Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0813930 | XP_003615883.1 | 98.602 | 644 | 9 | 0 | 1 | 644 | 1 | 644 | 0.0 | 1321 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0813930 | sp|Q9FGH9|E70B1_ARATH | 69.436 | 638 | 174 | 7 | 1 | 635 | 1 | 620 | 0.0 | 891 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0813930 | G7JZR5 | 98.602 | 644 | 9 | 0 | 1 | 644 | 1 | 644 | 0.0 | 1321 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0659990 | Msa0813930 | 0.800536 | 1.376420e-48 | -8.615850e-47 |
| Msa0687230 | Msa0813930 | 0.823096 | 1.665137e-53 | -8.615850e-47 |
| Msa0699810 | Msa0813930 | 0.804661 | 1.940981e-49 | -8.615850e-47 |
| Msa0813930 | Msa1036740 | 0.812856 | 3.434369e-51 | -8.615850e-47 |
| Msa0813930 | Msa1296300 | 0.802262 | 6.098685e-49 | -8.615850e-47 |
| Msa0813930 | Msa1420660 | 0.824732 | 6.883597e-54 | -8.615850e-47 |
| Msa0813930 | Msa1438450 | 0.804908 | 1.723695e-49 | -8.615850e-47 |
| Msa0193600 | Msa0813930 | 0.811895 | 5.568435e-51 | -8.615850e-47 |
| Msa0273650 | Msa0813930 | 0.808889 | 2.481075e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0813930 | MtrunA17_Chr5g0431731 | 98.602 | 644 | 9 | 0 | 1 | 644 | 1 | 644 | 0.0 | 1321 |
| Msa0813930 | MtrunA17_Chr3g0106431 | 69.612 | 645 | 176 | 5 | 1 | 642 | 1 | 628 | 0.0 | 870 |
| Msa0813930 | MtrunA17_Chr5g0431741 | 64.350 | 446 | 157 | 2 | 194 | 637 | 251 | 696 | 0.0 | 588 |
| Msa0813930 | MtrunA17_Chr5g0432091 | 50.873 | 458 | 209 | 5 | 199 | 643 | 259 | 713 | 8.00e-143 | 432 |
| Msa0813930 | MtrunA17_Chr5g0431761 | 58.005 | 381 | 108 | 4 | 194 | 571 | 252 | 583 | 9.10e-143 | 427 |
| Msa0813930 | MtrunA17_Chr5g0431811 | 62.575 | 334 | 105 | 2 | 194 | 525 | 280 | 595 | 1.05e-131 | 413 |
| Msa0813930 | MtrunA17_Chr5g0431811 | 38.760 | 258 | 136 | 4 | 378 | 634 | 833 | 1069 | 6.32e-41 | 160 |
| Msa0813930 | MtrunA17_Chr8g0344461 | 41.667 | 456 | 254 | 5 | 201 | 644 | 161 | 616 | 1.19e-123 | 379 |
| Msa0813930 | MtrunA17_Chr4g0057561 | 34.143 | 659 | 394 | 10 | 6 | 634 | 33 | 681 | 2.54e-117 | 365 |
| Msa0813930 | MtrunA17_Chr7g0219041 | 33.832 | 668 | 387 | 14 | 6 | 634 | 16 | 667 | 8.40e-114 | 356 |
| Msa0813930 | MtrunA17_Chr6g0462011 | 36.563 | 547 | 310 | 10 | 114 | 644 | 212 | 737 | 5.07e-113 | 355 |
| Msa0813930 | MtrunA17_Chr7g0224041 | 37.803 | 537 | 309 | 10 | 119 | 643 | 137 | 660 | 4.75e-111 | 348 |
| Msa0813930 | MtrunA17_Chr5g0432041 | 44.643 | 448 | 226 | 9 | 190 | 631 | 242 | 673 | 9.40e-109 | 343 |
| Msa0813930 | MtrunA17_Chr1g0177671 | 32.488 | 631 | 396 | 9 | 22 | 641 | 22 | 633 | 1.66e-107 | 338 |
| Msa0813930 | MtrunA17_Chr1g0197101 | 31.231 | 650 | 394 | 12 | 22 | 641 | 23 | 649 | 1.29e-105 | 333 |
| Msa0813930 | MtrunA17_Chr1g0214001 | 33.612 | 598 | 335 | 12 | 91 | 642 | 96 | 677 | 2.65e-96 | 310 |
| Msa0813930 | MtrunA17_Chr3g0086881 | 29.938 | 648 | 397 | 14 | 7 | 637 | 5 | 612 | 4.97e-89 | 289 |
| Msa0813930 | MtrunA17_Chr3g0104851 | 39.732 | 448 | 242 | 11 | 196 | 635 | 243 | 670 | 8.30e-84 | 277 |
| Msa0813930 | MtrunA17_Chr2g0327741 | 28.933 | 553 | 355 | 9 | 94 | 640 | 68 | 588 | 2.17e-82 | 271 |
| Msa0813930 | MtrunA17_Chr4g0030621 | 30.853 | 551 | 348 | 11 | 94 | 631 | 72 | 602 | 1.04e-79 | 265 |
| Msa0813930 | MtrunA17_Chr5g0431871 | 66.111 | 180 | 59 | 1 | 201 | 378 | 1 | 180 | 1.94e-74 | 237 |
| Msa0813930 | MtrunA17_Chr1g0182041 | 30.250 | 519 | 332 | 11 | 125 | 631 | 100 | 600 | 1.46e-72 | 245 |
| Msa0813930 | MtrunA17_Chr1g0182031 | 28.378 | 518 | 344 | 9 | 125 | 631 | 98 | 599 | 1.72e-66 | 229 |
| Msa0813930 | MtrunA17_Chr5g0431971 | 40.823 | 316 | 168 | 5 | 321 | 634 | 28 | 326 | 2.44e-66 | 221 |
| Msa0813930 | MtrunA17_Chr5g0444661 | 45.421 | 273 | 134 | 5 | 297 | 565 | 162 | 423 | 4.59e-59 | 204 |
| Msa0813930 | MtrunA17_Chr5g0431991 | 49.758 | 207 | 76 | 6 | 177 | 378 | 233 | 416 | 4.19e-45 | 166 |
| Msa0813930 | MtrunA17_Chr5g0431881 | 39.669 | 242 | 124 | 4 | 394 | 634 | 4 | 224 | 4.73e-44 | 157 |
| Msa0813930 | MtrunA17_Chr1g0147911 | 26.296 | 521 | 333 | 10 | 131 | 642 | 184 | 662 | 1.39e-38 | 152 |
| Msa0813930 | MtrunA17_Chr5g0431891 | 38.384 | 198 | 80 | 3 | 200 | 396 | 127 | 283 | 5.62e-30 | 119 |
| Msa0813930 | MtrunA17_Chr1g0152401 | 25.901 | 444 | 270 | 12 | 197 | 602 | 242 | 664 | 1.43e-29 | 124 |
| Msa0813930 | MtrunA17_Chr5g0431821 | 38.776 | 196 | 78 | 3 | 202 | 396 | 275 | 429 | 3.99e-29 | 120 |
| Msa0813930 | MtrunA17_Chr4g0002391 | 25.113 | 442 | 296 | 12 | 205 | 632 | 220 | 640 | 6.03e-27 | 116 |
| Msa0813930 | MtrunA17_Chr2g0300651 | 23.282 | 451 | 293 | 10 | 205 | 632 | 218 | 638 | 4.32e-23 | 104 |
| Msa0813930 | MtrunA17_Chr5g0431981 | 38.971 | 136 | 72 | 3 | 196 | 326 | 242 | 371 | 1.03e-22 | 100 |
| Msa0813930 | MtrunA17_Chr5g0432061 | 38.806 | 134 | 68 | 4 | 340 | 470 | 1 | 123 | 1.75e-14 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0813930 | AT5G58430.1 | 69.436 | 638 | 174 | 7 | 1 | 635 | 1 | 620 | 0.0 | 891 |
| Msa0813930 | AT1G07000.1 | 50.078 | 645 | 265 | 10 | 1 | 635 | 1 | 598 | 0.0 | 635 |
| Msa0813930 | AT5G50380.1 | 35.045 | 662 | 383 | 12 | 7 | 634 | 24 | 672 | 9.07e-121 | 374 |
| Msa0813930 | AT5G13990.1 | 38.330 | 587 | 328 | 14 | 74 | 643 | 124 | 693 | 8.67e-120 | 372 |
| Msa0813930 | AT3G14090.1 | 36.096 | 543 | 318 | 7 | 126 | 643 | 85 | 623 | 1.95e-117 | 364 |
| Msa0813930 | AT1G72470.1 | 41.394 | 459 | 250 | 7 | 201 | 644 | 178 | 632 | 3.71e-117 | 363 |
| Msa0813930 | AT5G13150.1 | 36.752 | 585 | 308 | 13 | 91 | 643 | 99 | 653 | 2.21e-113 | 354 |
| Msa0813930 | AT1G54090.1 | 39.514 | 453 | 261 | 6 | 201 | 642 | 170 | 620 | 1.18e-111 | 349 |
| Msa0813930 | AT5G03540.1 | 33.071 | 635 | 380 | 10 | 22 | 635 | 22 | 632 | 3.93e-109 | 343 |
