Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0817760 | sp|Q9FEL8|LAX1_MEDTR | 99.165 | 479 | 4 | 0 | 1 | 479 | 1 | 479 | 0.0 | 981 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0817760 | G7KGX5 | 99.165 | 479 | 4 | 0 | 1 | 479 | 1 | 479 | 0.0 | 981 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0081020 | Msa0817760 | 0.839580 | 1.455077e-57 | -8.615850e-47 |
| Msa0738340 | Msa0817760 | 0.870161 | 1.798001e-66 | -8.615850e-47 |
| Msa0817760 | Msa0829300 | 0.813927 | 1.998100e-51 | -8.615850e-47 |
| Msa0817760 | Msa0829330 | 0.806206 | 9.205528e-50 | -8.615850e-47 |
| Msa0817760 | Msa0937230 | 0.802352 | 5.843157e-49 | -8.615850e-47 |
| Msa0817760 | Msa0965290 | 0.801701 | 7.952533e-49 | -8.615850e-47 |
| Msa0817760 | Msa0974520 | 0.807328 | 5.333746e-50 | -8.615850e-47 |
| Msa0817760 | Msa1415540 | 0.808309 | 3.298986e-50 | -8.615850e-47 |
| Msa0269970 | Msa0817760 | 0.800469 | 1.420217e-48 | -8.615850e-47 |
| Msa0528570 | Msa0817760 | 0.815235 | 1.025627e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0817760 | MtrunA17_Chr5g0436811 | 99.165 | 479 | 4 | 0 | 1 | 479 | 1 | 479 | 0.0 | 981 |
| Msa0817760 | MtrunA17_Chr7g0241841 | 85.256 | 468 | 66 | 2 | 1 | 466 | 1 | 467 | 0.0 | 831 |
| Msa0817760 | MtrunA17_Chr4g0006031 | 84.154 | 467 | 73 | 1 | 1 | 466 | 1 | 467 | 0.0 | 825 |
| Msa0817760 | MtrunA17_Chr4g0037361 | 76.496 | 468 | 106 | 1 | 9 | 472 | 2 | 469 | 0.0 | 757 |
| Msa0817760 | MtrunA17_Chr3g0114951 | 76.562 | 448 | 93 | 1 | 21 | 468 | 15 | 450 | 0.0 | 706 |
| Msa0817760 | MtrunA17_Chr4g0027241 | 23.973 | 438 | 275 | 15 | 1 | 403 | 4 | 418 | 1.01e-13 | 73.2 |
| Msa0817760 | MtrunA17_Chr8g0387941 | 24.736 | 473 | 284 | 23 | 22 | 460 | 13 | 447 | 1.11e-13 | 72.8 |
| Msa0817760 | MtrunA17_Chr1g0198081 | 21.844 | 499 | 316 | 15 | 6 | 462 | 14 | 480 | 8.50e-13 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0817760 | AT2G38120.1 | 83.761 | 468 | 72 | 1 | 5 | 468 | 2 | 469 | 0.0 | 820 |
| Msa0817760 | AT5G01240.1 | 78.601 | 486 | 97 | 3 | 1 | 479 | 1 | 486 | 0.0 | 787 |
| Msa0817760 | AT2G21050.1 | 78.146 | 453 | 96 | 1 | 17 | 466 | 9 | 461 | 0.0 | 746 |
| Msa0817760 | AT1G77690.1 | 78.509 | 456 | 93 | 1 | 21 | 471 | 15 | 470 | 0.0 | 726 |
| Msa0817760 | AT2G38120.2 | 84.069 | 408 | 61 | 1 | 5 | 408 | 2 | 409 | 0.0 | 716 |
| Msa0817760 | AT5G01240.2 | 82.759 | 406 | 69 | 1 | 75 | 479 | 1 | 406 | 0.0 | 701 |
Find 141 sgRNAs with CRISPR-Local
Find 436 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTATAATCTTCCCTTTCTT+TGG | 0.196484 | 5_3:+53211914 | Msa0817760:CDS |
| AACTGCACTTTCCTTCTCTT+TGG | 0.203019 | 5_3:+53208521 | Msa0817760:CDS |
| CTCAGCTGTAGGGGCTCTTT+TGG | 0.244420 | 5_3:+53211946 | Msa0817760:CDS |
| AAGGTTTACTTGGTCCTTAT+TGG | 0.255074 | 5_3:+53208477 | Msa0817760:CDS |
| AATCCAATTGCTTTCCAATA+AGG | 0.261089 | 5_3:-53208491 | None:intergenic |
| TCATTCGGGCCCAAAGAAAA+TGG | 0.279960 | 5_3:+53209424 | Msa0817760:CDS |
| GTTGGCTATAATCGAGTCTA+TGG | 0.281344 | 5_3:-53213880 | None:intergenic |
| AGCCCCTACAGCTGAGTTAA+TGG | 0.289657 | 5_3:-53211939 | None:intergenic |
| AAACCCAACATTTAATTTGT+TGG | 0.303649 | 5_3:-53213898 | None:intergenic |
| ATCAAACAAGTTGACACATT+TGG | 0.304064 | 5_3:+53213617 | Msa0817760:CDS |
| TCTCAGCTAGGAATGATTTC+AGG | 0.305170 | 5_3:+53208050 | Msa0817760:CDS |
| ACAAACTCATAACTGATAAA+AGG | 0.306264 | 5_3:+53206566 | Msa0817760:five_prime_UTR |
| CATTCCATAACTATAGGATT+TGG | 0.310810 | 5_3:+53208773 | Msa0817760:CDS |
| CTGCTCATATGCTCACTTAT+AGG | 0.316484 | 5_3:+53211999 | Msa0817760:CDS |
| ATTTGGTCTTTCCTTGGCCT+TGG | 0.319258 | 5_3:+53208790 | Msa0817760:CDS |
| TGGGTTACTATTGTAGGCTT+TGG | 0.321342 | 5_3:+53213563 | Msa0817760:CDS |
| AAATTGCAGTTTATCACCTT+TGG | 0.321885 | 5_3:+53211773 | Msa0817760:intron |
| GAATGGTTGAGATATAAATA+AGG | 0.323299 | 5_3:-53206701 | None:intergenic |
| ATCTGCAATTGCTGTCTATT+GGG | 0.331890 | 5_3:+53211386 | Msa0817760:CDS |
| ATCATATTCCAAGTCTTCTA+TGG | 0.331967 | 5_3:+53208074 | Msa0817760:CDS |
| ACCATTGCAGCCATTGTTCA+TGG | 0.339455 | 5_3:+53208841 | Msa0817760:CDS |
| ACTATTGTAGGCTTTGGATT+TGG | 0.339464 | 5_3:+53213569 | Msa0817760:CDS |
| GTACACCATTGTACTTTGTA+TGG | 0.339983 | 5_3:+53211804 | Msa0817760:CDS |
| TTCTCTCTTCTTCCTCGTAA+TGG | 0.341226 | 5_3:+53211444 | Msa0817760:CDS |
| TGGTTGGAAGCTGGTAGTTT+TGG | 0.342663 | 5_3:-53213668 | None:intergenic |
| GTTGAAAATGTGGTTCATTC+GGG | 0.342951 | 5_3:+53209410 | Msa0817760:CDS |
| CATCTGCAATTGCTGTCTAT+TGG | 0.344851 | 5_3:+53211385 | Msa0817760:CDS |
| ATTGCTGTCTATTGGGCCTT+TGG | 0.346170 | 5_3:+53211393 | Msa0817760:CDS |
| TACCTTCATTCCATAACTAT+AGG | 0.359384 | 5_3:+53208767 | Msa0817760:CDS |
| AACAAATTAAATGTTGGGTT+TGG | 0.362321 | 5_3:+53213900 | Msa0817760:three_prime_UTR |
| CCAAGTCTTCTATGGATTGA+TGG | 0.363039 | 5_3:+53208082 | Msa0817760:CDS |
| TCAATGCGTTTGTGGTGATA+TGG | 0.371914 | 5_3:+53213543 | Msa0817760:CDS |
| GTTTAGCTGTGCCTCGAATC+AGG | 0.375526 | 5_3:+53207703 | Msa0817760:CDS |
| GTGATATGGGTTACTATTGT+AGG | 0.377453 | 5_3:+53213557 | Msa0817760:CDS |
| TAGCCAACAAATTAAATGTT+GGG | 0.378538 | 5_3:+53213895 | Msa0817760:three_prime_UTR |
| GGTTGAAAATGTGGTTCATT+CGG | 0.380459 | 5_3:+53209409 | Msa0817760:intron |
| TGTCCAGCTTGGAATAACTT+TGG | 0.383837 | 5_3:-53213507 | None:intergenic |
| TACCTGTGGTGATACCAATA+TGG | 0.387905 | 5_3:+53211885 | Msa0817760:CDS |
| TATAGGATTTGGTCTTTCCT+TGG | 0.389353 | 5_3:+53208784 | Msa0817760:CDS |
| CCTAGCTGAGAGAATGAGTA+TGG | 0.392121 | 5_3:-53208038 | None:intergenic |
| TGTCTTAAATATGCTTGTTA+AGG | 0.392907 | 5_3:-53206903 | None:intergenic |
