AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0260270

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0260270 MtrunA17_Chr2g0332571 99.333 150 1 0 1 150 1 150 2.48e-109 307
Msa0260270 MtrunA17_Chr4g0003811 75.325 154 28 4 1 149 1 149 2.48e-75 221
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0260270 AT1G80230.1 61.392 158 42 3 1 140 1 157 5.64e-59 181
Msa0260270 AT3G15640.2 58.491 159 45 4 1 140 1 157 1.55e-52 164
Msa0260270 AT3G15640.1 57.862 159 47 3 1 140 1 158 1.04e-51 162
Msa0260270 AT1G52710.1 59.302 86 35 0 65 150 4 89 2.01e-33 113

Find 107 sgRNAs with CRISPR-Local

Find 332 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGCGTTGCTATCAATTATT+AGG 0.262008 2_2:+57797364 None:intergenic
AGCATGATGTTGTCTGGTTT+TGG 0.271011 2_2:-57798920 Msa0260270:CDS
GAGAATGAGATGAAGAAGTT+AGG 0.298612 2_2:+57801606 None:intergenic
TGTCCCATGTTTGAATTCTA+AGG 0.300229 2_2:+57797197 None:intergenic
GGAAACTTTGGTTCCTTAAT+CGG 0.319479 2_2:-57797012 Msa0260270:three_prime_UTR
CCGTCACGTGCTAATTCGTT+TGG 0.329404 2_2:-57801828 Msa0260270:five_prime_UTR
TCACGTTGCAATGCTTTGTT+TGG 0.352341 2_2:-57797495 Msa0260270:three_prime_UTR
GGAATGTAAAACAATCTCTT+TGG 0.352887 2_2:+57797530 None:intergenic
CGCGCTCAAGTTTAACTTCA+AGG 0.362659 2_2:+57801804 None:intergenic
ATTAAGCTACAAATCCTGTT+AGG 0.366895 2_2:-57797404 Msa0260270:three_prime_UTR
TTAAATTAAGAGGGAAACTT+TGG 0.368684 2_2:-57797024 Msa0260270:three_prime_UTR
GGGCACTCAAAATCCGATTA+AGG 0.369464 2_2:+57796999 None:intergenic
GACCACCCTGAAGGTCCTTT+TGG 0.374661 2_2:-57800670 Msa0260270:CDS
TTTGAGATCTACGGTGGTTA+CGG 0.386481 2_2:+57801674 None:intergenic
TTCGTGCCAAAAGGACCTTC+AGG 0.388454 2_2:+57800664 None:intergenic
AGTCAAGTCACAACAGTAAC+TGG 0.389318 2_2:+57797114 None:intergenic
CGGCGTCGTTTGATTGGAAA+TGG 0.390861 2_2:+57801694 None:intergenic
GGACCTGGCGGTGATCCTTA+TGG 0.392481 2_2:-57797598 Msa0260270:CDS
CGTCACGTGCTAATTCGTTT+GGG 0.403376 2_2:-57801827 Msa0260270:five_prime_UTR
CGTTCATGACCGGTAGCAAT+TGG 0.405824 2_2:+57801404 None:intergenic
TACTATAACAGAAGGATTGT+TGG 0.415818 2_2:-57799086 Msa0260270:CDS
GGCGACGTGGCGGCTGAGGC+CGG 0.418601 2_2:+57801550 None:intergenic
TATACACCCCACCATCAAAT+GGG 0.419953 2_2:-57801880 None:intergenic
CTATTTGAAATTAAATTAAG+AGG 0.427196 2_2:-57797034 Msa0260270:three_prime_UTR
AGAATGAGATGAAGAAGTTA+GGG 0.429164 2_2:+57801607 None:intergenic
TGCACACACTGGACATTCAT+GGG 0.432638 2_2:+57798881 None:intergenic
TGGTTACGGCGTCGTTTGAT+TGG 0.435570 2_2:+57801688 None:intergenic
GTGCACACACTGGACATTCA+TGG 0.436671 2_2:+57798880 None:intergenic
TGTTGGATGCCCCGGTGGTG+AGG 0.446924 2_2:-57799069 Msa0260270:CDS
CGCCACGTCGCCACACAATC+AGG 0.449393 2_2:-57801539 Msa0260270:intron
ATATACACCCCACCATCAAA+TGG 0.450852 2_2:-57801881 None:intergenic
CACTTACCACCCTCACCACC+GGG 0.453277 2_2:+57799059 None:intergenic
CTTCAGGGTGGTCTATTTCA+AGG 0.458207 2_2:+57800680 None:intergenic
GGCGGCTGAGGCCGGCGAAT+CGG 0.463992 2_2:+57801558 None:intergenic
ACACTTACCACCCTCACCAC+CGG 0.473884 2_2:+57799058 None:intergenic
GTTGTGACTTGACTGTTGGT+TGG 0.474792 2_2:-57797105 Msa0260270:three_prime_UTR
GTTGGATGCCCCGGTGGTGA+GGG 0.475405 2_2:-57799068 Msa0260270:CDS
TACTGTTGTGACTTGACTGT+TGG 0.480725 2_2:-57797109 Msa0260270:three_prime_UTR
TTTGGAAAATTTATTCCTGA+AGG 0.482002 2_2:+57797548 None:intergenic
GTGTGGCGACGTGGCGGCTG+AGG 0.482725 2_2:+57801546 None:intergenic
TCTGATCAATGGTGTCCATA+AGG 0.484112 2_2:+57797583 None:intergenic
TTACTAACCTTCGTGCCAAA+AGG 0.484133 2_2:+57800655 None:intergenic
CATCCTCGATCCGCCGTCGC+CGG 0.485063 2_2:-57801584 Msa0260270:CDS
AGCCTCCGCTTTGATCCATT+AGG 0.487703 2_2:-57797243 Msa0260270:three_prime_UTR
GGTTGTGATTGTAGCTGGTT+CGG 0.494202 2_2:-57801453 Msa0260270:intron
AGGATGAGCATGATGTTGTC+TGG 0.496376 2_2:-57798926 Msa0260270:CDS
GGCGAATCGGAGACCGGCGA+CGG 0.501941 2_2:+57801571 None:intergenic
CAGCTTGAAGTGGTGGGACC+TGG 0.505788 2_2:-57797613 Msa0260270:CDS
TGCGTTACAGCTTGAAGTGG+TGG 0.516079 2_2:-57797620 Msa0260270:intron
GTCGCCGGTCTCCGATTCGC+CGG 0.516296 2_2:-57801569 Msa0260270:CDS
AAACATCAGTTGGTGGATGA+AGG 0.517592 2_2:+57797156 None:intergenic
TTCTGTGATTATTTAGACAC+AGG 0.517900 2_2:-57797438 Msa0260270:three_prime_UTR
TGAAAATACTGTGCACACAC+TGG 0.523295 2_2:+57798870 None:intergenic
AGAAGGATTGTTGGATGCCC+CGG 0.526647 2_2:-57799077 Msa0260270:CDS
GTTTGATTGGAAATGGAAGA+AGG 0.531244 2_2:+57801701 None:intergenic
AAACTGCAGCATCTGATCAA+TGG 0.533620 2_2:+57797572 None:intergenic
TTTAGCACCTATCCACAAAA+GGG 0.535268 2_2:-57797288 Msa0260270:three_prime_UTR
