AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0816900

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0816900 MtrunA17_Chr5g0435701 98.161 1142 21 0 1 1142 1 1142 0.0 2334
Msa0816900 MtrunA17_Chr3g0112241 78.759 1144 241 2 1 1142 1 1144 0.0 1883
Msa0816900 MtrunA17_Chr3g0112221 76.661 1144 262 5 4 1142 2 1145 0.0 1810
Msa0816900 MtrunA17_Chr6g0485251 42.487 1118 551 21 31 1135 35 1073 0.0 819
Msa0816900 MtrunA17_Chr8g0351691 27.590 888 540 21 303 1114 334 1194 8.48e-92 324
Msa0816900 MtrunA17_Chr7g0245901 25.278 1171 698 31 103 1135 81 1212 1.00e-89 318
Msa0816900 MtrunA17_Chr5g0448771 25.666 1126 653 35 95 1114 74 1121 3.31e-81 292
Msa0816900 MtrunA17_Chr4g0069791 24.867 937 583 28 115 976 138 1028 3.33e-59 223
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0816900 AT1G13980.2 72.767 1142 303 4 4 1142 2 1138 0.0 1731
Msa0816900 AT1G13980.1 72.767 1142 303 4 4 1142 2 1138 0.0 1731
Msa0816900 AT5G39500.1 63.475 1128 376 9 28 1142 25 1129 0.0 1452
Msa0816900 AT5G39500.2 63.475 1128 376 9 28 1142 25 1129 0.0 1452
Msa0816900 AT5G19610.1 39.537 1123 582 22 31 1135 14 1057 0.0 761
Msa0816900 AT1G01960.1 26.945 861 523 17 355 1135 367 1201 1.46e-83 300
Msa0816900 AT3G60860.1 24.312 1090 668 28 98 1068 88 1139 8.83e-80 288
Msa0816900 AT4G38200.1 25.453 1104 674 34 95 1114 72 1110 1.41e-77 281
Msa0816900 AT4G35380.1 24.801 1129 695 30 40 1072 17 1087 5.10e-71 261
Msa0816900 AT4G38200.2 27.861 603 359 14 561 1114 115 690 2.30e-60 227
Msa0816900 AT3G43300.3 25.261 863 537 26 111 906 122 943 1.72e-59 225
Msa0816900 AT3G43300.2 25.261 863 537 26 111 906 122 943 2.77e-59 224
Msa0816900 AT4G35380.2 29.476 553 326 10 561 1072 120 649 1.40e-56 215
Msa0816900 AT3G43300.1 24.717 882 537 27 111 906 122 962 2.44e-56 215

Find 238 sgRNAs with CRISPR-Local

Find 650 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACGACTCGGGGTCATTTC+TGG 0.140460 5_3:-51693723 None:intergenic
TTGCAAGTTTGTTACTATTT+TGG 0.148925 5_3:+51693989 Msa0816900:CDS
TTCTGCAATCTTATGCAATT+TGG 0.172297 5_3:+51692604 Msa0816900:CDS
TTCCCTTGTTCAATCTTTAA+AGG 0.183339 5_3:+51687614 Msa0816900:CDS
TTGAAGAGTATACACCATTT+TGG 0.228976 5_3:+51693049 Msa0816900:CDS
TTCAATCTTTAAAGGCATTA+AGG 0.237363 5_3:+51687622 Msa0816900:CDS
AGACTTGCACAAAGCAAATA+TGG 0.240247 5_3:+51692745 Msa0816900:CDS
GGGTTGGATAAGAATCTTAT+TGG 0.242129 5_3:+51693276 Msa0816900:CDS
ACAGAGCATGCTTTGGTAAA+TGG 0.251040 5_3:+51688113 Msa0816900:CDS
TAGATTGTTGAGCTTAATTC+AGG 0.258183 5_3:+51692573 Msa0816900:CDS
GAGATAGAATTGAACTTCTT+TGG 0.276721 5_3:+51694600 Msa0816900:CDS
GAGTCCCCTTGTACTTTCTA+TGG 0.276926 5_3:+51692636 Msa0816900:CDS
TGAAAGTATACTAGATGATT+TGG 0.279989 5_3:+51693956 Msa0816900:CDS
TAATCAATGTTAAGGCAAAA+AGG 0.284774 5_3:-51692507 None:intergenic
GGTTGGATAAGAATCTTATT+GGG 0.300177 5_3:+51693277 Msa0816900:CDS
TCAGAGCCTTCCACAGAAAC+TGG 0.302702 5_3:+51694212 Msa0816900:CDS
TTCCATGAATATTCTTGCTT+TGG 0.302888 5_3:+51692945 Msa0816900:CDS
CACAGTGGACTGCACAATAT+TGG 0.312544 5_3:-51694645 None:intergenic
AAATGGAAGCACCGCTTTAA+AGG 0.314011 5_3:+51688130 Msa0816900:CDS
TGAATTAAGCTCAACAATCT+AGG 0.314037 5_3:-51692571 None:intergenic
TGCAGAAATTGGTGCTGTTT+TGG 0.318204 5_3:+51687527 Msa0816900:CDS
CATTTATTCTCCTATTGTTT+CGG 0.322217 5_3:-51693605 None:intergenic
CTGCAATCAGAAACAATAAA+TGG 0.326125 5_3:-51693780 None:intergenic
GTTCTGTGTTCAGGTTCTTC+AGG 0.330319 5_3:+51693323 Msa0816900:CDS
ATCGGTCATGTTCTCTTTGT+AGG 0.334002 5_3:-51694732 None:intergenic
TGACTCTTCGGCCGCATCAT+TGG 0.334905 5_3:-51694192 None:intergenic
ACGCACAATCAATTGGAAAA+TGG 0.338282 5_3:+51692217 Msa0816900:CDS
CGAAACAATAGGAGAATAAA+TGG 0.340206 5_3:+51693606 Msa0816900:CDS
TGCTACATCGCTCACGATAT+TGG 0.342493 5_3:-51692290 None:intergenic
AATAGGTTTGCTAGGCAAAA+TGG 0.342774 5_3:+51687398 Msa0816900:intron
GATGTGCCATTCCCTTTCTT+AGG 0.354313 5_3:-51694515 None:intergenic
GACAGAGCAACACCAGTAAT+TGG 0.355570 5_3:-51687744 None:intergenic
GCATGGGATTCCCTGCTTGC+TGG 0.355590 5_3:+51692390 Msa0816900:CDS
CCTCTGCAACAACTCACTTT+TGG 0.356339 5_3:-51688024 None:intergenic
ATCCAAAGCAAGAATATTCA+TGG 0.356527 5_3:-51692947 None:intergenic
CCATGATGAGTTCTGTGTTC+AGG 0.366718 5_3:+51693314 Msa0816900:CDS
ATTTCACCGATCCAAATGAT+TGG 0.369521 5_3:+51693088 Msa0816900:CDS
AGAATATTCATGGAAGATAA+TGG 0.372261 5_3:-51692937 None:intergenic
ATAAATCCCGACGATCTCTT+TGG 0.384166 5_3:-51694293 None:intergenic
CTTTGGGGATCAAGTTTGTC+AGG 0.384675 5_3:-51693225 None:intergenic
TGCATGATCAATGCAGAAAT+TGG 0.392351 5_3:+51687516 Msa0816900:CDS
GAGGAGTCAATCTTAGCCTT+TGG 0.392489 5_3:+51694026 Msa0816900:CDS
CAACACGGGCATCAAGCTTC+AGG 0.395836 5_3:-51694781 None:intergenic
ACAAAAGGAACCCAATCATT+TGG 0.399519 5_3:-51693099 None:intergenic
GGAAGAACCTCCCAACTCTA+TGG 0.401170 5_3:-51692536 None:intergenic
TCATGCGAAGAAATGTTAGA+TGG 0.402752 5_3:+51687553 Msa0816900:CDS
CCATTCCCAGTTTCTGTGGA+AGG 0.403136 5_3:-51694218 None:intergenic
ATGAATATTCTTGCTTTGGA+TGG 0.404226 5_3:+51692949 Msa0816900:CDS
ATCTTAAAATTTCACAAGTT+AGG 0.405726 5_3:+51694149 Msa0816900:CDS
AACTGTTGGACCAGACAATA+TGG 0.407479 5_3:-51693829 None:intergenic
GATATGTTCTCCATATTGTC+TGG 0.409314 5_3:+51693819 Msa0816900:CDS
AAAGGTCTTCAGTTTCTTCA+AGG 0.411638 5_3:+51693189 Msa0816900:CDS
TTGTTTCCGTATAGTTCATC+AGG 0.411869 5_3:+51687995 Msa0816900:CDS
GAAACTGGTGCACCAATTAC+TGG 0.413722 5_3:+51687732 Msa0816900:CDS
CAAGCTTCAGGACAAGTTGC+AGG 0.415585 5_3:-51694769 None:intergenic
GGCTGAATTAATCAATGTTA+AGG 0.417470 5_3:-51692515 None:intergenic
TTACCGAGATCGTGAGAGTT+AGG 0.419522 5_3:-51686469 None:intergenic
AGATTTGAGGTGACGGATCC+AGG 0.421447 5_3:+51687864 Msa0816900:CDS
ACAAATTGAATGATATAGTT+CGG 0.421538 5_3:-51693658 None:intergenic
AACACCACTTCTTCGGATCC+TGG 0.421592 5_3:-51687882 None:intergenic
TTTCACCGATCCAAATGATT+GGG 0.422267 5_3:+51693089 Msa0816900:CDS
AGAATCCTTCCATACATGTT+TGG 0.423760 5_3:-51693899 None:intergenic
AGGTCTTCTTCCTGCTCAAA+TGG 0.424368 5_3:+51694169 Msa0816900:CDS
CTTCATCAACACCACTTCTT+CGG 0.428976 5_3:-51687889 None:intergenic
TAATTCTACGCACAATCAAT+TGG 0.434184 5_3:+51692210 Msa0816900:CDS
ATTAATTCAGCCATAGAGTT+GGG 0.434260 5_3:+51692526 Msa0816900:CDS
GTTGAATGTTGGTGAGCATA+TGG 0.434840 5_3:+51692438 Msa0816900:CDS
GTGAAATATTTCCAGCAAGC+AGG 0.436852 5_3:-51692401 None:intergenic
CACTGTGATGCCTTGTACAC+AGG 0.437775 5_3:+51694661 Msa0816900:CDS
AATGTAATCACCATACCTAT+TGG 0.448490 5_3:-51694096 None:intergenic
ATTATCAAATACCACAGAAA+TGG 0.448508 5_3:-51693856 None:intergenic
TTCACTATTGCCAATAGGTA+TGG 0.448850 5_3:+51694086 Msa0816900:CDS
TACCCGCCTGATGAACTATA+CGG 0.449862 5_3:-51688001 None:intergenic
TAGAATTGAACTTCTTTGGC+AGG 0.450905 5_3:+51694604 Msa0816900:CDS
GCATCATTGGCCATTTGAGC+AGG 0.451052 5_3:-51694179 None:intergenic
TTCAAGAAAAGATTGATGAT+TGG 0.453730 5_3:+51693138 Msa0816900:CDS
TTGGAGACTTTCAGACTGCC+TGG 0.458442 5_3:+51693405 Msa0816900:CDS
ATGAAAACACTGTCAATGTT+GGG 0.461056 5_3:+51687802 Msa0816900:CDS
TTTAGTCAACTCTTATACCT+TGG 0.463633 5_3:+51694323 Msa0816900:CDS
TGTTACAAGTTGCAGATTTG+AGG 0.464581 5_3:+51687851 Msa0816900:CDS
GATCGTCGGGATTTATCAGC+AGG 0.464762 5_3:+51694300 Msa0816900:CDS
TTTAATCGTGATACTAAGAA+AGG 0.464893 5_3:+51693171 Msa0816900:CDS
TGTGGAAGGCTCTGACTCTT+CGG 0.466462 5_3:-51694204 None:intergenic
ACGGAAACAAGTGTTTACTA+TGG 0.466567 5_3:-51687982 None:intergenic
AAGCAAATGCTCCTCATATC+AGG 0.468533 5_3:+51694852 Msa0816900:CDS
TGCTTTCTTCGACCAACAAA+AGG 0.468648 5_3:-51693114 None:intergenic
AGGCACTTGTTGACTTCTGC+AGG 0.471163 5_3:+51692800 Msa0816900:CDS
GTGATTCAATCTGATGAAAC+TGG 0.471281 5_3:+51687717 Msa0816900:CDS
CAGAAATGACCCCGAGTCGT+TGG 0.473110 5_3:+51693724 Msa0816900:CDS
TCGGTCATGTTCTCTTTGTA+GGG 0.473336 5_3:-51694731 None:intergenic
AATCTTATTGGGGATTACCT+TGG 0.474014 5_3:+51693288 Msa0816900:CDS
TATGTCGGATGATGATCAAT+TGG 0.474329 5_3:+51687587 Msa0816900:CDS
TGATGCCACAGAGCATGCTT+TGG 0.474758 5_3:+51688106 Msa0816900:CDS
GCTCTGTGGCATCAATGTCT+TGG 0.475279 5_3:-51688097 None:intergenic
AAAATGCTTCAAGCACCCTC+TGG 0.475715 5_3:-51693443 None:intergenic
TGGATCTTCTGTGATTCTCC+AGG 0.478989 5_3:-51693423 None:intergenic
CGATGTAGCAGCAGTTATAG+TGG 0.480334 5_3:+51692303 Msa0816900:CDS
TTATGTTCACTGTTGAATGT+TGG 0.480500 5_3:+51692427 Msa0816900:CDS
GACTTGCACAAAGCAAATAT+GGG 0.480511 5_3:+51692746 Msa0816900:CDS
GAGCAGCATCCTTGTTAGCT+AGG 0.481025 5_3:-51693497 None:intergenic
TGGGGCTTCATATCAACAAC+AGG 0.481678 5_3:+51692765 Msa0816900:CDS
GTTCACAGGAAATGCACTCT+TGG 0.483363 5_3:-51692911 None:intergenic
CTGTGGCATCAATGTCTTGG+AGG 0.484472 5_3:-51688094 None:intergenic
ATTGACTCCTCGGGAGATAA+CGG 0.488989 5_3:-51694014 None:intergenic
GACACTTCTGAATTGTTTGA+AGG 0.490729 5_3:-51694403 None:intergenic
TATGGTGATTACATTCGTAC+AGG 0.491126 5_3:+51694104 Msa0816900:CDS
GCCTTCTCTACCTGTGTACA+AGG 0.492725 5_3:-51694671 None:intergenic
GTGAGAGTTAGGTCAATAAT+CGG 0.494468 5_3:-51686458 None:intergenic
TTCTAGCTGGAACTTGAGTT+CGG 0.495179 5_3:-51692698 None:intergenic
AAACATCAAATAGGTTTGCT+AGG 0.500814 5_3:+51687390 Msa0816900:intron
AAAGGCTAAGATTGACTCCT+CGG 0.507561 5_3:-51694024 None:intergenic
CAATCTAGGGTGTCGGTGAA+AGG 0.509169 5_3:-51692557 None:intergenic
