878 | None:intergenic | 20.0% |
| !! | TTGCAAAAAAGTTTATGATT+TGG | - | chr8_3:17136290-17136309 | None:intergenic | 20.0% |
| !!! | GCACGTTTTTTTTTTTTTTT+TGG | - | chr8_3:17136372-17136391 | None:intergenic | 20.0% |
| !! | AAAAATAAACTAAATCCAAG+TGG | - | chr8_3:17136604-17136623 | None:intergenic | 20.0% |
| !!! | CTTCACATTTTAGTAATTTT+GGG | - | chr8_3:17136652-17136671 | None:intergenic | 20.0% |
| !!! | TCTTCACATTTTAGTAATTT+TGG | - | chr8_3:17136653-17136672 | None:intergenic | 20.0% |
| !! | AAAATTACTAAAATGTGAAG+AGG | + | chr8_3:17136652-17136671 | Msa1279690:intron | 20.0% |
| !! | AAGAATTTAGGAGAAAAAAA+AGG | + | chr8_3:17136834-17136853 | Msa1279690:intron | 20.0% |
| !! | CACTTGAAAAATTGTATTAA+TGG | - | chr8_3:17137211-17137230 | None:intergenic | 20.0% |
| !!! | CATTTTCTTATATGGTATAA+TGG | + | chr8_3:17137809-17137828 | Msa1279690:intron | 20.0% |
| !!! | CTTTTCTTAATTAATATGCT+AGG | - | chr8_3:17138982-17139001 | None:intergenic | 20.0% |
| !! | ACATCACATAGATTATAATT+TGG | - | chr8_3:17139290-17139309 | None:intergenic | 20.0% |
| !! | CAAAATGATATTTGTAAAAG+AGG | - | chr8_3:17139656-17139675 | None:intergenic | 20.0% |
| !!! | ATTTACTAGATTTTTAACAG+AGG | + | chr8_3:17140009-17140028 | Msa1279690:three_prime_UTR | 20.0% |
| !!! | TTTACTAGATTTTTAACAGA+GGG | + | chr8_3:17140010-17140029 | Msa1279690:three_prime_UTR | 20.0% |
| ! | ATTGGAAATTGAGAAGTAAA+AGG | - | chr8_3:17134352-17134371 | None:intergenic | 25.0% |
| ! | ATTAAAATAAAGATCCTAGG+AGG | - | chr8_3:17134387-17134406 | None:intergenic | 25.0% |
| ! | GGAATTAAAATAAAGATCCT+AGG | - | chr8_3:17134390-17134409 | None:intergenic | 25.0% |
| ! | CATTCGAAAAATAAATGGAT+TGG | - | chr8_3:17134411-17134430 | None:intergenic | 25.0% |
| ! | GCATCAAAATAACAAAATCA+AGG | - | chr8_3:17134453-17134472 | None:intergenic | 25.0% |
| ! | AAATGTTGGCATGAAAAATT+AGG | + | chr8_3:17134539-17134558 | Msa1279690:intron | 25.0% |
| !! | ATAACATTGATTGGACAAAA+TGG | - | chr8_3:17134651-17134670 | None:intergenic | 25.0% |
| ! | ACTACATAGATAACATTGAT+TGG | - | chr8_3:17134660-17134679 | None:intergenic | 25.0% |
| ! | CAAAACTTGCAAATTAGTAT+TGG | - | chr8_3:17134847-17134866 | None:intergenic | 25.0% |
| ! | ATGGATGTGAGTATAATTTA+GGG | + | chr8_3:17135037-17135056 | Msa1279690:intron | 25.0% |
| !!! | TTATGTGTTTTTTTGTTAGG+TGG | + | chr8_3:17135228-17135247 | Msa1279690:intron | 25.0% |
| ! | TATGTAAGACTTAAAGATGA+AGG | + | chr8_3:17135308-17135327 | Msa1279690:intron | 25.0% |
| ! | ATAAATGTCACCTTAATTTC+AGG | - | chr8_3:17135644-17135663 | None:intergenic | 25.0% |
| ! | ATTTAACTGAATCATCAATC+TGG | + | chr8_3:17135662-17135681 | Msa1279690:intron | 25.0% |
| ! | TTTGATTAGTAGTTGGAAAA+CGG | - | chr8_3:17135787-17135806 | None:intergenic | 25.0% |
| !!! | ACCGTTGACTTTTATTTTTT+TGG | + | chr8_3:17135855-17135874 | Msa1279690:intron | 25.0% |
| ! | CAACGGTTAAAATATAAGAA+CGG | - | chr8_3:17135913-17135932 | None:intergenic | 25.0% |
| ! | TATCTGTAAGTAAATCTTGT+TGG | - | chr8_3:17136090-17136109 | None:intergenic | 25.0% |
| ! | CAAAAGAAAAACTAAGTTGT+AGG | - | chr8_3:17136224-17136243 | None:intergenic | 25.0% |
| !! | TTTATGATTTGGCATAAAGT+CGG | - | chr8_3:17136279-17136298 | None:intergenic | 25.0% |
| !! | AGAGGAAATTCTTCTTTTAA+GGG | + | chr8_3:17136405-17136424 | Msa1279690:intron | 25.0% |
| ! | AGTTAAAGATGATAAAGCAA+TGG | - | chr8_3:17136551-17136570 | None:intergenic | 25.0% |
| !!! | AGATTTTGAGGAAAGAATTT+AGG | + | chr8_3:17136822-17136841 | Msa1279690:intron | 25.0% |
| ! | TATGCATATTACCAAATTAG+AGG | + | chr8_3:17136949-17136968 | Msa1279690:intron | 25.0% |
| ! | TGTATTAATGGTGAAAATTC+AGG | - | chr8_3:17137199-17137218 | None:intergenic | 25.0% |
| ! | GATCATTGAATTGGTATAAA+TGG | + | chr8_3:17137615-17137634 | Msa1279690:intron | 25.0% |
| !!! | TAGAAAAATCCAGGTTTTAA+GGG | - | chr8_3:17137697-17137716 | None:intergenic | 25.0% |
| ! | ATACAGAGAATAAATTGTGT+TGG | + | chr8_3:17137995-17138014 | Msa1279690:intron | 25.0% |
| !!! | AATAAATTGTGTTGGTGTTA+GGG | + | chr8_3:17138003-17138022 | Msa1279690:intron | 25.0% |
| !!! | TATAACCAATCTTTAAGACA+TGG | + | chr8_3:17138203-17138222 | Msa1279690:intron | 25.0% |
| !!! | TTTAAGACATGGAGAAATTT+TGG | + | chr8_3:17138214-17138233 | Msa1279690:intron | 25.0% |
| ! | AAGGTTTATGTTAGAAGAAA+GGG | + | chr8_3:17138418-17138437 | Msa1279690:intron | 25.0% |
| ! | AAACACAGAACAAAAGAAAA+AGG | + | chr8_3:17138729-17138748 | Msa1279690:intron | 25.0% |
| ! | TTGAGAAACATCATCAAATT+CGG | - | chr8_3:17138796-17138815 | None:intergenic | 25.0% |
| !!! | TCACCTATTTTTTGTAGTAT+GGG | - | chr8_3:17138907-17138926 | None:intergenic | 25.0% |
| !!! | TTCACCTATTTTTTGTAGTA+TGG | - | chr8_3:17138908-17138927 | None:intergenic | 25.0% |
| ! | AATAGGTGAAAAAATTGTGA+AGG | + | chr8_3:17138918-17138937 | Msa1279690:intron | 25.0% |
| ! | ATGAGAATTGGAAATTTATC+AGG | - | chr8_3:17139058-17139077 | None:intergenic | 25.0% |
| ! | CAATGCTTAGTTAAACAAAA+GGG | - | chr8_3:17139258-17139277 | None:intergenic | 25.0% |
| !!! | CTTTTGTTTAACTAAGCATT+GGG | + | chr8_3:17139257-17139276 | Msa1279690:intron | 25.0% |
| ! | AATTGGCATTAATATTTGTG+TGG | + | chr8_3:17139351-17139370 | Msa1279690:intron | 25.0% |
| ! | ATTGGCATTAATATTTGTGT+GGG | + | chr8_3:17139352-17139371 | Msa1279690:intron | 25.0% |
| ! | GATAATTAGTAAGGACTATT+GGG | + | chr8_3:17139427-17139446 | Msa1279690:intron | 25.0% |
| ! | AAAGGAAATGCAACAAAAAA+TGG | - | chr8_3:17139481-17139500 | None:intergenic | 25.0% |