TCGTGCCAAAAGGACCTTCA+GGG 0.538959 2_2:+57800665 None:intergenic
TTAAGTCTTACTATAACAGA+AGG 0.543566 2_2:-57799094 Msa0260270:CDS
GAGGCCGGCGAATCGGAGAC+CGG 0.548914 2_2:+57801565 None:intergenic
TAGTAAGACTTAACAACGGC+AGG 0.550387 2_2:+57799104 None:intergenic
GCGTTACAGCTTGAAGTGGT+GGG 0.554549 2_2:-57797619 Msa0260270:intron
AATCTCCTCACGTTCATGAC+CGG 0.554757 2_2:+57801394 None:intergenic
TATTTGAAATTAAATTAAGA+GGG 0.555579 2_2:-57797033 Msa0260270:three_prime_UTR
AACGATTCTCCGCCACATGA+TGG 0.566084 2_2:+57801649 None:intergenic
GGATGCCCCGGTGGTGAGGG+TGG 0.570608 2_2:-57799065 Msa0260270:intron
GATGTAGTTCCAATTGCTAC+CGG 0.573966 2_2:-57801413 Msa0260270:CDS
TAGTCCTTAGAATTCAAACA+TGG 0.582114 2_2:-57797201 Msa0260270:three_prime_UTR
GGAAGAACGAAGCAGAGTTG+AGG 0.583003 2_2:+57801722 None:intergenic
CAAACGAATTAGCACGTGAC+GGG 0.584689 2_2:+57801829 None:intergenic
GAATCGGAGACCGGCGACGG+CGG 0.589478 2_2:+57801574 None:intergenic
GGACATGTTAATCCCTCCGT+CGG 0.589725 2_2:-57797179 Msa0260270:three_prime_UTR
AGACCGGCGACGGCGGATCG+AGG 0.592370 2_2:+57801581 None:intergenic
GGTGGATGAAGGCCGACGGA+GGG 0.593535 2_2:+57797167 None:intergenic
TGTCCATAAGGATCACCGCC+AGG 0.601139 2_2:+57797595 None:intergenic
CACCTAATGGATCAAAGCGG+AGG 0.601580 2_2:+57797241 None:intergenic
TCTGTGATTATTTAGACACA+GGG 0.605541 2_2:-57797437 Msa0260270:three_prime_UTR
TAGGTGCTAAAAGTAGCTGC+AGG 0.612310 2_2:+57797300 None:intergenic
ATGATGGTGTTTGAGATCTA+CGG 0.616818 2_2:+57801665 None:intergenic
ATACACCCCACCATCAAATG+GGG 0.619440 2_2:-57801879 Msa0260270:five_prime_UTR
TTCTGCGTTACAGCTTGAAG+TGG 0.625576 2_2:-57797623 Msa0260270:intron
TGGTGGATGAAGGCCGACGG+AGG 0.626007 2_2:+57797166 None:intergenic
TTTGACTGGTCTAGACCTTG+CGG 0.626127 2_2:-57797471 Msa0260270:three_prime_UTR
TGCTACCGGTCATGAACGTG+AGG 0.630864 2_2:-57801399 Msa0260270:CDS
TTCGGTGAAGAAGACAGTTG+AGG 0.641042 2_2:-57801435 Msa0260270:CDS
AGTTGGTGGATGAAGGCCGA+CGG 0.645942 2_2:+57797163 None:intergenic
GGAGATTCAAGCTGATCTTG+AGG 0.651732 2_2:-57801378 Msa0260270:intron
AGTCCTTAGAATTCAAACAT+GGG 0.652398 2_2:-57797200 Msa0260270:three_prime_UTR
CAAGTCACAACAGTAACTGG+TGG 0.653149 2_2:+57797117 None:intergenic
CTTGAAATAGACCACCCTGA+AGG 0.658668 2_2:-57800679 Msa0260270:CDS
GCACACACTGGACATTCATG+GGG 0.668546 2_2:+57798882 None:intergenic
TACCTGATTGTGTGGCGACG+TGG 0.669661 2_2:+57801537 None:intergenic
CAGAAACTCTCTGAACCGCA+AGG 0.670121 2_2:+57797456 None:intergenic
CCAAACGAATTAGCACGTGA+CGG 0.679687 2_2:+57801828 None:intergenic
CTTGAAGTGGTGGGACCTGG+CGG 0.684429 2_2:-57797610 Msa0260270:CDS
AGATCTCAAACACCATCATG+TGG 0.684707 2_2:-57801661 Msa0260270:exon
AGTGAAGATACCTGATTGTG+TGG 0.687822 2_2:+57801529 None:intergenic
CTGATTGTGTGGCGACGTGG+CGG 0.691244 2_2:+57801540 None:intergenic
TACACCCCACCATCAAATGG+GGG 0.694244 2_2:-57801878 Msa0260270:five_prime_UTR
TCTCAAACACCATCATGTGG+CGG 0.696333 2_2:-57801658 Msa0260270:exon
GTGATTATTTAGACACAGGG+TGG 0.700670 2_2:-57797434 Msa0260270:three_prime_UTR
AGGATTGTTGGATGCCCCGG+TGG 0.708518 2_2:-57799074 Msa0260270:CDS
TGCCAAAAGGACCTTCAGGG+TGG 0.711901 2_2:+57800668 None:intergenic
GTTATAGTAAGACTTAACAA+CGG 0.724381 2_2:+57799100 None:intergenic
ATGGTGTTTGAGATCTACGG+TGG 0.739505 2_2:+57801668 None:intergenic
TTTCACCTAATGGATCAAAG+CGG 0.742764 2_2:+57797238 None:intergenic
ACTTACCACCCTCACCACCG+GGG 0.751343 2_2:+57799060 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTGAAATTAAATTAAGA+GGG - chr2_2:57801839-57801858 Msa0260270:five_prime_UTR 10.0%
!! ACACAAGTTATAAATAAAAA+TGG + chr2_2:57797625-57797644 None:intergenic 15.0%
!!! TGATTTTAAATTTTAATCTG+AGG - chr2_2:57797752-57797771 Msa0260270:intron 15.0%
!! CATTTAAAAACTTTAGTAAT+GGG + chr2_2:57797864-57797883 None:intergenic 15.0%
!! ACATTTAAAAACTTTAGTAA+TGG + chr2_2:57797865-57797884 None:intergenic 15.0%
!!! ACTAAAGTTTTTAAATGTTT+TGG - chr2_2:57797867-57797886 Msa0260270:intron 15.0%
!!! CTAAAGTTTTTAAATGTTTT+GGG - chr2_2:57797868-57797887 Msa0260270:intron 15.0%
!!! TAAAGTTTTTAAATGTTTTG+GGG - chr2_2:57797869-57797888 Msa0260270:intron 15.0%
!!! TTTGTATTTTTTGTTTGTTT+AGG - chr2_2:57798159-57798178 Msa0260270:intron 15.0%
!!! TTGTATTTTTTGTTTGTTTA+GGG - chr2_2:57798160-57798179 Msa0260270:intron 15.0%
!!! AAAATCACTTTTCTAAATTA+AGG + chr2_2:57798407-57798426 None:intergenic 15.0%
!!! TTAATTTAGAAAAGTGATTT+TGG - chr2_2:57798406-57798425 Msa0260270:intron 15.0%
!! TTTATACTTTAATTACCTAA+AGG - chr2_2:57798476-57798495 Msa0260270:intron 15.0%
!! TTATACTTTAATTACCTAAA+GGG - chr2_2:57798477-57798496 Msa0260270:intron 15.0%