| TTGTGCTATGCAGGTTGCTC+AGG | 0.396612 | 5_3:+53208001 | Msa0817760:intron |
| GTCCAGCTTGGAATAACTTT+GGG | 0.396864 | 5_3:-53213506 | None:intergenic |
| GGTCCTTATTGGAAAGCAAT+TGG | 0.400537 | 5_3:+53208488 | Msa0817760:CDS |
| ACAATAATAGTATATCTATA+TGG | 0.402046 | 5_3:-53213780 | None:intergenic |
| GTGGTTCTGTTTATGATGCT+TGG | 0.403944 | 5_3:+53207681 | Msa0817760:CDS |
| CTCTTCTTCCTCGTAATGGC+TGG | 0.404036 | 5_3:+53211448 | Msa0817760:CDS |
| TAAATGTTGGGTTTGGTGAT+TGG | 0.412069 | 5_3:+53213907 | Msa0817760:three_prime_UTR |
| CGTAATGGCTGGCGCGATGC+TGG | 0.414035 | 5_3:+53211459 | Msa0817760:CDS |
| GTCCCATTAACTCAGCTGTA+GGG | 0.417428 | 5_3:+53211936 | Msa0817760:CDS |
| GCCCCTACAGCTGAGTTAAT+GGG | 0.419976 | 5_3:-53211938 | None:intergenic |
| TGCAGCCATTGTTCATGGTC+AGG | 0.424037 | 5_3:+53208846 | Msa0817760:CDS |
| AAAGGAGGAAGTCCTGCTTC+TGG | 0.424897 | 5_3:+53207635 | Msa0817760:CDS |
| AAGACCAAATCCTATAGTTA+TGG | 0.426171 | 5_3:-53208777 | None:intergenic |
| GAAAGTTGAAACTATGTGTT+TGG | 0.426438 | 5_3:-53206648 | None:intergenic |
| TAAGAGTTCAAAGAGATGTT+TGG | 0.430975 | 5_3:-53206616 | None:intergenic |
| ATTGTAGGCTTTGGATTTGG+AGG | 0.436501 | 5_3:+53213572 | Msa0817760:CDS |
| TCTATGGATTGATGGGTAGT+TGG | 0.437857 | 5_3:+53208090 | Msa0817760:CDS |
| TTGTACATAGTCTTATGTAT+TGG | 0.445534 | 5_3:-53213985 | None:intergenic |
| ACAAACATACTCTATACTTT+CGG | 0.447950 | 5_3:+53209467 | Msa0817760:CDS |
| TAGGCTTTGGATTTGGAGGG+TGG | 0.452037 | 5_3:+53213576 | Msa0817760:CDS |
| GCTTGTTCTGTGGAAAGAAT+TGG | 0.455666 | 5_3:-53206858 | None:intergenic |
| TGGGTTTGGTGATTGGCAAT+TGG | 0.456789 | 5_3:+53213914 | Msa0817760:three_prime_UTR |
| TATACTATTATTGTTAATGC+TGG | 0.459991 | 5_3:+53213789 | Msa0817760:three_prime_UTR |
| GAAGTGTTGGAAGGTTTACT+TGG | 0.460498 | 5_3:+53208467 | Msa0817760:CDS |
| CCATCAATCCATAGAAGACT+TGG | 0.461378 | 5_3:-53208082 | None:intergenic |
| TAATGCTGTTTCTTGCATGC+TGG | 0.464976 | 5_3:+53206789 | Msa0817760:five_prime_UTR |
| CAATGCGTTTGTGGTGATAT+GGG | 0.469730 | 5_3:+53213544 | Msa0817760:CDS |
| CGGGCCCAAAGAAAATGGTT+TGG | 0.471688 | 5_3:+53209429 | Msa0817760:CDS |
| ATAGCCAACAAATTAAATGT+TGG | 0.475609 | 5_3:+53213894 | Msa0817760:three_prime_UTR |
| GGTCCCATTAACTCAGCTGT+AGG | 0.479143 | 5_3:+53211935 | Msa0817760:CDS |
| AATGGTTGAGATATAAATAA+GGG | 0.481247 | 5_3:-53206700 | None:intergenic |
| AAAATGGTTTGGTATTTCAC+TGG | 0.481269 | 5_3:+53209440 | Msa0817760:CDS |
| GTGAGCATATGAGCAGAAGC+AGG | 0.483246 | 5_3:-53211992 | None:intergenic |
| GAGTTAATGGGACCAAAGAA+AGG | 0.483622 | 5_3:-53211926 | None:intergenic |
| ATCCTATAGTTATGGAATGA+AGG | 0.485031 | 5_3:-53208769 | None:intergenic |
| TAGTCTTATGTATTGGATAG+TGG | 0.486002 | 5_3:-53213978 | None:intergenic |
| GAAGAAAGAGAGGAAGAGAA+AGG | 0.487462 | 5_3:+53207617 | Msa0817760:CDS |
| TAGGTCTGCTTCAGCAAGAC+AGG | 0.490465 | 5_3:+53212018 | Msa0817760:CDS |
| TGTGCAGTGGTTTGAAGTGT+TGG | 0.492816 | 5_3:+53208454 | Msa0817760:intron |
| TATCAGTTATGAGTTTGTGT+TGG | 0.497636 | 5_3:-53206561 | None:intergenic |
| CATTGGAATGGTCTAAAAGT+TGG | 0.499848 | 5_3:-53211419 | None:intergenic |
| TTGTAGGCTTTGGATTTGGA+GGG | 0.502238 | 5_3:+53213573 | Msa0817760:CDS |
| AAAGAATTGGCAGAAAATAA+CGG | 0.505720 | 5_3:-53206845 | None:intergenic |
| CAGCATTAAGATCTGACAAA+AGG | 0.507063 | 5_3:-53206774 | None:intergenic |
| TTATTGGAAAGCAATTGGAT+TGG | 0.508834 | 5_3:+53208493 | Msa0817760:CDS |
| AAAGAGAAGAAAATTGAGTA+AGG | 0.509846 | 5_3:+53207324 | Msa0817760:five_prime_UTR |
| CAAGTCTTCTATGGATTGAT+GGG | 0.510221 | 5_3:+53208083 | Msa0817760:CDS |
| TACACCATTGTACTTTGTAT+GGG | 0.512262 | 5_3:+53211805 | Msa0817760:CDS |
| TGCCCAAAGTTATTCCAAGC+TGG | 0.514353 | 5_3:+53213504 | Msa0817760:CDS |
| CACGTTACTCTTCTCAATCA+AGG | 0.514539 | 5_3:-53207148 | None:intergenic |
| TGCATTGTGTGGTTGGAAGC+TGG | 0.515689 | 5_3:-53213677 | None:intergenic |
| CAGTGGTTTGAAGTGTTGGA+AGG | 0.520983 | 5_3:+53208458 | Msa0817760:intron |
| GAAAGTATAGAGTATGTTTG+TGG | 0.523457 | 5_3:-53209465 | None:intergenic |
| AATCTTGATGCTCATTCACC+AGG | 0.528000 | 5_3:+53211485 | Msa0817760:CDS |
| TAGATAGCTTTGAACTTCTG+AGG | 0.532486 | 5_3:-53211324 | None:intergenic |
| GTCTAAAAGTTGGTCACCAA+AGG | 0.541669 | 5_3:-53211409 | None:intergenic |
| AGGCTTTGGATTTGGAGGGT+GGG | 0.541795 | 5_3:+53213577 | Msa0817760:CDS |
| ACCTTGCACAAGCTATGAGC+TGG | 0.542123 | 5_3:-53208553 | None:intergenic |
| GACAGCAATTGCAGATGGTA+GGG | 0.544239 | 5_3:-53211379 | None:intergenic |
| GTATGTGATCAATGCGTTTG+TGG | 0.545120 | 5_3:+53213535 | Msa0817760:CDS |
| TCAGTGATGCATTGTGTGGT+TGG | 0.549027 | 5_3:-53213684 | None:intergenic |
| AGGAAGAAGAGAGAAAGCAT+TGG | 0.554247 | 5_3:-53211436 | None:intergenic |
| TCCCATTAACTCAGCTGTAG+GGG | 0.554568 | 5_3:+53211937 | Msa0817760:CDS |
| GAAAGAGAGGAAGAGAAAGG+AGG | 0.560980 | 5_3:+53207620 | Msa0817760:CDS |
| TAAATGATCACTTGGACAAG+AGG | 0.560995 | 5_3:+53208698 | Msa0817760:CDS |
| ACATACATTAATGTCCAGCT+TGG | 0.561694 | 5_3:-53213518 | None:intergenic |
| TTTGTATGGGAGAAAGTGAT+AGG | 0.563037 | 5_3:+53211818 | Msa0817760:CDS |
| ATACTACATAAATGATCACT+TGG | 0.572338 | 5_3:+53208690 | Msa0817760:CDS |
| AGTCTTAAATGCTTGTTCTG+TGG | 0.573579 | 5_3:-53206868 | None:intergenic |
| AACATACTCTATACTTTCGG+CGG | 0.574413 | 5_3:+53209470 | Msa0817760:CDS |
| AAATTCTTGAAACCAGAAGC+AGG | 0.578656 | 5_3:-53207647 | None:intergenic |
| AACCATATTGGTATCACCAC+AGG | 0.579597 | 5_3:-53211887 | None:intergenic |
| TGAGCTGAATGAAGAAAGAG+AGG | 0.580396 | 5_3:+53207607 | Msa0817760:CDS |