| ! | CAGTTTATGGATTCTTAAAA+AGG | - | chr8_3:17139499-17139518 | None:intergenic | 25.0% |
| ! | AATGTTCAATGTTACACATT+TGG | + | chr8_3:17139895-17139914 | Msa1279690:three_prime_UTR | 25.0% |
| ! | AGTAAATAATAAGACATGTC+TGG | - | chr8_3:17139996-17140015 | None:intergenic | 25.0% |
| !! | TGGGGAACTTTTATTATTTT+GGG | - | chr8_3:17140059-17140078 | None:intergenic | 25.0% |
| !! | TTGGGGAACTTTTATTATTT+TGG | - | chr8_3:17140060-17140079 | None:intergenic | 25.0% |
| !! | AGGAGGTATTTAAGTAGAAT+TGG | - | chr8_3:17134370-17134389 | None:intergenic | 30.0% |
| ATTCTACTTAAATACCTCCT+AGG | + | chr8_3:17134370-17134389 | Msa1279690:intron | 30.0% | |
| ATTGAAGCTAATCAAGATCT+AGG | - | chr8_3:17134493-17134512 | None:intergenic | 30.0% | |
| GTTGTTACACTTCTAAATGT+TGG | + | chr8_3:17134525-17134544 | Msa1279690:intron | 30.0% | |
| ! | TAATAGTATTGGGACCAAAT+TGG | - | chr8_3:17134938-17134957 | None:intergenic | 30.0% |
| ! | ATGGATGAGTGCATAATTTT+GGG | - | chr8_3:17134977-17134996 | None:intergenic | 30.0% |
| TAGTTTATGGACCAATTTGA+TGG | + | chr8_3:17135018-17135037 | Msa1279690:intron | 30.0% | |
| TATACTCACATCCATCAAAT+TGG | - | chr8_3:17135032-17135051 | None:intergenic | 30.0% | |
| GATGGATGTGAGTATAATTT+AGG | + | chr8_3:17135036-17135055 | Msa1279690:intron | 30.0% | |
| GCATCCAAAATGAATAATGA+CGG | - | chr8_3:17135167-17135186 | None:intergenic | 30.0% | |
| TTTGTAGGAATACTATGTGA+AGG | + | chr8_3:17135352-17135371 | Msa1279690:intron | 30.0% | |
| !! | CTTAATTTCAGGTTTCTCTT+CGG | - | chr8_3:17135633-17135652 | None:intergenic | 30.0% |
| TTCCAACTACTAATCAAACA+AGG | + | chr8_3:17135789-17135808 | Msa1279690:CDS | 30.0% | |
| ACCGATGATATTCAATGTAT+CGG | - | chr8_3:17135826-17135845 | None:intergenic | 30.0% | |
| TTTATTATCTACTAGGCACT+AGG | + | chr8_3:17136054-17136073 | Msa1279690:intron | 30.0% | |
| GCTAATGTCAAATTTCTATC+TGG | + | chr8_3:17136119-17136138 | Msa1279690:intron | 30.0% | |
| AATTGCATCATTTGCTTTGT+TGG | + | chr8_3:17136160-17136179 | Msa1279690:intron | 30.0% | |
| !!! | AAAAACGTGCTGCTTTTTTA+TGG | + | chr8_3:17136382-17136401 | Msa1279690:intron | 30.0% |
| ! | GAGAGGAAATTCTTCTTTTA+AGG | + | chr8_3:17136404-17136423 | Msa1279690:intron | 30.0% |
| !! | TTCTTCTTTTAAGGGTGTAT+AGG | + | chr8_3:17136413-17136432 | Msa1279690:intron | 30.0% |
| !! | TCTTCTTTTAAGGGTGTATA+GGG | + | chr8_3:17136414-17136433 | Msa1279690:intron | 30.0% |
| ! | AAAATGTGAAGAGGCATAAA+CGG | + | chr8_3:17136661-17136680 | Msa1279690:intron | 30.0% |
| AGGAGAAAAAAAAGGAAAAG+TGG | + | chr8_3:17136842-17136861 | Msa1279690:intron | 30.0% | |
| AAAAAAAAGGAAAAGTGGCT+CGG | + | chr8_3:17136847-17136866 | Msa1279690:intron | 30.0% | |
| GTAATATGCATAGTTGTGAA+TGG | - | chr8_3:17136941-17136960 | None:intergenic | 30.0% | |
| TGTCATTAGAAGGTTTATGT+TGG | + | chr8_3:17137053-17137072 | Msa1279690:intron | 30.0% | |
| GTCATTAGAAGGTTTATGTT+GGG | + | chr8_3:17137054-17137073 | Msa1279690:intron | 30.0% | |
| GTTTATGTTGGGAATTACTT+GGG | + | chr8_3:17137065-17137084 | Msa1279690:intron | 30.0% | |
| ATCAAGGTAATACAATTGCT+AGG | - | chr8_3:17137171-17137190 | None:intergenic | 30.0% | |
| TTAATGGTGAAAATTCAGGT+TGG | - | chr8_3:17137195-17137214 | None:intergenic | 30.0% | |
| !!! | GTTTTGAGAGTGAATACTTT+TGG | + | chr8_3:17137334-17137353 | Msa1279690:intron | 30.0% |
| GTTACATGAATTTGTAGTCA+AGG | + | chr8_3:17137390-17137409 | Msa1279690:intron | 30.0% | |
| ! | CTAGAAAAATCCAGGTTTTA+AGG | - | chr8_3:17137698-17137717 | None:intergenic | 30.0% |
| !!! | TTGAAGGGCATTTTCTTATA+TGG | + | chr8_3:17137801-17137820 | Msa1279690:intron | 30.0% |
| ACACAATCTTAGATAGTTGA+TGG | + | chr8_3:17137862-17137881 | Msa1279690:intron | 30.0% | |
| TATTAACTCCATCAATGGTT+TGG | - | chr8_3:17137978-17137997 | None:intergenic | 30.0% | |
| ! | GAATAAATTGTGTTGGTGTT+AGG | + | chr8_3:17138002-17138021 | Msa1279690:intron | 30.0% |
| !! | ATAAATTGTGTTGGTGTTAG+GGG | + | chr8_3:17138004-17138023 | Msa1279690:intron | 30.0% |
| ATGTTGGGAAATGTTTGAAT+TGG | + | chr8_3:17138134-17138153 | Msa1279690:intron | 30.0% | |
| TGTTGGGAAATGTTTGAATT+GGG | + | chr8_3:17138135-17138154 | Msa1279690:intron | 30.0% | |
| ACTTCAAAAGGATATCAAAC+AGG | - | chr8_3:17138168-17138187 | None:intergenic | 30.0% | |
| !!! | TTTGATATCCTTTTGAAGTG+AGG | + | chr8_3:17138169-17138188 | Msa1279690:intron | 30.0% |
| TTTCTCCATGTCTTAAAGAT+TGG | - | chr8_3:17138211-17138230 | None:intergenic | 30.0% | |
| GATTTAAGCATGAAGATACA+AGG | + | chr8_3:17138283-17138302 | Msa1279690:intron | 30.0% | |
| ! | TAGGATTGGATTGGATATAA+AGG | + | chr8_3:17138362-17138381 | Msa1279690:intron | 30.0% |
| ! | AGGATTGGATTGGATATAAA+GGG | + | chr8_3:17138363-17138382 | Msa1279690:intron | 30.0% |
| GTGATATGAGAACAATAGTT+TGG | + | chr8_3:17138395-17138414 | Msa1279690:intron | 30.0% | |
| TATGAGAACAATAGTTTGGA+AGG | + | chr8_3:17138399-17138418 | Msa1279690:intron | 30.0% | |
| GAAGGTTTATGTTAGAAGAA+AGG | + | chr8_3:17138417-17138436 | Msa1279690:intron | 30.0% | |
| ! | TCTCATAGTTCTGTTGTAAA+CGG | + | chr8_3:17138535-17138554 | Msa1279690:intron | 30.0% |
| !! | TACACAATGTGAGTATTGAA+GGG | - | chr8_3:17138575-17138594 | None:intergenic | 30.0% |
| !! | ATACACAATGTGAGTATTGA+AGG | - | chr8_3:17138576-17138595 | None:intergenic | 30.0% |
| TACTCACATTGTGTATAGTT+CGG | + | chr8_3:17138580-17138599 | Msa1279690:intron | 30.0% | |
| !! | AGTCATTTTCCATTCTTCAA+TGG | + | chr8_3:17138628-17138647 | Msa1279690:intron | 30.0% |