TGGAGAACATATCATAATCA+AGG 0.512501 5_3:-51693809 None:intergenic
AGTACTCCAAAGAGATCGTC+GGG 0.513187 5_3:+51694287 Msa0816900:CDS
AATGCAATGGAAGAGGAAGC+TGG 0.514610 5_3:+51687453 Msa0816900:CDS
TTTCAAATACACTACTGGGT+TGG 0.518384 5_3:+51693260 Msa0816900:CDS
AGAGGTGTACCAAACATGTA+TGG 0.521003 5_3:+51693890 Msa0816900:CDS
GATTGAATCACATCCAGAAA+AGG 0.522300 5_3:-51687705 None:intergenic
ACAGAAATGGCTGCAACTGT+TGG 0.523898 5_3:-51693843 None:intergenic
CTTCCACAGAAACTGGGAAT+GGG 0.524430 5_3:+51694219 Msa0816900:CDS
TGAGATAAATCCAACGACTC+GGG 0.526131 5_3:-51693734 None:intergenic
GATGAAAACACTGTCAATGT+TGG 0.526399 5_3:+51687801 Msa0816900:CDS
AGAGGACACAAAAGCAAGAA+TGG 0.526760 5_3:+51694049 Msa0816900:CDS
GAAGATAATGGACTGTTCAC+AGG 0.530703 5_3:-51692925 None:intergenic
GGAAAAGCAGAACCTTGCTC+AGG 0.531728 5_3:-51693702 None:intergenic
ATCTTTAAAGGCATTAAGGA+GGG 0.533690 5_3:+51687626 Msa0816900:CDS
GGTCTTATTGCTGTCATACA+AGG 0.535690 5_3:+51692970 Msa0816900:CDS
GAAGCTGGGCAGTGTGGTGT+TGG 0.538957 5_3:+51687468 Msa0816900:CDS
AAAGGCTGGAGATACAAGAC+AGG 0.539595 5_3:-51687687 None:intergenic
GCAAACTGATATCAATGCAA+TGG 0.539673 5_3:+51687440 Msa0816900:CDS
TGATATCAATGCAATGGAAG+AGG 0.539767 5_3:+51687446 Msa0816900:CDS
TGAAATATTTCCAGCAAGCA+GGG 0.540259 5_3:-51692400 None:intergenic
CAAGGAATGGCTGAAAGGAT+AGG 0.541272 5_3:+51692988 Msa0816900:CDS
GATTAATTCAGCCATAGAGT+TGG 0.541346 5_3:+51692525 Msa0816900:CDS
GAATTAAGCTCAACAATCTA+GGG 0.543725 5_3:-51692570 None:intergenic
CTTCCCATTCCCAGTTTCTG+TGG 0.545056 5_3:-51694222 None:intergenic
CATGCGAAGAAATGTTAGAT+GGG 0.546054 5_3:+51687554 Msa0816900:CDS
TATTGCTGTCATACAAGGAA+TGG 0.547312 5_3:+51692975 Msa0816900:CDS
GCAGCAAGTTGTTCTTCCGA+TGG 0.547365 5_3:-51694368 None:intergenic
TTACTATGGTGCAGATATGT+TGG 0.550226 5_3:-51687968 None:intergenic
CCTTCCACAGAAACTGGGAA+TGG 0.551634 5_3:+51694218 Msa0816900:CDS
GAAGTCAACAAGTGCCTCCA+TGG 0.551883 5_3:-51692794 None:intergenic
AGATACTTCAGTCTTCTGCC+TGG 0.556707 5_3:+51694547 Msa0816900:CDS
ATGCCTTTAAAGATTGAACA+AGG 0.558269 5_3:-51687617 None:intergenic
TACTTACCATAGAAAGTACA+AGG 0.558838 5_3:-51692642 None:intergenic
TACAGACCAGCACAATTCAC+AGG 0.561284 5_3:+51693551 Msa0816900:CDS
GTTAGGTCAATAATCGGAGC+TGG 0.561364 5_3:-51686452 None:intergenic
ATCTTGTCTCTTCAGCGCCA+AGG 0.561567 5_3:-51694340 None:intergenic
ACTTGAGTTCGGTACGAAGA+TGG 0.562573 5_3:-51692687 None:intergenic
CAGGAGTGAGACCTAAGAAA+GGG 0.563488 5_3:+51694504 Msa0816900:CDS
AAGGCTAAGATTGACTCCTC+GGG 0.564184 5_3:-51694023 None:intergenic
TTGAATGATATAGTTCGGAC+AGG 0.567612 5_3:-51693653 None:intergenic
GCCTTGTACACAGGTAGAGA+AGG 0.567796 5_3:+51694670 Msa0816900:CDS
CAGAGCCTTCCACAGAAACT+GGG 0.569050 5_3:+51694213 Msa0816900:CDS
AATCTTTAAAGGCATTAAGG+AGG 0.569085 5_3:+51687625 Msa0816900:CDS
ATTACATTCGTACAGGGTGG+AGG 0.569480 5_3:+51694111 Msa0816900:CDS
TGCCATGCACTTGGTAGTCG+AGG 0.569963 5_3:+51687827 Msa0816900:CDS
TGGCGGCAATGATCTACCTC+GGG 0.570038 5_3:+51693626 Msa0816900:CDS
TTATACCTCTTCCTTTAAAG+CGG 0.570308 5_3:-51688141 None:intergenic
ATGCAATGGAAGAGGAAGCT+GGG 0.570798 5_3:+51687454 Msa0816900:CDS
GAATCACATCCAGAAAAGGC+TGG 0.571485 5_3:-51687701 None:intergenic
TGACCTAACTCTCACGATCT+CGG 0.573129 5_3:+51686466 Msa0816900:five_prime_UTR
ACACTTCTGAATTGTTTGAA+GGG 0.574133 5_3:-51694402 None:intergenic
AAGCACCGCTTTAAAGGAAG+AGG 0.574276 5_3:+51688136 Msa0816900:CDS
GGATACAGATTGACTATCAC+TGG 0.574663 5_3:-51692254 None:intergenic
AGCTCAACAATCTAGGGTGT+CGG 0.575942 5_3:-51692564 None:intergenic
GCAGGAGTGAGACCTAAGAA+AGG 0.576612 5_3:+51694503 Msa0816900:CDS
TGCTCAAATGGCCAATGATG+CGG 0.578449 5_3:+51694181 Msa0816900:CDS
AACCTTGCTCAGGAGTTGTA+CGG 0.578907 5_3:-51693692 None:intergenic
TTGAATGTTGGTGAGCATAT+GGG 0.579968 5_3:+51692439 Msa0816900:CDS
ATGGGGTGTTCATTATATGT+CGG 0.579998 5_3:+51687572 Msa0816900:CDS
GTGAGACCTAAGAAAGGGAA+TGG 0.581909 5_3:+51694509 Msa0816900:CDS
AGGATTCTTAGCTGTTGCAA+AGG 0.581932 5_3:+51693914 Msa0816900:CDS
TTCCGTATAGTTCATCAGGC+GGG 0.583502 5_3:+51687999 Msa0816900:CDS
AGCTCATGAATGAACCGCAT+GGG 0.585693 5_3:+51692374 Msa0816900:CDS
GTTGGATAAGAATCTTATTG+GGG 0.587039 5_3:+51693278 Msa0816900:CDS
GTTAAAGCACTCAAAAGCGC+AGG 0.589195 5_3:+51694485 Msa0816900:CDS
CCTGAACACAGAACTCATCA+TGG 0.589419 5_3:-51693314 None:intergenic
AAGTTGCAGATTTGAGGTGA+CGG 0.589665 5_3:+51687857 Msa0816900:CDS
AGAACTCATCATGGTTTCCA+AGG 0.589874 5_3:-51693305 None:intergenic
AACAGTTGCAGCCATTTCTG+TGG 0.592387 5_3:+51693845 Msa0816900:CDS
ATGGCGGCAATGATCTACCT+CGG 0.593360 5_3:+51693625 Msa0816900:CDS
ATGAGATAAATCCAACGACT+CGG 0.595841 5_3:-51693735 None:intergenic
GAGAATCACAGAAGATCCAG+AGG 0.596515 5_3:+51693427 Msa0816900:CDS
TCAACAACAGGAAGTAGCCA+TGG 0.596595 5_3:+51692777 Msa0816900:CDS
GTGTACCAAACATGTATGGA+AGG 0.598579 5_3:+51693894 Msa0816900:CDS
TAGTACTCCAAAGAGATCGT+CGG 0.599351 5_3:+51694286 Msa0816900:CDS
TGTTGGGGATGCCATGCACT+TGG 0.600692 5_3:+51687818 Msa0816900:CDS
GAGGAGCATTTGCTTTCACA+AGG 0.601097 5_3:-51694844 None:intergenic
GGATCCAGGATCCGAAGAAG+TGG 0.601460 5_3:+51687878 Msa0816900:CDS
TCATACAAGGAATGGCTGAA+AGG 0.603397 5_3:+51692983 Msa0816900:CDS
ATACCTTAGCAGAACTTCTG+TGG 0.605980 5_3:+51687491 Msa0816900:CDS
CAGGGACCTCAAAAGTTCAT+CGG 0.606823 5_3:-51694750 None:intergenic
CACAGCTACGAGCAGTGGCA+AGG 0.609518 5_3:+51692333 Msa0816900:CDS
AGGAACCCAATCATTTGGAT+CGG 0.610103 5_3:-51693094 None:intergenic
CAGCTCATGAATGAACCGCA+TGG 0.610749 5_3:+51692373 Msa0816900:CDS
AATTCAGCCATAGAGTTGGG+AGG 0.612459 5_3:+51692529 Msa0816900:CDS
CATAGTATGTATCAGCAACA+CGG 0.613014 5_3:-51694796 None:intergenic
TCCTTGTTAGCTAGGATATG+CGG 0.613383 5_3:-51693489 None:intergenic
AAGCTTCAGGACAAGTTGCA+GGG 0.613756 5_3:-51694768 None:intergenic
TTTGGATCCGTTATCTCCCG+AGG 0.614457 5_3:+51694007 Msa0816900:CDS
ATCCGTACAACTCCTGAGCA+AGG 0.617302 5_3:+51693690 Msa0816900:CDS
TGCCTTTAAAGATTGAACAA+GGG 0.618992 5_3:-51687616 None:intergenic
CTTTGTAGGGAAGTAAGCGA+TGG 0.620214 5_3:-51694718 None:intergenic
ATGCCACAGAAGTTCTGCTA+AGG 0.620604 5_3:-51687494 None:intergenic
GCAAACACAGCTACGAGCAG+TGG 0.621199 5_3:+51692328 Msa0816900:CDS
GAAAGGGAATGGCACATCTG+AGG 0.623655 5_3:+51694520 Msa0816900:CDS
GTCAATCTTAGCCTTTGGAG+AGG 0.627624 5_3:+51694031 Msa0816900:CDS
TGATTGCTACAAGTAACTCC+AGG 0.629953 5_3:-51694565 None:intergenic
AGAGACAAGATCAGAACCAT+CGG 0.630116 5_3:+51694352 Msa0816900:CDS
TTTCCGTATAGTTCATCAGG+CGG 0.635714 5_3:+51687998 Msa0816900:CDS
TGATAATGCTGAAACTGAAG+AGG 0.640706 5_3:+51693872 Msa0816900:CDS
AATGCTATTGTGTTAGATCG+AGG 0.641941 5_3:-51692469 None:intergenic
ATAGTATGTATCAGCAACAC+GGG 0.642097 5_3:-51694795 None:intergenic
CCAAAAGTGAGTTGTTGCAG+AGG 0.648236 5_3:+51688024 Msa0816900:CDS
GATATTGGAAGCAATGTCTG+TGG 0.653604 5_3:-51692275 None:intergenic
GAGATAAATCCAACGACTCG+GGG 0.658050 5_3:-51693733 None:intergenic
AGCCTCGACTACCAAGTGCA+TGG 0.659150 5_3:-51687829 None:intergenic
TCTAAATCTTTACAACAACA+AGG 0.669029 5_3:-51686399 None:intergenic
ACTTGCACAAAGCAAATATG+GGG 0.673895 5_3:+51692747 Msa0816900:CDS
ATGCGAAGAAATGTTAGATG+GGG 0.674970 5_3:+51687555 Msa0816900:CDS
ACCGCATATCCTAGCTAACA+AGG 0.675835 5_3:+51693488 Msa0816900:CDS
TGAAAACACTGTCAATGTTG+GGG 0.679437 5_3:+51687803 Msa0816900:CDS
CTTACCATAGAAAGTACAAG+GGG 0.680198 5_3:-51692640 None:intergenic
ATGGTGATTACATTCGTACA+GGG 0.694920 5_3:+51694105 Msa0816900:CDS
GTGATTACATTCGTACAGGG+TGG 0.699278 5_3:+51694108 Msa0816900:CDS
AACAATAGGAGAATAAATGG+CGG 0.704111 5_3:+51693609 Msa0816900:CDS
ATACTATGAGCAGATTACAC+AGG 0.705359 5_3:+51694811 Msa0816900:CDS
ACTTACCATAGAAAGTACAA+GGG 0.706717 5_3:-51692641 None:intergenic
AGTTCGGACAGGACTTCCCG+AGG 0.709235 5_3:-51693642 None:intergenic
AGAATCACAGAAGATCCAGA+GGG 0.709247 5_3:+51693428 Msa0816900:CDS
AGCAAGCAGGGAATCCCATG+CGG 0.712908 5_3:-51692388 None:intergenic
ATTTACCAAAGCATGCTCTG+TGG 0.713335 5_3:-51688111 None:intergenic
ACAACAGGAAGTAGCCATGG+AGG 0.727176 5_3:+51692780 Msa0816900:CDS
GGAGGTGAGAGAAAATTGTG+CGG 0.730662 5_3:-51688076 None:intergenic
GAAGAGGAAGCTGGGCAGTG+TGG 0.741714 5_3:+51687462 Msa0816900:CDS
AAGGCTGGAGATACAAGACA+GGG 0.757007 5_3:-51687686 None:intergenic
CTGTGTACAAGGCATCACAG+TGG 0.760331 5_3:-51694660 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATCTTTATATTAAAAAATG+TGG - chr5_3:51686539-51686558 None:intergenic 10.0%
!! TAATTTCCATTATTTATTAT+CGG + chr5_3:51688421-51688440 Msa0816900:intron 10.0%
!!! TTTGTATTTTAATACAAAAA+AGG - chr5_3:51690484-51690503 None:intergenic 10.0%
!!! TTTGTATTTTAATACAAAAA+AGG - chr5_3:51690484-51690503 None:intergenic 10.0%
!!! TTTCATAGATTTTATATTTA+GGG - chr5_3:51691410-51691429 None:intergenic 10.0%
!!! TTTTCATAGATTTTATATTT+AGG - chr5_3:51691411-51691430 None:intergenic 10.0%
!!! ATAAACTGTTTATTTTTATA+CGG + chr5_3:51691570-51691589 Msa0816900:intron 10.0%
!!! ATTTTGAGTTTAATTTGAAA+CGG + chr5_3:51686645-51686664 Msa0816900:intron 15.0%
!!! TTTTTTGATTCTAGATTTAA+GGG + chr5_3:51686736-51686755 Msa0816900:intron 15.0%
!!! CATCTATTATGTATTTTTTA+AGG - chr5_3:51690062-51690081 None:intergenic 15.0%
!!! TCAAAAATTTCATTTTTAGT+AGG - chr5_3:51690872-51690891 None:intergenic 15.0%
!! CATAATAATAAAACTAAATG+AGG + chr5_3:51691118-51691137 Msa0816900:intron 15.0%