| ATGTGGTCATGCCAAGGCCA+AGG | 0.583435 | 5_3:-53208801 | None:intergenic |
| AGACAGCAATTGCAGATGGT+AGG | 0.583784 | 5_3:-53211380 | None:intergenic |
| TGAGCATATGAGCAGAAGCA+GGG | 0.587049 | 5_3:-53211991 | None:intergenic |
| ACCATGAACAATGGCTGCAA+TGG | 0.587711 | 5_3:-53208842 | None:intergenic |
| TGTTGAGTACAGAAGCAGAA+AGG | 0.592653 | 5_3:+53208139 | Msa0817760:CDS |
| GCATGACCACATACACAGCT+TGG | 0.597088 | 5_3:+53208812 | Msa0817760:CDS |
| GAAGAGAGAAAGCATTGGAA+TGG | 0.598851 | 5_3:-53211431 | None:intergenic |
| ATCACTTGGACAAGAGGACA+TGG | 0.603761 | 5_3:+53208704 | Msa0817760:CDS |
| ACATACTCTATACTTTCGGC+GGG | 0.607513 | 5_3:+53209471 | Msa0817760:CDS |
| AGTTAATGGGACCAAAGAAA+GGG | 0.609314 | 5_3:-53211925 | None:intergenic |
| CCATACTCATTCTCTCAGCT+AGG | 0.611915 | 5_3:+53208038 | Msa0817760:CDS |
| CAATAGACAGCAATTGCAGA+TGG | 0.612371 | 5_3:-53211384 | None:intergenic |
| GGATAACAGATCCAAAGAGA+AGG | 0.614630 | 5_3:-53208532 | None:intergenic |
| TCCAGCTCATAGCTTGTGCA+AGG | 0.620806 | 5_3:+53208552 | Msa0817760:CDS |
| CATATACCAAGCTGTGTATG+TGG | 0.628165 | 5_3:-53208818 | None:intergenic |
| GCATCGCGCCAGCCATTACG+AGG | 0.641519 | 5_3:-53211456 | None:intergenic |
| AAAGATTGCCTTGCTACACA+AGG | 0.641666 | 5_3:-53213816 | None:intergenic |
| GGGAAATCATGCATGCAATG+TGG | 0.656972 | 5_3:+53211298 | Msa0817760:intron |
| GGCACTAGCAAGGTTACCTG+TGG | 0.658670 | 5_3:+53211871 | Msa0817760:CDS |
| CTGGTGTTCCTTGTGTAGCA+AGG | 0.659070 | 5_3:+53213808 | Msa0817760:three_prime_UTR |
| CTGTGTATGTGGTCATGCCA+AGG | 0.659788 | 5_3:-53208807 | None:intergenic |
| TTCTCCCATACAAAGTACAA+TGG | 0.665968 | 5_3:-53211809 | None:intergenic |
| TGGTGTACAAGCAAATCCAA+AGG | 0.675091 | 5_3:-53211789 | None:intergenic |
| CAATGCATCACTGAAAAGTG+AGG | 0.679418 | 5_3:+53213693 | Msa0817760:exon |
| AAGGCAAAAGAAAAGAACCA+AGG | 0.703931 | 5_3:-53207129 | None:intergenic |
| ATTTACCTGACCATGAACAA+TGG | 0.733637 | 5_3:-53208851 | None:intergenic |
| ACAATGTTATCAGAGAAACA+AGG | 0.767084 | 5_3:+53207548 | Msa0817760:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTTTAATTTAATTTT+TGG | + | chr5_3:53207976-53207995 | Msa0817760:intron | 0.0% |
| !!! | ATATTTTTTTCTTATATTTG+GGG | - | chr5_3:53208216-53208235 | None:intergenic | 10.0% |
| !!! | GACTATTTTTAAAAAAATTT+AGG | + | chr5_3:53208389-53208408 | Msa0817760:intron | 10.0% |
| !! | TTATTTGATTATATAATTGA+AGG | + | chr5_3:53208604-53208623 | Msa0817760:intron | 10.0% |
| !! | TATGGTTTAATTAATTTAAT+CGG | - | chr5_3:53209269-53209288 | None:intergenic | 10.0% |
| !! | AAATTAGATTAAAAAAGATT+TGG | - | chr5_3:53209519-53209538 | None:intergenic | 10.0% |
| !! | AAGAAAAATGTATAAATAAA+GGG | - | chr5_3:53210251-53210270 | None:intergenic | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | - | chr5_3:53210252-53210271 | None:intergenic | 10.0% |
| !!! | TTATTTATTTTATAAATCCA+TGG | - | chr5_3:53210752-53210771 | None:intergenic | 10.0% |
| !! | ATTTGAATGATTTATAAAAT+TGG | - | chr5_3:53212903-53212922 | None:intergenic | 10.0% |
| !! | AAAAAAAATAAAGGTAAAAC+TGG | - | chr5_3:53206680-53206699 | None:intergenic | 15.0% |
| !! | AAATAAGGGAAAAAAAATAA+AGG | - | chr5_3:53206689-53206708 | None:intergenic | 15.0% |
| !!! | TATTTTTTTCTTATATTTGG+GGG | - | chr5_3:53208215-53208234 | None:intergenic | 15.0% |
| !! | TGATTAAATTAAAGTTTAAC+AGG | + | chr5_3:53209180-53209199 | Msa0817760:intron | 15.0% |
| !!! | TTTTGTTTAAATAAAAACCA+TGG | + | chr5_3:53209374-53209393 | Msa0817760:intron | 15.0% |
| !!! | ACAATATATTTTCTATACTA+TGG | + | chr5_3:53209633-53209652 | Msa0817760:intron | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | - | chr5_3:53210187-53210206 | None:intergenic | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | - | chr5_3:53210250-53210269 | None:intergenic | 15.0% |
| !!! | AATCAAAATAAGGTTAATTT+TGG | - | chr5_3:53210464-53210483 | None:intergenic | 15.0% |
| !!! | CAATTGTTTTAATCAAAATA+AGG | - | chr5_3:53210474-53210493 | None:intergenic | 15.0% |
| !!! | CTTATTTTGATTAAAACAAT+TGG | + | chr5_3:53210472-53210491 | Msa0817760:intron | 15.0% |
| !!! | AGTATATATTTTAACCTTTT+AGG | + | chr5_3:53210853-53210872 | Msa0817760:intron | 15.0% |
| !!! | GTATATATTTTAACCTTTTA+GGG | + | chr5_3:53210854-53210873 | Msa0817760:intron | 15.0% |
| !! | ATTTGACTAATAAACAAAAT+AGG | + | chr5_3:53210888-53210907 | Msa0817760:intron | 15.0% |
| !! | TTTGACTAATAAACAAAATA+GGG | + | chr5_3:53210889-53210908 | Msa0817760:intron | 15.0% |
| !! | AAAAACATGTTGAAATATTT+CGG | - | chr5_3:53211077-53211096 | None:intergenic | 15.0% |
| !! | TTAAAACAATTAGAATCAAA+GGG | - | chr5_3:53211538-53211557 | None:intergenic | 15.0% |
| !!! | TTTAAAACAATTAGAATCAA+AGG | - | chr5_3:53211539-53211558 | None:intergenic | 15.0% |
| !!! | CAAAATTTTAAAATAATCTC+CGG | - | chr5_3:53211646-53211665 | None:intergenic | 15.0% |
| !! | AATTTACATTTAAATAAAGC+AGG | - | chr5_3:53211758-53211777 | None:intergenic | 15.0% |
| !! | AATGAAACCATTAAAAATTT+AGG | + | chr5_3:53212223-53212242 | Msa0817760:intron | 15.0% |
| !! | ACAATAATAGTATATCTATA+TGG | - | chr5_3:53213783-53213802 | None:intergenic | 15.0% |
| !! | AATGGTTGAGATATAAATAA+GGG | - | chr5_3:53206703-53206722 | None:intergenic | 20.0% |
| !!! | ATTTTATAACACAAAAACAG+AGG | - | chr5_3:53207272-53207291 | None:intergenic | 20.0% |
| !!! | ATGAAGAAAAAAAGCATAAA+GGG | - | chr5_3:53207368-53207387 | None:intergenic | 20.0% |
| !!! | TTTATGCTTTTTTTCTTCAT+GGG | + | chr5_3:53207368-53207387 | Msa0817760:intron | 20.0% |
| !!! | ATTTTTTTCTTATATTTGGG+GGG | - | chr5_3:53208214-53208233 | None:intergenic | 20.0% |