| Msa0813930 | AT5G03540.3 | 32.675 | 658 | 390 | 11 | 22 | 641 | 22 | 664 | 1.43e-107 | 339 |
| Msa0813930 | AT5G03540.2 | 39.456 | 441 | 248 | 4 | 204 | 635 | 87 | 517 | 1.42e-106 | 332 |
| Msa0813930 | AT5G52340.1 | 30.781 | 627 | 410 | 6 | 22 | 641 | 22 | 631 | 5.30e-105 | 332 |
| Msa0813930 | AT3G29400.1 | 32.191 | 671 | 404 | 16 | 4 | 643 | 7 | 657 | 4.80e-94 | 304 |
| Msa0813930 | AT5G52350.1 | 33.404 | 470 | 298 | 4 | 176 | 642 | 129 | 586 | 1.30e-85 | 280 |
| Msa0813930 | AT2G39380.1 | 28.261 | 552 | 369 | 7 | 94 | 634 | 76 | 611 | 2.46e-77 | 259 |
| Msa0813930 | AT5G59730.2 | 28.383 | 606 | 372 | 11 | 63 | 634 | 22 | 599 | 4.90e-75 | 253 |
| Msa0813930 | AT5G59730.1 | 28.383 | 606 | 372 | 11 | 63 | 634 | 22 | 599 | 6.55e-75 | 253 |
| Msa0813930 | AT5G61010.1 | 27.591 | 656 | 409 | 16 | 15 | 643 | 23 | 639 | 7.54e-74 | 250 |
| Msa0813930 | AT5G61010.2 | 27.591 | 656 | 409 | 16 | 15 | 643 | 23 | 639 | 7.54e-74 | 250 |
| Msa0813930 | AT1G07725.1 | 27.799 | 536 | 320 | 9 | 125 | 633 | 96 | 591 | 6.21e-72 | 244 |
| Msa0813930 | AT3G55150.1 | 28.364 | 550 | 371 | 8 | 94 | 634 | 76 | 611 | 2.34e-71 | 243 |
| Msa0813930 | AT3G09530.1 | 27.831 | 521 | 350 | 5 | 125 | 633 | 96 | 602 | 1.16e-69 | 238 |
| Msa0813930 | AT2G28640.1 | 28.489 | 523 | 330 | 8 | 125 | 637 | 94 | 582 | 6.40e-68 | 233 |
| Msa0813930 | AT3G09520.1 | 27.986 | 561 | 364 | 10 | 89 | 632 | 68 | 605 | 4.82e-66 | 228 |
| Msa0813930 | AT2G28650.1 | 28.741 | 421 | 281 | 5 | 212 | 631 | 152 | 554 | 4.45e-53 | 192 |
| Msa0813930 | AT4G31540.1 | 25.775 | 516 | 335 | 9 | 135 | 642 | 190 | 665 | 3.56e-39 | 154 |
| Msa0813930 | AT1G51640.1 | 24.270 | 445 | 302 | 10 | 209 | 632 | 196 | 626 | 6.31e-25 | 110 |
Find 135 sgRNAs with CRISPR-Local
Find 308 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCAGGGTCCTTATAGATTT+TGG | 0.108866 | 5_3:-45397177 | None:intergenic |
| TTTCATCAGATCATCCAATT+TGG | 0.182888 | 5_3:+45396013 | Msa0813930:CDS |
| CAGCCATATTGTTATTATTA+TGG | 0.186970 | 5_3:-45395831 | None:intergenic |
| CGAATGGTTGCCGGTGGATT+TGG | 0.193761 | 5_3:+45396420 | Msa0813930:CDS |
| TCCGGCTAAGGCGGGTGTTC+CGG | 0.217088 | 5_3:+45396944 | Msa0813930:CDS |
| CCTTATTCCATGAGCTTCTT+TGG | 0.233529 | 5_3:-45397334 | None:intergenic |
| GAAATTGAAAGATGGATTAA+AGG | 0.249788 | 5_3:+45396570 | Msa0813930:CDS |
| AAAACTCAATGATTTGTTTC+AGG | 0.259634 | 5_3:+45397643 | Msa0813930:CDS |
| TCCAAGAGCTTTCACGGCTT+TGG | 0.277854 | 5_3:+45395948 | Msa0813930:CDS |
| AGAGCGGTTGTTTAAAATTC+TGG | 0.290101 | 5_3:+45396761 | Msa0813930:CDS |
| AGGAGAGTTTATCGAGATTA+GGG | 0.303056 | 5_3:+45396490 | Msa0813930:CDS |
| AAAGCCGAAGATAGTGAATT+AGG | 0.312797 | 5_3:+45397245 | Msa0813930:CDS |
| AATGGATCAATGCAACATAA+TGG | 0.314221 | 5_3:+45397383 | Msa0813930:CDS |
| TAAGGTGTTTGGGTTTCTTA+AGG | 0.322354 | 5_3:+45397352 | Msa0813930:CDS |
| TTTCTTAAGGTGGAGAATAA+TGG | 0.326928 | 5_3:+45397365 | Msa0813930:CDS |
| AACATTGCGTGACCTAATTT+CGG | 0.332839 | 5_3:+45396794 | Msa0813930:CDS |
| GCTGATAAATATATTAAGTA+TGG | 0.333613 | 5_3:+45397602 | Msa0813930:CDS |
| ACAACTCAAACTCCGAAATT+AGG | 0.336754 | 5_3:-45396806 | None:intergenic |
| AGCAAAATCCAAAATCTATA+AGG | 0.337586 | 5_3:+45397169 | Msa0813930:CDS |
| ATGGATCAATGCAACATAAT+GGG | 0.338830 | 5_3:+45397384 | Msa0813930:CDS |
| TACAGATTTAGCTTCGCTTT+CGG | 0.343027 | 5_3:-45397688 | None:intergenic |
| TATCTTTGATGAACAACTTA+AGG | 0.343532 | 5_3:+45397487 | Msa0813930:CDS |
| CCAAAGAAGCTCATGGAATA+AGG | 0.348350 | 5_3:+45397334 | Msa0813930:CDS |
| AGCTCATGGAATAAGGTGTT+TGG | 0.350167 | 5_3:+45397341 | Msa0813930:CDS |
| GAGCAAGTCTTTGAAGACTA+TGG | 0.352862 | 5_3:+45397041 | Msa0813930:CDS |
| TCAGCAGAGTCTGCCCAAAT+TGG | 0.354285 | 5_3:-45396027 | None:intergenic |
| TTCATCACGTAACGCGTAAT+CGG | 0.355133 | 5_3:-45396981 | None:intergenic |
| AGCTTCTTTGGTACTGCATA+TGG | 0.365030 | 5_3:-45397322 | None:intergenic |
| GGAGCTATTAGAGAGCAATT+TGG | 0.368249 | 5_3:+45397145 | Msa0813930:CDS |
| TGCTCCTAATTCACTATCTT+CGG | 0.368543 | 5_3:-45397249 | None:intergenic |
| GAATGGTTGCCGGTGGATTT+GGG | 0.370483 | 5_3:+45396421 | Msa0813930:CDS |
| TTCGTCTTTGTCGGTGCAAA+TGG | 0.370914 | 5_3:+45397112 | Msa0813930:CDS |
| AAGGCGGGTGTTCCGGGTGG+TGG | 0.371274 | 5_3:+45396951 | Msa0813930:CDS |
| GAGGAGAGTTTATCGAGATT+AGG | 0.373650 | 5_3:+45396489 | Msa0813930:CDS |
| CGCATGTTTACAGTAGTTGC+CGG | 0.374386 | 5_3:+45396454 | Msa0813930:CDS |
| AGGCCATAATAATAACAATA+TGG | 0.381566 | 5_3:+45395828 | Msa0813930:CDS |
| CAGAGATCCAAGAGCTTTCA+CGG | 0.387583 | 5_3:+45395942 | Msa0813930:CDS |
| TTCATCAGATCATCCAATTT+GGG | 0.387842 | 5_3:+45396014 | Msa0813930:CDS |
| TAGTTGCCGGAGAGAATTCT+TGG | 0.391094 | 5_3:+45396467 | Msa0813930:CDS |
| GGTGCAAATGGATTGGATTA+TGG | 0.395788 | 5_3:+45397124 | Msa0813930:CDS |
| GCTCATGGAATAAGGTGTTT+GGG | 0.397422 | 5_3:+45397342 | Msa0813930:CDS |
| TGCATCCTATCATCCATCTT+AGG | 0.400142 | 5_3:-45397083 | None:intergenic |
| GCATTCATCTTCGTCTTTGT+CGG | 0.400996 | 5_3:+45397103 | Msa0813930:CDS |
| ATTACTATATGGAAGAGATT+GGG | 0.401127 | 5_3:+45396870 | Msa0813930:CDS |
| CTTTGTCGGTGCAAATGGAT+TGG | 0.403105 | 5_3:+45397117 | Msa0813930:CDS |
| ACAATTTCATAATCCGTTAC+CGG | 0.411801 | 5_3:-45396345 | None:intergenic |
| TTAGCTTCGCTTTCGGCTAC+CGG | 0.424223 | 5_3:-45397681 | None:intergenic |
| GGAATGAAGCAATTACTATA+TGG | 0.424616 | 5_3:+45396859 | Msa0813930:CDS |
| AAACTCAATGATTTGTTTCA+GGG | 0.430768 | 5_3:+45397644 | Msa0813930:CDS |
| AATTACTATATGGAAGAGAT+TGG | 0.434289 | 5_3:+45396869 | Msa0813930:CDS |
| ATCGCGAAACGAATGGTTGC+CGG | 0.437422 | 5_3:+45396411 | Msa0813930:CDS |
| TCCAAAGCCGTGAAAGCTCT+TGG | 0.438932 | 5_3:-45395949 | None:intergenic |