!!! AATTTCTTTTGAATAAAAGA+AGG + chr5_3:51691276-51691295 Msa0816900:intron 15.0%
!!! ATTTCTTTTGAATAAAAGAA+GGG + chr5_3:51691277-51691296 Msa0816900:intron 15.0%
!!! TAAAATTCGTTTTATAATGT+CGG - chr5_3:51691803-51691822 None:intergenic 15.0%
!!! TTTTGAGTTTAATTTGAAAC+GGG + chr5_3:51686646-51686665 Msa0816900:intron 20.0%
!!! GTTTTTTGATTCTAGATTTA+AGG + chr5_3:51686735-51686754 Msa0816900:intron 20.0%
!!! GATTTTGATATGTTTATGTA+TGG + chr5_3:51686933-51686952 Msa0816900:intron 20.0%
!!! TATGTTTATGTATGGTTTTA+AGG + chr5_3:51686941-51686960 Msa0816900:intron 20.0%
!! TACACAATTAGTATAAAGTA+TGG - chr5_3:51687046-51687065 None:intergenic 20.0%
!!! ATTTTAAACTTTGTTGAGAT+TGG + chr5_3:51687248-51687267 Msa0816900:intron 20.0%
!!! TTCATTTCTGAAAATTCTAT+TGG + chr5_3:51687366-51687385 Msa0816900:intron 20.0%
!!! TGTTTACAAGATTTTAACTT+TGG + chr5_3:51687770-51687789 Msa0816900:CDS 20.0%
!! AATGTAAGAAGAGAAAAATA+TGG - chr5_3:51688378-51688397 None:intergenic 20.0%
!!! TTTTGTCCGATAATAAATAA+TGG - chr5_3:51688430-51688449 None:intergenic 20.0%
!! CTTAAGTTTGAAGAAAATTA+TGG - chr5_3:51688542-51688561 None:intergenic 20.0%
!! AATAATAAAGGACAAAACTT+AGG - chr5_3:51688607-51688626 None:intergenic 20.0%
!!! TCAGATAATATAGTTTTAGT+TGG + chr5_3:51688943-51688962 Msa0816900:intron 20.0%
!! AATCAAGAGAAAAAGTAAAT+AGG + chr5_3:51688967-51688986 Msa0816900:intron 20.0%
!! TAAATAGGAAGTTAAAGATA+TGG + chr5_3:51688982-51689001 Msa0816900:intron 20.0%
!! AAATAGGAAGTTAAAGATAT+GGG + chr5_3:51688983-51689002 Msa0816900:intron 20.0%
!! AAAAGAGGTAGAAAATAAAA+AGG - chr5_3:51689782-51689801 None:intergenic 20.0%
!!! TTTATTTTCTACCTCTTTTT+TGG + chr5_3:51689783-51689802 Msa0816900:intron 20.0%
!!! TTATTTTCTACCTCTTTTTT+GGG + chr5_3:51689784-51689803 Msa0816900:intron 20.0%
!! TAATTAATAAAGAAACTCAC+AGG - chr5_3:51689975-51689994 None:intergenic 20.0%
!!! ATCCAAGAATTTTTTTATGA+GGG + chr5_3:51690347-51690366 Msa0816900:intron 20.0%
!!! AAATGAAATTTTTGAGACTT+TGG + chr5_3:51690877-51690896 Msa0816900:intron 20.0%
!!! AATGAAATTTTTGAGACTTT+GGG + chr5_3:51690878-51690897 Msa0816900:intron 20.0%
!! GTAAAAATGCTACATATTAA+GGG - chr5_3:51691082-51691101 None:intergenic 20.0%
!!! AGATTTTGAGTAAATTAACA+AGG + chr5_3:51691178-51691197 Msa0816900:intron 20.0%
!!! GATTTTGAGTAAATTAACAA+GGG + chr5_3:51691179-51691198 Msa0816900:intron 20.0%
!!! ATTTTGAGTAAATTAACAAG+GGG + chr5_3:51691180-51691199 Msa0816900:intron 20.0%
!!! TTTCTTTTGAATAAAAGAAG+GGG + chr5_3:51691278-51691297 Msa0816900:intron 20.0%
!!! ATGTTATGTTGACAATTTTT+TGG + chr5_3:51691459-51691478 Msa0816900:intron 20.0%
!! AAAATGAAACAGTACTTATA+CGG - chr5_3:51691506-51691525 None:intergenic 20.0%
!!! TTATTTTTTTGACAGATTGA+TGG + chr5_3:51692172-51692191 Msa0816900:intron 20.0%
!!! TATTTTTTTGACAGATTGAT+GGG + chr5_3:51692173-51692192 Msa0816900:intron 20.0%
!!! AACATTTGATTTTAAAGACA+TGG + chr5_3:51693356-51693375 Msa0816900:CDS 20.0%
!! ACAAATTGAATGATATAGTT+CGG - chr5_3:51693661-51693680 None:intergenic 20.0%
!! ATCTTAAAATTTCACAAGTT+AGG + chr5_3:51694149-51694168 Msa0816900:CDS 20.0%
! TCTAAATCTTTACAACAACA+AGG - chr5_3:51686402-51686421 None:intergenic 25.0%
! ATATGGATTTGATCAAAAAG+TGG + chr5_3:51686712-51686731 Msa0816900:intron 25.0%
! TATGGATTTGATCAAAAAGT+GGG + chr5_3:51686713-51686732 Msa0816900:intron 25.0%
!!! AAATTGAGGGTTTTTATTTG+AGG + chr5_3:51686786-51686805 Msa0816900:intron 25.0%
! TCTATTGGTAAACATCAAAT+AGG + chr5_3:51687381-51687400 Msa0816900:intron 25.0%
!!! TTCAATCTTTAAAGGCATTA+AGG + chr5_3:51687622-51687641 Msa0816900:CDS 25.0%
! ACTTGATTATGAGGAATAAT+AGG + chr5_3:51688247-51688266 Msa0816900:intron 25.0%
! CTTGATTATGAGGAATAATA+GGG + chr5_3:51688248-51688267 Msa0816900:intron 25.0%
! TTTATTATCGGACAAAACTT+AGG + chr5_3:51688433-51688452 Msa0816900:intron 25.0%
! ACAAACGTTGAGAAAATTAT+GGG - chr5_3:51688514-51688533 None:intergenic 25.0%
! AACAAACGTTGAGAAAATTA+TGG - chr5_3:51688515-51688534 None:intergenic 25.0%
! AATTTGTAGGGGAATAATAA+AGG - chr5_3:51688619-51688638 None:intergenic 25.0%
!! AGGAAAGAAGGAAATATTTT+GGG + chr5_3:51688849-51688868 Msa0816900:intron 25.0%
! CTATATTATCTGAAGAAAGA+AGG - chr5_3:51688936-51688955 None:intergenic 25.0%
! AATAGGAAGTTAAAGATATG+GGG + chr5_3:51688984-51689003 Msa0816900:intron 25.0%
! CTAAAATACAAGAATGCTTT+AGG + chr5_3:51689165-51689184 Msa0816900:intron 25.0%
! AGGTAGAAAATAAAAAGGTT+GGG - chr5_3:51689777-51689796 None:intergenic 25.0%
!! TACTTTAATTTAAGCCTTAG+AGG + chr5_3:51689890-51689909 Msa0816900:intron 25.0%
!!! GATCCAAGAATTTTTTTATG+AGG + chr5_3:51690346-51690365 Msa0816900:intron 25.0%
!!! TCCAAGAATTTTTTTATGAG+GGG + chr5_3:51690348-51690367 Msa0816900:intron 25.0%
! ATACAAAAAATACTGCTGAT+AGG + chr5_3:51690497-51690516 Msa0816900:intron 25.0%
!!! ATGAAATTTTTGAGACTTTG+GGG + chr5_3:51690879-51690898 Msa0816900:intron 25.0%
! ATTAACTAAGTCTCTTCTAA+TGG - chr5_3:51690989-51691008 None:intergenic 25.0%
! GGTAAAAATGCTACATATTA+AGG - chr5_3:51691083-51691102 None:intergenic 25.0%
!! ATTTTTACCCCTTTTAAACT+TGG + chr5_3:51691094-51691113 Msa0816900:intron 25.0%
!! TTTTTACCCCTTTTAAACTT+GGG + chr5_3:51691095-51691114 Msa0816900:intron 25.0%
! TATTATGCCCAAGTTTAAAA+GGG - chr5_3:51691105-51691124 None:intergenic 25.0%
! TTATTATGCCCAAGTTTAAA+AGG - chr5_3:51691106-51691125 None:intergenic 25.0%
!!! TTTTGAGTAAATTAACAAGG+GGG + chr5_3:51691181-51691200 Msa0816900:intron 25.0%
!!! TTCAAAAGAAATTGCTTTTC+CGG - chr5_3:51691269-51691288 None:intergenic 25.0%
!! TGAGTACTTAGGAAATTTTA+GGG - chr5_3:51691380-51691399 None:intergenic 25.0%
!! TTGAGTACTTAGGAAATTTT+AGG - chr5_3:51691381-51691400 None:intergenic 25.0%
! ATTGTCAACATAACATTTCT+AGG - chr5_3:51691455-51691474 None:intergenic 25.0%
! GTACTTATACGGTATATATA+CGG - chr5_3:51691495-51691514 None:intergenic 25.0%
!! AAAAACATTAAAGGTGTGTT+TGG + chr5_3:51691712-51691731 Msa0816900:intron 25.0%
! AACTAACAATTACTCTCTTT+GGG - chr5_3:51691977-51691996 None:intergenic 25.0%
!! TTAATGCTGCAAATTTTCAA+AGG + chr5_3:51692051-51692070 Msa0816900:intron 25.0%
!! TAATGCTGCAAATTTTCAAA+GGG + chr5_3:51692052-51692071 Msa0816900:intron 25.0%
! AATCAATGTTAAGGCAAAAA+GGG - chr5_3:51692509-51692528 None:intergenic 25.0%
! TAATCAATGTTAAGGCAAAA+AGG - chr5_3:51692510-51692529 None:intergenic 25.0%
! AGAATATTCATGGAAGATAA+TGG - chr5_3:51692940-51692959 None:intergenic 25.0%
!! TTCAAGAAAAGATTGATGAT+TGG + chr5_3:51693138-51693157 Msa0816900:CDS 25.0%
! TTTAATCGTGATACTAAGAA+AGG + chr5_3:51693171-51693190 Msa0816900:CDS 25.0%
! AGTAGTGTATTTGAAAAAGA+AGG - chr5_3:51693256-51693275 None:intergenic 25.0%
!!! TTCTTTTTCAAATACACTAC+TGG + chr5_3:51693255-51693274 Msa0816900:CDS 25.0%
!!! TCTTTTTCAAATACACTACT+GGG + chr5_3:51693256-51693275 Msa0816900:CDS 25.0%
! CATTTATTCTCCTATTGTTT+CGG - chr5_3:51693608-51693627 None:intergenic 25.0%
! ATTATCAAATACCACAGAAA+TGG - chr5_3:51693859-51693878 None:intergenic 25.0%
!! TGAAAGTATACTAGATGATT+TGG + chr5_3:51693956-51693975 Msa0816900:CDS 25.0%
!!! TTGCAAGTTTGTTACTATTT+TGG + chr5_3:51693989-51694008 Msa0816900:CDS 25.0%
GTTGTTACTGTGTAATGATA+TGG + chr5_3:51686695-51686714 Msa0816900:intron 30.0%
! TTTATTTGAGGTTTGAGCTT+TGG + chr5_3:51686798-51686817 Msa0816900:intron 30.0%
! TAGTTGATGCTTTGACAATT+TGG + chr5_3:51686888-51686907 Msa0816900:intron 30.0%
! TAGACAACTATTTTCTGCAT+TGG - chr5_3:51687007-51687026 None:intergenic 30.0%
!! TTATGCTTTACTTTGACTTG+TGG + chr5_3:51687284-51687303 Msa0816900:intron 30.0%
AAGGATAAGCAATGTTGAAT+CGG - chr5_3:51687337-51687356 None:intergenic 30.0%
ATTCAACATTGCTTATCCTT+GGG + chr5_3:51687337-51687356 Msa0816900:intron 30.0%
! AAACATCAAATAGGTTTGCT+AGG + chr5_3:51687390-51687409 Msa0816900:intron 30.0%
TTCCCTTGTTCAATCTTTAA+AGG + chr5_3:51687614-51687633 Msa0816900:CDS 30.0%
! TGCCTTTAAAGATTGAACAA+GGG - chr5_3:51687619-51687638 None:intergenic 30.0%
! ATGCCTTTAAAGATTGAACA+AGG - chr5_3:51687620-51687639 None:intergenic 30.0%
!! AATCTTTAAAGGCATTAAGG+AGG + chr5_3:51687625-51687644 Msa0816900:CDS 30.0%
!! ATCTTTAAAGGCATTAAGGA+GGG + chr5_3:51687626-51687645 Msa0816900:CDS 30.0%
!!! TAAGGAGGGAAATTTTTTCT+TGG + chr5_3:51687640-51687659 Msa0816900:CDS 30.0%
ATGAAAACACTGTCAATGTT+GGG + chr5_3:51687802-51687821 Msa0816900:CDS 30.0%
! TTATACCTCTTCCTTTAAAG+CGG - chr5_3:51688144-51688163 None:intergenic 30.0%
AAACTTAGGTGCATTTCTTT+AGG + chr5_3:51688447-51688466 Msa0816900:intron 30.0%
!! AAGTGTATTTTGAGAAAAGC+AGG + chr5_3:51688559-51688578 Msa0816900:intron 30.0%
AACTTAGGTTCCTTTATCTT+AGG - chr5_3:51688592-51688611 None:intergenic 30.0%
! AAATTGTGTGGTGGTATTTT+TGG + chr5_3:51688634-51688653 Msa0816900:intron 30.0%
! TTTTAGATCAAGTCCTTGAA+AGG + chr5_3:51688799-51688818 Msa0816900:intron 30.0%
AATCTACCTAAAACCTTTCA+AGG - chr5_3:51688815-51688834 None:intergenic 30.0%
CAAAATATTTCCTTCTTTCC+TGG - chr5_3:51688850-51688869 None:intergenic 30.0%
! CAGGAAAGAAGGAAATATTT+TGG + chr5_3:51688848-51688867 Msa0816900:intron 30.0%
AATCATCAGAGAGAAAATTG+TGG + chr5_3:51689383-51689402 Msa0816900:intron 30.0%
ATTTAGTCAAGTTAGGAGTT+AGG + chr5_3:51689449-51689468 Msa0816900:intron 30.0%
ACTTTAGTATAGTGGTTTAG+AGG + chr5_3:51689501-51689520 Msa0816900:intron 30.0%