| !! | TTTGATATCTCAAAATATTG+TGG | + | chr5_3:53208291-53208310 | Msa0817760:intron | 20.0% |
| !!! | TGGATTTAATAACAAGATTT+TGG | + | chr5_3:53208641-53208660 | Msa0817760:intron | 20.0% |
| !! | TTAGATTAAAAAAGATTTGG+TGG | - | chr5_3:53209516-53209535 | None:intergenic | 20.0% |
| !! | GTCAAAAAATTGTTAAAAAG+TGG | - | chr5_3:53209853-53209872 | None:intergenic | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | - | chr5_3:53210117-53210136 | None:intergenic | 20.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | - | chr5_3:53210227-53210246 | None:intergenic | 20.0% |
| !!! | ATTTCATTACCATTTTAAAG+TGG | - | chr5_3:53210427-53210446 | None:intergenic | 20.0% |
| !! | GTGTTATAAATGATAACAAA+AGG | + | chr5_3:53210509-53210528 | Msa0817760:intron | 20.0% |
| !!! | ATATTTTTTACATATGCACT+TGG | + | chr5_3:53210666-53210685 | Msa0817760:intron | 20.0% |
| !!! | GAAAACCTATTTTAAATTTG+AGG | + | chr5_3:53210966-53210985 | Msa0817760:intron | 20.0% |
| !!! | ATATGCCTCAAATTTAAAAT+AGG | - | chr5_3:53210974-53210993 | None:intergenic | 20.0% |
| !!! | GAAATATTTCAACATGTTTT+TGG | + | chr5_3:53211076-53211095 | Msa0817760:intron | 20.0% |
| !! | CAAAAATATAAATATGAACC+TGG | - | chr5_3:53211506-53211525 | None:intergenic | 20.0% |
| !! | TAAAACAATTAGAATCAAAG+GGG | - | chr5_3:53211537-53211556 | None:intergenic | 20.0% |
| !! | TACAAAAAGTTAAACCAAAT+TGG | - | chr5_3:53212157-53212176 | None:intergenic | 20.0% |
| !!! | CAATTTGCCTAAATTTTTAA+TGG | - | chr5_3:53212233-53212252 | None:intergenic | 20.0% |
| !! | ATTTATACTGCCATTAATAT+AGG | - | chr5_3:53212870-53212889 | None:intergenic | 20.0% |
| !! | GAATGATTTATAAAATTGGT+GGG | - | chr5_3:53212899-53212918 | None:intergenic | 20.0% |
| !! | TGAATGATTTATAAAATTGG+TGG | - | chr5_3:53212900-53212919 | None:intergenic | 20.0% |
| !!! | TTTATGATACATGATTAGTT+TGG | + | chr5_3:53212929-53212948 | Msa0817760:intron | 20.0% |
| !! | ACTAATAATGAGAATATGTT+AGG | - | chr5_3:53213116-53213135 | None:intergenic | 20.0% |
| !!! | TGTAGAATTTTAGTCAAATA+TGG | + | chr5_3:53213229-53213248 | Msa0817760:intron | 20.0% |
| !! | TATACTATTATTGTTAATGC+TGG | + | chr5_3:53213789-53213808 | Msa0817760:three_prime_UTR | 20.0% |
| !!! | TTGGTTTTTGATAATCATTT+TGG | + | chr5_3:53213851-53213870 | Msa0817760:three_prime_UTR | 20.0% |
| ! | ACAAACTCATAACTGATAAA+AGG | + | chr5_3:53206566-53206585 | Msa0817760:five_prime_UTR | 25.0% |
| ! | GAATGGTTGAGATATAAATA+AGG | - | chr5_3:53206704-53206723 | None:intergenic | 25.0% |
| ! | AAAGAATTGGCAGAAAATAA+CGG | - | chr5_3:53206848-53206867 | None:intergenic | 25.0% |
| !! | TGTCTTAAATATGCTTGTTA+AGG | - | chr5_3:53206906-53206925 | None:intergenic | 25.0% |
| ! | NNNNNNNAGGTCAATTGTTG+CGG | - | chr5_3:53206999-53207018 | None:intergenic | 25.0% |
| !!! | CTTTTTTGCTGTTTTTAATG+AGG | - | chr5_3:53207222-53207241 | None:intergenic | 25.0% |
| ! | CTCATTAAAAACAGCAAAAA+AGG | + | chr5_3:53207220-53207239 | Msa0817760:five_prime_UTR | 25.0% |
| ! | AAAGAGAAGAAAATTGAGTA+AGG | + | chr5_3:53207324-53207343 | Msa0817760:five_prime_UTR | 25.0% |
| !! | CATGAAGAAAAAAAGCATAA+AGG | - | chr5_3:53207369-53207388 | None:intergenic | 25.0% |
| !!! | CTTTATGCTTTTTTTCTTCA+TGG | + | chr5_3:53207367-53207386 | Msa0817760:intron | 25.0% |
| !!! | GATTTGATTTGATTTGTGTT+TGG | + | chr5_3:53207447-53207466 | Msa0817760:intron | 25.0% |
| !!! | TTTTTTTTTTACCTGATTCG+AGG | - | chr5_3:53207717-53207736 | None:intergenic | 25.0% |
| ! | ATACTACATAAATGATCACT+TGG | + | chr5_3:53208690-53208709 | Msa0817760:CDS | 25.0% |
| ! | AATTTAGTCCCTAAAATTGT+AGG | + | chr5_3:53208906-53208925 | Msa0817760:intron | 25.0% |
| !!! | AACTAGTTGATGCTAATTTT+TGG | - | chr5_3:53209116-53209135 | None:intergenic | 25.0% |
| !! | TCAATTTGAATGAGACTTTT+AGG | - | chr5_3:53209293-53209312 | None:intergenic | 25.0% |
| ! | TCAAATTGAATTTCAACATG+TGG | + | chr5_3:53209304-53209323 | Msa0817760:intron | 25.0% |
| ! | CAAATTGAATTTCAACATGT+GGG | + | chr5_3:53209305-53209324 | Msa0817760:intron | 25.0% |
| ! | AAATTGAATTTCAACATGTG+GGG | + | chr5_3:53209306-53209325 | Msa0817760:intron | 25.0% |
| !! | AATACCAAACCATTTTCTTT+GGG | - | chr5_3:53209436-53209455 | None:intergenic | 25.0% |
| !! | AAATACCAAACCATTTTCTT+TGG | - | chr5_3:53209437-53209456 | None:intergenic | 25.0% |
| ! | ACAAACATACTCTATACTTT+CGG | + | chr5_3:53209467-53209486 | Msa0817760:CDS | 25.0% |
| ! | ATAAGAAGTCCTCATTAAAA+TGG | - | chr5_3:53209674-53209693 | None:intergenic | 25.0% |
| ! | TAAGACAAAACAGTAAAATC+TGG | + | chr5_3:53209695-53209714 | Msa0817760:intron | 25.0% |
| ! | TTCTTATTGGTCAAAAACAA+TGG | - | chr5_3:53209933-53209952 | None:intergenic | 25.0% |
| ! | TCAACAAAGTTGTCATTAAA+TGG | + | chr5_3:53209971-53209990 | Msa0817760:intron | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | - | chr5_3:53210118-53210137 | None:intergenic | 25.0% |
| !!! | TGAAATGAGTCAGTTATTTT+GGG | - | chr5_3:53210139-53210158 | None:intergenic | 25.0% |
| !! | TTGAAATGAGTCAGTTATTT+TGG | - | chr5_3:53210140-53210159 | None:intergenic | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | - | chr5_3:53210228-53210247 | None:intergenic | 25.0% |
| ! | ATTAAAACAATTGGAAATGC+AGG | + | chr5_3:53210481-53210500 | Msa0817760:intron | 25.0% |
| ! | GGCATATTAGTAAAAATAGT+AGG | + | chr5_3:53210987-53211006 | Msa0817760:intron | 25.0% |
| !!! | ATATTTCAACATGTTTTTGG+AGG | + | chr5_3:53211079-53211098 | Msa0817760:intron | 25.0% |
| !!! | CTTTAAAATATGAACTGCAT+AGG | + | chr5_3:53211129-53211148 | Msa0817760:intron | 25.0% |
| ! | AAAAGCAGAGCATATATTTA+TGG | + | chr5_3:53211206-53211225 | Msa0817760:intron | 25.0% |