!!! TATTTAATCTTTTTGAAGTT+TGG - chr2_2:57798626-57798645 Msa0260270:intron 15.0%
!! ATATATGATAGAACATTATA+GGG - chr2_2:57798737-57798756 Msa0260270:intron 15.0%
!!! ATTTTTGAAGAATGATAATT+TGG + chr2_2:57798960-57798979 None:intergenic 15.0%
!!! ATGTTTATAACTATTTTTAC+TGG - chr2_2:57800040-57800059 Msa0260270:intron 15.0%
!! TAAAATAAATAGGAATATGT+TGG + chr2_2:57800415-57800434 None:intergenic 15.0%
!! GAAAAAGATGTAAAATAAAT+AGG + chr2_2:57800425-57800444 None:intergenic 15.0%
!! TAGAAAAAATTACTTGAAAA+TGG - chr2_2:57801063-57801082 Msa0260270:intron 15.0%
!!! ATTTAACTAGAATTTGAAAT+TGG + chr2_2:57801130-57801149 None:intergenic 15.0%
!!! CTATTTGAAATTAAATTAAG+AGG - chr2_2:57801838-57801857 Msa0260270:five_prime_UTR 15.0%
!!! GATTTTGATGAATTTTGATT+TGG - chr2_2:57797398-57797417 Msa0260270:three_prime_UTR 20.0%
!! ACAAAATGGAAAAATAAAAG+TGG + chr2_2:57797681-57797700 None:intergenic 20.0%
!!! TTTAGTAATGGGATAATAAA+TGG + chr2_2:57797853-57797872 None:intergenic 20.0%
!! TATTTCCAAAACTATAGTAA+TGG - chr2_2:57797931-57797950 Msa0260270:intron 20.0%
!!! TTTGAAATAGCAACTATATT+GGG + chr2_2:57797995-57798014 None:intergenic 20.0%
!!! TTTTGAAATAGCAACTATAT+TGG + chr2_2:57797996-57798015 None:intergenic 20.0%
!!! CATATTATATAGGTTACTTT+TGG - chr2_2:57798116-57798135 Msa0260270:intron 20.0%
!!! AATGGTTTTGGTTTATTTTT+TGG - chr2_2:57798378-57798397 Msa0260270:intron 20.0%
!!! TGTGTTGTTAAAAATCATTA+TGG - chr2_2:57798450-57798469 Msa0260270:intron 20.0%
!!! TTTTATCTTACAATTGAGTA+TGG + chr2_2:57798596-57798615 None:intergenic 20.0%
!! CTCAATTGTAAGATAAAATA+TGG - chr2_2:57798598-57798617 Msa0260270:intron 20.0%
!! AATAGTTTCTCTTTAAACTA+AGG + chr2_2:57798679-57798698 None:intergenic 20.0%
!! GATATATGATAGAACATTAT+AGG - chr2_2:57798736-57798755 Msa0260270:intron 20.0%
!!! TATTTTCTGTCTTTAAACTT+TGG + chr2_2:57799476-57799495 None:intergenic 20.0%
!! AAAGTTTAAAGACAGAAAAT+AGG - chr2_2:57799475-57799494 Msa0260270:intron 20.0%
!! CAAGTCATTCAAATTATTAA+AGG + chr2_2:57800218-57800237 None:intergenic 20.0%
!!! TTTAAATTCTGCACAAATTT+TGG + chr2_2:57800843-57800862 None:intergenic 20.0%
!! AGTCATTTATATGAAAAATG+TGG - chr2_2:57801801-57801820 Msa0260270:five_prime_UTR 20.0%
! ATTCATCAAAATCAAGAACA+AGG + chr2_2:57797391-57797410 None:intergenic 25.0%
! ATATCAGAATAAGAGTAGTT+CGG + chr2_2:57797724-57797743 None:intergenic 25.0%
!!! CTTGTAAGATTTTTCAATCA+TGG - chr2_2:57797791-57797810 Msa0260270:intron 25.0%
! TTGAAATAGCAACTATATTG+GGG + chr2_2:57797994-57798013 None:intergenic 25.0%
! ACATTGTACTAAATAGCATA+TGG - chr2_2:57798017-57798036 Msa0260270:intron 25.0%
! GACAAGACTTCATATTATAT+AGG - chr2_2:57798106-57798125 Msa0260270:intron 25.0%
!!! ATTTTTTGTTTGTTTAGGGA+AGG - chr2_2:57798164-57798183 Msa0260270:intron 25.0%
! ACAATATGAAGAATGAAACA+GGG + chr2_2:57798510-57798529 None:intergenic 25.0%
! TTCATTATTTCAGTTGCAAA+TGG - chr2_2:57798553-57798572 Msa0260270:intron 25.0%
! AAAGACAATGAGAATTAGAT+TGG - chr2_2:57798894-57798913 Msa0260270:CDS 25.0%
! TTTGGAGGTAAAAAAATGTT+TGG + chr2_2:57798942-57798961 None:intergenic 25.0%
! TTTGAAGAATGATAATTTGG+AGG + chr2_2:57798957-57798976 None:intergenic 25.0%
!! TACAAAACTGATTATTGACT+TGG - chr2_2:57799108-57799127 Msa0260270:CDS 25.0%
!!! TGATTATTGACTTGGAATTT+GGG - chr2_2:57799116-57799135 Msa0260270:intron 25.0%
!! ATATAGGTATTGTAGATTGA+TGG + chr2_2:57799155-57799174 None:intergenic 25.0%
!! TAAAGATGTTTTATGAAGGT+TGG - chr2_2:57799500-57799519 Msa0260270:intron 25.0%
! TTGAAGTTTCCAAAGTTTAA+AGG - chr2_2:57799464-57799483 Msa0260270:intron 25.0%
!! CACATTTTTCCTTTAAACTT+TGG + chr2_2:57799608-57799627 None:intergenic 25.0%
! TGCTTAAAGATGTATTATGA+AGG - chr2_2:57799626-57799645 Msa0260270:intron 25.0%
! GTTATAGTAAGACTTAACAA+CGG + chr2_2:57799775-57799794 None:intergenic 25.0%
! TTAAGTCTTACTATAACAGA+AGG - chr2_2:57799778-57799797 Msa0260270:intron 25.0%
!!! AACTTGTTTTTTTAATGCAG+AGG - chr2_2:57799926-57799945 Msa0260270:intron 25.0%
! ATTTAACTCCAAATTGATCT+TGG + chr2_2:57800069-57800088 None:intergenic 25.0%
!!! TGTCAAAACACAGATTTTTT+AGG + chr2_2:57800184-57800203 None:intergenic 25.0%
! TTATCTGACAATTGATTGTT+TGG - chr2_2:57800255-57800274 Msa0260270:intron 25.0%
! AAGGATCTTATAATTAGGAA+TGG + chr2_2:57800323-57800342 None:intergenic 25.0%
! GTCAAAAGGATCTTATAATT+AGG + chr2_2:57800328-57800347 None:intergenic 25.0%
! GGACTAATAAAATTGTCAAA+AGG + chr2_2:57800342-57800361 None:intergenic 25.0%
! TAAAGTAACTCTTTCTCATA+TGG - chr2_2:57800477-57800496 Msa0260270:intron 25.0%
! AAAGTAACTCTTTCTCATAT+GGG - chr2_2:57800478-57800497 Msa0260270:intron 25.0%