ATGGTACTTTCTTTCAACAA+GGG - chr5_3:51689697-51689716 None:intergenic 30.0%
GGTAGAAAATAAAAAGGTTG+GGG - chr5_3:51689776-51689795 None:intergenic 30.0%
GAGGTAGAAAATAAAAAGGT+TGG - chr5_3:51689778-51689797 None:intergenic 30.0%
ACAGCTAATTAAACTTTGGA+TGG - chr5_3:51689820-51689839 None:intergenic 30.0%
AAGCACAGCTAATTAAACTT+TGG - chr5_3:51689824-51689843 None:intergenic 30.0%
TTGAATTCCTTGACTTATGT+TGG + chr5_3:51689923-51689942 Msa0816900:intron 30.0%
GTAAATACCAACATAAGTCA+AGG - chr5_3:51689933-51689952 None:intergenic 30.0%
AAAGAAACTCACAGGTATTA+AGG - chr5_3:51689967-51689986 None:intergenic 30.0%
! TATCCTGCTATAGTGTTTTT+GGG + chr5_3:51690098-51690117 Msa0816900:intron 30.0%
ACTGTGGTTATAAACTCTAA+TGG - chr5_3:51690132-51690151 None:intergenic 30.0%
TTAGCAGTGTTGTCAAATAT+TGG + chr5_3:51690215-51690234 Msa0816900:intron 30.0%
!!! CCAAGAATTTTTTTATGAGG+GGG + chr5_3:51690349-51690368 Msa0816900:intron 30.0%
TGTACATTCTACTACTTGAT+TGG + chr5_3:51691019-51691038 Msa0816900:intron 30.0%
ATTATGCCCAAGTTTAAAAG+GGG - chr5_3:51691104-51691123 None:intergenic 30.0%
CATCGTTAAATCTTTCACAA+TGG - chr5_3:51691208-51691227 None:intergenic 30.0%
TGAAAGATTTAACGATGAGT+AGG + chr5_3:51691211-51691230 Msa0816900:intron 30.0%
GAAAGATTTAACGATGAGTA+GGG + chr5_3:51691212-51691231 Msa0816900:intron 30.0%
! TTTTCGTTCTTGCAAAAAAC+CGG + chr5_3:51691247-51691266 Msa0816900:intron 30.0%
! TAGGTCTCTTATCATTTTCA+TGG - chr5_3:51691436-51691455 None:intergenic 30.0%
! TTAATGTTTTTCCCCATTCA+TGG - chr5_3:51691703-51691722 None:intergenic 30.0%
TGAATGGGGAAAAACATTAA+AGG + chr5_3:51691703-51691722 Msa0816900:intron 30.0%
ACTAACAATTACTCTCTTTG+GGG - chr5_3:51691976-51691995 None:intergenic 30.0%
GAACTAACAATTACTCTCTT+TGG - chr5_3:51691978-51691997 None:intergenic 30.0%
TAATTCTACGCACAATCAAT+TGG + chr5_3:51692210-51692229 Msa0816900:CDS 30.0%
TTATGTTCACTGTTGAATGT+TGG + chr5_3:51692427-51692446 Msa0816900:CDS 30.0%
ATCAATGTTAAGGCAAAAAG+GGG - chr5_3:51692508-51692527 None:intergenic 30.0%
GGCTGAATTAATCAATGTTA+AGG - chr5_3:51692518-51692537 None:intergenic 30.0%
ATTAATTCAGCCATAGAGTT+GGG + chr5_3:51692526-51692545 Msa0816900:CDS 30.0%
GAATTAAGCTCAACAATCTA+GGG - chr5_3:51692573-51692592 None:intergenic 30.0%
TGAATTAAGCTCAACAATCT+AGG - chr5_3:51692574-51692593 None:intergenic 30.0%
TAGATTGTTGAGCTTAATTC+AGG + chr5_3:51692573-51692592 Msa0816900:CDS 30.0%
TTCTGCAATCTTATGCAATT+TGG + chr5_3:51692604-51692623 Msa0816900:CDS 30.0%
! ACTTACCATAGAAAGTACAA+GGG - chr5_3:51692644-51692663 None:intergenic 30.0%
! TACTTACCATAGAAAGTACA+AGG - chr5_3:51692645-51692664 None:intergenic 30.0%
AAGAAAAAAATGCTTCTAGC+TGG - chr5_3:51692714-51692733 None:intergenic 30.0%
TTCCATGAATATTCTTGCTT+TGG + chr5_3:51692945-51692964 Msa0816900:CDS 30.0%
ATCCAAAGCAAGAATATTCA+TGG - chr5_3:51692950-51692969 None:intergenic 30.0%
! ATGAATATTCTTGCTTTGGA+TGG + chr5_3:51692949-51692968 Msa0816900:CDS 30.0%
!! TTGAAGAGTATACACCATTT+TGG + chr5_3:51693049-51693068 Msa0816900:CDS 30.0%
GGTTGGATAAGAATCTTATT+GGG + chr5_3:51693277-51693296 Msa0816900:CDS 30.0%
GTTGGATAAGAATCTTATTG+GGG + chr5_3:51693278-51693297 Msa0816900:CDS 30.0%
! AAGATTTTGTCCGAAACAAT+AGG + chr5_3:51693595-51693614 Msa0816900:CDS 30.0%
CGAAACAATAGGAGAATAAA+TGG + chr5_3:51693606-51693625 Msa0816900:CDS 30.0%
AACAATAGGAGAATAAATGG+CGG + chr5_3:51693609-51693628 Msa0816900:CDS 30.0%
CTGCAATCAGAAACAATAAA+TGG - chr5_3:51693783-51693802 None:intergenic 30.0%
TGGAGAACATATCATAATCA+AGG - chr5_3:51693812-51693831 None:intergenic 30.0%
AATGTAATCACCATACCTAT+TGG - chr5_3:51694099-51694118 None:intergenic 30.0%
TTTAGTCAACTCTTATACCT+TGG + chr5_3:51694323-51694342 Msa0816900:CDS 30.0%
ACACTTCTGAATTGTTTGAA+GGG - chr5_3:51694405-51694424 None:intergenic 30.0%
GAGATAGAATTGAACTTCTT+TGG + chr5_3:51694600-51694619 Msa0816900:CDS 30.0%
TTGTCGTGTGTGTAAAAAAG+AGG + chr5_3:51686374-51686393 Msa0816900:five_prime_UTR 35.0%
GTGAGAGTTAGGTCAATAAT+CGG - chr5_3:51686461-51686480 None:intergenic 35.0%
GTTGAAGATGAAGAAGAAGA+GGG - chr5_3:51686499-51686518 None:intergenic 35.0%
AGTTGAAGATGAAGAAGAAG+AGG - chr5_3:51686500-51686519 None:intergenic 35.0%
!!! GTTTTTTTTCGTGTGAGTGT+TGG + chr5_3:51686580-51686599 Msa0816900:intron 35.0%
! TCTAGATTTAAGGGTCTTGT+AGG + chr5_3:51686745-51686764 Msa0816900:intron 35.0%
! CTAGATTTAAGGGTCTTGTA+GGG + chr5_3:51686746-51686765 Msa0816900:intron 35.0%
TTCTGGGTGAAGTTAAATTG+AGG + chr5_3:51686772-51686791 Msa0816900:intron 35.0%
TCTGGGTGAAGTTAAATTGA+GGG + chr5_3:51686773-51686792 Msa0816900:intron 35.0%
!! TTGGAAAGTTGATGTAGTGT+TGG + chr5_3:51686907-51686926 Msa0816900:intron 35.0%
! GTTGAGATTGGAATTTTGTG+TGG + chr5_3:51687260-51687279 Msa0816900:intron 35.0%
GATTCAACATTGCTTATCCT+TGG + chr5_3:51687336-51687355 Msa0816900:intron 35.0%
!! AATAGGTTTGCTAGGCAAAA+TGG + chr5_3:51687398-51687417 Msa0816900:intron 35.0%
GCAAACTGATATCAATGCAA+TGG + chr5_3:51687440-51687459 Msa0816900:CDS 35.0%
TGATATCAATGCAATGGAAG+AGG + chr5_3:51687446-51687465 Msa0816900:CDS 35.0%
TGCATGATCAATGCAGAAAT+TGG + chr5_3:51687516-51687535 Msa0816900:CDS 35.0%
TCATGCGAAGAAATGTTAGA+TGG + chr5_3:51687553-51687572 Msa0816900:CDS 35.0%
CATGCGAAGAAATGTTAGAT+GGG + chr5_3:51687554-51687573 Msa0816900:CDS 35.0%
ATGCGAAGAAATGTTAGATG+GGG + chr5_3:51687555-51687574 Msa0816900:CDS 35.0%
! ATGGGGTGTTCATTATATGT+CGG + chr5_3:51687572-51687591 Msa0816900:CDS 35.0%
TATGTCGGATGATGATCAAT+TGG + chr5_3:51687587-51687606 Msa0816900:CDS 35.0%
GATTGAATCACATCCAGAAA+AGG - chr5_3:51687708-51687727 None:intergenic 35.0%
GTGATTCAATCTGATGAAAC+TGG + chr5_3:51687717-51687736 Msa0816900:CDS 35.0%
GATGAAAACACTGTCAATGT+TGG + chr5_3:51687801-51687820 Msa0816900:CDS 35.0%
TGAAAACACTGTCAATGTTG+GGG + chr5_3:51687803-51687822 Msa0816900:CDS 35.0%
TGTTACAAGTTGCAGATTTG+AGG + chr5_3:51687851-51687870 Msa0816900:CDS 35.0%
TTACTATGGTGCAGATATGT+TGG - chr5_3:51687971-51687990 None:intergenic 35.0%
ACGGAAACAAGTGTTTACTA+TGG - chr5_3:51687985-51688004 None:intergenic 35.0%
TTGTTTCCGTATAGTTCATC+AGG + chr5_3:51687995-51688014 Msa0816900:CDS 35.0%
GAAGATGATTGCAAGAAACA+GGG - chr5_3:51688184-51688203 None:intergenic 35.0%
AGAAGATGATTGCAAGAAAC+AGG - chr5_3:51688185-51688204 None:intergenic 35.0%
AATAATAGGGACCTTAGTGT+GGG + chr5_3:51688261-51688280 Msa0816900:intron 35.0%
AGGAAAAGCTCCTAAGATAA+AGG + chr5_3:51688579-51688598 Msa0816900:intron 35.0%
TTATTCCCCTACAAATTGTG+TGG + chr5_3:51688622-51688641 Msa0816900:intron 35.0%
ATACCACCACACAATTTGTA+GGG - chr5_3:51688631-51688650 None:intergenic 35.0%
AATACCACCACACAATTTGT+AGG - chr5_3:51688632-51688651 None:intergenic 35.0%
GTCTCATTCCTACATTTGAA+GGG - chr5_3:51688762-51688781 None:intergenic 35.0%
AGTCTCATTCCTACATTTGA+AGG - chr5_3:51688763-51688782 None:intergenic 35.0%
! TCAAGTCCTTGAAAGGTTTT+AGG + chr5_3:51688806-51688825 Msa0816900:intron 35.0%
TAGATTCTCTAGATCATACC+AGG + chr5_3:51688829-51688848 Msa0816900:intron 35.0%
AGCTTAGAGGAAAAAAGTTG+TGG + chr5_3:51689076-51689095 Msa0816900:intron 35.0%
CAAACCATAGGATATAGACA+AGG + chr5_3:51689138-51689157 Msa0816900:intron 35.0%
ACACAGATAGAATGGTATGA+TGG + chr5_3:51689324-51689343 Msa0816900:intron 35.0%
!! AGAATGGTATGATGGATTAG+TGG + chr5_3:51689332-51689351 Msa0816900:intron 35.0%
TTGGGTGATTTAGTCAAGTT+AGG + chr5_3:51689442-51689461 Msa0816900:intron 35.0%
TTATCAAGAGCTCGCTATAA+TGG + chr5_3:51689472-51689491 Msa0816900:intron 35.0%
GGTTGAAGACTTTAGTATAG+TGG + chr5_3:51689493-51689512 Msa0816900:intron 35.0%
CATGGTACTTTCTTTCAACA+AGG - chr5_3:51689698-51689717 None:intergenic 35.0%
GCTAATTAAACTTTGGATGG+TGG - chr5_3:51689817-51689836 None:intergenic 35.0%
TCAACAAGTTTAAGCCTCTA+AGG - chr5_3:51689907-51689926 None:intergenic 35.0%
! CTATCCTGCTATAGTGTTTT+TGG + chr5_3:51690097-51690116 Msa0816900:intron 35.0%
!! ATCCTGCTATAGTGTTTTTG+GGG + chr5_3:51690099-51690118 Msa0816900:intron 35.0%
GTGGTTATAAACTCTAATGG+TGG - chr5_3:51690129-51690148 None:intergenic 35.0%
TGACAACACTGCTAACTATT+TGG - chr5_3:51690210-51690229 None:intergenic 35.0%
! GCCAATTTTGTTAAGGATAG+CGG + chr5_3:51690250-51690269 Msa0816900:intron 35.0%
CCCCCTCATAAAAAAATTCT+TGG - chr5_3:51690352-51690371 None:intergenic 35.0%
ATGAAAATGCGTATTTGGGT+TGG - chr5_3:51690459-51690478 None:intergenic 35.0%
! AACCCAAATACGCATTTTCA+TGG + chr5_3:51690458-51690477 Msa0816900:intron 35.0%
! ACACACGACCTAATTTTATG+AGG + chr5_3:51690546-51690565 Msa0816900:intron 35.0%
! CACACGACCTAATTTTATGA+GGG + chr5_3:51690547-51690566 Msa0816900:intron 35.0%
! ACACGACCTAATTTTATGAG+GGG + chr5_3:51690548-51690567 Msa0816900:intron 35.0%
ATGAAAATGCGTATTTGGGT+TGG - chr5_3:51690459-51690478 None:intergenic 35.0%
! AACCCAAATACGCATTTTCA+TGG + chr5_3:51690458-51690477 Msa0816900:intron 35.0%
ACCTAAAAATGACCAAACTG+AGG + chr5_3:51690718-51690737 Msa0816900:intron 35.0%
!!! TCCTCAGTTTGGTCATTTTT+AGG - chr5_3:51690522-51690541 None:intergenic 35.0%
GCAACTCACATATAAGCTTT+AGG - chr5_3:51690757-51690776 None:intergenic 35.0%
AAGCTTATATGTGAGTTGCA+TGG + chr5_3:51690758-51690777 Msa0816900:intron 35.0%
CATATCCTTCATATGTAGTC+CGG - chr5_3:51690792-51690811 None:intergenic 35.0%
!!! AAATTTTTGAGACTTTGGGG+AGG + chr5_3:51690882-51690901 Msa0816900:intron 35.0%