| ! | AAAGCAGAGCATATATTTAT+GGG | + | chr5_3:53211207-53211226 | Msa0817760:intron | 25.0% |
| ! | AAAAGTTCTCATATGTTTGT+TGG | - | chr5_3:53211564-53211583 | None:intergenic | 25.0% |
| !!! | TTTTAAAATAATCTCCGGAA+TGG | - | chr5_3:53211641-53211660 | None:intergenic | 25.0% |
| ! | ATTATAGCCAAAAACCATAT+TGG | - | chr5_3:53211902-53211921 | None:intergenic | 25.0% |
| ! | GTATGTATTGGATATGTTAT+AGG | - | chr5_3:53212080-53212099 | None:intergenic | 25.0% |
| ! | AGTAAAATCTCAGTATGTAT+TGG | - | chr5_3:53212092-53212111 | None:intergenic | 25.0% |
| ! | AATTATCAAATATTGATGCG+CGG | - | chr5_3:53212289-53212308 | None:intergenic | 25.0% |
| ! | CATAACCATCAACAAATTTA+TGG | - | chr5_3:53212632-53212651 | None:intergenic | 25.0% |
| !!! | CATAAATTTGTTGATGGTTA+TGG | + | chr5_3:53212630-53212649 | Msa0817760:intron | 25.0% |
| ! | TACTAAACAGACCTATAAAA+AGG | - | chr5_3:53213261-53213280 | None:intergenic | 25.0% |
| ! | TTGGCATTGTTTAGAAAAAT+CGG | - | chr5_3:53213410-53213429 | None:intergenic | 25.0% |
| ! | ATAGCCAACAAATTAAATGT+TGG | + | chr5_3:53213894-53213913 | Msa0817760:three_prime_UTR | 25.0% |
| ! | TAGCCAACAAATTAAATGTT+GGG | + | chr5_3:53213895-53213914 | Msa0817760:three_prime_UTR | 25.0% |
| !!! | AAACCCAACATTTAATTTGT+TGG | - | chr5_3:53213901-53213920 | None:intergenic | 25.0% |
| ! | AACAAATTAAATGTTGGGTT+TGG | + | chr5_3:53213900-53213919 | Msa0817760:three_prime_UTR | 25.0% |
| !!! | TTGTACATAGTCTTATGTAT+TGG | - | chr5_3:53213988-53214007 | None:intergenic | 25.0% |
| TATCAGTTATGAGTTTGTGT+TGG | - | chr5_3:53206564-53206583 | None:intergenic | 30.0% | |
| TAAGAGTTCAAAGAGATGTT+TGG | - | chr5_3:53206619-53206638 | None:intergenic | 30.0% | |
| GAAAGTTGAAACTATGTGTT+TGG | - | chr5_3:53206651-53206670 | None:intergenic | 30.0% | |
| ! | CACTGTTCTTTTCTTTCTAT+TGG | + | chr5_3:53206924-53206943 | Msa0817760:five_prime_UTR | 30.0% |
| ! | CTTTTGTGATGAAACTCAAT+AGG | - | chr5_3:53207308-53207327 | None:intergenic | 30.0% |
| GAAGAAAATTGAGTAAGGTT+AGG | + | chr5_3:53207329-53207348 | Msa0817760:intron | 30.0% | |
| ACAATGTTATCAGAGAAACA+AGG | + | chr5_3:53207548-53207567 | Msa0817760:exon | 30.0% | |
| ! | CTGGTTTCAAGAATTTTCTT+TGG | + | chr5_3:53207654-53207673 | Msa0817760:CDS | 30.0% |
| ! | TTCAAGAATTTTCTTTGGCA+TGG | + | chr5_3:53207659-53207678 | Msa0817760:CDS | 30.0% |
| ATCATATTCCAAGTCTTCTA+TGG | + | chr5_3:53208074-53208093 | Msa0817760:CDS | 30.0% | |
| CTTCAAAAATCATGTCATTC+AGG | + | chr5_3:53208178-53208197 | Msa0817760:CDS | 30.0% | |
| TGTGATCGGATTTATTATAG+CGG | + | chr5_3:53208323-53208342 | Msa0817760:intron | 30.0% | |
| TGTTTGAAGAAAGACATTGA+TGG | + | chr5_3:53208418-53208437 | Msa0817760:intron | 30.0% | |
| !! | TTTGATTTCATTTTGTGCAG+TGG | + | chr5_3:53208441-53208460 | Msa0817760:intron | 30.0% |
| AATCCAATTGCTTTCCAATA+AGG | - | chr5_3:53208494-53208513 | None:intergenic | 30.0% | |
| TTATTGGAAAGCAATTGGAT+TGG | + | chr5_3:53208493-53208512 | Msa0817760:CDS | 30.0% | |
| TACCTTCATTCCATAACTAT+AGG | + | chr5_3:53208767-53208786 | Msa0817760:CDS | 30.0% | |
| ATCCTATAGTTATGGAATGA+AGG | - | chr5_3:53208772-53208791 | None:intergenic | 30.0% | |
| CATTCCATAACTATAGGATT+TGG | + | chr5_3:53208773-53208792 | Msa0817760:CDS | 30.0% | |
| AAGACCAAATCCTATAGTTA+TGG | - | chr5_3:53208780-53208799 | None:intergenic | 30.0% | |
| ! | ATTCCACTCCTACAATTTTA+GGG | - | chr5_3:53208917-53208936 | None:intergenic | 30.0% |
| ! | TATTCCACTCCTACAATTTT+AGG | - | chr5_3:53208918-53208937 | None:intergenic | 30.0% |
| !! | TCATTTTAGTACATGTGAGT+TGG | - | chr5_3:53208999-53209018 | None:intergenic | 30.0% |
| !!! | GATGCTAATTTTTGGTTCAA+CGG | - | chr5_3:53209108-53209127 | None:intergenic | 30.0% |
| !!! | TGAATGAGACTTTTAGGTTA+TGG | - | chr5_3:53209287-53209306 | None:intergenic | 30.0% |
| !!! | CATTTTTTGGTTAAGGAAGT+GGG | + | chr5_3:53209331-53209350 | Msa0817760:intron | 30.0% |
| !!! | ATTTTTTGGTTAAGGAAGTG+GGG | + | chr5_3:53209332-53209351 | Msa0817760:intron | 30.0% |
| !! | ATTTTTGCAGGTTGAAAATG+TGG | + | chr5_3:53209400-53209419 | Msa0817760:intron | 30.0% |
| !! | AAAATGGTTTGGTATTTCAC+TGG | + | chr5_3:53209440-53209459 | Msa0817760:CDS | 30.0% |
| ! | GAAAGTATAGAGTATGTTTG+TGG | - | chr5_3:53209468-53209487 | None:intergenic | 30.0% |
| AGTAAGAGAAGTTTATTGCA+CGG | + | chr5_3:53209610-53209629 | Msa0817760:intron | 30.0% | |
| AAAACAATGGAGAGAGAAAA+AGG | - | chr5_3:53209920-53209939 | None:intergenic | 30.0% | |
| !! | TTGGTTTTCTCACTTCTTAT+TGG | - | chr5_3:53209946-53209965 | None:intergenic | 30.0% |
| AATAAGAAGTGAGAAAACCA+AGG | + | chr5_3:53209945-53209964 | Msa0817760:intron | 30.0% | |
| TGTATAAATAAAGGGGAAAG+TGG | - | chr5_3:53210243-53210262 | None:intergenic | 30.0% | |
| !! | CATTGTTTGCCACTTTAAAA+TGG | + | chr5_3:53210415-53210434 | Msa0817760:intron | 30.0% |
| ! | TGTTTAAGGTATCATCTATG+AGG | + | chr5_3:53210693-53210712 | Msa0817760:intron | 30.0% |
| AATAGAGAAGTTTCCCAATA+AGG | - | chr5_3:53210809-53210828 | None:intergenic | 30.0% | |
| TATTGGGAAACTTCTCTATT+AGG | + | chr5_3:53210809-53210828 | Msa0817760:intron | 30.0% | |
| ATGCATTGTATTACCCTAAA+AGG | - | chr5_3:53210870-53210889 | None:intergenic | 30.0% | |
| GAAAACAATTCCAACTCATT+TGG | + | chr5_3:53210926-53210945 | Msa0817760:intron | 30.0% | |
| GTAAAAATAGTAGGAATGTG+AGG | + | chr5_3:53210996-53211015 | Msa0817760:intron | 30.0% | |
| !!! | ACATGTTTTTGGAGGTTTTA+CGG | + | chr5_3:53211087-53211106 | Msa0817760:intron | 30.0% |
| TGTTTGAGTATACACTAACA+TGG | + | chr5_3:53211255-53211274 | Msa0817760:intron | 30.0% | |
| ACCATGTGACTATTATTACA+GGG | + | chr5_3:53211278-53211297 | Msa0817760:intron | 30.0% | |