| !! | TAACATAAGGTATTGTTGAG+AGG | + | chr8_3:17138659-17138678 | Msa1279690:intron | 30.0% |
| !! | AACATAAGGTATTGTTGAGA+GGG | + | chr8_3:17138660-17138679 | Msa1279690:intron | 30.0% |
| ACAGAACAAAAGAAAAAGGA+GGG | + | chr8_3:17138733-17138752 | Msa1279690:intron | 30.0% | |
| GATGTTTCTCAATAACCAAA+TGG | + | chr8_3:17138804-17138823 | Msa1279690:intron | 30.0% | |
| TTGTAGTATGGGTACATATA+GGG | - | chr8_3:17138896-17138915 | None:intergenic | 30.0% | |
| TTTGTAGTATGGGTACATAT+AGG | - | chr8_3:17138897-17138916 | None:intergenic | 30.0% | |
| GTACCCATACTACAAAAAAT+AGG | + | chr8_3:17138901-17138920 | Msa1279690:intron | 30.0% | |
| AATATGCTAGGATTACCAAA+GGG | - | chr8_3:17138970-17138989 | None:intergenic | 30.0% | |
| TAATATGCTAGGATTACCAA+AGG | - | chr8_3:17138971-17138990 | None:intergenic | 30.0% | |
| AATTAAGAAAAGATGTTCGG+TGG | + | chr8_3:17138990-17139009 | Msa1279690:intron | 30.0% | |
| AGCTCAATTATGATGAGAAT+TGG | - | chr8_3:17139070-17139089 | None:intergenic | 30.0% | |
| ATTGAGCTATTATTTGAGTG+TGG | + | chr8_3:17139082-17139101 | Msa1279690:intron | 30.0% | |
| TTGAGCTATTATTTGAGTGT+GGG | + | chr8_3:17139083-17139102 | Msa1279690:intron | 30.0% | |
| AATGATCATTTCTTCCAAAC+AGG | + | chr8_3:17139111-17139130 | Msa1279690:intron | 30.0% | |
| CCAATGCTTAGTTAAACAAA+AGG | - | chr8_3:17139259-17139278 | None:intergenic | 30.0% | |
| !! | CCTTTTGTTTAACTAAGCAT+TGG | + | chr8_3:17139256-17139275 | Msa1279690:intron | 30.0% |
| GATTTAGAAGAGAAGATTAC+TGG | + | chr8_3:17139326-17139345 | Msa1279690:intron | 30.0% | |
| TTGGCATTAATATTTGTGTG+GGG | + | chr8_3:17139353-17139372 | Msa1279690:intron | 30.0% | |
| CAAGTTAGGGATAATTAGTA+AGG | + | chr8_3:17139418-17139437 | Msa1279690:intron | 30.0% | |
| GGATAATTAGTAAGGACTAT+TGG | + | chr8_3:17139426-17139445 | Msa1279690:intron | 30.0% | |
| ATCAAGGTGATTTCAGTTTA+TGG | - | chr8_3:17139512-17139531 | None:intergenic | 30.0% | |
| AACCAAATCAACACTTGAAT+TGG | + | chr8_3:17139575-17139594 | Msa1279690:intron | 30.0% | |
| !! | ATCCAATTCAAGTGTTGATT+TGG | - | chr8_3:17139580-17139599 | None:intergenic | 30.0% |
| !!! | GGGAACTTTTATTATTTTGG+GGG | - | chr8_3:17140057-17140076 | None:intergenic | 30.0% |
| !! | GGGGAACTTTTATTATTTTG+GGG | - | chr8_3:17140058-17140077 | None:intergenic | 30.0% |
| AAAAGTTCCCCAAGTTAAAA+TGG | + | chr8_3:17140067-17140086 | Msa1279690:three_prime_UTR | 30.0% | |
| AAAGTTCCCCAAGTTAAAAT+GGG | + | chr8_3:17140068-17140087 | Msa1279690:three_prime_UTR | 30.0% | |
| AGAACAGAGAATGTGATGTT+TGG | - | chr8_3:17134241-17134260 | None:intergenic | 35.0% | |
| CTAAGCTCAGATCTATATCA+TGG | + | chr8_3:17134611-17134630 | Msa1279690:intron | 35.0% | |
| ! | GATGGATGAGTGCATAATTT+TGG | - | chr8_3:17134978-17134997 | None:intergenic | 35.0% |
| TATGCACTCATCCATCAATT+TGG | + | chr8_3:17134982-17135001 | Msa1279690:intron | 35.0% | |
| TCCATAAACTAGATAACCGA+GGG | - | chr8_3:17135009-17135028 | None:intergenic | 35.0% | |
| ! | GTTGCCGTCATTATTCATTT+TGG | + | chr8_3:17135160-17135179 | Msa1279690:intron | 35.0% |
| CAATGATCTGAGGAAATTGA+GGG | - | chr8_3:17135271-17135290 | None:intergenic | 35.0% | |
| GGACAAACAAGAGAAAAAAG+AGG | + | chr8_3:17135373-17135392 | Msa1279690:CDS | 35.0% | |
| ACTGTTGTCGAAGAAAATTC+TGG | + | chr8_3:17135593-17135612 | Msa1279690:CDS | 35.0% | |
| AGAAAATTCTGGTGATCAAG+AGG | + | chr8_3:17135604-17135623 | Msa1279690:CDS | 35.0% | |
| CGAAGAGAAACCTGAAATTA+AGG | + | chr8_3:17135631-17135650 | Msa1279690:CDS | 35.0% | |
| AGTCTCAAGCTGGAAAATAA+TGG | - | chr8_3:17135750-17135769 | None:intergenic | 35.0% | |
| !! | TGCCTTGTTTGATTAGTAGT+TGG | - | chr8_3:17135794-17135813 | None:intergenic | 35.0% |
| CCGATGATATTCAATGTATC+GGG | - | chr8_3:17135825-17135844 | None:intergenic | 35.0% | |
| CCCGATACATTGAATATCAT+CGG | + | chr8_3:17135822-17135841 | Msa1279690:CDS | 35.0% | |
| CATCTGCACATGAATTTCAA+CGG | - | chr8_3:17135930-17135949 | None:intergenic | 35.0% | |
| TTAGCAAACTTATCGCATTC+TGG | - | chr8_3:17135978-17135997 | None:intergenic | 35.0% | |
| TTTCTATCTGGACTCTTACA+TGG | + | chr8_3:17136131-17136150 | Msa1279690:intron | 35.0% | |
| ACATGACCACTGTTGTTAAA+TGG | + | chr8_3:17136692-17136711 | Msa1279690:intron | 35.0% | |
| TCAGCACAAGAAATTTGTGA+AGG | + | chr8_3:17136739-17136758 | Msa1279690:intron | 35.0% | |
| CAGCACAAGAAATTTGTGAA+GGG | + | chr8_3:17136740-17136759 | Msa1279690:intron | 35.0% | |
| ! | TAACTTCTTTGACTTACCGT+TGG | + | chr8_3:17136892-17136911 | Msa1279690:intron | 35.0% |
| CAGAATATGGAAGAATCCAA+CGG | - | chr8_3:17136911-17136930 | None:intergenic | 35.0% | |
| ATATGCATAGTTGTGAATGG+CGG | - | chr8_3:17136938-17136957 | None:intergenic | 35.0% | |
| TATTACCAAATTAGAGGCCA+TGG | + | chr8_3:17136955-17136974 | Msa1279690:intron | 35.0% | |
| GGTTTATGTTGGGAATTACT+TGG | + | chr8_3:17137064-17137083 | Msa1279690:intron | 35.0% | |
| !! | GAAAATTCAGGTTGGTATCA+AGG | - | chr8_3:17137187-17137206 | None:intergenic | 35.0% |
| AATCTCTATTGTATGGCAAG+TGG | + | chr8_3:17137464-17137483 | Msa1279690:intron | 35.0% | |
| TTGTATGGCAAGTGGAATAA+AGG | + | chr8_3:17137472-17137491 | Msa1279690:intron | 35.0% | |
| TTCACTTGAAGTAACCACTT+AGG | + | chr8_3:17137508-17137527 | Msa1279690:intron | 35.0% | |
| TCACTTGAAGTAACCACTTA+GGG | + | chr8_3:17137509-17137528 | Msa1279690:intron | 35.0% | |
| TTGGGGATTGATCATTGAAT+TGG | + | chr8_3:17137606-17137625 | Msa1279690:intron | 35.0% | |
| GAATTGGTATAAATGGTCTG+AGG | + | chr8_3:17137622-17137641 | Msa1279690:intron | 35.0% | |