TTAATACCTCCTCACCTTTA+AGG + chr5_3:51691301-51691320 Msa0816900:intron 35.0%
AGGGATTCTATTGAGTACTT+AGG - chr5_3:51691391-51691410 None:intergenic 35.0%
ATACGGTATATATACGGTGT+TGG - chr5_3:51691489-51691508 None:intergenic 35.0%
! ACATTAAAGGTGTGTTTGGA+TGG + chr5_3:51691716-51691735 Msa0816900:intron 35.0%
AGTTCGTGTATGTAAGTAAG+AGG + chr5_3:51691993-51692012 Msa0816900:intron 35.0%
ACGCACAATCAATTGGAAAA+TGG + chr5_3:51692217-51692236 Msa0816900:CDS 35.0%
TGAAATATTTCCAGCAAGCA+GGG - chr5_3:51692403-51692422 None:intergenic 35.0%
! TTGAATGTTGGTGAGCATAT+GGG + chr5_3:51692439-51692458 Msa0816900:CDS 35.0%
AATGCTATTGTGTTAGATCG+AGG - chr5_3:51692472-51692491 None:intergenic 35.0%
GATTAATTCAGCCATAGAGT+TGG + chr5_3:51692525-51692544 Msa0816900:CDS 35.0%
! CTTACCATAGAAAGTACAAG+GGG - chr5_3:51692643-51692662 None:intergenic 35.0%
AGACTTGCACAAAGCAAATA+TGG + chr5_3:51692745-51692764 Msa0816900:CDS 35.0%
GACTTGCACAAAGCAAATAT+GGG + chr5_3:51692746-51692765 Msa0816900:CDS 35.0%
ACTTGCACAAAGCAAATATG+GGG + chr5_3:51692747-51692766 Msa0816900:CDS 35.0%
TATTGCTGTCATACAAGGAA+TGG + chr5_3:51692975-51692994 Msa0816900:CDS 35.0%
!! TCACACTTTTCAAGCCAAAA+TGG - chr5_3:51693066-51693085 None:intergenic 35.0%
ATTTCACCGATCCAAATGAT+TGG + chr5_3:51693088-51693107 Msa0816900:CDS 35.0%
TTTCACCGATCCAAATGATT+GGG + chr5_3:51693089-51693108 Msa0816900:CDS 35.0%
ACAAAAGGAACCCAATCATT+TGG - chr5_3:51693102-51693121 None:intergenic 35.0%
! AATGATTGGGTTCCTTTTGT+TGG + chr5_3:51693102-51693121 Msa0816900:CDS 35.0%
AAAGGTCTTCAGTTTCTTCA+AGG + chr5_3:51693189-51693208 Msa0816900:CDS 35.0%
AAAAAGAAGGCAACACTTTG+GGG - chr5_3:51693243-51693262 None:intergenic 35.0%
GAAAAAGAAGGCAACACTTT+GGG - chr5_3:51693244-51693263 None:intergenic 35.0%
TGAAAAAGAAGGCAACACTT+TGG - chr5_3:51693245-51693264 None:intergenic 35.0%
TTTCAAATACACTACTGGGT+TGG + chr5_3:51693260-51693279 Msa0816900:CDS 35.0%
GGGTTGGATAAGAATCTTAT+TGG + chr5_3:51693276-51693295 Msa0816900:CDS 35.0%
AATCTTATTGGGGATTACCT+TGG + chr5_3:51693288-51693307 Msa0816900:CDS 35.0%
AGTCTCCAAAAATATTCGCA+GGG - chr5_3:51693394-51693413 None:intergenic 35.0%
AAGTCTCCAAAAATATTCGC+AGG - chr5_3:51693395-51693414 None:intergenic 35.0%
TTGAATGATATAGTTCGGAC+AGG - chr5_3:51693656-51693675 None:intergenic 35.0%
ATGAGATAAATCCAACGACT+CGG - chr5_3:51693738-51693757 None:intergenic 35.0%
GATATGTTCTCCATATTGTC+TGG + chr5_3:51693819-51693838 Msa0816900:CDS 35.0%
! TGATAATGCTGAAACTGAAG+AGG + chr5_3:51693872-51693891 Msa0816900:CDS 35.0%
AGAATCCTTCCATACATGTT+TGG - chr5_3:51693902-51693921 None:intergenic 35.0%
! CTGTTTTCACTATTGCCAAT+AGG + chr5_3:51694081-51694100 Msa0816900:CDS 35.0%
TTCACTATTGCCAATAGGTA+TGG + chr5_3:51694086-51694105 Msa0816900:CDS 35.0%
TATGGTGATTACATTCGTAC+AGG + chr5_3:51694104-51694123 Msa0816900:CDS 35.0%
ATGGTGATTACATTCGTACA+GGG + chr5_3:51694105-51694124 Msa0816900:CDS 35.0%
GACACTTCTGAATTGTTTGA+AGG - chr5_3:51694406-51694425 None:intergenic 35.0%
TAGAATTGAACTTCTTTGGC+AGG + chr5_3:51694604-51694623 Msa0816900:CDS 35.0%
ATAGTATGTATCAGCAACAC+GGG - chr5_3:51694798-51694817 None:intergenic 35.0%
CATAGTATGTATCAGCAACA+CGG - chr5_3:51694799-51694818 None:intergenic 35.0%
ATACTATGAGCAGATTACAC+AGG + chr5_3:51694811-51694830 Msa0816900:CDS 35.0%
!! GTGTGAGTGTTGGAATTGAA+GGG + chr5_3:51686590-51686609 Msa0816900:intron 40.0%
! ATTTGAGGTTTGAGCTTTGG+TGG + chr5_3:51686801-51686820 Msa0816900:intron 40.0%
CATTGGCAACACTAACATGA+AGG - chr5_3:51686990-51687009 None:intergenic 40.0%
TCGTCAAGGCAGTATACATA+TGG - chr5_3:51687188-51687207 None:intergenic 40.0%
AACTCCAGAGAAATTCGTCA+AGG - chr5_3:51687202-51687221 None:intergenic 40.0%
CAGAAATGAAACATAGCCCA+AGG - chr5_3:51687356-51687375 None:intergenic 40.0%
ATACCTTAGCAGAACTTCTG+TGG + chr5_3:51687491-51687510 Msa0816900:CDS 40.0%
!!! TGCAGAAATTGGTGCTGTTT+TGG + chr5_3:51687527-51687546 Msa0816900:CDS 40.0%
!!! AGAAATTGGTGCTGTTTTGG+CGG + chr5_3:51687530-51687549 Msa0816900:CDS 40.0%
!!! TTTTTTCTTGGCAGAGTCAG+TGG + chr5_3:51687652-51687671 Msa0816900:CDS 40.0%
! AAGTTGCAGATTTGAGGTGA+CGG + chr5_3:51687857-51687876 Msa0816900:CDS 40.0%
CTTCATCAACACCACTTCTT+CGG - chr5_3:51687892-51687911 None:intergenic 40.0%
TTTCCGTATAGTTCATCAGG+CGG + chr5_3:51687998-51688017 Msa0816900:CDS 40.0%
ATTTACCAAAGCATGCTCTG+TGG - chr5_3:51688114-51688133 None:intergenic 40.0%
ACAGAGCATGCTTTGGTAAA+TGG + chr5_3:51688113-51688132 Msa0816900:CDS 40.0%
!! AAATGGAAGCACCGCTTTAA+AGG + chr5_3:51688130-51688149 Msa0816900:CDS 40.0%
CGCTAAAAAGTAGCAACTGA+TGG - chr5_3:51688223-51688242 None:intergenic 40.0%
!!! TCAGTTGCTACTTTTTAGCG+AGG + chr5_3:51688223-51688242 Msa0816900:intron 40.0%
TAGCGAGGAACTTGATTATG+AGG + chr5_3:51688238-51688257 Msa0816900:intron 40.0%
GAATAATAGGGACCTTAGTG+TGG + chr5_3:51688260-51688279 Msa0816900:intron 40.0%
ATAATAGGGACCTTAGTGTG+GGG + chr5_3:51688262-51688281 Msa0816900:intron 40.0%
TGAATTGTAACCCCACACTA+AGG - chr5_3:51688275-51688294 None:intergenic 40.0%
TACCACCACACAATTTGTAG+GGG - chr5_3:51688630-51688649 None:intergenic 40.0%
TACAAACTTCGTCAGAAGCT+AGG - chr5_3:51688700-51688719 None:intergenic 40.0%
! GGCAGGTCTTAGTTCATTTT+AGG - chr5_3:51688729-51688748 None:intergenic 40.0%
CATTTGAAGGGAAGTCAGTA+AGG - chr5_3:51688750-51688769 None:intergenic 40.0%
! ACTGACTTCCCTTCAAATGT+AGG + chr5_3:51688751-51688770 Msa0816900:intron 40.0%
CTAGATCATACCAGGAAAGA+AGG + chr5_3:51688837-51688856 Msa0816900:intron 40.0%
AGCCTGTGAAAACACGATTT+CGG + chr5_3:51689010-51689029 Msa0816900:intron 40.0%
! GAGACTAACATCTAGCTTAG+AGG + chr5_3:51689063-51689082 Msa0816900:intron 40.0%
GAACCATCATGCACAATGAT+GGG + chr5_3:51689098-51689117 Msa0816900:intron 40.0%
AACCATCATGCACAATGATG+GGG + chr5_3:51689099-51689118 Msa0816900:intron 40.0%
AGTGGGAGATATCAAACCAT+AGG + chr5_3:51689126-51689145 Msa0816900:intron 40.0%
CCATCCTTGTCTATATCCTA+TGG - chr5_3:51689145-51689164 None:intergenic 40.0%
CCATAGGATATAGACAAGGA+TGG + chr5_3:51689142-51689161 Msa0816900:intron 40.0%
AATATCTCTCTGAGCTTGAG+TGG - chr5_3:51689213-51689232 None:intergenic 40.0%
TATACGACGAGACTAGATGT+TGG + chr5_3:51689268-51689287 Msa0816900:intron 40.0%
ATACGACGAGACTAGATGTT+GGG + chr5_3:51689269-51689288 Msa0816900:intron 40.0%
ACTCAGTGACACAGATAGAA+TGG + chr5_3:51689316-51689335 Msa0816900:intron 40.0%
! GTCTACCATCTCTTTTACGA+CGG - chr5_3:51689415-51689434 None:intergenic 40.0%
AGATGGTAGACTGTTGTCTT+GGG + chr5_3:51689424-51689443 Msa0816900:intron 40.0%
AAAACAACAAAGGCTGCTCA+TGG - chr5_3:51689716-51689735 None:intergenic 40.0%
GGCTGCTTCAAAAACAACAA+AGG - chr5_3:51689726-51689745 None:intergenic 40.0%
GAAAATAAAAAGGTTGGGGC+TGG - chr5_3:51689772-51689791 None:intergenic 40.0%
! TGGTCTTTTGCCCAAAAAAG+AGG - chr5_3:51689797-51689816 None:intergenic 40.0%
!!! TGCTATAGTGTTTTTGGGGT+CGG + chr5_3:51690103-51690122 Msa0816900:intron 40.0%
TAGAAGACTGGTAGAGAGAT+TGG + chr5_3:51690155-51690174 Msa0816900:intron 40.0%
ATCCTTAACAAAATTGGCCG+TGG - chr5_3:51690248-51690267 None:intergenic 40.0%
GCCGCTATCCTTAACAAAAT+TGG - chr5_3:51690254-51690273 None:intergenic 40.0%
AAAATTCTTGGATCCTCCAC+TGG - chr5_3:51690340-51690359 None:intergenic 40.0%
ATCTACAGCTACATGTCAAG+TGG + chr5_3:51690415-51690434 Msa0816900:intron 40.0%
GGCCATGAAAATGCGTATTT+GGG - chr5_3:51690463-51690482 None:intergenic 40.0%
AGGCCATGAAAATGCGTATT+TGG - chr5_3:51690464-51690483 None:intergenic 40.0%
GGCTAAAAATGACCAAACTG+AGG + chr5_3:51690518-51690537 Msa0816900:intron 40.0%
! CACGACCTAATTTTATGAGG+GGG + chr5_3:51690549-51690568 Msa0816900:intron 40.0%
ATCTACAGCTACATGTCAAG+TGG + chr5_3:51690415-51690434 Msa0816900:intron 40.0%
GGCCATGAAAATGCGTATTT+GGG - chr5_3:51690463-51690482 None:intergenic 40.0%
AGGCCATGAAAATGCGTATT+TGG - chr5_3:51690464-51690483 None:intergenic 40.0%
!! ACAACACTGATAGTGGCAAA+AGG + chr5_3:51690950-51690969 Msa0816900:intron 40.0%
TCAAAATCTGCCTGACTATG+CGG - chr5_3:51691167-51691186 None:intergenic 40.0%
! ATGTTTTTCCCCATTCATGG+AGG - chr5_3:51691700-51691719 None:intergenic 40.0%
! TTAAAGGTGTGTTTGGATGG+AGG + chr5_3:51691719-51691738 Msa0816900:intron 40.0%
! TAAAGGTGTGTTTGGATGGA+GGG + chr5_3:51691720-51691739 Msa0816900:intron 40.0%
TTTGGATAGAGGGTTTAGGA+GGG - chr5_3:51691949-51691968 None:intergenic 40.0%
TGTGTTTGGATAGAGGGTTT+AGG - chr5_3:51691953-51691972 None:intergenic 40.0%
GGATACAGATTGACTATCAC+TGG - chr5_3:51692257-51692276 None:intergenic 40.0%
GATATTGGAAGCAATGTCTG+TGG - chr5_3:51692278-51692297 None:intergenic 40.0%
GTGAAATATTTCCAGCAAGC+AGG - chr5_3:51692404-51692423 None:intergenic 40.0%
! GTTGAATGTTGGTGAGCATA+TGG + chr5_3:51692438-51692457 Msa0816900:CDS 40.0%
! TTCTAGCTGGAACTTGAGTT+CGG - chr5_3:51692701-51692720 None:intergenic 40.0%
!! GAAGATAATGGACTGTTCAC+AGG - chr5_3:51692928-51692947 None:intergenic 40.0%
!! GGTCTTATTGCTGTCATACA+AGG + chr5_3:51692970-51692989 Msa0816900:CDS 40.0%
TCATACAAGGAATGGCTGAA+AGG + chr5_3:51692983-51693002 Msa0816900:CDS 40.0%
AGGAACCCAATCATTTGGAT+CGG - chr5_3:51693097-51693116 None:intergenic 40.0%
TGCTTTCTTCGACCAACAAA+AGG - chr5_3:51693117-51693136 None:intergenic 40.0%
AGAACTCATCATGGTTTCCA+AGG - chr5_3:51693308-51693327 None:intergenic 40.0%
! TACAGCCCTGCGAATATTTT+TGG + chr5_3:51693386-51693405 Msa0816900:CDS 40.0%