| AAATTGCAGTTTATCACCTT+TGG | + | chr5_3:53211773-53211792 | Msa0817760:intron | 30.0% | |
| TACACCATTGTACTTTGTAT+GGG | + | chr5_3:53211805-53211824 | Msa0817760:CDS | 30.0% | |
| !! | ACACAAAGAGCATATTTTTG+AGG | + | chr5_3:53211849-53211868 | Msa0817760:CDS | 30.0% |
| !! | CACAAAGAGCATATTTTTGA+GGG | + | chr5_3:53211850-53211869 | Msa0817760:CDS | 30.0% |
| TAGGAAAAAAGACAAAGATG+TGG | - | chr5_3:53212061-53212080 | None:intergenic | 30.0% | |
| !!! | TCACTATTTTGACATGTTGT+AGG | + | chr5_3:53212130-53212149 | Msa0817760:intron | 30.0% |
| GTATTGTGAAATGCTTTGAT+AGG | + | chr5_3:53212252-53212271 | Msa0817760:intron | 30.0% | |
| !! | CTTTTAGAAGTAGAAGCTTA+TGG | + | chr5_3:53212327-53212346 | Msa0817760:intron | 30.0% |
| CTTCAATTCGACAAAAACAT+GGG | - | chr5_3:53212458-53212477 | None:intergenic | 30.0% | |
| !! | ACTATGAGTTTCTAGTTCAA+AGG | + | chr5_3:53212516-53212535 | Msa0817760:intron | 30.0% |
| !! | CTATGAGTTTCTAGTTCAAA+GGG | + | chr5_3:53212517-53212536 | Msa0817760:intron | 30.0% |
| !! | TATGAGTTTCTAGTTCAAAG+GGG | + | chr5_3:53212518-53212537 | Msa0817760:intron | 30.0% |
| AATTAAATAATTGTCCACCC+TGG | + | chr5_3:53212573-53212592 | Msa0817760:intron | 30.0% | |
| ACCATCAACAAATTTATGGT+GGG | - | chr5_3:53212628-53212647 | None:intergenic | 30.0% | |
| AACCATCAACAAATTTATGG+TGG | - | chr5_3:53212629-53212648 | None:intergenic | 30.0% | |
| !! | ATTTGTTGATGGTTATGGAA+AGG | + | chr5_3:53212635-53212654 | Msa0817760:intron | 30.0% |
| GAAGTGACTTCCTATATTAA+TGG | + | chr5_3:53212857-53212876 | Msa0817760:intron | 30.0% | |
| ATAACTGAATGACAAAGAAG+TGG | - | chr5_3:53212957-53212976 | None:intergenic | 30.0% | |
| TGTGACTTAAATAGTACCAA+TGG | - | chr5_3:53212999-53213018 | None:intergenic | 30.0% | |
| ! | TTAGGTTGTGTTAAAATGTG+GGG | - | chr5_3:53213024-53213043 | None:intergenic | 30.0% |
| ! | GTTAGGTTGTGTTAAAATGT+GGG | - | chr5_3:53213025-53213044 | None:intergenic | 30.0% |
| ! | TGTTAGGTTGTGTTAAAATG+TGG | - | chr5_3:53213026-53213045 | None:intergenic | 30.0% |
| ACTTCAAACCATAACAATTG+AGG | + | chr5_3:53213182-53213201 | Msa0817760:intron | 30.0% | |
| AACCATAACAATTGAGGTAA+TGG | + | chr5_3:53213188-53213207 | Msa0817760:intron | 30.0% | |
| !! | TATGGTTGATGCCTTTTTAT+AGG | + | chr5_3:53213247-53213266 | Msa0817760:intron | 30.0% |
| !! | TGTCAATCGTAGTTGATTTT+GGG | - | chr5_3:53213326-53213345 | None:intergenic | 30.0% |
| CATTGTTTAGAAAAATCGGA+CGG | - | chr5_3:53213406-53213425 | None:intergenic | 30.0% | |
| ! | TGCCAATATTCGATTTGATT+CGG | + | chr5_3:53213424-53213443 | Msa0817760:intron | 30.0% |
| AACCGAATCAAATCGAATAT+TGG | - | chr5_3:53213429-53213448 | None:intergenic | 30.0% | |
| ! | ATCAAACAAGTTGACACATT+TGG | + | chr5_3:53213617-53213636 | Msa0817760:CDS | 30.0% |
| GTGAGGAAGAAAAAAAACTA+TGG | + | chr5_3:53213710-53213729 | Msa0817760:three_prime_UTR | 30.0% | |
| GGTGATTAAACAAAAAGAGA+GGG | - | chr5_3:53213762-53213781 | None:intergenic | 30.0% | |
| TGGTGATTAAACAAAAAGAG+AGG | - | chr5_3:53213763-53213782 | None:intergenic | 30.0% | |
| !! | TAGTCTTATGTATTGGATAG+TGG | - | chr5_3:53213981-53214000 | None:intergenic | 30.0% |
| CAGCATTAAGATCTGACAAA+AGG | - | chr5_3:53206777-53206796 | None:intergenic | 35.0% | |
| AGTCTTAAATGCTTGTTCTG+TGG | - | chr5_3:53206871-53206890 | None:intergenic | 35.0% | |
| !!! | ATAGTGTGGTTTTGTTACCT+TGG | + | chr5_3:53207112-53207131 | Msa0817760:five_prime_UTR | 35.0% |
| AAGGCAAAAGAAAAGAACCA+AGG | - | chr5_3:53207132-53207151 | None:intergenic | 35.0% | |
| !!! | TGCTTTTTTTCTTCATGGGT+TGG | + | chr5_3:53207372-53207391 | Msa0817760:intron | 35.0% |
| AAATTCTTGAAACCAGAAGC+AGG | - | chr5_3:53207650-53207669 | None:intergenic | 35.0% | |
| ! | AAGAATTTTCTTTGGCATGG+TGG | + | chr5_3:53207662-53207681 | Msa0817760:CDS | 35.0% |
| TTTAGATTTCGACGCATGTT+TGG | + | chr5_3:53207743-53207762 | Msa0817760:intron | 35.0% | |
| CAGTGAGTTTAACGAAATCA+CGG | - | chr5_3:53207865-53207884 | None:intergenic | 35.0% | |
| ATGATGAGACTGATTGGATA+TGG | - | chr5_3:53207893-53207912 | None:intergenic | 35.0% | |
| TATCCAATCAGTCTCATCAT+TGG | + | chr5_3:53207893-53207912 | Msa0817760:intron | 35.0% | |
| ! | CTTTGACTGTGACCTATTTT+TGG | + | chr5_3:53207926-53207945 | Msa0817760:intron | 35.0% |
| !!! | TTTTTGGTTTTGTGCTATGC+AGG | + | chr5_3:53207992-53208011 | Msa0817760:intron | 35.0% |
| ! | CAAGTCTTCTATGGATTGAT+GGG | + | chr5_3:53208083-53208102 | Msa0817760:CDS | 35.0% |
| AAAATCATGTCATTCAGGTG+AGG | + | chr5_3:53208183-53208202 | Msa0817760:intron | 35.0% | |
| ! | TAAATCCGATCACATCGATT+TGG | - | chr5_3:53208317-53208336 | None:intergenic | 35.0% |
| AAGGTTTACTTGGTCCTTAT+TGG | + | chr5_3:53208477-53208496 | Msa0817760:CDS | 35.0% | |
| TGAAGGACGATATTGAATTG+TGG | + | chr5_3:53208621-53208640 | Msa0817760:intron | 35.0% | |
| TAAATGATCACTTGGACAAG+AGG | + | chr5_3:53208698-53208717 | Msa0817760:CDS | 35.0% | |
| ! | AGGACATGGACTTACATTTT+TGG | + | chr5_3:53208718-53208737 | Msa0817760:CDS | 35.0% |
| ! | TATAGGATTTGGTCTTTCCT+TGG | + | chr5_3:53208784-53208803 | Msa0817760:CDS | 35.0% |
| ATTTACCTGACCATGAACAA+TGG | - | chr5_3:53208854-53208873 | None:intergenic | 35.0% | |
| GCATCAACTAGTTCATTAGT+TGG | + | chr5_3:53209123-53209142 | Msa0817760:intron | 35.0% | |
| CGGTTCAACTATGATTGAAT+CGG | - | chr5_3:53209249-53209268 | None:intergenic | 35.0% | |
| CCACTTCCTTAACCAAAAAA+TGG | - | chr5_3:53209333-53209352 | None:intergenic | 35.0% | |
| !!! | CCATTTTTTGGTTAAGGAAG+TGG | + | chr5_3:53209330-53209349 | Msa0817760:intron | 35.0% |
| !! | AAACCATGGTTCATTTTTGC+AGG | + | chr5_3:53209388-53209407 | Msa0817760:intron | 35.0% |