! ATTACGGGAATTAAGAAAAT+TGG + chr2_2:57800552-57800571 None:intergenic 25.0%
!! TTTTCTTAATTCCCGTAATT+TGG - chr2_2:57800553-57800572 Msa0260270:intron 25.0%
! TAACTCGTCAATTACTTTAA+AGG + chr2_2:57800744-57800763 None:intergenic 25.0%
!! AGTTAGAGAAATGAATGTTT+TGG - chr2_2:57800759-57800778 Msa0260270:intron 25.0%
! TGTTTGATATAAAGAAACCA+CGG - chr2_2:57800925-57800944 Msa0260270:intron 25.0%
! ATTTAAATAATATGGACGAG+AGG + chr2_2:57801015-57801034 None:intergenic 25.0%
!!! CTGCACTGATTTAAATAATA+TGG + chr2_2:57801023-57801042 None:intergenic 25.0%
!!! GTGGTGCTAATTAATTTTTT+TGG - chr2_2:57801226-57801245 Msa0260270:intron 25.0%
! TTTGGAAAATTTATTCCTGA+AGG + chr2_2:57801327-57801346 None:intergenic 25.0%
! TTAAATTAAGAGGGAAACTT+TGG - chr2_2:57801848-57801867 Msa0260270:five_prime_UTR 25.0%
AGAATGAGATGAAGAAGTTA+GGG + chr2_2:57797268-57797287 None:intergenic 30.0%
!! GATTTTTCAATCATGGATAG+CGG - chr2_2:57797798-57797817 Msa0260270:intron 30.0%
TTGGGGTGAATAAAAAGATT+TGG - chr2_2:57797886-57797905 Msa0260270:intron 30.0%
TTCCAAAACTATAGTAATGG+AGG - chr2_2:57797934-57797953 Msa0260270:intron 30.0%
! TTCCTCCATTACTATAGTTT+TGG + chr2_2:57797939-57797958 None:intergenic 30.0%
! TATAGTAATGGAGGAAATGT+AGG - chr2_2:57797943-57797962 Msa0260270:intron 30.0%
GAAATGTAGGCAATAGAAAA+TGG - chr2_2:57797956-57797975 Msa0260270:intron 30.0%
TTGTACTAAATAGCATATGG+TGG - chr2_2:57798020-57798039 Msa0260270:intron 30.0%
ACAATTATATATGCAAGCTG+AGG - chr2_2:57798257-57798276 Msa0260270:intron 30.0%
TTGGCAAAACTAATGTTGTT+TGG - chr2_2:57798425-57798444 Msa0260270:intron 30.0%
GACAATATGAAGAATGAAAC+AGG + chr2_2:57798511-57798530 None:intergenic 30.0%
! CAGTGCTTCTGTTAATTTTA+TGG + chr2_2:57799025-57799044 None:intergenic 30.0%
AAATTGCAAAGACATGTAGA+AGG - chr2_2:57799078-57799097 Msa0260270:CDS 30.0%
!! CTGATTATTGACTTGGAATT+TGG - chr2_2:57799115-57799134 Msa0260270:intron 30.0%
GCTTCTGTATCGAATTATAT+AGG + chr2_2:57799171-57799190 None:intergenic 30.0%
TGCTTACATTGGATATTCTT+TGG - chr2_2:57799282-57799301 Msa0260270:intron 30.0%
TGAGGATATTGGTAAATTGT+TGG - chr2_2:57799314-57799333 Msa0260270:intron 30.0%
AAAACATGTATTAGACAACG+TGG + chr2_2:57799702-57799721 None:intergenic 30.0%
TACTATAACAGAAGGATTGT+TGG - chr2_2:57799786-57799805 Msa0260270:intron 30.0%
TGGTGATAAGTACTAGAATT+TGG - chr2_2:57799882-57799901 Msa0260270:intron 30.0%
GATCTTATAATTAGGAATGG+AGG + chr2_2:57800320-57800339 None:intergenic 30.0%
CCAAAGAGATCTTATGAAAA+GGG + chr2_2:57800363-57800382 None:intergenic 30.0%
ACCAAAGAGATCTTATGAAA+AGG + chr2_2:57800364-57800383 None:intergenic 30.0%
ATATATGTCACTGTCATAGA+GGG + chr2_2:57800645-57800664 None:intergenic 30.0%
TATATATGTCACTGTCATAG+AGG + chr2_2:57800646-57800665 None:intergenic 30.0%
ACAAAACATAAGCTCAGATA+TGG + chr2_2:57800908-57800927 None:intergenic 30.0%
GAAAATGGAATAAGAGTAGT+TGG - chr2_2:57801078-57801097 Msa0260270:intron 30.0%
ATACAGATGACCATTTCAAA+TGG - chr2_2:57801148-57801167 Msa0260270:intron 30.0%
TACAGATGACCATTTCAAAT+GGG - chr2_2:57801149-57801168 Msa0260270:intron 30.0%
!!! TTTTGCATTACAGCTTTAAG+TGG - chr2_2:57801207-57801226 Msa0260270:intron 30.0%
GGAATGTAAAACAATCTCTT+TGG + chr2_2:57801345-57801364 None:intergenic 30.0%
TTCTGTGATTATTTAGACAC+AGG - chr2_2:57801434-57801453 Msa0260270:CDS 30.0%
TCTGTGATTATTTAGACACA+GGG - chr2_2:57801435-57801454 Msa0260270:CDS 30.0%
ATTAAGCTACAAATCCTGTT+AGG - chr2_2:57801468-57801487 Msa0260270:intron 30.0%
TAGCGTTGCTATCAATTATT+AGG + chr2_2:57801511-57801530 None:intergenic 30.0%
TAGTCCTTAGAATTCAAACA+TGG - chr2_2:57801671-57801690 Msa0260270:five_prime_UTR 30.0%
AGTCCTTAGAATTCAAACAT+GGG - chr2_2:57801672-57801691 Msa0260270:five_prime_UTR 30.0%
TTCAACACAAAAACATCAGT+TGG + chr2_2:57801729-57801748 None:intergenic 30.0%
TAAATCAAACCCCCATTTGA+TGG + chr2_2:57797006-57797025 None:intergenic 35.0%
! CAAATGGGGGTTTGATTTAT+TGG - chr2_2:57797007-57797026 Msa0260270:three_prime_UTR 35.0%
GTTTGATTGGAAATGGAAGA+AGG + chr2_2:57797174-57797193 None:intergenic 35.0%
! ATGATGGTGTTTGAGATCTA+CGG + chr2_2:57797210-57797229 None:intergenic 35.0%
! ATGAAGAAGTTAGGGTTTTG+AGG + chr2_2:57797260-57797279 None:intergenic 35.0%
GAGAATGAGATGAAGAAGTT+AGG + chr2_2:57797269-57797288 None:intergenic 35.0%
GGCATAGGAAATTGACAAAA+TGG + chr2_2:57797695-57797714 None:intergenic 35.0%
ATAAGAGTAGTTCGGATTCA+AGG + chr2_2:57797716-57797735 None:intergenic 35.0%
ATAGCAACTATATTGGGGTT+AGG + chr2_2:57797989-57798008 None:intergenic 35.0%
CAACTAATTCACACACACAT+AGG + chr2_2:57798327-57798346 None:intergenic 35.0%