AGAATCACAGAAGATCCAGA+GGG + chr5_3:51693428-51693447 Msa0816900:CDS 40.0%
TCCTTGTTAGCTAGGATATG+CGG - chr5_3:51693492-51693511 None:intergenic 40.0%
! TTTTGACCTGTGAATTGTGC+TGG - chr5_3:51693560-51693579 None:intergenic 40.0%
TGAGATAAATCCAACGACTC+GGG - chr5_3:51693737-51693756 None:intergenic 40.0%
AACTGTTGGACCAGACAATA+TGG - chr5_3:51693832-51693851 None:intergenic 40.0%
! AGAGGTGTACCAAACATGTA+TGG + chr5_3:51693890-51693909 Msa0816900:CDS 40.0%
GTGTACCAAACATGTATGGA+AGG + chr5_3:51693894-51693913 Msa0816900:CDS 40.0%
AGGATTCTTAGCTGTTGCAA+AGG + chr5_3:51693914-51693933 Msa0816900:CDS 40.0%
! AAAGGCTAAGATTGACTCCT+CGG - chr5_3:51694027-51694046 None:intergenic 40.0%
AGAGGACACAAAAGCAAGAA+TGG + chr5_3:51694049-51694068 Msa0816900:CDS 40.0%
TAGTACTCCAAAGAGATCGT+CGG + chr5_3:51694286-51694305 Msa0816900:CDS 40.0%
ATAAATCCCGACGATCTCTT+TGG - chr5_3:51694296-51694315 None:intergenic 40.0%
AGAGACAAGATCAGAACCAT+CGG + chr5_3:51694352-51694371 Msa0816900:CDS 40.0%
!! CGCTTTTGAGTGCTTTAACA+AGG - chr5_3:51694484-51694503 None:intergenic 40.0%
TGATTGCTACAAGTAACTCC+AGG - chr5_3:51694568-51694587 None:intergenic 40.0%
TCGGTCATGTTCTCTTTGTA+GGG - chr5_3:51694734-51694753 None:intergenic 40.0%
ATCGGTCATGTTCTCTTTGT+AGG - chr5_3:51694735-51694754 None:intergenic 40.0%
! ACATGACCGATGAACTTTTG+AGG + chr5_3:51694744-51694763 Msa0816900:CDS 40.0%
GTTAGGTCAATAATCGGAGC+TGG - chr5_3:51686455-51686474 None:intergenic 45.0%
TGACCTAACTCTCACGATCT+CGG + chr5_3:51686466-51686485 Msa0816900:five_prime_UTR 45.0%
TTACCGAGATCGTGAGAGTT+AGG - chr5_3:51686472-51686491 None:intergenic 45.0%
!! CGTGTGAGTGTTGGAATTGA+AGG + chr5_3:51686589-51686608 Msa0816900:intron 45.0%
! AGGGTCTTGTAGGGAATTTC+TGG + chr5_3:51686755-51686774 Msa0816900:intron 45.0%
! GGGTCTTGTAGGGAATTTCT+GGG + chr5_3:51686756-51686775 Msa0816900:intron 45.0%
GCTATAGCGTCATAGCATAG+TGG - chr5_3:51687098-51687117 None:intergenic 45.0%
ACTGCCTTGACGAATTTCTC+TGG + chr5_3:51687195-51687214 Msa0816900:intron 45.0%
AATGCAATGGAAGAGGAAGC+TGG + chr5_3:51687453-51687472 Msa0816900:CDS 45.0%
ATGCAATGGAAGAGGAAGCT+GGG + chr5_3:51687454-51687473 Msa0816900:CDS 45.0%
ATGCCACAGAAGTTCTGCTA+AGG - chr5_3:51687497-51687516 None:intergenic 45.0%
AAGGCTGGAGATACAAGACA+GGG - chr5_3:51687689-51687708 None:intergenic 45.0%
AAAGGCTGGAGATACAAGAC+AGG - chr5_3:51687690-51687709 None:intergenic 45.0%
! CTTGTATCTCCAGCCTTTTC+TGG + chr5_3:51687692-51687711 Msa0816900:CDS 45.0%
GAATCACATCCAGAAAAGGC+TGG - chr5_3:51687704-51687723 None:intergenic 45.0%
GAAACTGGTGCACCAATTAC+TGG + chr5_3:51687732-51687751 Msa0816900:CDS 45.0%
GACAGAGCAACACCAGTAAT+TGG - chr5_3:51687747-51687766 None:intergenic 45.0%
TTCCGTATAGTTCATCAGGC+GGG + chr5_3:51687999-51688018 Msa0816900:CDS 45.0%
TACCCGCCTGATGAACTATA+CGG - chr5_3:51688004-51688023 None:intergenic 45.0%
! CCTCTGCAACAACTCACTTT+TGG - chr5_3:51688027-51688046 None:intergenic 45.0%
CCAAAAGTGAGTTGTTGCAG+AGG + chr5_3:51688024-51688043 Msa0816900:CDS 45.0%
GGAGGTGAGAGAAAATTGTG+CGG - chr5_3:51688079-51688098 None:intergenic 45.0%
!! AAGCACCGCTTTAAAGGAAG+AGG + chr5_3:51688136-51688155 Msa0816900:CDS 45.0%
GATTGCAAGAAACAGGGCAA+AGG - chr5_3:51688178-51688197 None:intergenic 45.0%
TTCCCCTACAAATTGTGTGG+TGG + chr5_3:51688625-51688644 Msa0816900:intron 45.0%
TACTGAACACATCCAGATCC+AGG + chr5_3:51688894-51688913 Msa0816900:intron 45.0%
GCCTGTGAAAACACGATTTC+GGG + chr5_3:51689011-51689030 Msa0816900:intron 45.0%
! ACCCGAAATCGTGTTTTCAC+AGG - chr5_3:51689015-51689034 None:intergenic 45.0%
GGAACCATCATGCACAATGA+TGG + chr5_3:51689097-51689116 Msa0816900:intron 45.0%
! CACAATGATGGGGAGATAGT+GGG + chr5_3:51689109-51689128 Msa0816900:intron 45.0%
GTCTCGTCGTATAACAATGC+AGG - chr5_3:51689261-51689280 None:intergenic 45.0%
! TTGGGTTGTAGAGAGTCACA+AGG + chr5_3:51689287-51689306 Msa0816900:intron 45.0%
AGCTTCCGTCGTAAAAGAGA+TGG + chr5_3:51689407-51689426 Msa0816900:intron 45.0%
GAGATGGTAGACTGTTGTCT+TGG + chr5_3:51689423-51689442 Msa0816900:intron 45.0%
! AGTGGTTTAGAGGTGTGCTA+TGG + chr5_3:51689511-51689530 Msa0816900:intron 45.0%
! GTGGTTTAGAGGTGTGCTAT+GGG + chr5_3:51689512-51689531 Msa0816900:intron 45.0%
! TGGTTTAGAGGTGTGCTATG+GGG + chr5_3:51689513-51689532 Msa0816900:intron 45.0%
AATAAAAAGGTTGGGGCTGG+TGG - chr5_3:51689769-51689788 None:intergenic 45.0%
GACCCCAAAAACACTATAGC+AGG - chr5_3:51690104-51690123 None:intergenic 45.0%
AACCACAGTGTGTAGAAGAC+TGG + chr5_3:51690143-51690162 Msa0816900:intron 45.0%
TACCAGTCTTCTACACACTG+TGG - chr5_3:51690148-51690167 None:intergenic 45.0%
AGACTGGTAGAGAGATTGGT+TGG + chr5_3:51690159-51690178 Msa0816900:intron 45.0%
! GACTGGTAGAGAGATTGGTT+GGG + chr5_3:51690160-51690179 Msa0816900:intron 45.0%
!! CAAATATTGGCTTTCCGCCA+CGG + chr5_3:51690228-51690247 Msa0816900:intron 45.0%
CTTAACAAAATTGGCCGTGG+CGG - chr5_3:51690245-51690264 None:intergenic 45.0%
CCATTTGTCAGCCGGTATAT+CGG + chr5_3:51690275-51690294 Msa0816900:intron 45.0%
GAGCCAGAAATCCGATATAC+CGG - chr5_3:51690289-51690308 None:intergenic 45.0%
CAGCTACATGTCAAGTGGTT+TGG + chr5_3:51690420-51690439 Msa0816900:intron 45.0%
TACGGCCCCCTCATAAAATT+AGG - chr5_3:51690557-51690576 None:intergenic 45.0%
CAGCTACATGTCAAGTGGTT+TGG + chr5_3:51690420-51690439 Msa0816900:intron 45.0%
ATCAGTGTTGTCAATGGCAG+AGG - chr5_3:51690941-51690960 None:intergenic 45.0%
GCCATTGACAACACTGATAG+TGG + chr5_3:51690943-51690962 Msa0816900:intron 45.0%
GCCACTATCAGTGTTGTCAA+TGG - chr5_3:51690947-51690966 None:intergenic 45.0%
TGTGTTTGGATGGAGGGTTT+AGG + chr5_3:51691726-51691745 Msa0816900:intron 45.0%
TTTGGATGGAGGGTTTAGGA+GGG + chr5_3:51691730-51691749 Msa0816900:intron 45.0%
TTGGATAGAGGGTTTAGGAG+GGG - chr5_3:51691948-51691967 None:intergenic 45.0%
GTTTGGATAGAGGGTTTAGG+AGG - chr5_3:51691950-51691969 None:intergenic 45.0%
TTGGGGTGTGTTTGGATAGA+GGG - chr5_3:51691959-51691978 None:intergenic 45.0%
! TTTGGGGTGTGTTTGGATAG+AGG - chr5_3:51691960-51691979 None:intergenic 45.0%
!! TACTCTCTTTGGGGTGTGTT+TGG - chr5_3:51691967-51691986 None:intergenic 45.0%
TGCTACATCGCTCACGATAT+TGG - chr5_3:51692293-51692312 None:intergenic 45.0%
CGATGTAGCAGCAGTTATAG+TGG + chr5_3:51692303-51692322 Msa0816900:CDS 45.0%
AGCTCATGAATGAACCGCAT+GGG + chr5_3:51692374-51692393 Msa0816900:CDS 45.0%
AATTCAGCCATAGAGTTGGG+AGG + chr5_3:51692529-51692548 Msa0816900:CDS 45.0%
! AGCTCAACAATCTAGGGTGT+CGG - chr5_3:51692567-51692586 None:intergenic 45.0%
GAGTCCCCTTGTACTTTCTA+TGG + chr5_3:51692636-51692655 Msa0816900:CDS 45.0%
ACTTGAGTTCGGTACGAAGA+TGG - chr5_3:51692690-51692709 None:intergenic 45.0%
TGGGGCTTCATATCAACAAC+AGG + chr5_3:51692765-51692784 Msa0816900:CDS 45.0%
TCAACAACAGGAAGTAGCCA+TGG + chr5_3:51692777-51692796 Msa0816900:CDS 45.0%
GTTCACAGGAAATGCACTCT+TGG - chr5_3:51692914-51692933 None:intergenic 45.0%
CAAGGAATGGCTGAAAGGAT+AGG + chr5_3:51692988-51693007 Msa0816900:CDS 45.0%
! CTTTGGGGATCAAGTTTGTC+AGG - chr5_3:51693228-51693247 None:intergenic 45.0%
CCTGAACACAGAACTCATCA+TGG - chr5_3:51693317-51693336 None:intergenic 45.0%
CCATGATGAGTTCTGTGTTC+AGG + chr5_3:51693314-51693333 Msa0816900:CDS 45.0%
! GTTCTGTGTTCAGGTTCTTC+AGG + chr5_3:51693323-51693342 Msa0816900:CDS 45.0%
TGGATCTTCTGTGATTCTCC+AGG - chr5_3:51693426-51693445 None:intergenic 45.0%
GAGAATCACAGAAGATCCAG+AGG + chr5_3:51693427-51693446 Msa0816900:CDS 45.0%
AAAATGCTTCAAGCACCCTC+TGG - chr5_3:51693446-51693465 None:intergenic 45.0%
ACCGCATATCCTAGCTAACA+AGG + chr5_3:51693488-51693507 Msa0816900:CDS 45.0%
TACAGACCAGCACAATTCAC+AGG + chr5_3:51693551-51693570 Msa0816900:CDS 45.0%
AACCTTGCTCAGGAGTTGTA+CGG - chr5_3:51693695-51693714 None:intergenic 45.0%
GAGATAAATCCAACGACTCG+GGG - chr5_3:51693736-51693755 None:intergenic 45.0%
ACAGAAATGGCTGCAACTGT+TGG - chr5_3:51693846-51693865 None:intergenic 45.0%
AACAGTTGCAGCCATTTCTG+TGG + chr5_3:51693845-51693864 Msa0816900:CDS 45.0%
! ATTGACTCCTCGGGAGATAA+CGG - chr5_3:51694017-51694036 None:intergenic 45.0%
! AAGGCTAAGATTGACTCCTC+GGG - chr5_3:51694026-51694045 None:intergenic 45.0%
! GAGGAGTCAATCTTAGCCTT+TGG + chr5_3:51694026-51694045 Msa0816900:CDS 45.0%
! GTCAATCTTAGCCTTTGGAG+AGG + chr5_3:51694031-51694050 Msa0816900:CDS 45.0%
! TGCTTTTGTGTCCTCTCCAA+AGG - chr5_3:51694045-51694064 None:intergenic 45.0%
GTGATTACATTCGTACAGGG+TGG + chr5_3:51694108-51694127 Msa0816900:CDS 45.0%
ATTACATTCGTACAGGGTGG+AGG + chr5_3:51694111-51694130 Msa0816900:CDS 45.0%
AGGTCTTCTTCCTGCTCAAA+TGG + chr5_3:51694169-51694188 Msa0816900:CDS 45.0%
TGCTCAAATGGCCAATGATG+CGG + chr5_3:51694181-51694200 Msa0816900:CDS 45.0%
CTTCCACAGAAACTGGGAAT+GGG + chr5_3:51694219-51694238 Msa0816900:CDS 45.0%
AGTACTCCAAAGAGATCGTC+GGG + chr5_3:51694287-51694306 Msa0816900:CDS 45.0%
! GTTAAAGCACTCAAAAGCGC+AGG + chr5_3:51694485-51694504 Msa0816900:CDS 45.0%
CAGGAGTGAGACCTAAGAAA+GGG + chr5_3:51694504-51694523 Msa0816900:CDS 45.0%
GTGAGACCTAAGAAAGGGAA+TGG + chr5_3:51694509-51694528 Msa0816900:CDS 45.0%
! GATGTGCCATTCCCTTTCTT+AGG - chr5_3:51694518-51694537 None:intergenic 45.0%
AGATACTTCAGTCTTCTGCC+TGG + chr5_3:51694547-51694566 Msa0816900:CDS 45.0%
!! CACAGTGGACTGCACAATAT+TGG - chr5_3:51694648-51694667 None:intergenic 45.0%
!! CAGGTAGAGAAGGCTGTTTT+TGG + chr5_3:51694680-51694699 Msa0816900:CDS 45.0%