| GGTTGAAAATGTGGTTCATT+CGG | + | chr5_3:53209409-53209428 | Msa0817760:intron | 35.0% | |
| GTTGAAAATGTGGTTCATTC+GGG | + | chr5_3:53209410-53209429 | Msa0817760:CDS | 35.0% | |
| AACATACTCTATACTTTCGG+CGG | + | chr5_3:53209470-53209489 | Msa0817760:CDS | 35.0% | |
| !! | CTTTTGCCTCCATTTTAATG+AGG | + | chr5_3:53209662-53209681 | Msa0817760:intron | 35.0% |
| AGAAGTCCTCATTAAAATGG+AGG | - | chr5_3:53209671-53209690 | None:intergenic | 35.0% | |
| TACACTATTGTCTTGGCTAA+CGG | + | chr5_3:53209735-53209754 | Msa0817760:intron | 35.0% | |
| TGAGGTAAAATGTCTCTTAG+GGG | - | chr5_3:53210033-53210052 | None:intergenic | 35.0% | |
| GTGAGGTAAAATGTCTCTTA+GGG | - | chr5_3:53210034-53210053 | None:intergenic | 35.0% | |
| AAATTAGTACACACATCGTG+AGG | - | chr5_3:53210051-53210070 | None:intergenic | 35.0% | |
| AGAAAATGGGTCAGTTATTC+CGG | - | chr5_3:53210104-53210123 | None:intergenic | 35.0% | |
| AAACAATTGGAAATGCAGGA+TGG | + | chr5_3:53210485-53210504 | Msa0817760:intron | 35.0% | |
| ! | ATGCACTTGGTTCTTGTTTA+AGG | + | chr5_3:53210679-53210698 | Msa0817760:intron | 35.0% |
| GGTATCATCTATGAGGAAAT+TGG | + | chr5_3:53210700-53210719 | Msa0817760:intron | 35.0% | |
| TACACTGTTCTTTGCCTTAT+TGG | + | chr5_3:53210792-53210811 | Msa0817760:intron | 35.0% | |
| ! | ACACTGTTCTTTGCCTTATT+GGG | + | chr5_3:53210793-53210812 | Msa0817760:intron | 35.0% |
| TGTGATATGTCCAAATGAGT+TGG | - | chr5_3:53210939-53210958 | None:intergenic | 35.0% | |
| TCATAGGGTGAGAAAAGTAA+TGG | - | chr5_3:53211022-53211041 | None:intergenic | 35.0% | |
| !! | ATTACTTTTCTCACCCTATG+AGG | + | chr5_3:53211021-53211040 | Msa0817760:intron | 35.0% |
| !!! | CATGTTTTTGGAGGTTTTAC+GGG | + | chr5_3:53211088-53211107 | Msa0817760:intron | 35.0% |
| GACCATGTGACTATTATTAC+AGG | + | chr5_3:53211277-53211296 | Msa0817760:intron | 35.0% | |
| TCCCTGTAATAATAGTCACA+TGG | - | chr5_3:53211282-53211301 | None:intergenic | 35.0% | |
| !! | TAGATAGCTTTGAACTTCTG+AGG | - | chr5_3:53211327-53211346 | None:intergenic | 35.0% |
| ATCTGCAATTGCTGTCTATT+GGG | + | chr5_3:53211386-53211405 | Msa0817760:CDS | 35.0% | |
| CATTGGAATGGTCTAAAAGT+TGG | - | chr5_3:53211422-53211441 | None:intergenic | 35.0% | |
| GTACACCATTGTACTTTGTA+TGG | + | chr5_3:53211804-53211823 | Msa0817760:CDS | 35.0% | |
| TTCTCCCATACAAAGTACAA+TGG | - | chr5_3:53211812-53211831 | None:intergenic | 35.0% | |
| TTTGTATGGGAGAAAGTGAT+AGG | + | chr5_3:53211818-53211837 | Msa0817760:CDS | 35.0% | |
| ! | GGTGATACCAATATGGTTTT+TGG | + | chr5_3:53211892-53211911 | Msa0817760:CDS | 35.0% |
| GCTATAATCTTCCCTTTCTT+TGG | + | chr5_3:53211914-53211933 | Msa0817760:CDS | 35.0% | |
| AGTTAATGGGACCAAAGAAA+GGG | - | chr5_3:53211928-53211947 | None:intergenic | 35.0% | |
| TGTGAAATGCTTTGATAGGA+CGG | + | chr5_3:53212256-53212275 | Msa0817760:intron | 35.0% | |
| !! | GTACTGGTTTGACTAAAACA+TGG | + | chr5_3:53212388-53212407 | Msa0817760:intron | 35.0% |
| !!! | AGTTTTGAGGCACATATGTT+CGG | - | chr5_3:53212418-53212437 | None:intergenic | 35.0% |
| GCTTCAATTCGACAAAAACA+TGG | - | chr5_3:53212459-53212478 | None:intergenic | 35.0% | |
| TTACGGCTAAGAAAGTGATT+TGG | - | chr5_3:53212485-53212504 | None:intergenic | 35.0% | |
| CCATATTGATAGATAGTCCA+GGG | - | chr5_3:53212593-53212612 | None:intergenic | 35.0% | |
| ACCATATTGATAGATAGTCC+AGG | - | chr5_3:53212594-53212613 | None:intergenic | 35.0% | |
| !! | CAAATTTATGGTGGGTTCTA+CGG | - | chr5_3:53212620-53212639 | None:intergenic | 35.0% |
| !! | ACCCACCATAAATTTGTTGA+TGG | + | chr5_3:53212624-53212643 | Msa0817760:intron | 35.0% |
| ATGGTTATGGAAAGGTTAGA+TGG | + | chr5_3:53212643-53212662 | Msa0817760:intron | 35.0% | |
| TGGTTATGGAAAGGTTAGAT+GGG | + | chr5_3:53212644-53212663 | Msa0817760:intron | 35.0% | |
| !! | ATTCGTTTGCTGTACTACTA+CGG | - | chr5_3:53212824-53212843 | None:intergenic | 35.0% |
| CAAACGAATTATATGCTGCT+TGG | + | chr5_3:53212835-53212854 | Msa0817760:intron | 35.0% | |
| CTATAGTCATACAGTACCAT+TGG | + | chr5_3:53212980-53212999 | Msa0817760:intron | 35.0% | |
| !! | ACACTTGAGTTGATAGTGTT+AGG | - | chr5_3:53213042-53213061 | None:intergenic | 35.0% |
| GACCATTACCTCAATTGTTA+TGG | - | chr5_3:53213193-53213212 | None:intergenic | 35.0% | |
| !! | CTGTCAATCGTAGTTGATTT+TGG | - | chr5_3:53213327-53213346 | None:intergenic | 35.0% |
| ATCAACTACGATTGACAGTT+TGG | + | chr5_3:53213329-53213348 | Msa0817760:intron | 35.0% | |
| GATCATAGTTCAATGTGGTT+CGG | + | chr5_3:53213370-53213389 | Msa0817760:intron | 35.0% | |
| ACATACATTAATGTCCAGCT+TGG | - | chr5_3:53213521-53213540 | None:intergenic | 35.0% | |
| ! | GTGATATGGGTTACTATTGT+AGG | + | chr5_3:53213557-53213576 | Msa0817760:CDS | 35.0% |
| !! | ACTATTGTAGGCTTTGGATT+TGG | + | chr5_3:53213569-53213588 | Msa0817760:CDS | 35.0% |
| !! | TAAATGTTGGGTTTGGTGAT+TGG | + | chr5_3:53213907-53213926 | Msa0817760:three_prime_UTR | 35.0% |
| ! | TGTGCTGTGTGTTTTCTGTT+TGG | - | chr5_3:53206538-53206557 | None:intergenic | 40.0% |
| AGAGAGAGAGAGTTGAAGAA+TGG | - | chr5_3:53206721-53206740 | None:intergenic | 40.0% | |
| !! | TAATGCTGTTTCTTGCATGC+TGG | + | chr5_3:53206789-53206808 | Msa0817760:five_prime_UTR | 40.0% |
| GCTTGTTCTGTGGAAAGAAT+TGG | - | chr5_3:53206861-53206880 | None:intergenic | 40.0% | |
| CACGTTACTCTTCTCAATCA+AGG | - | chr5_3:53207151-53207170 | None:intergenic | 40.0% | |
| TGAGCTGAATGAAGAAAGAG+AGG | + | chr5_3:53207607-53207626 | Msa0817760:CDS | 40.0% | |
| GAAGAAAGAGAGGAAGAGAA+AGG | + | chr5_3:53207617-53207636 | Msa0817760:CDS | 40.0% | |
| ! | GTGGTTCTGTTTATGATGCT+TGG | + | chr5_3:53207681-53207700 | Msa0817760:CDS | 40.0% |