! GTGTGAATTAGTTGTTTCCA+AGG - chr2_2:57798333-57798352 Msa0260270:intron 35.0%
!! TTCCAAGGTTGATTTTGATG+TGG - chr2_2:57798348-57798367 Msa0260270:intron 35.0%
!! TCCAAGGTTGATTTTGATGT+GGG - chr2_2:57798349-57798368 Msa0260270:intron 35.0%
TAAGAAAGACCCAGAGATTA+AGG - chr2_2:57798698-57798717 Msa0260270:intron 35.0%
CAATCAACTCCTTAATCTCT+GGG + chr2_2:57798710-57798729 None:intergenic 35.0%
TCAATCAACTCCTTAATCTC+TGG + chr2_2:57798711-57798730 None:intergenic 35.0%
GATCTTATAATACCATCCCT+AGG + chr2_2:57798873-57798892 None:intergenic 35.0%
! ATTCTTTGGAAGTAAGCATG+AGG - chr2_2:57799296-57799315 Msa0260270:intron 35.0%
! GGCGTAAAGATGTTTTATGA+AGG - chr2_2:57799496-57799515 Msa0260270:intron 35.0%
ACAGATTCGTAAAGAAAGAC+AGG + chr2_2:57799842-57799861 None:intergenic 35.0%
CTTATCACCAGATTGTGAAA+AGG + chr2_2:57799872-57799891 None:intergenic 35.0%
ACTGGTTACCAAGATCAATT+TGG - chr2_2:57800058-57800077 Msa0260270:intron 35.0%
ATTATTGCCCTCAACTTTCA+CGG - chr2_2:57800137-57800156 Msa0260270:intron 35.0%
GTATACATTAAACAGCGACA+AGG + chr2_2:57800295-57800314 None:intergenic 35.0%
! CCCTTTTCATAAGATCTCTT+TGG - chr2_2:57800360-57800379 Msa0260270:intron 35.0%
!!! GAAATGAATGTTTTGGCACT+AGG - chr2_2:57800766-57800785 Msa0260270:intron 35.0%
!!! TCTGCACAAATTTTGGCTAA+AGG + chr2_2:57800836-57800855 None:intergenic 35.0%
CATGCATAAAATTCCTCCAT+GGG - chr2_2:57800974-57800993 Msa0260270:intron 35.0%
ATGCATAAAATTCCTCCATG+GGG - chr2_2:57800975-57800994 Msa0260270:intron 35.0%
TAAATAATATGGACGAGAGG+TGG + chr2_2:57801012-57801031 None:intergenic 35.0%
! AGTAAAGCACCCATTTGAAA+TGG + chr2_2:57801161-57801180 None:intergenic 35.0%
! CATTGCAACGTGATTTTGAA+AGG + chr2_2:57801370-57801389 None:intergenic 35.0%
!!! ATGCTTTGTTTGGTTTTGAC+TGG - chr2_2:57801387-57801406 Msa0260270:CDS 35.0%
!!! TCCTGTTAGGTTGTCATTTT+TGG - chr2_2:57801481-57801500 Msa0260270:intron 35.0%
ACCAAAAATGACAACCTAAC+AGG + chr2_2:57801485-57801504 None:intergenic 35.0%
! TTTTAGCACCTATCCACAAA+AGG - chr2_2:57801583-57801602 Msa0260270:CDS 35.0%
TTTAGCACCTATCCACAAAA+GGG - chr2_2:57801584-57801603 Msa0260270:CDS 35.0%
! TAAACTTGTAGTCCCTTTTG+TGG + chr2_2:57801599-57801618 None:intergenic 35.0%
! TTTCACCTAATGGATCAAAG+CGG + chr2_2:57801637-57801656 None:intergenic 35.0%
!!! TTGACTGCTTTTTCACCTAA+TGG + chr2_2:57801647-57801666 None:intergenic 35.0%
TGTCCCATGTTTGAATTCTA+AGG + chr2_2:57801678-57801697 None:intergenic 35.0%
AACACAAAAACATCAGTTGG+TGG + chr2_2:57801726-57801745 None:intergenic 35.0%
TGAAAAATGTGGAGACAATC+TGG - chr2_2:57801812-57801831 Msa0260270:five_prime_UTR 35.0%
! GGAAACTTTGGTTCCTTAAT+CGG - chr2_2:57801860-57801879 Msa0260270:five_prime_UTR 35.0%
! TTTGAGATCTACGGTGGTTA+CGG + chr2_2:57797201-57797220 None:intergenic 40.0%
AGATCTCAAACACCATCATG+TGG - chr2_2:57797211-57797230 Msa0260270:three_prime_UTR 40.0%
AGTGAAGATACCTGATTGTG+TGG + chr2_2:57797346-57797365 None:intergenic 40.0%
! GATTTGGTTGTGATTGTAGC+TGG - chr2_2:57797414-57797433 Msa0260270:three_prime_UTR 40.0%
GATGTAGTTCCAATTGCTAC+CGG - chr2_2:57797459-57797478 Msa0260270:three_prime_UTR 40.0%
GAAAACCACTATAGCGAGTT+AGG - chr2_2:57797820-57797839 Msa0260270:intron 40.0%
AGTATCCTAACTCGCTATAG+TGG + chr2_2:57797828-57797847 None:intergenic 40.0%
GTAGGCAATAGAAAATGGAG+AGG - chr2_2:57797961-57797980 Msa0260270:intron 40.0%
! AGCATATGGTGGAACAATAG+TGG - chr2_2:57798031-57798050 Msa0260270:intron 40.0%
! GTGGAACAATAGTGGTTTGT+TGG - chr2_2:57798039-57798058 Msa0260270:intron 40.0%
CTATAAGCGCTATACCTCTA+TGG + chr2_2:57798077-57798096 None:intergenic 40.0%
TTACTAACCTTCGTGCCAAA+AGG + chr2_2:57798220-57798239 None:intergenic 40.0%
ACCCACATCAAAATCAACCT+TGG + chr2_2:57798353-57798372 None:intergenic 40.0%
!! GTTGATTTTGATGTGGGTTG+CGG - chr2_2:57798355-57798374 Msa0260270:intron 40.0%
! GGCTTGGTTGTTGTTGTATA+CGG - chr2_2:57798799-57798818 Msa0260270:intron 40.0%
GTTATAACTCAGTGAAGGGT+AGG + chr2_2:57798840-57798859 None:intergenic 40.0%
! GGGTGTTATAACTCAGTGAA+GGG + chr2_2:57798844-57798863 None:intergenic 40.0%
! TGGGTGTTATAACTCAGTGA+AGG + chr2_2:57798845-57798864 None:intergenic 40.0%
TTATAACACCCAAGTCTCCT+AGG - chr2_2:57798853-57798872 Msa0260270:intron 40.0%
TATAACACCCAAGTCTCCTA+GGG - chr2_2:57798854-57798873 Msa0260270:intron 40.0%
TCGATACAGAAGCAATCTTC+TGG - chr2_2:57799178-57799197 Msa0260270:intron 40.0%
GGATGCTAAGTTGCTTACAT+TGG - chr2_2:57799271-57799290 Msa0260270:intron 40.0%
GGAAGTAAGCATGAGGATAT+TGG - chr2_2:57799303-57799322 Msa0260270:intron 40.0%
!! GAGGATAGCAACTTGTTAAC+AGG + chr2_2:57799341-57799360 None:intergenic 40.0%