!!! AGGCTGTTTTTGGACTCTTG+AGG + chr5_3:51694690-51694709 Msa0816900:CDS 45.0%
CTTTGTAGGGAAGTAAGCGA+TGG - chr5_3:51694721-51694740 None:intergenic 45.0%
CAGGGACCTCAAAAGTTCAT+CGG - chr5_3:51694753-51694772 None:intergenic 45.0%
AAGCTTCAGGACAAGTTGCA+GGG - chr5_3:51694771-51694790 None:intergenic 45.0%
!! GAGGAGCATTTGCTTTCACA+AGG - chr5_3:51694847-51694866 None:intergenic 45.0%
!!! AAATATGTATTTTAAAATTA+CGG - chr5_3:51690375-51690394 None:intergenic 5.0%
!!! AAATATGTATTTTAAAATTA+CGG - chr5_3:51690375-51690394 None:intergenic 5.0%
! TGAGGTTTGAGCTTTGGTGG+TGG + chr5_3:51686804-51686823 Msa0816900:intron 50.0%
!! AGATTTGAGGTGACGGATCC+AGG + chr5_3:51687864-51687883 Msa0816900:CDS 50.0%
AACACCACTTCTTCGGATCC+TGG - chr5_3:51687885-51687904 None:intergenic 50.0%
CTGTGGCATCAATGTCTTGG+AGG - chr5_3:51688097-51688116 None:intergenic 50.0%
GCTCTGTGGCATCAATGTCT+TGG - chr5_3:51688100-51688119 None:intergenic 50.0%
TGATGCCACAGAGCATGCTT+TGG + chr5_3:51688106-51688125 Msa0816900:CDS 50.0%
TGAAGGGAAGTCAGTAAGGC+AGG - chr5_3:51688746-51688765 None:intergenic 50.0%
ACACATCCAGATCCAGGAGA+TGG + chr5_3:51688900-51688919 Msa0816900:intron 50.0%
CTCCCCATCATTGTGCATGA+TGG - chr5_3:51689104-51689123 None:intergenic 50.0%
! GCACAATGATGGGGAGATAG+TGG + chr5_3:51689108-51689127 Msa0816900:intron 50.0%
! TGGTAGAGAGATTGGTTGGG+AGG + chr5_3:51690163-51690182 Msa0816900:intron 50.0%
! GGTAGAGAGATTGGTTGGGA+GGG + chr5_3:51690164-51690183 Msa0816900:intron 50.0%
! CGCCACGGCCAATTTTGTTA+AGG + chr5_3:51690243-51690262 Msa0816900:intron 50.0%
! CCGATATACCGGCTGACAAA+TGG - chr5_3:51690278-51690297 None:intergenic 50.0%
CAGCCGGTATATCGGATTTC+TGG + chr5_3:51690283-51690302 Msa0816900:intron 50.0%
TTGGATCCTCCACTGGTCAA+TGG - chr5_3:51690333-51690352 None:intergenic 50.0%
CGTGTGTTCGATCCTCAGTT+TGG - chr5_3:51690533-51690552 None:intergenic 50.0%
CGTGTGTTCGATCCTCAGTT+TGG - chr5_3:51690533-51690552 None:intergenic 50.0%
AGTGTTGTCAATGGCAGAGG+CGG - chr5_3:51690938-51690957 None:intergenic 50.0%
GCACTACCTTAAAGGTGAGG+AGG - chr5_3:51691310-51691329 None:intergenic 50.0%
GTGGCACTACCTTAAAGGTG+AGG - chr5_3:51691313-51691332 None:intergenic 50.0%
ACGTGGTGCAGGAAAAGACA+TGG - chr5_3:51691660-51691679 None:intergenic 50.0%
TTCCTGCACCACGTTCTTGT+TGG + chr5_3:51691666-51691685 Msa0816900:intron 50.0%
TGCAACAGCCAACAAGAACG+TGG - chr5_3:51691677-51691696 None:intergenic 50.0%
GCTGTTGCACCTCCATGAAT+GGG + chr5_3:51691688-51691707 Msa0816900:intron 50.0%
CTGTTGCACCTCCATGAATG+GGG + chr5_3:51691689-51691708 Msa0816900:intron 50.0%
GTTTGGATGGAGGGTTTAGG+AGG + chr5_3:51691729-51691748 Msa0816900:intron 50.0%
TTGGATGGAGGGTTTAGGAG+GGG + chr5_3:51691731-51691750 Msa0816900:intron 50.0%
CAGCTCATGAATGAACCGCA+TGG + chr5_3:51692373-51692392 Msa0816900:CDS 50.0%
GGAAGAACCTCCCAACTCTA+TGG - chr5_3:51692539-51692558 None:intergenic 50.0%
!! CAATCTAGGGTGTCGGTGAA+AGG - chr5_3:51692560-51692579 None:intergenic 50.0%
ACAACAGGAAGTAGCCATGG+AGG + chr5_3:51692780-51692799 Msa0816900:CDS 50.0%
GAAGTCAACAAGTGCCTCCA+TGG - chr5_3:51692797-51692816 None:intergenic 50.0%
!! AGGCACTTGTTGACTTCTGC+AGG + chr5_3:51692800-51692819 Msa0816900:CDS 50.0%
!! CTGCAGGCAAAAAGCATTCG+TGG + chr5_3:51692816-51692835 Msa0816900:CDS 50.0%
!! CAGGCAAAAAGCATTCGTGG+TGG + chr5_3:51692819-51692838 Msa0816900:CDS 50.0%
TTGGAGACTTTCAGACTGCC+TGG + chr5_3:51693405-51693424 Msa0816900:CDS 50.0%
GAGCAGCATCCTTGTTAGCT+AGG - chr5_3:51693500-51693519 None:intergenic 50.0%
ATGGCGGCAATGATCTACCT+CGG + chr5_3:51693625-51693644 Msa0816900:CDS 50.0%
ATCCGTACAACTCCTGAGCA+AGG + chr5_3:51693690-51693709 Msa0816900:CDS 50.0%
GGAAAAGCAGAACCTTGCTC+AGG - chr5_3:51693705-51693724 None:intergenic 50.0%
TTTGGATCCGTTATCTCCCG+AGG + chr5_3:51694007-51694026 Msa0816900:CDS 50.0%
GCATCATTGGCCATTTGAGC+AGG - chr5_3:51694182-51694201 None:intergenic 50.0%
! TGTGGAAGGCTCTGACTCTT+CGG - chr5_3:51694207-51694226 None:intergenic 50.0%
TCAGAGCCTTCCACAGAAAC+TGG + chr5_3:51694212-51694231 Msa0816900:CDS 50.0%
CAGAGCCTTCCACAGAAACT+GGG + chr5_3:51694213-51694232 Msa0816900:CDS 50.0%
CCATTCCCAGTTTCTGTGGA+AGG - chr5_3:51694221-51694240 None:intergenic 50.0%
CCTTCCACAGAAACTGGGAA+TGG + chr5_3:51694218-51694237 Msa0816900:CDS 50.0%
CTTCCCATTCCCAGTTTCTG+TGG - chr5_3:51694225-51694244 None:intergenic 50.0%
GATCGTCGGGATTTATCAGC+AGG + chr5_3:51694300-51694319 Msa0816900:CDS 50.0%
ATCTTGTCTCTTCAGCGCCA+AGG - chr5_3:51694343-51694362 None:intergenic 50.0%
GCAGCAAGTTGTTCTTCCGA+TGG - chr5_3:51694371-51694390 None:intergenic 50.0%
GCAGGAGTGAGACCTAAGAA+AGG + chr5_3:51694503-51694522 Msa0816900:CDS 50.0%
GAAAGGGAATGGCACATCTG+AGG + chr5_3:51694520-51694539 Msa0816900:CDS 50.0%
! CTGTGTACAAGGCATCACAG+TGG - chr5_3:51694663-51694682 None:intergenic 50.0%
CACTGTGATGCCTTGTACAC+AGG + chr5_3:51694661-51694680 Msa0816900:CDS 50.0%
GCCTTGTACACAGGTAGAGA+AGG + chr5_3:51694670-51694689 Msa0816900:CDS 50.0%
GCCTTCTCTACCTGTGTACA+AGG - chr5_3:51694674-51694693 None:intergenic 50.0%
CAAGCTTCAGGACAAGTTGC+AGG - chr5_3:51694772-51694791 None:intergenic 50.0%
!! GGTTTGAGCTTTGGTGGTGG+AGG + chr5_3:51686807-51686826 Msa0816900:intron 55.0%
TGTTGGGGATGCCATGCACT+TGG + chr5_3:51687818-51687837 Msa0816900:CDS 55.0%
! TGCCATGCACTTGGTAGTCG+AGG + chr5_3:51687827-51687846 Msa0816900:CDS 55.0%
AGCCTCGACTACCAAGTGCA+TGG - chr5_3:51687832-51687851 None:intergenic 55.0%
GGATCCAGGATCCGAAGAAG+TGG + chr5_3:51687878-51687897 Msa0816900:CDS 55.0%
GTGACACCATCTCCTGGATC+TGG - chr5_3:51688909-51688928 None:intergenic 55.0%
GGCATTGTGACACCATCTCC+TGG - chr5_3:51688915-51688934 None:intergenic 55.0%
TGGGGCTCTGTTGTCAAACG+CGG + chr5_3:51689531-51689550 Msa0816900:intron 55.0%
! TTAGGGGAAAGCGGGTTTCG+TGG + chr5_3:51689627-51689646 Msa0816900:intron 55.0%
!!! GTTTCGTGGCCGCTTTTACG+TGG + chr5_3:51689641-51689660 Msa0816900:intron 55.0%
! GGAGCGGAGCGTTTCAAAAG+CGG + chr5_3:51689662-51689681 Msa0816900:intron 55.0%
! GAGCGGAGCGTTTCAAAAGC+GGG + chr5_3:51689663-51689682 Msa0816900:intron 55.0%
CACTGGTCAATGGAGGATGG+CGG - chr5_3:51690323-51690342 None:intergenic 55.0%
CTCCACTGGTCAATGGAGGA+TGG - chr5_3:51690326-51690345 None:intergenic 55.0%
CATCCTCCATTGACCAGTGG+AGG + chr5_3:51690324-51690343 Msa0816900:intron 55.0%
GATCCTCCACTGGTCAATGG+AGG - chr5_3:51690330-51690349 None:intergenic 55.0%
TCATATGTAGTCCGGCGCAG+TGG - chr5_3:51690784-51690803 None:intergenic 55.0%
CTGCGCCGGACTACATATGA+AGG + chr5_3:51690784-51690803 Msa0816900:intron 55.0%
TTCCCGTAGTCCGCATAGTC+AGG + chr5_3:51691154-51691173 Msa0816900:intron 55.0%
! TGCCTGACTATGCGGACTAC+GGG - chr5_3:51691159-51691178 None:intergenic 55.0%
! CTGCCTGACTATGCGGACTA+CGG - chr5_3:51691160-51691179 None:intergenic 55.0%
AGCCAACAAGAACGTGGTGC+AGG - chr5_3:51691671-51691690 None:intergenic 55.0%
GGCTGTTGCACCTCCATGAA+TGG + chr5_3:51691687-51691706 Msa0816900:intron 55.0%
ATGGAGGGTTTAGGAGGGGA+AGG + chr5_3:51691735-51691754 Msa0816900:intron 55.0%
TGGAGGGTTTAGGAGGGGAA+GGG + chr5_3:51691736-51691755 Msa0816900:intron 55.0%
GGTTTAGGAGGGGAAGAGAG+GGG - chr5_3:51691938-51691957 None:intergenic 55.0%
GGGTTTAGGAGGGGAAGAGA+GGG - chr5_3:51691939-51691958 None:intergenic 55.0%
AGGGTTTAGGAGGGGAAGAG+AGG - chr5_3:51691940-51691959 None:intergenic 55.0%
GCAAACACAGCTACGAGCAG+TGG + chr5_3:51692328-51692347 Msa0816900:CDS 55.0%
AGCAAGCAGGGAATCCCATG+CGG - chr5_3:51692391-51692410 None:intergenic 55.0%
TGGCGGCAATGATCTACCTC+GGG + chr5_3:51693626-51693645 Msa0816900:CDS 55.0%
! CAACGACTCGGGGTCATTTC+TGG - chr5_3:51693726-51693745 None:intergenic 55.0%
CAGAAATGACCCCGAGTCGT+TGG + chr5_3:51693724-51693743 Msa0816900:CDS 55.0%
TGACTCTTCGGCCGCATCAT+TGG - chr5_3:51694195-51694214 None:intergenic 55.0%
CAACACGGGCATCAAGCTTC+AGG - chr5_3:51694784-51694803 None:intergenic 55.0%
GAAGAGGAAGCTGGGCAGTG+TGG + chr5_3:51687462-51687481 Msa0816900:CDS 60.0%
GAAGCTGGGCAGTGTGGTGT+TGG + chr5_3:51687468-51687487 Msa0816900:CDS 60.0%
! GTGACGCGGCAGCCCATTTT+TGG - chr5_3:51689588-51689607 None:intergenic 60.0%
!!! GTGGCCGCTTTTACGTGGAG+CGG + chr5_3:51689646-51689665 Msa0816900:intron 60.0%
CGCTCCGCTCCACGTAAAAG+CGG - chr5_3:51689653-51689672 None:intergenic 60.0%
GAGAGGAGGCTAGGGTCACA+TGG - chr5_3:51689747-51689766 None:intergenic 60.0%
! AAAGGTTGGGGCTGGTGGAG+AGG - chr5_3:51689764-51689783 None:intergenic 60.0%
TAGCGGCGCCATTTGTCAGC+CGG + chr5_3:51690267-51690286 Msa0816900:intron 60.0%
!! GGATTTCTGGCTCTCCGCCA+TGG + chr5_3:51690296-51690315 Msa0816900:intron 60.0%
!! CAATGGAGGATGGCGGACCA+TGG - chr5_3:51690316-51690335 None:intergenic 60.0%
CGCCATCCTCCATTGACCAG+TGG + chr5_3:51690321-51690340 Msa0816900:intron 60.0%
AATGGCAGAGGCGGATCCAG+GGG - chr5_3:51690929-51690948 None:intergenic 60.0%
CAATGGCAGAGGCGGATCCA+GGG - chr5_3:51690930-51690949 None:intergenic 60.0%
TCAATGGCAGAGGCGGATCC+AGG - chr5_3:51690931-51690950 None:intergenic 60.0%
AGGGTTTAGGAGGGGAAGGG+AGG + chr5_3:51691739-51691758 Msa0816900:intron 60.0%
GGGTTTAGGAGGGGAAGGGA+GGG + chr5_3:51691740-51691759 Msa0816900:intron 60.0%
GGTTTAGGAGGGGAAGGGAG+GGG + chr5_3:51691741-51691760 Msa0816900:intron 60.0%
TAGGAGGGGAAGAGAGGGGA+GGG - chr5_3:51691934-51691953 None:intergenic 60.0%