| AACAGTTGTTAAGGTTTCGT+TGG | + | chr8_3:17137645-17137664 | Msa1279690:intron | 35.0% | |
| ACAGTTGTTAAGGTTTCGTT+GGG | + | chr8_3:17137646-17137665 | Msa1279690:intron | 35.0% | |
| TATGCTAAACAACAGTCCAA+TGG | - | chr8_3:17137725-17137744 | None:intergenic | 35.0% | |
| AGCATAAAAAACAAGCTCAC+CGG | + | chr8_3:17137739-17137758 | Msa1279690:intron | 35.0% | |
| !! | TCTTAGATAGTTGATGGTCT+TGG | + | chr8_3:17137868-17137887 | Msa1279690:intron | 35.0% |
| CTCTGTATTAACTCCATCAA+TGG | - | chr8_3:17137983-17138002 | None:intergenic | 35.0% | |
| TAAATCGCATGAGAAGTTCA+AGG | + | chr8_3:17138041-17138060 | Msa1279690:intron | 35.0% | |
| !! | ACCAATTAGTGCTGGTATAT+AGG | + | chr8_3:17138077-17138096 | Msa1279690:intron | 35.0% |
| TCCTATATACCAGCACTAAT+TGG | - | chr8_3:17138081-17138100 | None:intergenic | 35.0% | |
| GTTGGGAAATGTTTGAATTG+GGG | + | chr8_3:17138136-17138155 | Msa1279690:intron | 35.0% | |
| !!! | ATATCCTTTTGAAGTGAGGA+GGG | + | chr8_3:17138173-17138192 | Msa1279690:intron | 35.0% |
| !! | CATGGAGAAATTTTGGAGAA+AGG | + | chr8_3:17138221-17138240 | Msa1279690:intron | 35.0% |
| !! | GAGAAATTTTGGAGAAAGGT+GGG | + | chr8_3:17138225-17138244 | Msa1279690:intron | 35.0% |
| !! | AGAAATTTTGGAGAAAGGTG+GGG | + | chr8_3:17138226-17138245 | Msa1279690:intron | 35.0% |
| AATTTCTTTCTCCTGGAGTT+AGG | + | chr8_3:17138322-17138341 | Msa1279690:intron | 35.0% | |
| !!! | GACTTCAGTAGTTTTAGGAT+TGG | + | chr8_3:17138348-17138367 | Msa1279690:intron | 35.0% |
| !!! | CAGTAGTTTTAGGATTGGAT+TGG | + | chr8_3:17138353-17138372 | Msa1279690:intron | 35.0% |
| ! | GGATTGGATTGGATATAAAG+GGG | + | chr8_3:17138364-17138383 | Msa1279690:intron | 35.0% |
| ! | GATTGGATTGGATATAAAGG+GGG | + | chr8_3:17138365-17138384 | Msa1279690:intron | 35.0% |
| TGGATATAAAGGGGGTAATA+TGG | + | chr8_3:17138373-17138392 | Msa1279690:intron | 35.0% | |
| TAGAAGAAAGGGAAATAGAC+TGG | + | chr8_3:17138429-17138448 | Msa1279690:intron | 35.0% | |
| AGAAGAAAGGGAAATAGACT+GGG | + | chr8_3:17138430-17138449 | Msa1279690:intron | 35.0% | |
| ATGAGAGAAATTAGAGACTC+TGG | - | chr8_3:17138521-17138540 | None:intergenic | 35.0% | |
| !! | AATGGTGCTACTGTAACATA+AGG | + | chr8_3:17138646-17138665 | Msa1279690:intron | 35.0% |
| !! | ACATAAGGTATTGTTGAGAG+GGG | + | chr8_3:17138661-17138680 | Msa1279690:intron | 35.0% |
| CACAGAACAAAAGAAAAAGG+AGG | + | chr8_3:17138732-17138751 | Msa1279690:intron | 35.0% | |
| ATATGCTAGGATTACCAAAG+GGG | - | chr8_3:17138969-17138988 | None:intergenic | 35.0% | |
| AGGGATTCATGTAGACTATT+TGG | + | chr8_3:17139013-17139032 | Msa1279690:intron | 35.0% | |
| TGAGCTATTATTTGAGTGTG+GGG | + | chr8_3:17139084-17139103 | Msa1279690:intron | 35.0% | |
| TCCAAACAGGATCTCAAATT+AGG | + | chr8_3:17139124-17139143 | Msa1279690:intron | 35.0% | |
| CCAAACAGGATCTCAAATTA+GGG | + | chr8_3:17139125-17139144 | Msa1279690:intron | 35.0% | |
| !!! | TAGGAATGTCATTTTCTCTC+GGG | - | chr8_3:17139165-17139184 | None:intergenic | 35.0% |
| CTTCTCTTCTAAATCTGATC+AGG | - | chr8_3:17139321-17139340 | None:intergenic | 35.0% | |
| ! | AGAGAAGATTACTGGCTAAT+TGG | + | chr8_3:17139334-17139353 | Msa1279690:intron | 35.0% |
| AGAGTATAAGCATGACTGTA+AGG | + | chr8_3:17139388-17139407 | Msa1279690:intron | 35.0% | |
| GAGTATAAGCATGACTGTAA+GGG | + | chr8_3:17139389-17139408 | Msa1279690:intron | 35.0% | |
| AGTATAAGCATGACTGTAAG+GGG | + | chr8_3:17139390-17139409 | Msa1279690:intron | 35.0% | |
| AACTGAAATCACCTTGATAC+AGG | + | chr8_3:17139514-17139533 | Msa1279690:intron | 35.0% | |
| !! | TCAAGTGTTGATTTGGTTGA+AGG | - | chr8_3:17139573-17139592 | None:intergenic | 35.0% |
| AGGTCAATGTTAACATTGGT+AGG | - | chr8_3:17139693-17139712 | None:intergenic | 35.0% | |
| CATGAGGTCAATGTTAACAT+TGG | - | chr8_3:17139697-17139716 | None:intergenic | 35.0% | |
| AAAACTGAGTGTTAGACATG+AGG | - | chr8_3:17139713-17139732 | None:intergenic | 35.0% | |
| AGTGAATAGCACATCTATCT+CGG | - | chr8_3:17139824-17139843 | None:intergenic | 35.0% | |
| ACAAACTTCCAAACACTTCA+GGG | + | chr8_3:17139872-17139891 | Msa1279690:three_prime_UTR | 35.0% | |
| ! | TGCAATTTTACAACTCAAGC+TGG | - | chr8_3:17139951-17139970 | None:intergenic | 35.0% |
| ! | AGCTTGAGTTGTAAAATTGC+AGG | + | chr8_3:17139950-17139969 | Msa1279690:three_prime_UTR | 35.0% |
| AAAATTGCAGGAAATGCTTC+TGG | + | chr8_3:17139962-17139981 | Msa1279690:three_prime_UTR | 35.0% | |
| TTTAACAGAGGGATTGTTGT+TGG | + | chr8_3:17140021-17140040 | Msa1279690:three_prime_UTR | 35.0% | |
| ! | TTAACAGAGGGATTGTTGTT+GGG | + | chr8_3:17140022-17140041 | Msa1279690:three_prime_UTR | 35.0% |
| AAGTTCCCCAAGTTAAAATG+GGG | + | chr8_3:17140069-17140088 | Msa1279690:three_prime_UTR | 35.0% | |
| !!! | GTATTCCCCATTTTAACTTG+GGG | - | chr8_3:17140077-17140096 | None:intergenic | 35.0% |
| !!! | GGTATTCCCCATTTTAACTT+GGG | - | chr8_3:17140078-17140097 | None:intergenic | 35.0% |
| !!! | AGGTATTCCCCATTTTAACT+TGG | - | chr8_3:17140079-17140098 | None:intergenic | 35.0% |
| ACAGAGAATGTGATGTTTGG+TGG | - | chr8_3:17134238-17134257 | None:intergenic | 40.0% | |
| TTGATGAAGGAAGCTTGGTT+GGG | - | chr8_3:17134276-17134295 | None:intergenic | 40.0% | |
| ATTGATGAAGGAAGCTTGGT+TGG | - | chr8_3:17134277-17134296 | None:intergenic | 40.0% | |
| AACCAAGCTTCCTTCATCAA+TGG | + | chr8_3:17134276-17134295 | Msa1279690:exon | 40.0% | |
| GAAGCTAATCAAGATCTAGG+AGG | - | chr8_3:17134490-17134509 | None:intergenic | 40.0% | |
| ! | ACCCTCGGTTATCTAGTTTA+TGG | + | chr8_3:17135005-17135024 | Msa1279690:intron | 40.0% |