CTCAATTACTTCACCGTACT+CGG - chr2_2:57799358-57799377 Msa0260270:intron 40.0%
TAACCATGGCTGGAAAATCA+AGG - chr2_2:57799530-57799549 Msa0260270:intron 40.0%
AACCATGGCTGGAAAATCAA+GGG - chr2_2:57799531-57799550 Msa0260270:intron 40.0%
TGTCTGCTTTCGCTGTTTAT+AGG - chr2_2:57799740-57799759 Msa0260270:intron 40.0%
TAGTAAGACTTAACAACGGC+AGG + chr2_2:57799771-57799790 None:intergenic 40.0%
! GTGCAAACCTTTTCACAATC+TGG - chr2_2:57799862-57799881 Msa0260270:intron 40.0%
!! AGCATGATGTTGTCTGGTTT+TGG - chr2_2:57799952-57799971 Msa0260270:intron 40.0%
TGAAAATACTGTGCACACAC+TGG + chr2_2:57800005-57800024 None:intergenic 40.0%
! AGTGTGTGCACAGTATTTTC+AGG - chr2_2:57800004-57800023 Msa0260270:intron 40.0%
ATGAAGTCCGTGAAAGTTGA+GGG + chr2_2:57800147-57800166 None:intergenic 40.0%
TATGAAGTCCGTGAAAGTTG+AGG + chr2_2:57800148-57800167 None:intergenic 40.0%
TCAACTTTCACGGACTTCAT+AGG - chr2_2:57800147-57800166 Msa0260270:intron 40.0%
ATTCCCGTAATTTGGCCAAA+AGG - chr2_2:57800561-57800580 Msa0260270:intron 40.0%
TTCCCGTAATTTGGCCAAAA+GGG - chr2_2:57800562-57800581 Msa0260270:intron 40.0%
GCATGCATAAAATTCCTCCA+TGG - chr2_2:57800973-57800992 Msa0260270:intron 40.0%
GCTATATATATTCCCCATGG+AGG + chr2_2:57800990-57801009 None:intergenic 40.0%
GTGGCTATATATATTCCCCA+TGG + chr2_2:57800993-57801012 None:intergenic 40.0%
TCTGATCAATGGTGTCCATA+AGG + chr2_2:57801292-57801311 None:intergenic 40.0%
AAACTGCAGCATCTGATCAA+TGG + chr2_2:57801303-57801322 None:intergenic 40.0%
!! GCAACGTGATTTTGAAAGGT+AGG + chr2_2:57801366-57801385 None:intergenic 40.0%
! TCACGTTGCAATGCTTTGTT+TGG - chr2_2:57801377-57801396 Msa0260270:intron 40.0%
GTGATTATTTAGACACAGGG+TGG - chr2_2:57801438-57801457 Msa0260270:CDS 40.0%
! TTGTAGTCCCTTTTGTGGAT+AGG + chr2_2:57801594-57801613 None:intergenic 40.0%
!! AAACATCAGTTGGTGGATGA+AGG + chr2_2:57801719-57801738 None:intergenic 40.0%
AGTCAAGTCACAACAGTAAC+TGG + chr2_2:57801761-57801780 None:intergenic 40.0%
TACTGTTGTGACTTGACTGT+TGG - chr2_2:57801763-57801782 Msa0260270:five_prime_UTR 40.0%
! TCAAACCCCCATTTGATGGT+GGG + chr2_2:57797002-57797021 None:intergenic 45.0%
ATCAAACCCCCATTTGATGG+TGG + chr2_2:57797003-57797022 None:intergenic 45.0%
CAAACGAATTAGCACGTGAC+GGG + chr2_2:57797046-57797065 None:intergenic 45.0%
CCAAACGAATTAGCACGTGA+CGG + chr2_2:57797047-57797066 None:intergenic 45.0%
CGTCACGTGCTAATTCGTTT+GGG - chr2_2:57797045-57797064 Msa0260270:three_prime_UTR 45.0%
! CGCGCTCAAGTTTAACTTCA+AGG + chr2_2:57797071-57797090 None:intergenic 45.0%
! ATGGTGTTTGAGATCTACGG+TGG + chr2_2:57797207-57797226 None:intergenic 45.0%
TCTCAAACACCATCATGTGG+CGG - chr2_2:57797214-57797233 Msa0260270:three_prime_UTR 45.0%
!!! GAAGTTAGGGTTTTGAGGTG+AGG + chr2_2:57797255-57797274 None:intergenic 45.0%
GGTTGTGATTGTAGCTGGTT+CGG - chr2_2:57797419-57797438 Msa0260270:three_prime_UTR 45.0%
TTCGGTGAAGAAGACAGTTG+AGG - chr2_2:57797437-57797456 Msa0260270:three_prime_UTR 45.0%
AATCTCCTCACGTTCATGAC+CGG + chr2_2:57797481-57797500 None:intergenic 45.0%
GGAGATTCAAGCTGATCTTG+AGG - chr2_2:57797494-57797513 Msa0260270:three_prime_UTR 45.0%
GTAGTTCGGATTCAAGGCAT+AGG + chr2_2:57797710-57797729 None:intergenic 45.0%
GGAATTCTGCTACACCATAG+AGG - chr2_2:57798060-57798079 Msa0260270:intron 45.0%
CTTCAGGGTGGTCTATTTCA+AGG + chr2_2:57798195-57798214 None:intergenic 45.0%
CTTGAAATAGACCACCCTGA+AGG - chr2_2:57798193-57798212 Msa0260270:intron 45.0%
!! TTTTGATGTGGGTTGCGGAA+TGG - chr2_2:57798360-57798379 Msa0260270:intron 45.0%
AACAGGGACTCATACCCTTT+AGG + chr2_2:57798494-57798513 None:intergenic 45.0%
! GGTTGGCTACATGGATCAAA+CGG + chr2_2:57798763-57798782 None:intergenic 45.0%
! AAGCCTTATCCCACTAAGCA+GGG + chr2_2:57798784-57798803 None:intergenic 45.0%
AAGGGTAGGTAGGAAGACTA+GGG + chr2_2:57798826-57798845 None:intergenic 45.0%
TAACTCAGTGAAGGGTAGGT+AGG + chr2_2:57798836-57798855 None:intergenic 45.0%
ATACCATCCCTAGGAGACTT+GGG + chr2_2:57798864-57798883 None:intergenic 45.0%
AATACCATCCCTAGGAGACT+TGG + chr2_2:57798865-57798884 None:intergenic 45.0%
TGCAAAGACATGTAGAAGGC+TGG - chr2_2:57799082-57799101 Msa0260270:CDS 45.0%
CGAGTACGGTGAAGTAATTG+AGG + chr2_2:57799360-57799379 None:intergenic 45.0%
TCACCTCTTACAACCGAGTA+CGG + chr2_2:57799374-57799393 None:intergenic 45.0%
TAAGAGGTGAAGAGTAACCG+TGG - chr2_2:57799384-57799403 Msa0260270:intron 45.0%
TAACCGTGGCTGGAAAATCA+AGG - chr2_2:57799398-57799417 Msa0260270:intron 45.0%
AACCGTGGCTGGAAAATCAA+GGG - chr2_2:57799399-57799418 Msa0260270:intron 45.0%
!! AGGTTGGTGAAGAGTAACCA+TGG - chr2_2:57799516-57799535 Msa0260270:intron 45.0%