| GAATTTGATTCGAAGGGATC+CGG | 0.454380 | 5_3:+45396926 | Msa0813930:CDS |
| ATTATCCTAAGATGGATGAT+AGG | 0.458844 | 5_3:+45397078 | Msa0813930:CDS |
| AGGTGAAGAGGATCTGATTC+CGG | 0.459732 | 5_3:+45396314 | Msa0813930:CDS |
| CCCGGAACACCCGCCTTAGC+CGG | 0.464875 | 5_3:-45396945 | None:intergenic |
| TCTGATTCCGGTTGCGATGC+CGG | 0.465064 | 5_3:+45396326 | Msa0813930:CDS |
| TTCGCAGATGCTGTTGCGAT+TGG | 0.470257 | 5_3:+45396726 | Msa0813930:CDS |
| GATTCGAAGGGATCCGGCTA+AGG | 0.472839 | 5_3:+45396932 | Msa0813930:CDS |
| CAGGGAAGCAGCGGATCAAC+CGG | 0.475342 | 5_3:+45397662 | Msa0813930:CDS |
| GGATGAGTTTCGTTCTCTCA+TGG | 0.480828 | 5_3:+45396188 | Msa0813930:CDS |
| CAAATCTTCTCAAATTTCGA+TGG | 0.480862 | 5_3:+45395865 | Msa0813930:CDS |
| AAGAAAACGTAGCACAAAGC+AGG | 0.482301 | 5_3:-45397194 | None:intergenic |
| TTTCAAAATGCTGCTGAAGT+TGG | 0.489782 | 5_3:+45397572 | Msa0813930:CDS |
| GGTGTTTGGGTTTCTTAAGG+TGG | 0.489955 | 5_3:+45397355 | Msa0813930:CDS |
| TTGAAGATGAAATTGAAAGA+TGG | 0.490489 | 5_3:+45396562 | Msa0813930:CDS |
| ATTGAAGGATTATCCTAAGA+TGG | 0.495216 | 5_3:+45397070 | Msa0813930:CDS |
| GCAATGAAATTTGCATAAGC+TGG | 0.497252 | 5_3:-45397545 | None:intergenic |
| ACCGTTTGATTCTGAAGAAG+AGG | 0.499752 | 5_3:+45396272 | Msa0813930:CDS |
| GCCGTACCGGAACAGCGATT+CGG | 0.500658 | 5_3:+45396242 | Msa0813930:CDS |
| TCCGGTTGCGATGCCGGTAA+CGG | 0.500704 | 5_3:+45396332 | Msa0813930:CDS |
| ATCTTAGGATAATCCTTCAA+TGG | 0.501748 | 5_3:-45397068 | None:intergenic |
| ATCAGTATAGTGTGTCTTTG+AGG | 0.503425 | 5_3:+45396838 | Msa0813930:CDS |
| TCCTCTTCTTCAGAATCAAA+CGG | 0.503787 | 5_3:-45396273 | None:intergenic |
| GTGTAGGTCGCGGCAGACTT+TGG | 0.505804 | 5_3:+45397019 | Msa0813930:CDS |
| TTGACTTAACGCCGCCGTAC+CGG | 0.507619 | 5_3:+45396229 | Msa0813930:CDS |
| AGTTGGAGAATTTGATTCGA+AGG | 0.519933 | 5_3:+45396919 | Msa0813930:CDS |
| TAAACAACCGCTCTGGCGAC+CGG | 0.521805 | 5_3:-45396752 | None:intergenic |
| ACCGAATCGCTGTTCCGGTA+CGG | 0.526372 | 5_3:-45396243 | None:intergenic |
| TGAGAAAGTCGCTGCGGTCG+AGG | 0.527276 | 5_3:+45395912 | Msa0813930:CDS |
| CGAAGGGATCCGGCTAAGGC+GGG | 0.530606 | 5_3:+45396936 | Msa0813930:CDS |
| ATTACCTTCGTGCTGCGTGT+AGG | 0.531020 | 5_3:+45397003 | Msa0813930:CDS |
| TCGAAGGGATCCGGCTAAGG+CGG | 0.531883 | 5_3:+45396935 | Msa0813930:CDS |
| TGGTGTTTGATGATTTATGC+AGG | 0.533186 | 5_3:+45397447 | Msa0813930:CDS |
| TGATTCTGAAGAAGAGGATG+AGG | 0.534419 | 5_3:+45396278 | Msa0813930:CDS |
| TCGCATAATCTTCGCTCACT+CGG | 0.534587 | 5_3:-45396621 | None:intergenic |
| TATGCAGGGTTCAATCTACA+TGG | 0.536987 | 5_3:+45397462 | Msa0813930:CDS |
| GTTGGAGAATTTGATTCGAA+GGG | 0.538931 | 5_3:+45396920 | Msa0813930:CDS |
| TGTTCACAAAATGCAGTGGC+AGG | 0.547500 | 5_3:+45396536 | Msa0813930:CDS |
| GAAGAGGATGAGGAAATTGA+CGG | 0.549221 | 5_3:+45396288 | Msa0813930:CDS |
| TTCGTGCTGCGTGTAGGTCG+CGG | 0.551910 | 5_3:+45397009 | Msa0813930:CDS |
| TGCAGTACCAAAGAAGCTCA+TGG | 0.552022 | 5_3:+45397327 | Msa0813930:CDS |
| TCACGAGATCGCGAAACGAA+TGG | 0.552800 | 5_3:+45396404 | Msa0813930:CDS |
| ATGCTGTTGCGATTGGAAGC+CGG | 0.554876 | 5_3:+45396733 | Msa0813930:CDS |
| TTACTATATGGAAGAGATTG+GGG | 0.558787 | 5_3:+45396871 | Msa0813930:CDS |
| TGGATTTATCACCGGTGAGG+TGG | 0.560283 | 5_3:-45396107 | None:intergenic |
| AGACTATGGACATCCATTGA+AGG | 0.560704 | 5_3:+45397055 | Msa0813930:CDS |
| TGGTAACAAGAGTTTCTCAA+TGG | 0.572864 | 5_3:-45397525 | None:intergenic |
| AATTGACGGTGGAGGTGAAG+AGG | 0.582467 | 5_3:+45396302 | Msa0813930:CDS |
| GCGTGCAAGACACGTGGCGA+TGG | 0.587844 | 5_3:-45396127 | None:intergenic |
| GATGAGGAAATTGACGGTGG+AGG | 0.590732 | 5_3:+45396294 | Msa0813930:CDS |
| TCTCCTCCAAGAATTCTCTC+CGG | 0.592000 | 5_3:-45396473 | None:intergenic |
| GAGGATGAGGAAATTGACGG+TGG | 0.597078 | 5_3:+45396291 | Msa0813930:CDS |
| CACGTGTCTTGCACGCGCTG+AGG | 0.603781 | 5_3:+45396134 | Msa0813930:CDS |
| TTGCCGGAGAGAATTCTTGG+AGG | 0.606882 | 5_3:+45396470 | Msa0813930:CDS |
| CTTATGCAAATTTCATTGCG+AGG | 0.608594 | 5_3:+45397549 | Msa0813930:CDS |
| GCAGAGTGGAACCACCTCAC+CGG | 0.613195 | 5_3:+45396096 | Msa0813930:CDS |
| ACACTCTTTCCCAAATCCAC+CGG | 0.617998 | 5_3:-45396430 | None:intergenic |
| AGATCGTTAATCGTCGCTGA+CGG | 0.621884 | 5_3:-45396381 | None:intergenic |
| GGTGTTTGATGATTTATGCA+GGG | 0.622468 | 5_3:+45397448 | Msa0813930:CDS |
| TGGATCAATGCAACATAATG+GGG | 0.624314 | 5_3:+45397385 | Msa0813930:CDS |
| TTTCGATGGAAGATTCTCGA+AGG | 0.631139 | 5_3:+45395879 | Msa0813930:CDS |
| AGAAAACGTAGCACAAAGCA+GGG | 0.636456 | 5_3:-45397193 | None:intergenic |
| CGTGGCGATGGATTTATCAC+CGG | 0.638141 | 5_3:-45396115 | None:intergenic |
| GAGGTGGTTCCACTCTGCAA+CGG | 0.639466 | 5_3:-45396091 | None:intergenic |
| CTCAGCGCGTGCAAGACACG+TGG | 0.639873 | 5_3:-45396133 | None:intergenic |
| TTGGAAGCCGGTCGCCAGAG+CGG | 0.641608 | 5_3:+45396745 | Msa0813930:CDS |
| GCGAAACGAATGGTTGCCGG+TGG | 0.645091 | 5_3:+45396414 | Msa0813930:CDS |
| AACGAAACTCATCCTCAAGA+CGG | 0.651495 | 5_3:-45396179 | None:intergenic |
| GATTTGTTTCAGGGAAGCAG+CGG | 0.656597 | 5_3:+45397653 | Msa0813930:CDS |
| CGTTCTCTCATGGAACGCGG+TGG | 0.656643 | 5_3:+45396198 | Msa0813930:CDS |
| CGATGGATTTATCACCGGTG+AGG | 0.664178 | 5_3:-45396110 | None:intergenic |
| AGAAGAGAAATTACTCGCTG+TGG | 0.664906 | 5_3:+45395783 | Msa0813930:CDS |
| ATCGGATGTAGTCCACCACC+CGG | 0.665264 | 5_3:-45396963 | None:intergenic |
| TAGTAGCTTCCGTTGCAGAG+TGG | 0.667358 | 5_3:+45396082 | Msa0813930:CDS |
| AAACATAGTGAGAGATTCTG+CGG | 0.669123 | 5_3:-45395993 | None:intergenic |
| ATATATTAAGTATGGAACAG+AGG | 0.672378 | 5_3:+45397610 | Msa0813930:CDS |
| TTTCGTTCTCTCATGGAACG+CGG | 0.674207 | 5_3:+45396195 | Msa0813930:CDS |
| GAATCGCTGTTCCGGTACGG+CGG | 0.676085 | 5_3:-45396240 | None:intergenic |