| GTCCATAAACTAGATAACCG+AGG | - | chr8_3:17135010-17135029 | None:intergenic | 40.0% | |
| TGGTGAGAGAGTGATAGTTT+AGG | + | chr8_3:17135097-17135116 | Msa1279690:intron | 40.0% | |
| GGTGAGAGAGTGATAGTTTA+GGG | + | chr8_3:17135098-17135117 | Msa1279690:intron | 40.0% | |
| GCAATGATCTGAGGAAATTG+AGG | - | chr8_3:17135272-17135291 | None:intergenic | 40.0% | |
| AGAAAACTGGCAATGATCTG+AGG | - | chr8_3:17135281-17135300 | None:intergenic | 40.0% | |
| TGTTGAAGAAAACGCTCTAG+AGG | + | chr8_3:17135559-17135578 | Msa1279690:CDS | 40.0% | |
| GTTGGAAAACGGAAATCTAC+TGG | - | chr8_3:17135776-17135795 | None:intergenic | 40.0% | |
| AAATACATACCCATTCGCCA+GGG | - | chr8_3:17136019-17136038 | None:intergenic | 40.0% | |
| ACAATAGAAACACGCCGTTA+CGG | - | chr8_3:17136791-17136810 | None:intergenic | 40.0% | |
| ! | CGTGTTTCTATTGTGGAGTT+TGG | + | chr8_3:17136797-17136816 | Msa1279690:intron | 40.0% |
| !! | TGGAGTTTGGTGAGATTTTG+AGG | + | chr8_3:17136810-17136829 | Msa1279690:intron | 40.0% |
| ! | ACCTTCCTTTTCCTCTATTG+TGG | - | chr8_3:17136873-17136892 | None:intergenic | 40.0% |
| CACTAATATTGCAAACTGGG+CGG | - | chr8_3:17137018-17137037 | None:intergenic | 40.0% | |
| GCCCAGTTTGCAATATTAGT+GGG | + | chr8_3:17137017-17137036 | Msa1279690:intron | 40.0% | |
| CCCCACTAATATTGCAAACT+GGG | - | chr8_3:17137021-17137040 | None:intergenic | 40.0% | |
| CCCAGTTTGCAATATTAGTG+GGG | + | chr8_3:17137018-17137037 | Msa1279690:intron | 40.0% | |
| TCCCCACTAATATTGCAAAC+TGG | - | chr8_3:17137022-17137041 | None:intergenic | 40.0% | |
| !! | TGTGTGTAGGTGTCATTAGA+AGG | + | chr8_3:17137043-17137062 | Msa1279690:intron | 40.0% |
| CAATTGCTAGGATCTACAAC+AGG | - | chr8_3:17137159-17137178 | None:intergenic | 40.0% | |
| ACTTAGGATTCCATTGTTGC+AGG | - | chr8_3:17137309-17137328 | None:intergenic | 40.0% | |
| ACTCTCAAAACTCTCGACTT+AGG | - | chr8_3:17137325-17137344 | None:intergenic | 40.0% | |
| GTCAATCTCGATGAACTTCA+AGG | + | chr8_3:17137412-17137431 | Msa1279690:intron | 40.0% | |
| TCGATGAACTTCAAGGTTCA+TGG | + | chr8_3:17137419-17137438 | Msa1279690:intron | 40.0% | |
| GAACTTCAAGGTTCATGGTA+TGG | + | chr8_3:17137424-17137443 | Msa1279690:intron | 40.0% | |
| GGGGGTTAATCTCTATTGTA+TGG | + | chr8_3:17137457-17137476 | Msa1279690:intron | 40.0% | |
| TTGAAGTAACCACTTAGGGA+GGG | + | chr8_3:17137513-17137532 | Msa1279690:intron | 40.0% | |
| TTGACTCTCTTGTCTTGCAT+TGG | + | chr8_3:17137587-17137606 | Msa1279690:intron | 40.0% | |
| TGACTCTCTTGTCTTGCATT+GGG | + | chr8_3:17137588-17137607 | Msa1279690:intron | 40.0% | |
| !!! | AGGTTTTAAGGGTGAATCAC+TGG | - | chr8_3:17137686-17137705 | None:intergenic | 40.0% |
| AGTGATTCACCCTTAAAACC+TGG | + | chr8_3:17137685-17137704 | Msa1279690:intron | 40.0% | |
| ! | ATGGCACTCTAGAAAAATCC+AGG | - | chr8_3:17137706-17137725 | None:intergenic | 40.0% |
| !!! | GGATTTTTCTAGAGTGCCAT+TGG | + | chr8_3:17137706-17137725 | Msa1279690:intron | 40.0% |
| ATAAAAAACAAGCTCACCGG+TGG | + | chr8_3:17137742-17137761 | Msa1279690:intron | 40.0% | |
| TCTGTTGCACTTCATGTTGA+AGG | + | chr8_3:17137785-17137804 | Msa1279690:intron | 40.0% | |
| CTGTTGCACTTCATGTTGAA+GGG | + | chr8_3:17137786-17137805 | Msa1279690:intron | 40.0% | |
| AGTGGAAACCAAACCATTGA+TGG | + | chr8_3:17137967-17137986 | Msa1279690:intron | 40.0% | |
| ATGAGAAGTTCAAGGAGAAG+TGG | + | chr8_3:17138049-17138068 | Msa1279690:intron | 40.0% | |
| TGAGAAGTTCAAGGAGAAGT+GGG | + | chr8_3:17138050-17138069 | Msa1279690:intron | 40.0% | |
| CATATGGCAACATCCTCATA+TGG | - | chr8_3:17138111-17138130 | None:intergenic | 40.0% | |
| TATGAGGATGTTGCCATATG+AGG | + | chr8_3:17138111-17138130 | Msa1279690:intron | 40.0% | |
| ATGTTGCCATATGAGGATGT+TGG | + | chr8_3:17138118-17138137 | Msa1279690:intron | 40.0% | |
| TGTTGCCATATGAGGATGTT+GGG | + | chr8_3:17138119-17138138 | Msa1279690:intron | 40.0% | |
| CATTTCCCAACATCCTCATA+TGG | - | chr8_3:17138127-17138146 | None:intergenic | 40.0% | |
| !!! | GATATCCTTTTGAAGTGAGG+AGG | + | chr8_3:17138172-17138191 | Msa1279690:intron | 40.0% |
| !! | GGAGAAATTTTGGAGAAAGG+TGG | + | chr8_3:17138224-17138243 | Msa1279690:intron | 40.0% |
| AAGCATGAAGATACAAGGAG+TGG | + | chr8_3:17138288-17138307 | Msa1279690:intron | 40.0% | |
| AGCATGAAGATACAAGGAGT+GGG | + | chr8_3:17138289-17138308 | Msa1279690:intron | 40.0% | |
| CGATCAGAATTTCTTTCTCC+TGG | + | chr8_3:17138315-17138334 | Msa1279690:intron | 40.0% | |
| ! | GGAAGGACTTCAGTAGTTTT+AGG | + | chr8_3:17138343-17138362 | Msa1279690:intron | 40.0% |
| GAAGAAAGGGAAATAGACTG+GGG | + | chr8_3:17138431-17138450 | Msa1279690:intron | 40.0% | |
| AAGAAAGGGAAATAGACTGG+GGG | + | chr8_3:17138432-17138451 | Msa1279690:intron | 40.0% | |
| AACTCCTATCTGGTCTAATC+AGG | - | chr8_3:17138467-17138486 | None:intergenic | 40.0% | |
| GATTAGACCAGATAGGAGTT+AGG | + | chr8_3:17138467-17138486 | Msa1279690:intron | 40.0% | |
| ACAGTAGCACCATTGAAGAA+TGG | - | chr8_3:17138640-17138659 | None:intergenic | 40.0% | |
| CTTCGCTTGAATCTTGCAAA+GGG | - | chr8_3:17138692-17138711 | None:intergenic | 40.0% | |
| ACAAAAGAAAAAGGAGGGAC+AGG | + | chr8_3:17138738-17138757 | Msa1279690:intron | 40.0% | |
| GTCATGCAATCTCATTGAAC+TGG | + | chr8_3:17138849-17138868 | Msa1279690:intron | 40.0% | |
| ! | TAAGAAAAGATGTTCGGTGG+AGG | + | chr8_3:17138993-17139012 | Msa1279690:intron | 40.0% |
| ! | AAGAAAAGATGTTCGGTGGA+GGG | + | chr8_3:17138994-17139013 | Msa1279690:intron | 40.0% |