ACCATGGCTGGAAAATCAAG+GGG - chr2_2:57799532-57799551 Msa0260270:intron 45.0%
AGGATGAGCATGATGTTGTC+TGG - chr2_2:57799946-57799965 Msa0260270:intron 45.0%
!!! TGATGTTGTCTGGTTTTGGC+TGG - chr2_2:57799956-57799975 Msa0260270:intron 45.0%
TGCACACACTGGACATTCAT+GGG + chr2_2:57799994-57800013 None:intergenic 45.0%
! GACCCTTTTGGCCAAATTAC+GGG + chr2_2:57800567-57800586 None:intergenic 45.0%
! GGACCCTTTTGGCCAAATTA+CGG + chr2_2:57800568-57800587 None:intergenic 45.0%
GCCAAAAGGGTCCTATAGTT+GGG - chr2_2:57800575-57800594 Msa0260270:intron 45.0%
CCAAAAGGGTCCTATAGTTG+GGG - chr2_2:57800576-57800595 Msa0260270:intron 45.0%
CTACATCGATCCCCAACTAT+AGG + chr2_2:57800589-57800608 None:intergenic 45.0%
GCATTCATGAGTGATGACAC+TGG + chr2_2:57800879-57800898 None:intergenic 45.0%
TTCTGCGTTACAGCTTGAAG+TGG - chr2_2:57801249-57801268 Msa0260270:intron 45.0%
! AGATGCTGCAGTTTTCCTTC+AGG - chr2_2:57801309-57801328 Msa0260270:intron 45.0%
!! TTTGACTGGTCTAGACCTTG+CGG - chr2_2:57801401-57801420 Msa0260270:CDS 45.0%
TAGGTGCTAAAAGTAGCTGC+AGG + chr2_2:57801575-57801594 None:intergenic 45.0%
CAAGTCACAACAGTAACTGG+TGG + chr2_2:57801758-57801777 None:intergenic 45.0%
GTTGTGACTTGACTGTTGGT+TGG - chr2_2:57801767-57801786 Msa0260270:five_prime_UTR 45.0%
GGGCACTCAAAATCCGATTA+AGG + chr2_2:57801876-57801895 None:intergenic 45.0%
!! TGTATTAAATATATTAAATT+TGG - chr2_2:57799250-57799269 Msa0260270:intron 5.0%
!! CAAACCCCCATTTGATGGTG+GGG + chr2_2:57797001-57797020 None:intergenic 50.0%
CCGTCACGTGCTAATTCGTT+TGG - chr2_2:57797044-57797063 Msa0260270:three_prime_UTR 50.0%
GGAAGAACGAAGCAGAGTTG+AGG + chr2_2:57797153-57797172 None:intergenic 50.0%
CGGCGTCGTTTGATTGGAAA+TGG + chr2_2:57797181-57797200 None:intergenic 50.0%
TGGTTACGGCGTCGTTTGAT+TGG + chr2_2:57797187-57797206 None:intergenic 50.0%
AACGATTCTCCGCCACATGA+TGG + chr2_2:57797226-57797245 None:intergenic 50.0%
CGTTCATGACCGGTAGCAAT+TGG + chr2_2:57797471-57797490 None:intergenic 50.0%
TCGTGCCAAAAGGACCTTCA+GGG + chr2_2:57798210-57798229 None:intergenic 50.0%
TTCGTGCCAAAAGGACCTTC+AGG + chr2_2:57798211-57798230 None:intergenic 50.0%
! TGAAGGTCCTTTTGGCACGA+AGG - chr2_2:57798210-57798229 Msa0260270:intron 50.0%
!! TGTGGGTTGCGGAATGGTTT+TGG - chr2_2:57798366-57798385 Msa0260270:intron 50.0%
!! ACTAAGCAGGGTTGGCTACA+TGG + chr2_2:57798772-57798791 None:intergenic 50.0%
ATGTAGCCAACCCTGCTTAG+TGG - chr2_2:57798771-57798790 Msa0260270:intron 50.0%
TGTAGCCAACCCTGCTTAGT+GGG - chr2_2:57798772-57798791 Msa0260270:intron 50.0%
CTTATCCCACTAAGCAGGGT+TGG + chr2_2:57798780-57798799 None:intergenic 50.0%
CAACCCTGCTTAGTGGGATA+AGG - chr2_2:57798778-57798797 Msa0260270:intron 50.0%
! CAAGCCTTATCCCACTAAGC+AGG + chr2_2:57798785-57798804 None:intergenic 50.0%
CTGCTTAGTGGGATAAGGCT+TGG - chr2_2:57798783-57798802 Msa0260270:intron 50.0%
GAAGGGTAGGTAGGAAGACT+AGG + chr2_2:57798827-57798846 None:intergenic 50.0%
TCACCGTACTCGGTTGTAAG+AGG - chr2_2:57799368-57799387 Msa0260270:intron 50.0%
ACCGTGGCTGGAAAATCAAG+GGG - chr2_2:57799400-57799419 Msa0260270:intron 50.0%
! ACCCCTTGATTTTCCAGCCA+CGG + chr2_2:57799404-57799423 None:intergenic 50.0%
TGGTGAAGAGTAACCATGGC+TGG - chr2_2:57799520-57799539 Msa0260270:intron 50.0%
! ACCCCTTGATTTTCCAGCCA+TGG + chr2_2:57799404-57799423 None:intergenic 50.0%
AGAAGGATTGTTGGATGCCC+CGG - chr2_2:57799795-57799814 Msa0260270:intron 50.0%
!!! TGTTGTCTGGTTTTGGCTGG+AGG - chr2_2:57799959-57799978 Msa0260270:intron 50.0%
GCACACACTGGACATTCATG+GGG + chr2_2:57799993-57800012 None:intergenic 50.0%
GTGCACACACTGGACATTCA+TGG + chr2_2:57799995-57800014 None:intergenic 50.0%
GGCCAAAAGGGTCCTATAGT+TGG - chr2_2:57800574-57800593 Msa0260270:intron 50.0%
! CCCCAACTATAGGACCCTTT+TGG + chr2_2:57800579-57800598 None:intergenic 50.0%
TGTCAGCATACACTACACCG+TGG + chr2_2:57800945-57800964 None:intergenic 50.0%
TGCGTTACAGCTTGAAGTGG+TGG - chr2_2:57801252-57801271 Msa0260270:intron 50.0%
GCGTTACAGCTTGAAGTGGT+GGG - chr2_2:57801253-57801272 Msa0260270:intron 50.0%
CAGAAACTCTCTGAACCGCA+AGG + chr2_2:57801419-57801438 None:intergenic 50.0%
AGCCTCCGCTTTGATCCATT+AGG - chr2_2:57801629-57801648 Msa0260270:CDS 50.0%
! CACCTAATGGATCAAAGCGG+AGG + chr2_2:57801634-57801653 None:intergenic 50.0%
GGACATGTTAATCCCTCCGT+CGG - chr2_2:57801693-57801712 Msa0260270:five_prime_UTR 50.0%
TACCTGATTGTGTGGCGACG+TGG + chr2_2:57797338-57797357 None:intergenic 55.0%
TGCTACCGGTCATGAACGTG+AGG - chr2_2:57797473-57797492 Msa0260270:three_prime_UTR 55.0%
! GACCACCCTGAAGGTCCTTT+TGG - chr2_2:57798202-57798221 Msa0260270:intron 55.0%