TTAGGAGGGGAAGAGAGGGG+AGG - chr5_3:51691935-51691954 None:intergenic 60.0%
CACAGCTACGAGCAGTGGCA+AGG + chr5_3:51692333-51692352 Msa0816900:CDS 60.0%
GCATGGGATTCCCTGCTTGC+TGG + chr5_3:51692390-51692409 Msa0816900:CDS 60.0%
AGTTCGGACAGGACTTCCCG+AGG - chr5_3:51693645-51693664 None:intergenic 60.0%
TTGTCAAACGCGGCCGCTCC+CGG + chr5_3:51689541-51689560 Msa0816900:intron 65.0%
GGCGCGGAGCGGCCAAAAAT+GGG + chr5_3:51689573-51689592 Msa0816900:intron 65.0%
CTTTCCCCTAACGCGCTGCG+CGG - chr5_3:51689618-51689637 None:intergenic 65.0%
CGCAGCGCGTTAGGGGAAAG+CGG + chr5_3:51689618-51689637 Msa0816900:intron 65.0%
GCAGCGCGTTAGGGGAAAGC+GGG + chr5_3:51689619-51689638 Msa0816900:intron 65.0%
GGCTGGTGGAGAGGAGGCTA+GGG - chr5_3:51689755-51689774 None:intergenic 65.0%
!! TGGAGGATGGCGGACCATGG+CGG - chr5_3:51690313-51690332 None:intergenic 65.0%
GAGTTGCATGGCCACTGCGC+CGG + chr5_3:51690770-51690789 Msa0816900:intron 65.0%
ATGGCAGAGGCGGATCCAGG+GGG - chr5_3:51690928-51690947 None:intergenic 65.0%
TTAGGAGGGGAAGGGAGGGG+AGG + chr5_3:51691744-51691763 Msa0816900:intron 65.0%
TAGGAGGGGAAGGGAGGGGA+GGG + chr5_3:51691745-51691764 Msa0816900:intron 65.0%
CGGCGCGGAGCGGCCAAAAA+TGG + chr5_3:51689572-51689591 Msa0816900:intron 70.0%
TGCGCGGTGGCGTTGTGACG+CGG - chr5_3:51689602-51689621 None:intergenic 70.0%
! GGGCTGGTGGAGAGGAGGCT+AGG - chr5_3:51689756-51689775 None:intergenic 70.0%
! GGTTGGGGCTGGTGGAGAGG+AGG - chr5_3:51689761-51689780 None:intergenic 70.0%
GGGGGGACTAGGGAGGGTCA+GGG - chr5_3:51690908-51690927 None:intergenic 70.0%
TCCAGGGGGGGGACTAGGGA+GGG - chr5_3:51690914-51690933 None:intergenic 70.0%
ATCCAGGGGGGGGACTAGGG+AGG - chr5_3:51690915-51690934 None:intergenic 70.0%
CGGATCCAGGGGGGGGACTA+GGG - chr5_3:51690918-51690937 None:intergenic 70.0%
TGGCAGAGGCGGATCCAGGG+GGG - chr5_3:51690927-51690946 None:intergenic 70.0%
AGGAGGGGAAGGGAGGGGAG+GGG + chr5_3:51691746-51691765 Msa0816900:intron 70.0%
GGCCGCTCCCGGCGCTATCA+CGG + chr5_3:51689552-51689571 Msa0816900:intron 75.0%
! CGCCGTGATAGCGCCGGGAG+CGG - chr5_3:51689557-51689576 None:intergenic 75.0%
CTCCCGGCGCTATCACGGCG+CGG + chr5_3:51689557-51689576 Msa0816900:intron 75.0%
! CTCCGCGCCGTGATAGCGCC+GGG - chr5_3:51689562-51689581 None:intergenic 75.0%
! GCTCCGCGCCGTGATAGCGC+CGG - chr5_3:51689563-51689582 None:intergenic 75.0%
GGCGCTATCACGGCGCGGAG+CGG + chr5_3:51689562-51689581 Msa0816900:intron 75.0%
ACGCCACCGCGCAGCGCGTT+AGG + chr5_3:51689609-51689628 Msa0816900:intron 75.0%
CGCCACCGCGCAGCGCGTTA+GGG + chr5_3:51689610-51689629 Msa0816900:intron 75.0%
GCCACCGCGCAGCGCGTTAG+GGG + chr5_3:51689611-51689630 Msa0816900:intron 75.0%
TCCCCTAACGCGCTGCGCGG+TGG - chr5_3:51689615-51689634 None:intergenic 75.0%
GGGGGGGACTAGGGAGGGTC+AGG - chr5_3:51690909-51690928 None:intergenic 75.0%
ACCCTCCCTAGTCCCCCCCC+TGG + chr5_3:51690910-51690929 Msa0816900:intron 75.0%
GCGGATCCAGGGGGGGGACT+AGG - chr5_3:51690919-51690938 None:intergenic 75.0%
GCAGAGGCGGATCCAGGGGG+GGG - chr5_3:51690925-51690944 None:intergenic 75.0%
GGCAGAGGCGGATCCAGGGG+GGG - chr5_3:51690926-51690945 None:intergenic 75.0%
AGGGGAAGGGAGGGGAGGGG+AGG + chr5_3:51691749-51691768 Msa0816900:intron 75.0%
GGGGAAGGGAGGGGAGGGGA+GGG + chr5_3:51691750-51691769 Msa0816900:intron 75.0%
GGGAAGGGAGGGGAGGGGAG+GGG + chr5_3:51691751-51691770 Msa0816900:intron 75.0%
AAGGGAGGGGAGGGGAGGGG+AGG + chr5_3:51691754-51691773 Msa0816900:intron 75.0%
AGGGAGGGGAGGGGAGGGGA+GGG + chr5_3:51691755-51691774 Msa0816900:intron 75.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 51686335 51694871 51686335 ID=Msa0816900;Name=Msa0816900
chr5_3 mRNA 51686335 51694871 51686335 ID=Msa0816900-mRNA-1;Parent=Msa0816900;Name=Msa0816900-mRNA-1;_AED=0.00;_eAED=0.00;_QI=167|1|0.66|1|0.5|0|3|0|1142
chr5_3 exon 51686335 51686487 51686335 ID=Msa0816900-mRNA-1:exon:15505;Parent=Msa0816900-mRNA-1
chr5_3 exon 51687403 51688157 51687403 ID=Msa0816900-mRNA-1:exon:15506;Parent=Msa0816900-mRNA-1
chr5_3 exon 51692187 51694871 51692187 ID=Msa0816900-mRNA-1:exon:15507;Parent=Msa0816900-mRNA-1
chr5_3 five_prime_UTR 51686335 51686487 51686335 ID=Msa0816900-mRNA-1:five_prime_utr;Parent=Msa0816900-mRNA-1
chr5_3 five_prime_UTR 51687403 51687416 51687403 ID=Msa0816900-mRNA-1:five_prime_utr;Parent=Msa0816900-mRNA-1
chr5_3 CDS 51687417 51688157 51687417 ID=Msa0816900-mRNA-1:cds;Parent=Msa0816900-mRNA-1
chr5_3 CDS 51692187 51694871 51692187 ID=Msa0816900-mRNA-1:cds;Parent=Msa0816900-mRNA-1
Gene Sequence

>Msa0816900

ATGGCAGATGCGAAGTTGCAAATGCAAACTGATATCAATGCAATGGAAGAGGAAGCTGGGCAGTGTGGTGTTGGATACCTTAGCAGAACTTCTGTGGCATGCATGATCAATGCAGAAATTGGTGCTGTTTTGGCGGTCATGCGAAGAAATGTTAGATGGGGTGTTCATTATATGTCGGATGATGATCAATTGGAGCATTCCCTTGTTCAATCTTTAAAGGCATTAAGGAGGGAAATTTTTTCTTGGCAGAGTCAGTGGCATGTCATAAACCCTGTCTTGTATCTCCAGCCTTTTCTGGATGTGATTCAATCTGATGAAACTGGTGCACCAATTACTGGTGTTGCTCTGTCGTCTGTTTACAAGATTTTAACTTTGGATGTAATTGATGAAAACACTGTCAATGTTGGGGATGCCATGCACTTGGTAGTCGAGGCTGTTACAAGTTGCAGATTTGAGGTGACGGATCCAGGATCCGAAGAAGTGGTGTTGATGAAGATATTGCAAGTTCTTCTAGCATGTGTAAAAAGTAAATCATCTGTGATGCTAAGTAACCAACATATCTGCACCATAGTAAACACTTGTTTCCGTATAGTTCATCAGGCGGGTACCAAAAGTGAGTTGTTGCAGAGGATAGCGCGCTACACTATGCATGAACTTGTCCGCACAATTTTCTCTCACCTCCAAGACATTGATGCCACAGAGCATGCTTTGGTAAATGGAAGCACCGCTTTAAAGGAAGAGATTGATGGGCAAAAAAATGAGCATAATTCTACGCACAATCAATTGGAAAATGGTAGTTTGATTTCAGCCAGTGATAGTCAATCTGTATCCACAGACATTGCTTCCAATATCGTGAGCGATGTAGCAGCAGTTATAGTGGATGCAAACACAGCTACGAGCAGTGGCAAGGAGACTGATCTTAATAAACAGCTCATGAATGAACCGCATGGGATTCCCTGCTTGCTGGAAATATTTCACTTCTTATGTTCACTGTTGAATGTTGGTGAGCATATGGGAATGAGTCCTCGATCTAACACAATAGCATTTGATGAAGACGTTCCCCTTTTTGCCTTAACATTGATTAATTCAGCCATAGAGTTGGGAGGTTCTTCCTTTCACCGACACCCTAGATTGTTGAGCTTAATTCAGGATGAATTATTCTGCAATCTTATGCAATTTGGTTTGTCAATGAGTCCCCTTGTACTTTCTATGGTAAGTAGCATTGTTTTAAATTTGTATCACCATCTTCGTACCGAACTCAAGTTCCAGCTAGAAGCATTTTTTTCTTGTGTAATTTTGAGACTTGCACAAAGCAAATATGGGGCTTCATATCAACAACAGGAAGTAGCCATGGAGGCACTTGTTGACTTCTGCAGGCAAAAAGCATTCGTGGTGGAGATGTATGCTAACTTTGACTGTGACATAACTTGCAGTAATATCTTTGAAGATATTGCTAATTTGTTATCCAAGAGTGCATTTCCTGTGAACAGTCCATTATCTTCCATGAATATTCTTGCTTTGGATGGTCTTATTGCTGTCATACAAGGAATGGCTGAAAGGATAGGTAACAGATCTTTGAGTTCAGAACATTCTGTTGTGAATCTTGAAGAGTATACACCATTTTGGCTTGAAAAGTGTGAAAATTTCACCGATCCAAATGATTGGGTTCCTTTTGTTGGTCGAAGAAAGCACTTCAAGAAAAGATTGATGATTGGTGCTGATCATTTTAATCGTGATACTAAGAAAGGTCTTCAGTTTCTTCAAGGAACACATCTTTTGCCTGACAAACTTGATCCCCAAAGTGTTGCCTTCTTTTTCAAATACACTACTGGGTTGGATAAGAATCTTATTGGGGATTACCTTGGAAACCATGATGAGTTCTGTGTTCAGGTTCTTCAGGAATTTGCTAGAACATTTGATTTTAAAGACATGGCATTAGATACAGCCCTGCGAATATTTTTGGAGACTTTCAGACTGCCTGGAGAATCACAGAAGATCCAGAGGGTGCTTGAAGCATTTTCAGAGAGATATTATGAGCAGTCACCGCATATCCTAGCTAACAAGGATGCTGCTCTTTTGTTATCATATTCAATTATATTGCTTAATACAGACCAGCACAATTCACAGGTCAAAAAGAAGATGACAGAAGAAGATTTTGTCCGAAACAATAGGAGAATAAATGGCGGCAATGATCTACCTCGGGAAGTCCTGTCCGAACTATATCATTCAATTTGTAAAAACGAGATCCGTACAACTCCTGAGCAAGGTTCTGCTTTTCCAGAAATGACCCCGAGTCGTTGGATTTATCTCATACACAAGTCAAAAAACACAGCTCCATTTATTGTTTCTGATTGCAGAGCACACCTTGATTATGATATGTTCTCCATATTGTCTGGTCCAACAGTTGCAGCCATTTCTGTGGTATTTGATAATGCTGAAACTGAAGAGGTGTACCAAACATGTATGGAAGGATTCTTAGCTGTTGCAAAGGTATCAGCTTATTATCATCTTGAAAGTATACTAGATGATTTGGTTGTGTCGCTTTGCAAGTTTGTTACTATTTTGGATCCGTTATCTCCCGAGGAGTCAATCTTAGCCTTTGGAGAGGACACAAAAGCAAGAATGGCAACTGAGACTGTTTTCACTATTGCCAATAGGTATGGTGATTACATTCGTACAGGGTGGAGGAATATTCTCGATTGCATCTTAAAATTTCACAAGTTAGGTCTTCTTCCTGCTCAAATGGCCAATGATGCGGCCGAAGAGTCAGAGCCTTCCACAGAAACTGGGAATGGGAAGCGTTATGCTAACTCGTTATCTTCATCTCAGCTTTTATCTGTTAGTACTCCAAAGAGATCGTCGGGATTTATCAGCAGGTTTAGTCAACTCTTATACCTTGGCGCTGAAGAGACAAGATCAGAACCATCGGAAGAACAACTTGCTGCTCAGCAGTGTTCCCTTCAAACAATTCAGAAGTGTCACATTGAGAGCATATTTACTGAGAGTAAATTTTTGCAAGCTGAATCTCTATTACACCTTGTTAAAGCACTCAAAAGCGCAGGAGTGAGACCTAAGAAAGGGAATGGCACATCTGAGGATGAAGATACTTCAGTCTTCTGCCTGGAGTTACTTGTAGCAATCACTTTGAATAATCGAGATAGAATTGAACTTCTTTGGCAGGATGTTTATGAGCATATTTCCAATATTGTGCAGTCCACTGTGATGCCTTGTACACAGGTAGAGAAGGCTGTTTTTGGACTCTTGAGGATTTGCCATCGCTTACTTCCCTACAAAGAGAACATGACCGATGAACTTTTGAGGTCCCTGCAACTTGTCCTGAAGCTTGATGCCCGTGTTGCTGATACATACTATGAGCAGATTACACAGGAAGTTAGCAACCTTGTGAAAGCAAATGCTCCTCATATC
Protein sequence

>Msa0816900

MADAKLQMQTDINAMEEEAGQCGVGYLSRTSVACMINAEIGAVLAVMRRNVRWGVHYMSDDDQLEHSLVQSLKALRREIFSWQSQWHVINPVLYLQPFLDVIQSDETGAPITGVALSSVYKILTLDVIDENTVNVGDAMHLVVEAVTSCRFEVTDPGSEEVVLMKILQVLLACVKSKSSVMLSNQHICTIVNTCFRIVHQAGTKSELLQRIARYTMHELVRTIFSHLQDIDATEHALVNGSTALKEEIDGQKNEHNSTHNQLENGSLISASDSQSVSTDIASNIVSDVAAVIVDANTATSSGKETDLNKQLMNEPHGIPCLLEIFHFLCSLLNVGEHMGMSPRSNTIAFDEDVPLFALTLINSAIELGGSSFHRHPRLLSLIQDELFCNLMQFGLSMSPLVLSMVSSIVLNLYHHLRTELKFQLEAFFSCVILRLAQSKYGASYQQQEVAMEALVDFCRQKAFVVEMYANFDCDITCSNIFEDIANLLSKSAFPVNSPLSSMNILALDGLIAVIQGMAERIGNRSLSSEHSVVNLEEYTPFWLEKCENFTDPNDWVPFVGRRKHFKKRLMIGADHFNRDTKKGLQFLQGTHLLPDKLDPQSVAFFFKYTTGLDKNLIGDYLGNHDEFCVQVLQEFARTFDFKDMALDTALRIFLETFRLPGESQKIQRVLEAFSERYYEQSPHILANKDAALLLSYSIILLNTDQHNSQVKKKMTEEDFVRNNRRINGGNDLPREVLSELYHSICKNEIRTTPEQGSAFPEMTPSRWIYLIHKSKNTAPFIVSDCRAHLDYDMFSILSGPTVAAISVVFDNAETEEVYQTCMEGFLAVAKVSAYYHLESILDDLVVSLCKFVTILDPLSPEESILAFGEDTKARMATETVFTIANRYGDYIRTGWRNILDCILKFHKLGLLPAQMANDAAEESEPSTETGNGKRYANSLSSSQLLSVSTPKRSSGFISRFSQLLYLGAEETRSEPSEEQLAAQQCSLQTIQKCHIESIFTESKFLQAESLLHLVKALKSAGVRPKKGNGTSEDEDTSVFCLELLVAITLNNRDRIELLWQDVYEHISNIVQSTVMPCTQVEKAVFGLLRICHRLLPYKENMTDELLRSLQLVLKLDARVADTYYEQITQEVSNLVKANAPHI