| !! | CAGGAATCATTTGCTGTGTA+GGG | - | chr8_3:17139039-17139058 | None:intergenic | 40.0% |
| !! | TCAGGAATCATTTGCTGTGT+AGG | - | chr8_3:17139040-17139059 | None:intergenic | 40.0% |
| ! | CCCTAATTTGAGATCCTGTT+TGG | - | chr8_3:17139128-17139147 | None:intergenic | 40.0% |
| GTATAAGCATGACTGTAAGG+GGG | + | chr8_3:17139391-17139410 | Msa1279690:intron | 40.0% | |
| TATAAGCATGACTGTAAGGG+GGG | + | chr8_3:17139392-17139411 | Msa1279690:intron | 40.0% | |
| AATGGCCATGTGATTCAAGA+GGG | - | chr8_3:17139463-17139482 | None:intergenic | 40.0% | |
| AAATGGCCATGTGATTCAAG+AGG | - | chr8_3:17139464-17139483 | None:intergenic | 40.0% | |
| GAAAATTCAGGCCTGTATCA+AGG | - | chr8_3:17139528-17139547 | None:intergenic | 40.0% | |
| GACAAACTTCCAAACACTTC+AGG | + | chr8_3:17139871-17139890 | Msa1279690:three_prime_UTR | 40.0% | |
| ! | TGAACATTCCCTGAAGTGTT+TGG | - | chr8_3:17139883-17139902 | None:intergenic | 40.0% |
| !! | TGATGTTTGGTGGTGTGTGT+TGG | - | chr8_3:17134228-17134247 | None:intergenic | 45.0% |
| CAAGCTTCCTTCATCAATGG+CGG | + | chr8_3:17134279-17134298 | Msa1279690:exon | 45.0% | |
| CATCCATCAATTTGGACCCT+CGG | + | chr8_3:17134990-17135009 | Msa1279690:intron | 45.0% | |
| TAACCGAGGGTCCAAATTGA+TGG | - | chr8_3:17134996-17135015 | None:intergenic | 45.0% | |
| !! | ACAGGTTTTTCGACAGCAAC+TGG | - | chr8_3:17135410-17135429 | None:intergenic | 45.0% |
| CGAGGAAGTTGAAAAGCCAA+AGG | + | chr8_3:17135436-17135455 | Msa1279690:CDS | 45.0% | |
| GGAAGTTGAAAAGCCAAAGG+AGG | + | chr8_3:17135439-17135458 | Msa1279690:CDS | 45.0% | |
| TTCTCAACAACAGCTTCCAC+AGG | - | chr8_3:17135470-17135489 | None:intergenic | 45.0% | |
| TGCTTTCTTCAGCAACCACA+GGG | - | chr8_3:17135520-17135539 | None:intergenic | 45.0% | |
| ! | GTTTTCTTCAACAGCAGGAG+GGG | - | chr8_3:17135552-17135571 | None:intergenic | 45.0% |
| ! | CGTTTTCTTCAACAGCAGGA+GGG | - | chr8_3:17135553-17135572 | None:intergenic | 45.0% |
| !! | AGAGCGTTTTCTTCAACAGC+AGG | - | chr8_3:17135557-17135576 | None:intergenic | 45.0% |
| TATTATCGTGCTCTTTGCCC+TGG | + | chr8_3:17135999-17136018 | Msa1279690:CDS | 45.0% | |
| GAAATACATACCCATTCGCC+AGG | - | chr8_3:17136020-17136039 | None:intergenic | 45.0% | |
| TCTGGACTCTTACATGGCAA+TGG | + | chr8_3:17136137-17136156 | Msa1279690:intron | 45.0% | |
| !!! | CGTGCTGCTTTTTTATGGAG+AGG | + | chr8_3:17136387-17136406 | Msa1279690:intron | 45.0% |
| CTTCATGCCTTCAACTCTTG+TGG | + | chr8_3:17136573-17136592 | Msa1279690:intron | 45.0% | |
| GGTTAAGCCACAAGAGTTGA+AGG | - | chr8_3:17136583-17136602 | None:intergenic | 45.0% | |
| ACTCTTGTGGCTTAACCACT+TGG | + | chr8_3:17136586-17136605 | Msa1279690:intron | 45.0% | |
| TGGCAGCCATTTAACAACAG+TGG | - | chr8_3:17136701-17136720 | None:intergenic | 45.0% | |
| CTGTTGTTAAATGGCTGCCA+TGG | + | chr8_3:17136701-17136720 | Msa1279690:intron | 45.0% | |
| GATTGTCAGCTATTCTGCCA+TGG | - | chr8_3:17136721-17136740 | None:intergenic | 45.0% | |
| ! | GTAACGGCGTGTTTCTATTG+TGG | + | chr8_3:17136790-17136809 | Msa1279690:intron | 45.0% |
| GCCACAATAGAGGAAAAGGA+AGG | + | chr8_3:17136869-17136888 | Msa1279690:intron | 45.0% | |
| CAGTTCCATGGCCTCTAATT+TGG | - | chr8_3:17136963-17136982 | None:intergenic | 45.0% | |
| CCAAGATCTGATCAGTTCCA+TGG | - | chr8_3:17136975-17136994 | None:intergenic | 45.0% | |
| CCATGGAACTGATCAGATCT+TGG | + | chr8_3:17136972-17136991 | Msa1279690:intron | 45.0% | |
| ACTGATCAGATCTTGGAGAC+AGG | + | chr8_3:17136979-17136998 | Msa1279690:intron | 45.0% | |
| CGCCCAGTTTGCAATATTAG+TGG | + | chr8_3:17137016-17137035 | Msa1279690:intron | 45.0% | |
| ! | TATTAGTGGGGAGTGTGTGT+AGG | + | chr8_3:17137030-17137049 | Msa1279690:intron | 45.0% |
| GGGAATTACTTGGGACTGTT+TGG | + | chr8_3:17137074-17137093 | Msa1279690:intron | 45.0% | |
| ! | TTGGGACTGTTTGGTGAGAA+TGG | + | chr8_3:17137083-17137102 | Msa1279690:intron | 45.0% |
| ! | TGGGACTGTTTGGTGAGAAT+GGG | + | chr8_3:17137084-17137103 | Msa1279690:intron | 45.0% |
| ATAACGACCATTCGAGCTCT+GGG | - | chr8_3:17137285-17137304 | None:intergenic | 45.0% | |
| CAAGGTTCATGGTATGGACA+AGG | + | chr8_3:17137430-17137449 | Msa1279690:intron | 45.0% | |
| TTCATGGTATGGACAAGGAG+AGG | + | chr8_3:17137435-17137454 | Msa1279690:intron | 45.0% | |
| TCATGGTATGGACAAGGAGA+GGG | + | chr8_3:17137436-17137455 | Msa1279690:intron | 45.0% | |
| TGGCAAGTGGAATAAAGGAG+TGG | + | chr8_3:17137477-17137496 | Msa1279690:intron | 45.0% | |
| CTTGAAGTAACCACTTAGGG+AGG | + | chr8_3:17137512-17137531 | Msa1279690:intron | 45.0% | |
| GACTCTCTTGTCTTGCATTG+GGG | + | chr8_3:17137589-17137608 | Msa1279690:intron | 45.0% | |
| GGTCTGAGGAACAGTTGTTA+AGG | + | chr8_3:17137636-17137655 | Msa1279690:intron | 45.0% | |
| GTTGTTAAGGTTTCGTTGGG+AGG | + | chr8_3:17137649-17137668 | Msa1279690:intron | 45.0% | |
| TTTCGTTGGGAGGAGTTCAA+TGG | + | chr8_3:17137659-17137678 | Msa1279690:intron | 45.0% | |
| GAATCTCTGATCTACGTCTC+TGG | - | chr8_3:17137923-17137942 | None:intergenic | 45.0% | |
| AGAGATTCACCATGAGAGAG+AGG | + | chr8_3:17137935-17137954 | Msa1279690:intron | 45.0% | |
| GAGAAGTTCAAGGAGAAGTG+GGG | + | chr8_3:17138051-17138070 | Msa1279690:intron | 45.0% | |
| ATGGCAACATCCTCATATGG+TGG | - | chr8_3:17138108-17138127 | None:intergenic | 45.0% | |
| TAGTCCCTCCTCACTTCAAA+AGG | - | chr8_3:17138180-17138199 | None:intergenic | 45.0% | |
| TAGGGCTATGGTAGGGAATA+AGG | + | chr8_3:17138251-17138270 | Msa1279690:intron | 45.0% | |
| TCTTTCTCCTGGAGTTAGGA+AGG | + | chr8_3:17138326-17138345 | Msa1279690:intron | 45.0% | |