| AAGATGTTCACAAAATGCAG+TGG | 0.676259 | 5_3:+45396532 | Msa0813930:CDS |
| AACGGCGTCGAGAAAAGCAG+CGG | 0.676927 | 5_3:-45396052 | None:intergenic |
| GGAAGCTACTAAGTCGTCAA+CGG | 0.681900 | 5_3:-45396070 | None:intergenic |
| GAAGCTGAAATCGTTCAACA+TGG | 0.695820 | 5_3:+45397427 | Msa0813930:CDS |
| TACTATATGGAAGAGATTGG+GGG | 0.699675 | 5_3:+45396872 | Msa0813930:CDS |
| TCTTTCTGAGAAAGTCGCTG+CGG | 0.726564 | 5_3:+45395906 | Msa0813930:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GCTGATAAATATATTAAGTA+TGG | + | chr5_3:45397602-45397621 | Msa0813930:CDS | 20.0% |
| !! | GCTGATAAATATATTAAGTA+TGG | + | chr5_3:45397602-45397621 | Msa0813930:CDS | 20.0% |
| ! | AGGCCATAATAATAACAATA+TGG | + | chr5_3:45395828-45395847 | Msa0813930:CDS | 25.0% |
| !! | CAGCCATATTGTTATTATTA+TGG | - | chr5_3:45395834-45395853 | None:intergenic | 25.0% |
| ! | TTGAAGATGAAATTGAAAGA+TGG | + | chr5_3:45396562-45396581 | Msa0813930:CDS | 25.0% |
| !!! | GAAATTGAAAGATGGATTAA+AGG | + | chr5_3:45396570-45396589 | Msa0813930:CDS | 25.0% |
| ! | AATTACTATATGGAAGAGAT+TGG | + | chr5_3:45396869-45396888 | Msa0813930:CDS | 25.0% |
| ! | ATTACTATATGGAAGAGATT+GGG | + | chr5_3:45396870-45396889 | Msa0813930:CDS | 25.0% |
| ! | AGCAAAATCCAAAATCTATA+AGG | + | chr5_3:45397169-45397188 | Msa0813930:CDS | 25.0% |
| !! | TTTTCTTGATGAATAATTGC+AGG | + | chr5_3:45397210-45397229 | Msa0813930:CDS | 25.0% |
| ! | AAAAACACACTGCAAAAATT+CGG | + | chr5_3:45397294-45397313 | Msa0813930:CDS | 25.0% |
| ! | TATCTTTGATGAACAACTTA+AGG | + | chr5_3:45397487-45397506 | Msa0813930:CDS | 25.0% |
| ! | ATATATTAAGTATGGAACAG+AGG | + | chr5_3:45397610-45397629 | Msa0813930:CDS | 25.0% |
| !!! | AAAACTCAATGATTTGTTTC+AGG | + | chr5_3:45397643-45397662 | Msa0813930:CDS | 25.0% |
| !!! | AAACTCAATGATTTGTTTCA+GGG | + | chr5_3:45397644-45397663 | Msa0813930:CDS | 25.0% |
| ! | AGGCCATAATAATAACAATA+TGG | + | chr5_3:45395828-45395847 | Msa0813930:CDS | 25.0% |
| !! | CAGCCATATTGTTATTATTA+TGG | - | chr5_3:45395834-45395853 | None:intergenic | 25.0% |
| ! | TTGAAGATGAAATTGAAAGA+TGG | + | chr5_3:45396562-45396581 | Msa0813930:CDS | 25.0% |
| !!! | GAAATTGAAAGATGGATTAA+AGG | + | chr5_3:45396570-45396589 | Msa0813930:CDS | 25.0% |
| ! | AATTACTATATGGAAGAGAT+TGG | + | chr5_3:45396869-45396888 | Msa0813930:CDS | 25.0% |
| ! | ATTACTATATGGAAGAGATT+GGG | + | chr5_3:45396870-45396889 | Msa0813930:CDS | 25.0% |
| ! | AGCAAAATCCAAAATCTATA+AGG | + | chr5_3:45397169-45397188 | Msa0813930:CDS | 25.0% |
| !! | TTTTCTTGATGAATAATTGC+AGG | + | chr5_3:45397210-45397229 | Msa0813930:CDS | 25.0% |
| ! | AAAAACACACTGCAAAAATT+CGG | + | chr5_3:45397294-45397313 | Msa0813930:CDS | 25.0% |
| ! | TATCTTTGATGAACAACTTA+AGG | + | chr5_3:45397487-45397506 | Msa0813930:CDS | 25.0% |
| ! | ATATATTAAGTATGGAACAG+AGG | + | chr5_3:45397610-45397629 | Msa0813930:CDS | 25.0% |
| !!! | AAAACTCAATGATTTGTTTC+AGG | + | chr5_3:45397643-45397662 | Msa0813930:CDS | 25.0% |
| !!! | AAACTCAATGATTTGTTTCA+GGG | + | chr5_3:45397644-45397663 | Msa0813930:CDS | 25.0% |
| CAAATCTTCTCAAATTTCGA+TGG | + | chr5_3:45395865-45395884 | Msa0813930:CDS | 30.0% | |
| TTTCATCAGATCATCCAATT+TGG | + | chr5_3:45396013-45396032 | Msa0813930:CDS | 30.0% | |
| TTCATCAGATCATCCAATTT+GGG | + | chr5_3:45396014-45396033 | Msa0813930:CDS | 30.0% | |
| ACAATTTCATAATCCGTTAC+CGG | - | chr5_3:45396348-45396367 | None:intergenic | 30.0% | |
| ! | AGCTGCAGATTTTTCTTTTA+TGG | + | chr5_3:45396668-45396687 | Msa0813930:CDS | 30.0% |
| ! | TGCAGATTTTTCTTTTATGG+AGG | + | chr5_3:45396671-45396690 | Msa0813930:CDS | 30.0% |
| GGAATGAAGCAATTACTATA+TGG | + | chr5_3:45396859-45396878 | Msa0813930:CDS | 30.0% | |
| TTACTATATGGAAGAGATTG+GGG | + | chr5_3:45396871-45396890 | Msa0813930:CDS | 30.0% | |
| ! | AGCAATTAGAGGGATTTTTA+TGG | + | chr5_3:45396896-45396915 | Msa0813930:CDS | 30.0% |
| ATCTTAGGATAATCCTTCAA+TGG | - | chr5_3:45397071-45397090 | None:intergenic | 30.0% | |
| ATTGAAGGATTATCCTAAGA+TGG | + | chr5_3:45397070-45397089 | Msa0813930:CDS | 30.0% | |
| ATTATCCTAAGATGGATGAT+AGG | + | chr5_3:45397078-45397097 | Msa0813930:CDS | 30.0% | |
| TTTCTTAAGGTGGAGAATAA+TGG | + | chr5_3:45397365-45397384 | Msa0813930:CDS | 30.0% | |
| AATGGATCAATGCAACATAA+TGG | + | chr5_3:45397383-45397402 | Msa0813930:CDS | 30.0% | |
| ATGGATCAATGCAACATAAT+GGG | + | chr5_3:45397384-45397403 | Msa0813930:CDS | 30.0% | |
| CAAATCTTCTCAAATTTCGA+TGG | + | chr5_3:45395865-45395884 | Msa0813930:CDS | 30.0% | |
| TTTCATCAGATCATCCAATT+TGG | + | chr5_3:45396013-45396032 | Msa0813930:CDS | 30.0% | |
| TTCATCAGATCATCCAATTT+GGG | + | chr5_3:45396014-45396033 | Msa0813930:CDS | 30.0% | |
| ACAATTTCATAATCCGTTAC+CGG | - | chr5_3:45396348-45396367 | None:intergenic | 30.0% | |
| ! | AGCTGCAGATTTTTCTTTTA+TGG | + | chr5_3:45396668-45396687 | Msa0813930:CDS | 30.0% |
| ! | TGCAGATTTTTCTTTTATGG+AGG | + | chr5_3:45396671-45396690 | Msa0813930:CDS | 30.0% |
| GGAATGAAGCAATTACTATA+TGG | + | chr5_3:45396859-45396878 | Msa0813930:CDS | 30.0% | |
| TTACTATATGGAAGAGATTG+GGG | + | chr5_3:45396871-45396890 | Msa0813930:CDS | 30.0% | |
| ! | AGCAATTAGAGGGATTTTTA+TGG | + | chr5_3:45396896-45396915 | Msa0813930:CDS | 30.0% |
| ATCTTAGGATAATCCTTCAA+TGG | - | chr5_3:45397071-45397090 | None:intergenic | 30.0% | |
| ATTGAAGGATTATCCTAAGA+TGG | + | chr5_3:45397070-45397089 | Msa0813930:CDS | 30.0% | |
| ATTATCCTAAGATGGATGAT+AGG | + | chr5_3:45397078-45397097 | Msa0813930:CDS | 30.0% | |
| TTTCTTAAGGTGGAGAATAA+TGG | + | chr5_3:45397365-45397384 | Msa0813930:CDS | 30.0% | |
| AATGGATCAATGCAACATAA+TGG | + | chr5_3:45397383-45397402 | Msa0813930:CDS | 30.0% | |
| ATGGATCAATGCAACATAAT+GGG | + | chr5_3:45397384-45397403 | Msa0813930:CDS | 30.0% | |