TGCCAAAAGGACCTTCAGGG+TGG + chr2_2:57798207-57798226 None:intergenic 55.0%
ACACCCAAGTCTCCTAGGGA+TGG - chr2_2:57798858-57798877 Msa0260270:intron 55.0%
AGGTGAAGAGTAACCGTGGC+TGG - chr2_2:57799388-57799407 Msa0260270:intron 55.0%
ACACTTACCACCCTCACCAC+CGG + chr2_2:57799817-57799836 None:intergenic 55.0%
!!! GTCTGGTTTTGGCTGGAGGA+AGG - chr2_2:57799963-57799982 Msa0260270:intron 55.0%
TGTCCATAAGGATCACCGCC+AGG + chr2_2:57801280-57801299 None:intergenic 55.0%
!! AGTTGGTGGATGAAGGCCGA+CGG + chr2_2:57801712-57801731 None:intergenic 55.0%
CTGATTGTGTGGCGACGTGG+CGG + chr2_2:57797335-57797354 None:intergenic 60.0%
AGGATTGTTGGATGCCCCGG+TGG - chr2_2:57799798-57799817 Msa0260270:intron 60.0%
ACTTACCACCCTCACCACCG+GGG + chr2_2:57799815-57799834 None:intergenic 60.0%
CACTTACCACCCTCACCACC+GGG + chr2_2:57799816-57799835 None:intergenic 60.0%
! CAGCTTGAAGTGGTGGGACC+TGG - chr2_2:57801259-57801278 Msa0260270:intron 60.0%
! CTTGAAGTGGTGGGACCTGG+CGG - chr2_2:57801262-57801281 Msa0260270:intron 60.0%
GGACCTGGCGGTGATCCTTA+TGG - chr2_2:57801274-57801293 Msa0260270:intron 60.0%
CGCCACGTCGCCACACAATC+AGG - chr2_2:57797333-57797352 Msa0260270:three_prime_UTR 65.0%
TGTTGGATGCCCCGGTGGTG+AGG - chr2_2:57799803-57799822 Msa0260270:intron 65.0%
GTTGGATGCCCCGGTGGTGA+GGG - chr2_2:57799804-57799823 Msa0260270:intron 65.0%
GGTGGATGAAGGCCGACGGA+GGG + chr2_2:57801708-57801727 None:intergenic 65.0%
! TGGTGGATGAAGGCCGACGG+AGG + chr2_2:57801709-57801728 None:intergenic 65.0%
CATCCTCGATCCGCCGTCGC+CGG - chr2_2:57797288-57797307 Msa0260270:three_prime_UTR 70.0%
GAATCGGAGACCGGCGACGG+CGG + chr2_2:57797301-57797320 None:intergenic 70.0%
GGCGAATCGGAGACCGGCGA+CGG + chr2_2:57797304-57797323 None:intergenic 70.0%
! GTCGCCGGTCTCCGATTCGC+CGG - chr2_2:57797303-57797322 Msa0260270:three_prime_UTR 70.0%
GAGGCCGGCGAATCGGAGAC+CGG + chr2_2:57797310-57797329 None:intergenic 70.0%
AGACCGGCGACGGCGGATCG+AGG + chr2_2:57797294-57797313 None:intergenic 75.0%
GGCGGCTGAGGCCGGCGAAT+CGG + chr2_2:57797317-57797336 None:intergenic 75.0%
GTGTGGCGACGTGGCGGCTG+AGG + chr2_2:57797329-57797348 None:intergenic 75.0%
GGATGCCCCGGTGGTGAGGG+TGG - chr2_2:57799807-57799826 Msa0260270:intron 75.0%
! GGCGACGTGGCGGCTGAGGC+CGG + chr2_2:57797325-57797344 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 57796996 57801898 57796996 ID=Msa0260270;Name=Msa0260270
chr2_2 mRNA 57796996 57801898 57796996 ID=Msa0260270-mRNA-1;Parent=Msa0260270;Name=Msa0260270-mRNA-1;_AED=0.07;_eAED=0.07;_QI=232|1|1|1|1|1|6|592|150
chr2_2 exon 57796996 57797632 57796996 ID=Msa0260270-mRNA-1:exon:17636;Parent=Msa0260270-mRNA-1
chr2_2 exon 57798869 57798948 57798869 ID=Msa0260270-mRNA-1:exon:17635;Parent=Msa0260270-mRNA-1
chr2_2 exon 57799066 57799132 57799066 ID=Msa0260270-mRNA-1:exon:17634;Parent=Msa0260270-mRNA-1
chr2_2 exon 57800663 57800713 57800663 ID=Msa0260270-mRNA-1:exon:17633;Parent=Msa0260270-mRNA-1
chr2_2 exon 57801379 57801461 57801379 ID=Msa0260270-mRNA-1:exon:17632;Parent=Msa0260270-mRNA-1
chr2_2 exon 57801540 57801898 57801540 ID=Msa0260270-mRNA-1:exon:17631;Parent=Msa0260270-mRNA-1
chr2_2 five_prime_UTR 57801667 57801898 57801667 ID=Msa0260270-mRNA-1:five_prime_utr;Parent=Msa0260270-mRNA-1
chr2_2 CDS 57801540 57801666 57801540 ID=Msa0260270-mRNA-1:cds;Parent=Msa0260270-mRNA-1
chr2_2 CDS 57801379 57801461 57801379 ID=Msa0260270-mRNA-1:cds;Parent=Msa0260270-mRNA-1
chr2_2 CDS 57800663 57800713 57800663 ID=Msa0260270-mRNA-1:cds;Parent=Msa0260270-mRNA-1
chr2_2 CDS 57799066 57799132 57799066 ID=Msa0260270-mRNA-1:cds;Parent=Msa0260270-mRNA-1
chr2_2 CDS 57798869 57798948 57798869 ID=Msa0260270-mRNA-1:cds;Parent=Msa0260270-mRNA-1
chr2_2 CDS 57797588 57797632 57797588 ID=Msa0260270-mRNA-1:cds;Parent=Msa0260270-mRNA-1
chr2_2 three_prime_UTR 57796996 57797587 57796996 ID=Msa0260270-mRNA-1:three_prime_utr;Parent=Msa0260270-mRNA-1
Gene Sequence

>Msa0260270

ATGTGGCGGAGAATCGTTTCTTCTCCTCACCTCAAAACCCTAACTTCTTCATCTCATTCTCATCCTCGATCCGCCGTCGCCGGTCTCCGATTCGCCGGCCTCAGCCGCCACGTCGCCACACAATCAGCTGGTTCGGTGAAGAAGACAGTTGAGGATGTAGTTCCAATTGCTACCGGTCATGAACGTGAGGAGATTCAAGCTGATCTTGAGGGAAGGAATATCCTTGAAATAGACCACCCTGAAGGTCCTTTTGGCACGAAGGAAGCACCTGCCGTTGTTAAGTCTTACTATAACAGAAGGATTGTTGGATGCCCCGGTGGTGAGGGTGAGGATGAGCATGATGTTGTCTGGTTTTGGCTGGAGGAAGGCAAGCCCCATGAATGTCCAGTGTGTGCACAGTATTTTCAGCTTGAAGTGGTGGGACCTGGCGGTGATCCTTATGGACACCATTGA
Protein sequence

>Msa0260270

MWRRIVSSPHLKTLTSSSHSHPRSAVAGLRFAGLSRHVATQSAGSVKKTVEDVVPIATGHEREEIQADLEGRNILEIDHPEGPFGTKEAPAVVKSYYNRRIVGCPGGEGEDEHDVVWFWLEEGKPHECPVCAQYFQLEVVGPGGDPYGHH*