| AAATAGACTGGGGGTTGACA+AGG | + | chr8_3:17138441-17138460 | Msa1279690:intron | 45.0% | |
| AAGGCCTGATTAGACCAGAT+AGG | + | chr8_3:17138460-17138479 | Msa1279690:intron | 45.0% | |
| CCTTCGCTTGAATCTTGCAA+AGG | - | chr8_3:17138693-17138712 | None:intergenic | 45.0% | |
| CCTTTGCAAGATTCAAGCGA+AGG | + | chr8_3:17138690-17138709 | Msa1279690:intron | 45.0% | |
| CCTACCACCTAATGCGATTT+GGG | + | chr8_3:17138827-17138846 | Msa1279690:intron | 45.0% | |
| ATGACCCAAATCGCATTAGG+TGG | - | chr8_3:17138834-17138853 | None:intergenic | 45.0% | |
| TGCATGACCCAAATCGCATT+AGG | - | chr8_3:17138837-17138856 | None:intergenic | 45.0% | |
| !! | GCAGTCTTTAGGACTTGTGA+AGG | + | chr8_3:17139187-17139206 | Msa1279690:intron | 45.0% |
| TCTAAATCTGATCAGGCGAC+AGG | - | chr8_3:17139314-17139333 | None:intergenic | 45.0% | |
| TAAGGACTATTGGGAGAGAC+TGG | + | chr8_3:17139436-17139455 | Msa1279690:intron | 45.0% | |
| AAGGACTATTGGGAGAGACT+GGG | + | chr8_3:17139437-17139456 | Msa1279690:intron | 45.0% | |
| !! | CATTGATTTGACCGTGCATC+AGG | + | chr8_3:17139733-17139752 | Msa1279690:intron | 45.0% |
| TGGAATGAGCAACGTGAGAA+TGG | + | chr8_3:17139764-17139783 | Msa1279690:CDS | 45.0% | |
| GACATATTCCCACTTACAGC+GGG | - | chr8_3:17139802-17139821 | None:intergenic | 45.0% | |
| GGACATATTCCCACTTACAG+CGG | - | chr8_3:17139803-17139822 | None:intergenic | 45.0% | |
| GAATACCTGAAGACCTGGTA+GGG | + | chr8_3:17140091-17140110 | Msa1279690:three_prime_UTR | 45.0% | |
| !! | TCTTATATTATTAATATTAT+CGG | + | chr8_3:17134744-17134763 | Msa1279690:intron | 5.0% |
| ! | TGGCTGTATTCGACTCGAGA+AGG | - | chr8_3:17134194-17134213 | None:intergenic | 50.0% |
| ! | GTGTGTTGGTGAACTTACGC+TGG | - | chr8_3:17134214-17134233 | None:intergenic | 50.0% |
| ATGAAGGAAGCTTGGTTGGG+CGG | - | chr8_3:17134273-17134292 | None:intergenic | 50.0% | |
| CGCCATTGATGAAGGAAGCT+TGG | - | chr8_3:17134281-17134300 | None:intergenic | 50.0% | |
| GGAGTTTCCGCCATTGATGA+AGG | - | chr8_3:17134289-17134308 | None:intergenic | 50.0% | |
| !! | GCGAGAGTTTGAGAGGTGTT+GGG | - | chr8_3:17134310-17134329 | None:intergenic | 50.0% |
| ! | AGCGAGAGTTTGAGAGGTGT+TGG | - | chr8_3:17134311-17134330 | None:intergenic | 50.0% |
| TACCTCAGCGAGAGTTTGAG+AGG | - | chr8_3:17134317-17134336 | None:intergenic | 50.0% | |
| TGGCGAGAGAGTGGTAGTTT+AGG | - | chr8_3:17134918-17134937 | None:intergenic | 50.0% | |
| CTACCACTCTCTCGCCAATT+TGG | + | chr8_3:17134921-17134940 | Msa1279690:intron | 50.0% | |
| CGAAAAACCTGTTGCAGTCG+AGG | + | chr8_3:17135418-17135437 | Msa1279690:CDS | 50.0% | |
| TCAACTTCCTCGACTGCAAC+AGG | - | chr8_3:17135428-17135447 | None:intergenic | 50.0% | |
| GCTTTCTTCAGCAACCACAG+GGG | - | chr8_3:17135519-17135538 | None:intergenic | 50.0% | |
| CTGCTTTCTTCAGCAACCAC+AGG | - | chr8_3:17135521-17135540 | None:intergenic | 50.0% | |
| ! | GCGTTTTCTTCAACAGCAGG+AGG | - | chr8_3:17135554-17135573 | None:intergenic | 50.0% |
| TGCAGATGCGTAGCTGCAAA+GGG | + | chr8_3:17135942-17135961 | Msa1279690:intron | 50.0% | |
| AAACACGCCGTTACGGCTTA+TGG | - | chr8_3:17136784-17136803 | None:intergenic | 50.0% | |
| CTCGGCCACAATAGAGGAAA+AGG | + | chr8_3:17136865-17136884 | Msa1279690:intron | 50.0% | |
| !! | GAATGGCGGATGGCAGAATA+TGG | - | chr8_3:17136924-17136943 | None:intergenic | 50.0% |
| ! | GCATAGTTGTGAATGGCGGA+TGG | - | chr8_3:17136934-17136953 | None:intergenic | 50.0% |
| TAACGACCATTCGAGCTCTG+GGG | - | chr8_3:17137284-17137303 | None:intergenic | 50.0% | |
| CATAACGACCATTCGAGCTC+TGG | - | chr8_3:17137286-17137305 | None:intergenic | 50.0% | |
| GGTCGTTATGCCTGCAACAA+TGG | + | chr8_3:17137296-17137315 | Msa1279690:intron | 50.0% | |
| CATGGTATGGACAAGGAGAG+GGG | + | chr8_3:17137437-17137456 | Msa1279690:intron | 50.0% | |
| ATGGTATGGACAAGGAGAGG+GGG | + | chr8_3:17137438-17137457 | Msa1279690:intron | 50.0% | |
| ATGAACAGTCCCTCCCTAAG+TGG | - | chr8_3:17137525-17137544 | None:intergenic | 50.0% | |
| TTAGGGAGGGACTGTTCATG+TGG | + | chr8_3:17137526-17137545 | Msa1279690:intron | 50.0% | |
| AAAAACAAGCTCACCGGTGG+AGG | + | chr8_3:17137745-17137764 | Msa1279690:intron | 50.0% | |
| ATCCCTCTATACTCCTCCAC+CGG | - | chr8_3:17137761-17137780 | None:intergenic | 50.0% | |
| GAATCTCTGCCTCTCTCTCA+TGG | - | chr8_3:17137947-17137966 | None:intergenic | 50.0% | |
| AGAGAGAGGCAGAGATTCAG+TGG | + | chr8_3:17137949-17137968 | Msa1279690:intron | 50.0% | |
| TGTTAGGGGATTGACGCAGA+TGG | + | chr8_3:17138018-17138037 | Msa1279690:intron | 50.0% | |
| TGGGGCTTACCAATTAGTGC+TGG | + | chr8_3:17138069-17138088 | Msa1279690:intron | 50.0% | |
| ATAGGATGCGCCACCATATG+AGG | + | chr8_3:17138095-17138114 | Msa1279690:intron | 50.0% | |
| TTTGGAGAAAGGTGGGGTCT+AGG | + | chr8_3:17138232-17138251 | Msa1279690:intron | 50.0% | |
| TTGGAGAAAGGTGGGGTCTA+GGG | + | chr8_3:17138233-17138252 | Msa1279690:intron | 50.0% | |
| CTGAAGTCCTTCCTAACTCC+AGG | - | chr8_3:17138336-17138355 | None:intergenic | 50.0% | |
| ACTGCTGCCTAACTCCTATC+TGG | - | chr8_3:17138477-17138496 | None:intergenic | 50.0% | |
| CAGCAGTTGAGCTGTTCTTG+AGG | + | chr8_3:17138490-17138509 | Msa1279690:intron | 50.0% | |
| GCATTAGGTGGTAGGCCATT+TGG | - | chr8_3:17138822-17138841 | None:intergenic | 50.0% | |
| GCCTACCACCTAATGCGATT+TGG | + | chr8_3:17138826-17138845 | Msa1279690:intron | 50.0% | |
| CCCAAATCGCATTAGGTGGT+AGG | - | chr8_3:17138830-17138849 | None:intergenic | 50.0% | |
| ! | TTACCAAAGGGGCTAGTGCT+AGG | - | chr8_3:17138958-17138977 | None:intergenic | 50.0% |