| AAACATAGTGAGAGATTCTG+CGG | - | chr5_3:45395996-45396015 | None:intergenic | 35.0% | |
| TCCTCTTCTTCAGAATCAAA+CGG | - | chr5_3:45396276-45396295 | None:intergenic | 35.0% | |
| AGGAGAGTTTATCGAGATTA+GGG | + | chr5_3:45396490-45396509 | Msa0813930:CDS | 35.0% | |
| AAGATGTTCACAAAATGCAG+TGG | + | chr5_3:45396532-45396551 | Msa0813930:CDS | 35.0% | |
| ! | TCTTTTATGGAGGTTTGTAG+AGG | + | chr5_3:45396681-45396700 | Msa0813930:CDS | 35.0% |
| ! | AGAATTTTAAACAACCGCTC+TGG | - | chr5_3:45396762-45396781 | None:intergenic | 35.0% |
| ! | AGAGCGGTTGTTTAAAATTC+TGG | + | chr5_3:45396761-45396780 | Msa0813930:CDS | 35.0% |
| AACATTGCGTGACCTAATTT+CGG | + | chr5_3:45396794-45396813 | Msa0813930:CDS | 35.0% | |
| ACAACTCAAACTCCGAAATT+AGG | - | chr5_3:45396809-45396828 | None:intergenic | 35.0% | |
| ATCAGTATAGTGTGTCTTTG+AGG | + | chr5_3:45396838-45396857 | Msa0813930:CDS | 35.0% | |
| TACTATATGGAAGAGATTGG+GGG | + | chr5_3:45396872-45396891 | Msa0813930:CDS | 35.0% | |
| ! | TAGAGGGATTTTTATGGAGT+TGG | + | chr5_3:45396902-45396921 | Msa0813930:CDS | 35.0% |
| ! | AGTTGGAGAATTTGATTCGA+AGG | + | chr5_3:45396919-45396938 | Msa0813930:CDS | 35.0% |
| ! | GTTGGAGAATTTGATTCGAA+GGG | + | chr5_3:45396920-45396939 | Msa0813930:CDS | 35.0% |
| AAAGCCGAAGATAGTGAATT+AGG | + | chr5_3:45397245-45397264 | Msa0813930:CDS | 35.0% | |
| TGCTCCTAATTCACTATCTT+CGG | - | chr5_3:45397252-45397271 | None:intergenic | 35.0% | |
| !!! | AGTGAATTAGGAGCACTTTT+AGG | + | chr5_3:45397257-45397276 | Msa0813930:CDS | 35.0% |
| ! | TAAGGTGTTTGGGTTTCTTA+AGG | + | chr5_3:45397352-45397371 | Msa0813930:CDS | 35.0% |
| TGGATCAATGCAACATAATG+GGG | + | chr5_3:45397385-45397404 | Msa0813930:CDS | 35.0% | |
| ! | TGGTGTTTGATGATTTATGC+AGG | + | chr5_3:45397447-45397466 | Msa0813930:CDS | 35.0% |
| ! | GGTGTTTGATGATTTATGCA+GGG | + | chr5_3:45397448-45397467 | Msa0813930:CDS | 35.0% |
| TGGTAACAAGAGTTTCTCAA+TGG | - | chr5_3:45397528-45397547 | None:intergenic | 35.0% | |
| GCAATGAAATTTGCATAAGC+TGG | - | chr5_3:45397548-45397567 | None:intergenic | 35.0% | |
| CTTATGCAAATTTCATTGCG+AGG | + | chr5_3:45397549-45397568 | Msa0813930:CDS | 35.0% | |
| TTTCAAAATGCTGCTGAAGT+TGG | + | chr5_3:45397572-45397591 | Msa0813930:CDS | 35.0% | |
| AAACATAGTGAGAGATTCTG+CGG | - | chr5_3:45395996-45396015 | None:intergenic | 35.0% | |
| TCCTCTTCTTCAGAATCAAA+CGG | - | chr5_3:45396276-45396295 | None:intergenic | 35.0% | |
| AGGAGAGTTTATCGAGATTA+GGG | + | chr5_3:45396490-45396509 | Msa0813930:CDS | 35.0% | |
| AAGATGTTCACAAAATGCAG+TGG | + | chr5_3:45396532-45396551 | Msa0813930:CDS | 35.0% | |
| ! | TCTTTTATGGAGGTTTGTAG+AGG | + | chr5_3:45396681-45396700 | Msa0813930:CDS | 35.0% |
| ! | AGAATTTTAAACAACCGCTC+TGG | - | chr5_3:45396762-45396781 | None:intergenic | 35.0% |
| ! | AGAGCGGTTGTTTAAAATTC+TGG | + | chr5_3:45396761-45396780 | Msa0813930:CDS | 35.0% |
| AACATTGCGTGACCTAATTT+CGG | + | chr5_3:45396794-45396813 | Msa0813930:CDS | 35.0% | |
| ACAACTCAAACTCCGAAATT+AGG | - | chr5_3:45396809-45396828 | None:intergenic | 35.0% | |
| ATCAGTATAGTGTGTCTTTG+AGG | + | chr5_3:45396838-45396857 | Msa0813930:CDS | 35.0% | |
| TACTATATGGAAGAGATTGG+GGG | + | chr5_3:45396872-45396891 | Msa0813930:CDS | 35.0% | |
| ! | TAGAGGGATTTTTATGGAGT+TGG | + | chr5_3:45396902-45396921 | Msa0813930:CDS | 35.0% |
| ! | AGTTGGAGAATTTGATTCGA+AGG | + | chr5_3:45396919-45396938 | Msa0813930:CDS | 35.0% |
| ! | GTTGGAGAATTTGATTCGAA+GGG | + | chr5_3:45396920-45396939 | Msa0813930:CDS | 35.0% |
| AAAGCCGAAGATAGTGAATT+AGG | + | chr5_3:45397245-45397264 | Msa0813930:CDS | 35.0% | |
| TGCTCCTAATTCACTATCTT+CGG | - | chr5_3:45397252-45397271 | None:intergenic | 35.0% | |
| !!! | AGTGAATTAGGAGCACTTTT+AGG | + | chr5_3:45397257-45397276 | Msa0813930:CDS | 35.0% |
| ! | TAAGGTGTTTGGGTTTCTTA+AGG | + | chr5_3:45397352-45397371 | Msa0813930:CDS | 35.0% |
| TGGATCAATGCAACATAATG+GGG | + | chr5_3:45397385-45397404 | Msa0813930:CDS | 35.0% | |
| ! | TGGTGTTTGATGATTTATGC+AGG | + | chr5_3:45397447-45397466 | Msa0813930:CDS | 35.0% |
| ! | GGTGTTTGATGATTTATGCA+GGG | + | chr5_3:45397448-45397467 | Msa0813930:CDS | 35.0% |
| TGGTAACAAGAGTTTCTCAA+TGG | - | chr5_3:45397528-45397547 | None:intergenic | 35.0% | |
| GCAATGAAATTTGCATAAGC+TGG | - | chr5_3:45397548-45397567 | None:intergenic | 35.0% | |
| CTTATGCAAATTTCATTGCG+AGG | + | chr5_3:45397549-45397568 | Msa0813930:CDS | 35.0% | |
| TTTCAAAATGCTGCTGAAGT+TGG | + | chr5_3:45397572-45397591 | Msa0813930:CDS | 35.0% | |
| AGAAGAGAAATTACTCGCTG+TGG | + | chr5_3:45395783-45395802 | Msa0813930:CDS | 40.0% | |
| TTTCGATGGAAGATTCTCGA+AGG | + | chr5_3:45395879-45395898 | Msa0813930:CDS | 40.0% | |
| AACGAAACTCATCCTCAAGA+CGG | - | chr5_3:45396182-45396201 | None:intergenic | 40.0% | |
| ! | ACCGTTTGATTCTGAAGAAG+AGG | + | chr5_3:45396272-45396291 | Msa0813930:CDS | 40.0% |
| ! | TGATTCTGAAGAAGAGGATG+AGG | + | chr5_3:45396278-45396297 | Msa0813930:CDS | 40.0% |
| GAAGAGGATGAGGAAATTGA+CGG | + | chr5_3:45396288-45396307 | Msa0813930:CDS | 40.0% | |
| GAGGAGAGTTTATCGAGATT+AGG | + | chr5_3:45396489-45396508 | Msa0813930:CDS | 40.0% | |
| !!! | TTATGCGATCGCGTGTTTTT+TGG | + | chr5_3:45396636-45396655 | Msa0813930:CDS | 40.0% |
| ! | GAATTTGATTCGAAGGGATC+CGG | + | chr5_3:45396926-45396945 | Msa0813930:CDS | 40.0% |
| TTCATCACGTAACGCGTAAT+CGG | - | chr5_3:45396984-45397003 | None:intergenic | 40.0% | |
| ! | GAGCAAGTCTTTGAAGACTA+TGG | + | chr5_3:45397041-45397060 | Msa0813930:CDS | 40.0% |
| AGACTATGGACATCCATTGA+AGG | + | chr5_3:45397055-45397074 | Msa0813930:CDS | 40.0% | |
| TGCATCCTATCATCCATCTT+AGG | - | chr5_3:45397086-45397105 | None:intergenic | 40.0% | |
| GCATTCATCTTCGTCTTTGT+CGG | + | chr5_3:45397103-45397122 | Msa0813930:CDS | 40.0% | |
| !! | GGTGCAAATGGATTGGATTA+TGG | + | chr5_3:45397124-45397143 | Msa0813930:CDS | 40.0% |
| GGAGCTATTAGAGAGCAATT+TGG | + | chr5_3:45397145-45397164 | Msa0813930:CDS | 40.0% | |
| ! | AGCAGGGTCCTTATAGATTT+TGG | - | chr5_3:45397180-45397199 | None:intergenic | 40.0% |
| AGAAAACGTAGCACAAAGCA+GGG | - | chr5_3:45397196-45397215 | None:intergenic | 40.0% | |
| AAGAAAACGTAGCACAAAGC+AGG | - | chr5_3:45397197-45397216 | None:intergenic | 40.0% | |
| !! | GAGCACTTTTAGGAGATGAT+TGG | + | chr5_3:45397267-45397286 | Msa0813930:CDS | 40.0% |
| AGCTTCTTTGGTACTGCATA+TGG | - | chr5_3:45397325-45397344 | None:intergenic | 40.0% | |
| CCTTATTCCATGAGCTTCTT+TGG | - | chr5_3:45397337-45397356 | None:intergenic | 40.0% | |
| CCAAAGAAGCTCATGGAATA+AGG | + | chr5_3:45397334-45397353 | Msa0813930:CDS | 40.0% | |
| ! | AGCTCATGGAATAAGGTGTT+TGG | + | chr5_3:45397341-45397360 | Msa0813930:CDS | 40.0% |
| ! | GCTCATGGAATAAGGTGTTT+GGG | + | chr5_3:45397342-45397361 | Msa0813930:CDS | 40.0% |
| GAAGCTGAAATCGTTCAACA+TGG | + | chr5_3:45397427-45397446 | Msa0813930:CDS | 40.0% | |
| TATGCAGGGTTCAATCTACA+TGG | + | chr5_3:45397462-45397481 | Msa0813930:CDS | 40.0% | |
| AGAAGAGAAATTACTCGCTG+TGG | + | chr5_3:45395783-45395802 | Msa0813930:CDS | 40.0% | |
| TTTCGATGGAAGATTCTCGA+AGG | + | chr5_3:45395879-45395898 | Msa0813930:CDS | 40.0% | |
| AACGAAACTCATCCTCAAGA+CGG | - | chr5_3:45396182-45396201 | None:intergenic | 40.0% | |
| ! | ACCGTTTGATTCTGAAGAAG+AGG | + | chr5_3:45396272-45396291 | Msa0813930:CDS | 40.0% |
| ! | TGATTCTGAAGAAGAGGATG+AGG | + | chr5_3:45396278-45396297 | Msa0813930:CDS | 40.0% |
| GAAGAGGATGAGGAAATTGA+CGG | + | chr5_3:45396288-45396307 | Msa0813930:CDS | 40.0% | |
| GAGGAGAGTTTATCGAGATT+AGG | + | chr5_3:45396489-45396508 | Msa0813930:CDS | 40.0% | |
| !!! | TTATGCGATCGCGTGTTTTT+TGG | + | chr5_3:45396636-45396655 | Msa0813930:CDS | 40.0% |
| ! | GAATTTGATTCGAAGGGATC+CGG | + | chr5_3:45396926-45396945 | Msa0813930:CDS | 40.0% |
| TTCATCACGTAACGCGTAAT+CGG | - | chr5_3:45396984-45397003 | None:intergenic | 40.0% | |
| ! | GAGCAAGTCTTTGAAGACTA+TGG | + | chr5_3:45397041-45397060 | Msa0813930:CDS | 40.0% |
| AGACTATGGACATCCATTGA+AGG | + | chr5_3:45397055-45397074 | Msa0813930:CDS | 40.0% | |
| TGCATCCTATCATCCATCTT+AGG | - | chr5_3:45397086-45397105 | None:intergenic | 40.0% | |
| GCATTCATCTTCGTCTTTGT+CGG | + | chr5_3:45397103-45397122 | Msa0813930:CDS | 40.0% | |
| !! | GGTGCAAATGGATTGGATTA+TGG | + | chr5_3:45397124-45397143 | Msa0813930:CDS | 40.0% |
| GGAGCTATTAGAGAGCAATT+TGG | + | chr5_3:45397145-45397164 | Msa0813930:CDS | 40.0% | |
| ! | AGCAGGGTCCTTATAGATTT+TGG | - | chr5_3:45397180-45397199 | None:intergenic | 40.0% |
| AGAAAACGTAGCACAAAGCA+GGG | - | chr5_3:45397196-45397215 | None:intergenic | 40.0% | |
| AAGAAAACGTAGCACAAAGC+AGG | - | chr5_3:45397197-45397216 | None:intergenic | 40.0% | |
| !! | GAGCACTTTTAGGAGATGAT+TGG | + | chr5_3:45397267-45397286 | Msa0813930:CDS | 40.0% |
| AGCTTCTTTGGTACTGCATA+TGG | - | chr5_3:45397325-45397344 | None:intergenic | 40.0% | |
| CCTTATTCCATGAGCTTCTT+TGG | - | chr5_3:45397337-45397356 | None:intergenic | 40.0% | |
| CCAAAGAAGCTCATGGAATA+AGG | + | chr5_3:45397334-45397353 | Msa0813930:CDS | 40.0% | |
| ! | AGCTCATGGAATAAGGTGTT+TGG | + | chr5_3:45397341-45397360 | Msa0813930:CDS | 40.0% |
| ! | GCTCATGGAATAAGGTGTTT+GGG | + | chr5_3:45397342-45397361 | Msa0813930:CDS | 40.0% |
| GAAGCTGAAATCGTTCAACA+TGG | + | chr5_3:45397427-45397446 | Msa0813930:CDS | 40.0% | |
| TATGCAGGGTTCAATCTACA+TGG | + | chr5_3:45397462-45397481 | Msa0813930:CDS | 40.0% | |
| CGTCACATAGCAAAAACGCT+AGG | + | chr5_3:45395808-45395827 | Msa0813930:CDS | 45.0% | |
| ! | TCTTTCTGAGAAAGTCGCTG+CGG | + | chr5_3:45395906-45395925 | Msa0813930:CDS | 45.0% |
| CAGAGATCCAAGAGCTTTCA+CGG | + | chr5_3:45395942-45395961 | Msa0813930:CDS | 45.0% | |
| GGAAGCTACTAAGTCGTCAA+CGG | - | chr5_3:45396073-45396092 | None:intergenic | 45.0% | |
| GGATGAGTTTCGTTCTCTCA+TGG | + | chr5_3:45396188-45396207 | Msa0813930:CDS | 45.0% | |
| TTTCGTTCTCTCATGGAACG+CGG | + | chr5_3:45396195-45396214 | Msa0813930:CDS | 45.0% | |
| AATTCACCGAATCGCTGTTC+CGG | - | chr5_3:45396251-45396270 | None:intergenic | 45.0% | |
| AGGTGAAGAGGATCTGATTC+CGG | + | chr5_3:45396314-45396333 | Msa0813930:CDS | 45.0% | |
| AGATCGTTAATCGTCGCTGA+CGG | - | chr5_3:45396384-45396403 | None:intergenic | 45.0% | |
| ACACTCTTTCCCAAATCCAC+CGG | - | chr5_3:45396433-45396452 | None:intergenic | 45.0% | |
| CGCATGTTTACAGTAGTTGC+CGG | + | chr5_3:45396454-45396473 | Msa0813930:CDS | 45.0% | |
| TAGTTGCCGGAGAGAATTCT+TGG | + | chr5_3:45396467-45396486 | Msa0813930:CDS | 45.0% | |
| TCTCCTCCAAGAATTCTCTC+CGG | - | chr5_3:45396476-45396495 | None:intergenic | 45.0% | |
| TGTTCACAAAATGCAGTGGC+AGG | + | chr5_3:45396536-45396555 | Msa0813930:CDS | 45.0% | |
| TCGCATAATCTTCGCTCACT+CGG | - | chr5_3:45396624-45396643 | None:intergenic | 45.0% | |
| AGATTGGGGGAAGCAATTAG+AGG | + | chr5_3:45396885-45396904 | Msa0813930:CDS | 45.0% | |
| GATTGGGGGAAGCAATTAGA+GGG | + | chr5_3:45396886-45396905 | Msa0813930:CDS | 45.0% | |
| TTCGTCTTTGTCGGTGCAAA+TGG | + | chr5_3:45397112-45397131 | Msa0813930:CDS | 45.0% | |
| CTTTGTCGGTGCAAATGGAT+TGG | + | chr5_3:45397117-45397136 | Msa0813930:CDS | 45.0% | |
| TGCAGTACCAAAGAAGCTCA+TGG | + | chr5_3:45397327-45397346 | Msa0813930:CDS | 45.0% | |
| ! | GGTGTTTGGGTTTCTTAAGG+TGG | + | chr5_3:45397355-45397374 | Msa0813930:CDS | 45.0% |
| ! | GATTTGTTTCAGGGAAGCAG+CGG | + | chr5_3:45397653-45397672 | Msa0813930:CDS | 45.0% |
| CGTCACATAGCAAAAACGCT+AGG | + | chr5_3:45395808-45395827 | Msa0813930:CDS | 45.0% | |
| ! | TCTTTCTGAGAAAGTCGCTG+CGG | + | chr5_3:45395906-45395925 | Msa0813930:CDS | 45.0% |