| TTTCTCTCGGGCGAATCTGA+TGG | - | chr8_3:17139153-17139172 | None:intergenic | 50.0% | |
| TGTAAGGGGGGAGACAAGTT+AGG | + | chr8_3:17139404-17139423 | Msa1279690:intron | 50.0% | |
| GTAAGGGGGGAGACAAGTTA+GGG | + | chr8_3:17139405-17139424 | Msa1279690:intron | 50.0% | |
| CCATCTGTCAACCTGATGCA+CGG | - | chr8_3:17139747-17139766 | None:intergenic | 50.0% | |
| CGTGAGAATGGAACATTCCC+AGG | + | chr8_3:17139776-17139795 | Msa1279690:CDS | 50.0% | |
| ATGGGGAATACCTGAAGACC+TGG | + | chr8_3:17140086-17140105 | Msa1279690:three_prime_UTR | 50.0% | |
| GGAATACCTGAAGACCTGGT+AGG | + | chr8_3:17140090-17140109 | Msa1279690:three_prime_UTR | 50.0% | |
| GTTCTTTCAACGTCCCTACC+AGG | - | chr8_3:17140107-17140126 | None:intergenic | 50.0% | |
| CACCTCTCAAACTCTCGCTG+AGG | + | chr8_3:17134312-17134331 | Msa1279690:CDS | 55.0% | |
| GGACCAAATTGGCGAGAGAG+TGG | - | chr8_3:17134927-17134946 | None:intergenic | 55.0% | |
| TCCACAGGAGTAGCCTCCTT+TGG | - | chr8_3:17135455-17135474 | None:intergenic | 55.0% | |
| TTCTTCAACAGCAGGAGGGG+TGG | - | chr8_3:17135549-17135568 | None:intergenic | 55.0% | |
| CTACTGGAGCAGTCTCAAGC+TGG | - | chr8_3:17135760-17135779 | None:intergenic | 55.0% | |
| GTGCAGATGCGTAGCTGCAA+AGG | + | chr8_3:17135941-17135960 | Msa1279690:intron | 55.0% | |
| TGCTCTTTGCCCTGGCGAAT+GGG | + | chr8_3:17136007-17136026 | Msa1279690:CDS | 55.0% | |
| TTGTGAAGGGATACCTGCCG+TGG | + | chr8_3:17136753-17136772 | Msa1279690:intron | 55.0% | |
| ! | AAGTGGCTCGGCCACAATAG+AGG | + | chr8_3:17136859-17136878 | Msa1279690:intron | 55.0% |
| CTCTATCCCCAGAGCTCGAA+TGG | + | chr8_3:17137275-17137294 | Msa1279690:intron | 55.0% | |
| TGGTATGGACAAGGAGAGGG+GGG | + | chr8_3:17137439-17137458 | Msa1279690:intron | 55.0% | |
| ! | TCACCGGTGGAGGAGTATAG+AGG | + | chr8_3:17137755-17137774 | Msa1279690:intron | 55.0% |
| ! | CACCGGTGGAGGAGTATAGA+GGG | + | chr8_3:17137756-17137775 | Msa1279690:intron | 55.0% |
| ! | AAAGGTGGGGTCTAGGGCTA+TGG | + | chr8_3:17138239-17138258 | Msa1279690:intron | 55.0% |
| ! | TGGGGTCTAGGGCTATGGTA+GGG | + | chr8_3:17138244-17138263 | Msa1279690:intron | 55.0% |
| CTGGGCCCTCTTGAATCACA+TGG | + | chr8_3:17139455-17139474 | Msa1279690:intron | 55.0% | |
| !! | CCGTGCATCAGGTTGACAGA+TGG | + | chr8_3:17139744-17139763 | Msa1279690:intron | 55.0% |
| AACGTCCCTACCAGGTCTTC+AGG | - | chr8_3:17140099-17140118 | None:intergenic | 55.0% | |
| AAGCTTGGTTGGGCGGCTGT+AGG | - | chr8_3:17134266-17134285 | None:intergenic | 60.0% | |
| GCCAAAGGAGGCTACTCCTG+TGG | + | chr8_3:17135451-17135470 | Msa1279690:CDS | 60.0% | |
| ACCAATTCCTGCTGCCCCTG+TGG | + | chr8_3:17135502-17135521 | Msa1279690:CDS | 60.0% | |
| ACCACAGGGGCAGCAGGAAT+TGG | - | chr8_3:17135506-17135525 | None:intergenic | 60.0% | |
| GTGCTCTTTGCCCTGGCGAA+TGG | + | chr8_3:17136006-17136025 | Msa1279690:CDS | 60.0% | |
| TACGGCTTATGGCAGCGCCA+CGG | - | chr8_3:17136773-17136792 | None:intergenic | 60.0% | |
| GGCGCTGCCATAAGCCGTAA+CGG | + | chr8_3:17136774-17136793 | Msa1279690:intron | 60.0% | |
| GCGCGCAGAACTGAAGTTGC+AGG | + | chr8_3:17137839-17137858 | Msa1279690:intron | 60.0% | |
| ! | GTGGGGTCTAGGGCTATGGT+AGG | + | chr8_3:17138243-17138262 | Msa1279690:intron | 60.0% |
| CTGCCTAGCACTAGCCCCTT+TGG | + | chr8_3:17138952-17138971 | Msa1279690:intron | 60.0% | |
| ATTCCCAGGCCCGCTGTAAG+TGG | + | chr8_3:17139790-17139809 | Msa1279690:exon | 60.0% | |
| TTCCCAGGCCCGCTGTAAGT+GGG | + | chr8_3:17139791-17139810 | Msa1279690:exon | 60.0% | |
| TTCCCACTTACAGCGGGCCT+GGG | - | chr8_3:17139796-17139815 | None:intergenic | 60.0% | |
| ATTCCCACTTACAGCGGGCC+TGG | - | chr8_3:17139797-17139816 | None:intergenic | 60.0% | |
| TCAGCAACCACAGGGGCAGC+AGG | - | chr8_3:17135512-17135531 | None:intergenic | 65.0% | |
| GCTTATGGCAGCGCCACGGC+AGG | - | chr8_3:17136769-17136788 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 17134185 | 17140139 | 17134185 | ID=Msa1279690;Name=Msa1279690 |
| chr8_3 | mRNA | 17134185 | 17140139 | 17134185 | ID=Msa1279690-mRNA-1;Parent=Msa1279690;Name=Msa1279690-mRNA-1;_AED=0.09;_eAED=0.09;_QI=110|1|1|1|0.75|1|5|331|183 |
| chr8_3 | exon | 17134185 | 17134333 | 17134185 | ID=Msa1279690-mRNA-1:exon:6607;Parent=Msa1279690-mRNA-1 |
| chr8_3 | exon | 17135359 | 17135652 | 17135359 | ID=Msa1279690-mRNA-1:exon:6608;Parent=Msa1279690-mRNA-1 |
| chr8_3 | exon | 17135761 | 17135843 | 17135761 | ID=Msa1279690-mRNA-1:exon:6609;Parent=Msa1279690-mRNA-1 |
| chr8_3 | exon | 17135947 | 17136028 | 17135947 | ID=Msa1279690-mRNA-1:exon:6610;Parent=Msa1279690-mRNA-1 |
| chr8_3 | exon | 17139755 | 17140139 | 17139755 | ID=Msa1279690-mRNA-1:exon:6611;Parent=Msa1279690-mRNA-1 |
| chr8_3 | five_prime_UTR | 17134185 | 17134294 | 17134185 | ID=Msa1279690-mRNA-1:five_prime_utr;Parent=Msa1279690-mRNA-1 |
| chr8_3 | CDS | 17134295 | 17134333 | 17134295 | ID=Msa1279690-mRNA-1:cds;Parent=Msa1279690-mRNA-1 |
| chr8_3 | CDS | 17135359 | 17135652 | 17135359 | ID=Msa1279690-mRNA-1:cds;Parent=Msa1279690-mRNA-1 |
| chr8_3 | CDS | 17135761 | 17135843 | 17135761 | ID=Msa1279690-mRNA-1:cds;Parent=Msa1279690-mRNA-1 |
| chr8_3 | CDS | 17135947 | 17136028 | 17135947 | ID=Msa1279690-mRNA-1:cds;Parent=Msa1279690-mRNA-1 |
| chr8_3 | CDS | 17139755 | 17139808 | 17139755 | ID=Msa1279690-mRNA-1:cds;Parent=Msa1279690-mRNA-1 |
| chr8_3 | three_prime_UTR | 17139809 | 17140139 | 17139809 | ID=Msa1279690-mRNA-1:three_prime_utr;Parent=Msa1279690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