| CAGAGATCCAAGAGCTTTCA+CGG | + | chr5_3:45395942-45395961 | Msa0813930:CDS | 45.0% | |
| GGAAGCTACTAAGTCGTCAA+CGG | - | chr5_3:45396073-45396092 | None:intergenic | 45.0% | |
| GGATGAGTTTCGTTCTCTCA+TGG | + | chr5_3:45396188-45396207 | Msa0813930:CDS | 45.0% | |
| TTTCGTTCTCTCATGGAACG+CGG | + | chr5_3:45396195-45396214 | Msa0813930:CDS | 45.0% | |
| AATTCACCGAATCGCTGTTC+CGG | - | chr5_3:45396251-45396270 | None:intergenic | 45.0% | |
| AGGTGAAGAGGATCTGATTC+CGG | + | chr5_3:45396314-45396333 | Msa0813930:CDS | 45.0% | |
| AGATCGTTAATCGTCGCTGA+CGG | - | chr5_3:45396384-45396403 | None:intergenic | 45.0% | |
| ACACTCTTTCCCAAATCCAC+CGG | - | chr5_3:45396433-45396452 | None:intergenic | 45.0% | |
| CGCATGTTTACAGTAGTTGC+CGG | + | chr5_3:45396454-45396473 | Msa0813930:CDS | 45.0% | |
| TAGTTGCCGGAGAGAATTCT+TGG | + | chr5_3:45396467-45396486 | Msa0813930:CDS | 45.0% | |
| TCTCCTCCAAGAATTCTCTC+CGG | - | chr5_3:45396476-45396495 | None:intergenic | 45.0% | |
| TGTTCACAAAATGCAGTGGC+AGG | + | chr5_3:45396536-45396555 | Msa0813930:CDS | 45.0% | |
| TCGCATAATCTTCGCTCACT+CGG | - | chr5_3:45396624-45396643 | None:intergenic | 45.0% | |
| AGATTGGGGGAAGCAATTAG+AGG | + | chr5_3:45396885-45396904 | Msa0813930:CDS | 45.0% | |
| GATTGGGGGAAGCAATTAGA+GGG | + | chr5_3:45396886-45396905 | Msa0813930:CDS | 45.0% | |
| TTCGTCTTTGTCGGTGCAAA+TGG | + | chr5_3:45397112-45397131 | Msa0813930:CDS | 45.0% | |
| CTTTGTCGGTGCAAATGGAT+TGG | + | chr5_3:45397117-45397136 | Msa0813930:CDS | 45.0% | |
| TGCAGTACCAAAGAAGCTCA+TGG | + | chr5_3:45397327-45397346 | Msa0813930:CDS | 45.0% | |
| ! | GGTGTTTGGGTTTCTTAAGG+TGG | + | chr5_3:45397355-45397374 | Msa0813930:CDS | 45.0% |
| ! | GATTTGTTTCAGGGAAGCAG+CGG | + | chr5_3:45397653-45397672 | Msa0813930:CDS | 45.0% |
| TCCAAGAGCTTTCACGGCTT+TGG | + | chr5_3:45395948-45395967 | Msa0813930:CDS | 50.0% | |
| TCCAAAGCCGTGAAAGCTCT+TGG | - | chr5_3:45395952-45395971 | None:intergenic | 50.0% | |
| TCAGCAGAGTCTGCCCAAAT+TGG | - | chr5_3:45396030-45396049 | None:intergenic | 50.0% | |
| TAGTAGCTTCCGTTGCAGAG+TGG | + | chr5_3:45396082-45396101 | Msa0813930:CDS | 50.0% | |
| TGGATTTATCACCGGTGAGG+TGG | - | chr5_3:45396110-45396129 | None:intergenic | 50.0% | |
| ! | CGATGGATTTATCACCGGTG+AGG | - | chr5_3:45396113-45396132 | None:intergenic | 50.0% |
| ! | CGTGGCGATGGATTTATCAC+CGG | - | chr5_3:45396118-45396137 | None:intergenic | 50.0% |
| ACACGCTATGTTCCGTCTTG+AGG | + | chr5_3:45396167-45396186 | Msa0813930:CDS | 50.0% | |
| GAGGATGAGGAAATTGACGG+TGG | + | chr5_3:45396291-45396310 | Msa0813930:CDS | 50.0% | |
| GATGAGGAAATTGACGGTGG+AGG | + | chr5_3:45396294-45396313 | Msa0813930:CDS | 50.0% | |
| AATTGACGGTGGAGGTGAAG+AGG | + | chr5_3:45396302-45396321 | Msa0813930:CDS | 50.0% | |
| TCACGAGATCGCGAAACGAA+TGG | + | chr5_3:45396404-45396423 | Msa0813930:CDS | 50.0% | |
| ATCGCGAAACGAATGGTTGC+CGG | + | chr5_3:45396411-45396430 | Msa0813930:CDS | 50.0% | |
| ! | GAATGGTTGCCGGTGGATTT+GGG | + | chr5_3:45396421-45396440 | Msa0813930:CDS | 50.0% |
| TTGCCGGAGAGAATTCTTGG+AGG | + | chr5_3:45396470-45396489 | Msa0813930:CDS | 50.0% | |
| TTCGCAGATGCTGTTGCGAT+TGG | + | chr5_3:45396726-45396745 | Msa0813930:CDS | 50.0% | |
| ATGCTGTTGCGATTGGAAGC+CGG | + | chr5_3:45396733-45396752 | Msa0813930:CDS | 50.0% | |
| ATTACCTTCGTGCTGCGTGT+AGG | + | chr5_3:45397003-45397022 | Msa0813930:CDS | 50.0% | |
| TTAGCTTCGCTTTCGGCTAC+CGG | - | chr5_3:45397684-45397703 | None:intergenic | 50.0% | |
| TCCAAGAGCTTTCACGGCTT+TGG | + | chr5_3:45395948-45395967 | Msa0813930:CDS | 50.0% | |
| TCCAAAGCCGTGAAAGCTCT+TGG | - | chr5_3:45395952-45395971 | None:intergenic | 50.0% | |
| TCAGCAGAGTCTGCCCAAAT+TGG | - | chr5_3:45396030-45396049 | None:intergenic | 50.0% | |
| TAGTAGCTTCCGTTGCAGAG+TGG | + | chr5_3:45396082-45396101 | Msa0813930:CDS | 50.0% | |
| TGGATTTATCACCGGTGAGG+TGG | - | chr5_3:45396110-45396129 | None:intergenic | 50.0% | |
| ! | CGATGGATTTATCACCGGTG+AGG | - | chr5_3:45396113-45396132 | None:intergenic | 50.0% |
| ! | CGTGGCGATGGATTTATCAC+CGG | - | chr5_3:45396118-45396137 | None:intergenic | 50.0% |
| ACACGCTATGTTCCGTCTTG+AGG | + | chr5_3:45396167-45396186 | Msa0813930:CDS | 50.0% | |
| GAGGATGAGGAAATTGACGG+TGG | + | chr5_3:45396291-45396310 | Msa0813930:CDS | 50.0% | |
| GATGAGGAAATTGACGGTGG+AGG | + | chr5_3:45396294-45396313 | Msa0813930:CDS | 50.0% | |
| AATTGACGGTGGAGGTGAAG+AGG | + | chr5_3:45396302-45396321 | Msa0813930:CDS | 50.0% | |
| TCACGAGATCGCGAAACGAA+TGG | + | chr5_3:45396404-45396423 | Msa0813930:CDS | 50.0% | |
| ATCGCGAAACGAATGGTTGC+CGG | + | chr5_3:45396411-45396430 | Msa0813930:CDS | 50.0% | |
| ! | GAATGGTTGCCGGTGGATTT+GGG | + | chr5_3:45396421-45396440 | Msa0813930:CDS | 50.0% |
| TTGCCGGAGAGAATTCTTGG+AGG | + | chr5_3:45396470-45396489 | Msa0813930:CDS | 50.0% | |
| TTCGCAGATGCTGTTGCGAT+TGG | + | chr5_3:45396726-45396745 | Msa0813930:CDS | 50.0% | |
| ATGCTGTTGCGATTGGAAGC+CGG | + | chr5_3:45396733-45396752 | Msa0813930:CDS | 50.0% | |
| ATTACCTTCGTGCTGCGTGT+AGG | + | chr5_3:45397003-45397022 | Msa0813930:CDS | 50.0% | |
| TTAGCTTCGCTTTCGGCTAC+CGG | - | chr5_3:45397684-45397703 | None:intergenic | 50.0% | |
| ! | AACGGCGTCGAGAAAAGCAG+CGG | - | chr5_3:45396055-45396074 | None:intergenic | 55.0% |
| GAGGTGGTTCCACTCTGCAA+CGG | - | chr5_3:45396094-45396113 | None:intergenic | 55.0% | |
| TTGACTTAACGCCGCCGTAC+CGG | + | chr5_3:45396229-45396248 | Msa0813930:CDS | 55.0% | |
| ACCGAATCGCTGTTCCGGTA+CGG | - | chr5_3:45396246-45396265 | None:intergenic | 55.0% | |
| TCTGATTCCGGTTGCGATGC+CGG | + | chr5_3:45396326-45396345 | Msa0813930:CDS | 55.0% | |
| ! | CGAATGGTTGCCGGTGGATT+TGG | + | chr5_3:45396420-45396439 | Msa0813930:CDS | 55.0% |
| TAAACAACCGCTCTGGCGAC+CGG | - | chr5_3:45396755-45396774 | None:intergenic | 55.0% | |
| GATTCGAAGGGATCCGGCTA+AGG | + | chr5_3:45396932-45396951 | Msa0813930:CDS | 55.0% | |
| ATCGGATGTAGTCCACCACC+CGG | - | chr5_3:45396966-45396985 | None:intergenic | 55.0% | |
| ! | AACGGCGTCGAGAAAAGCAG+CGG | - | chr5_3:45396055-45396074 | None:intergenic | 55.0% |
| GAGGTGGTTCCACTCTGCAA+CGG | - | chr5_3:45396094-45396113 | None:intergenic | 55.0% | |
| TTGACTTAACGCCGCCGTAC+CGG | + | chr5_3:45396229-45396248 | Msa0813930:CDS | 55.0% | |
| ACCGAATCGCTGTTCCGGTA+CGG | - | chr5_3:45396246-45396265 | None:intergenic | 55.0% | |
| TCTGATTCCGGTTGCGATGC+CGG | + | chr5_3:45396326-45396345 | Msa0813930:CDS | 55.0% | |
| ! | CGAATGGTTGCCGGTGGATT+TGG | + | chr5_3:45396420-45396439 | Msa0813930:CDS | 55.0% |
| TAAACAACCGCTCTGGCGAC+CGG | - | chr5_3:45396755-45396774 | None:intergenic | 55.0% | |
| GATTCGAAGGGATCCGGCTA+AGG | + | chr5_3:45396932-45396951 | Msa0813930:CDS | 55.0% | |
| ATCGGATGTAGTCCACCACC+CGG | - | chr5_3:45396966-45396985 | None:intergenic | 55.0% | |
| TGAGAAAGTCGCTGCGGTCG+AGG | + | chr5_3:45395912-45395931 | Msa0813930:CDS | 60.0% | |
| GCAGAGTGGAACCACCTCAC+CGG | + | chr5_3:45396096-45396115 | Msa0813930:CDS | 60.0% | |
| CGTTCTCTCATGGAACGCGG+TGG | + | chr5_3:45396198-45396217 | Msa0813930:CDS | 60.0% | |
| GAATCGCTGTTCCGGTACGG+CGG | - | chr5_3:45396243-45396262 | None:intergenic | 60.0% | |
| GCCGTACCGGAACAGCGATT+CGG | + | chr5_3:45396242-45396261 | Msa0813930:CDS | 60.0% | |
| TCCGGTTGCGATGCCGGTAA+CGG | + | chr5_3:45396332-45396351 | Msa0813930:CDS | 60.0% | |
| TCCGTTACCGGCATCGCAAC+CGG | - | chr5_3:45396336-45396355 | None:intergenic | 60.0% | |
| GCGAAACGAATGGTTGCCGG+TGG | + | chr5_3:45396414-45396433 | Msa0813930:CDS | 60.0% | |
| TCGAAGGGATCCGGCTAAGG+CGG | + | chr5_3:45396935-45396954 | Msa0813930:CDS | 60.0% | |
| TTCGTGCTGCGTGTAGGTCG+CGG | + | chr5_3:45397009-45397028 | Msa0813930:CDS | 60.0% | |
| GTGTAGGTCGCGGCAGACTT+TGG | + | chr5_3:45397019-45397038 | Msa0813930:CDS | 60.0% | |
| CAGGGAAGCAGCGGATCAAC+CGG | + | chr5_3:45397662-45397681 | Msa0813930:CDS | 60.0% | |
| TGAGAAAGTCGCTGCGGTCG+AGG | + | chr5_3:45395912-45395931 | Msa0813930:CDS | 60.0% | |
| GCAGAGTGGAACCACCTCAC+CGG | + | chr5_3:45396096-45396115 | Msa0813930:CDS | 60.0% | |
| CGTTCTCTCATGGAACGCGG+TGG | + | chr5_3:45396198-45396217 | Msa0813930:CDS | 60.0% | |
| GAATCGCTGTTCCGGTACGG+CGG | - | chr5_3:45396243-45396262 | None:intergenic | 60.0% | |
| GCCGTACCGGAACAGCGATT+CGG | + | chr5_3:45396242-45396261 | Msa0813930:CDS | 60.0% | |
| TCCGGTTGCGATGCCGGTAA+CGG | + | chr5_3:45396332-45396351 | Msa0813930:CDS | 60.0% | |
| TCCGTTACCGGCATCGCAAC+CGG | - | chr5_3:45396336-45396355 | None:intergenic | 60.0% | |
| GCGAAACGAATGGTTGCCGG+TGG | + | chr5_3:45396414-45396433 | Msa0813930:CDS | 60.0% | |
| TCGAAGGGATCCGGCTAAGG+CGG | + | chr5_3:45396935-45396954 | Msa0813930:CDS | 60.0% | |
| TTCGTGCTGCGTGTAGGTCG+CGG | + | chr5_3:45397009-45397028 | Msa0813930:CDS | 60.0% | |
| GTGTAGGTCGCGGCAGACTT+TGG | + | chr5_3:45397019-45397038 | Msa0813930:CDS | 60.0% | |
| CAGGGAAGCAGCGGATCAAC+CGG | + | chr5_3:45397662-45397681 | Msa0813930:CDS | 60.0% | |
| GCGTGCAAGACACGTGGCGA+TGG | - | chr5_3:45396130-45396149 | None:intergenic | 65.0% | |
| CTCAGCGCGTGCAAGACACG+TGG | - | chr5_3:45396136-45396155 | None:intergenic | 65.0% | |
| CACGTGTCTTGCACGCGCTG+AGG | + | chr5_3:45396134-45396153 | Msa0813930:CDS | 65.0% | |
| TTGGAAGCCGGTCGCCAGAG+CGG | + | chr5_3:45396745-45396764 | Msa0813930:CDS | 65.0% | |
| CGAAGGGATCCGGCTAAGGC+GGG | + | chr5_3:45396936-45396955 | Msa0813930:CDS | 65.0% | |
| TCCGGCTAAGGCGGGTGTTC+CGG | + | chr5_3:45396944-45396963 | Msa0813930:CDS | 65.0% | |
| GCGACCTACACGCAGCACGA+AGG | - | chr5_3:45397010-45397029 | None:intergenic | 65.0% | |
| GCGTGCAAGACACGTGGCGA+TGG | - | chr5_3:45396130-45396149 | None:intergenic | 65.0% | |
| CTCAGCGCGTGCAAGACACG+TGG | - | chr5_3:45396136-45396155 | None:intergenic | 65.0% | |
| CACGTGTCTTGCACGCGCTG+AGG | + | chr5_3:45396134-45396153 | Msa0813930:CDS | 65.0% | |
| TTGGAAGCCGGTCGCCAGAG+CGG | + | chr5_3:45396745-45396764 | Msa0813930:CDS | 65.0% | |
| CGAAGGGATCCGGCTAAGGC+GGG | + | chr5_3:45396936-45396955 | Msa0813930:CDS | 65.0% | |
| TCCGGCTAAGGCGGGTGTTC+CGG | + | chr5_3:45396944-45396963 | Msa0813930:CDS | 65.0% | |
| GCGACCTACACGCAGCACGA+AGG | - | chr5_3:45397010-45397029 | None:intergenic | 65.0% | |
| CCCGGAACACCCGCCTTAGC+CGG | - | chr5_3:45396948-45396967 | None:intergenic | 70.0% | |
| CCGGCTAAGGCGGGTGTTCC+GGG | + | chr5_3:45396945-45396964 | Msa0813930:CDS | 70.0% | |
| GCTAAGGCGGGTGTTCCGGG+TGG | + | chr5_3:45396948-45396967 | Msa0813930:CDS | 70.0% | |
| AAGGCGGGTGTTCCGGGTGG+TGG | + | chr5_3:45396951-45396970 | Msa0813930:CDS | 70.0% | |
| CCCGGAACACCCGCCTTAGC+CGG | - | chr5_3:45396948-45396967 | None:intergenic | 70.0% | |
| CCGGCTAAGGCGGGTGTTCC+GGG | + | chr5_3:45396945-45396964 | Msa0813930:CDS | 70.0% | |
| GCTAAGGCGGGTGTTCCGGG+TGG | + | chr5_3:45396948-45396967 | Msa0813930:CDS | 70.0% | |
| AAGGCGGGTGTTCCGGGTGG+TGG | + | chr5_3:45396951-45396970 | Msa0813930:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 45395769 | 45397703 | 45395769 | ID=Msa0813930;Name=Msa0813930 |
| chr5_3 | mRNA | 45395769 | 45397703 | 45395769 | ID=Msa0813930-mRNA-1;Parent=Msa0813930;Name=Msa0813930-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|-1|0|1|-1|1|1|0|644 |
| chr5_3 | exon | 45395769 | 45397703 | 45395769 | ID=Msa0813930-mRNA-1:exon:13885;Parent=Msa0813930-mRNA-1 |
| chr5_3 | CDS | 45395769 | 45397703 | 45395769 | ID=Msa0813930-mRNA-1:cds;Parent=Msa0813930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