| GTTCCAATGATGAGACTGAT+TGG | - | chr5_3:53207899-53207918 | None:intergenic | 40.0% | |
| !!! | TGTGACCTATTTTTGGTGTG+TGG | + | chr5_3:53207933-53207952 | Msa0817760:intron | 40.0% |
| CTCTTCCACACACCAAAAAT+AGG | - | chr5_3:53207941-53207960 | None:intergenic | 40.0% | |
| TCTCAGCTAGGAATGATTTC+AGG | + | chr5_3:53208050-53208069 | Msa0817760:CDS | 40.0% | |
| CCATCAATCCATAGAAGACT+TGG | - | chr5_3:53208085-53208104 | None:intergenic | 40.0% | |
| ! | CCAAGTCTTCTATGGATTGA+TGG | + | chr5_3:53208082-53208101 | Msa0817760:CDS | 40.0% |
| ! | TCTATGGATTGATGGGTAGT+TGG | + | chr5_3:53208090-53208109 | Msa0817760:CDS | 40.0% |
| TGTTGAGTACAGAAGCAGAA+AGG | + | chr5_3:53208139-53208158 | Msa0817760:CDS | 40.0% | |
| CGGAGACATAAAAAGTCTCA+TGG | + | chr5_3:53208343-53208362 | Msa0817760:intron | 40.0% | |
| !! | GAAGTGTTGGAAGGTTTACT+TGG | + | chr5_3:53208467-53208486 | Msa0817760:CDS | 40.0% |
| GGTCCTTATTGGAAAGCAAT+TGG | + | chr5_3:53208488-53208507 | Msa0817760:CDS | 40.0% | |
| AACTGCACTTTCCTTCTCTT+TGG | + | chr5_3:53208521-53208540 | Msa0817760:CDS | 40.0% | |
| GGATAACAGATCCAAAGAGA+AGG | - | chr5_3:53208535-53208554 | None:intergenic | 40.0% | |
| CATATACCAAGCTGTGTATG+TGG | - | chr5_3:53208821-53208840 | None:intergenic | 40.0% | |
| AGTCCCTAAAATTGTAGGAG+TGG | + | chr5_3:53208911-53208930 | Msa0817760:intron | 40.0% | |
| !! | TCAACGGATTGAATTGTGCT+CGG | - | chr5_3:53209092-53209111 | None:intergenic | 40.0% |
| TGCATGATCATATCGTAGTC+TGG | + | chr5_3:53209150-53209169 | Msa0817760:intron | 40.0% | |
| ! | TCAACCACAGTCGATTCAAT+CGG | + | chr5_3:53209214-53209233 | Msa0817760:intron | 40.0% |
| AAAACCGATTGAATCGACTG+TGG | - | chr5_3:53209221-53209240 | None:intergenic | 40.0% | |
| !!! | AACATGTGGGGTCCATTTTT+TGG | + | chr5_3:53209318-53209337 | Msa0817760:intron | 40.0% |
| !!! | TGGGGTCCATTTTTTGGTTA+AGG | + | chr5_3:53209324-53209343 | Msa0817760:intron | 40.0% |
| CAACCTGCAAAAATGAACCA+TGG | - | chr5_3:53209394-53209413 | None:intergenic | 40.0% | |
| ACATACTCTATACTTTCGGC+GGG | + | chr5_3:53209471-53209490 | Msa0817760:CDS | 40.0% | |
| CACTCACTACACTATTGTCT+TGG | + | chr5_3:53209728-53209747 | Msa0817760:intron | 40.0% | |
| AGAGAGAAAAAGGAAGAGAG+AGG | - | chr5_3:53209910-53209929 | None:intergenic | 40.0% | |
| GACAACTTTGTTGACAACCT+TGG | - | chr5_3:53209965-53209984 | None:intergenic | 40.0% | |
| TAAAATGTCTCTTAGGGGGA+AGG | - | chr5_3:53210028-53210047 | None:intergenic | 40.0% | |
| GAGGTAAAATGTCTCTTAGG+GGG | - | chr5_3:53210032-53210051 | None:intergenic | 40.0% | |
| CGTGAGGTAAAATGTCTCTT+AGG | - | chr5_3:53210035-53210054 | None:intergenic | 40.0% | |
| GAAAATGGGTCAGTTATTCC+GGG | - | chr5_3:53210103-53210122 | None:intergenic | 40.0% | |
| AATCTGTGTGAAATGAGCCA+AGG | + | chr5_3:53210271-53210290 | Msa0817760:intron | 40.0% | |
| ATCTGTGTGAAATGAGCCAA+GGG | + | chr5_3:53210272-53210291 | Msa0817760:intron | 40.0% | |
| AGCCAAGGGGTCAAATAAAT+TGG | + | chr5_3:53210286-53210305 | Msa0817760:intron | 40.0% | |
| GCCAAGGGGTCAAATAAATT+GGG | + | chr5_3:53210287-53210306 | Msa0817760:intron | 40.0% | |
| TCCCAATTTATTTGACCCCT+TGG | - | chr5_3:53210291-53210310 | None:intergenic | 40.0% | |
| AGGGGTCAAATAAATTGGGA+CGG | + | chr5_3:53210291-53210310 | Msa0817760:intron | 40.0% | |
| GTCAAATAAATTGGGACGGA+GGG | + | chr5_3:53210295-53210314 | Msa0817760:intron | 40.0% | |
| !! | GAGGGAGTACTAGTTATCTA+GGG | + | chr5_3:53210313-53210332 | Msa0817760:intron | 40.0% |
| !! | AGGGAGTACTAGTTATCTAG+GGG | + | chr5_3:53210314-53210333 | Msa0817760:intron | 40.0% |
| AGGTTCTCGTACGTTCTATT+CGG | + | chr5_3:53211041-53211060 | Msa0817760:intron | 40.0% | |
| ! | TACGGGATTTTTACGCAGTT+CGG | + | chr5_3:53211105-53211124 | Msa0817760:intron | 40.0% |
| CAATAGACAGCAATTGCAGA+TGG | - | chr5_3:53211387-53211406 | None:intergenic | 40.0% | |
| CATCTGCAATTGCTGTCTAT+TGG | + | chr5_3:53211385-53211404 | Msa0817760:CDS | 40.0% | |
| ! | GTCTAAAAGTTGGTCACCAA+AGG | - | chr5_3:53211412-53211431 | None:intergenic | 40.0% |
| !! | GAAGAGAGAAAGCATTGGAA+TGG | - | chr5_3:53211434-53211453 | None:intergenic | 40.0% |
| ! | AGGAAGAAGAGAGAAAGCAT+TGG | - | chr5_3:53211439-53211458 | None:intergenic | 40.0% |
| TTCTCTCTTCTTCCTCGTAA+TGG | + | chr5_3:53211444-53211463 | Msa0817760:CDS | 40.0% | |
| AATCTTGATGCTCATTCACC+AGG | + | chr5_3:53211485-53211504 | Msa0817760:CDS | 40.0% | |
| ! | GCCTCAAGTATTTTCCATTC+CGG | + | chr5_3:53211624-53211643 | Msa0817760:intron | 40.0% |
| TCCGGAATGGAAAATACTTG+AGG | - | chr5_3:53211628-53211647 | None:intergenic | 40.0% | |
| TGGTGTACAAGCAAATCCAA+AGG | - | chr5_3:53211792-53211811 | None:intergenic | 40.0% | |
| !!! | TATTTTTGAGGGCACTAGCA+AGG | + | chr5_3:53211861-53211880 | Msa0817760:CDS | 40.0% |
| TACCTGTGGTGATACCAATA+TGG | + | chr5_3:53211885-53211904 | Msa0817760:CDS | 40.0% | |
| AACCATATTGGTATCACCAC+AGG | - | chr5_3:53211890-53211909 | None:intergenic | 40.0% | |
| GAGTTAATGGGACCAAAGAA+AGG | - | chr5_3:53211929-53211948 | None:intergenic | 40.0% | |
| CTGCTCATATGCTCACTTAT+AGG | + | chr5_3:53211999-53212018 | Msa0817760:CDS | 40.0% | |
| AGACAAAGATGTGGAGAGAT+TGG | - | chr5_3:53212052-53212071 | None:intergenic | 40.0% | |
| GACATGTTGTAGGTCCAATT+TGG | + | chr5_3:53212140-53212159 | Msa0817760:intron | 40.0% | |
| !! | CAATCACGAGTTGAGTTTTG+AGG | - | chr5_3:53212431-53212450 | None:intergenic | 40.0% |
| !! | GGCTAAGAAAGTGATTTGGT+CGG | - | chr5_3:53212481-53212500 | None:intergenic | 40.0% |
| CATAGTCCTTCTCGTCTTTA+CGG | - | chr5_3:53212502-53212521 | None:intergenic | 40.0% | |
| TATTGATAGATAGTCCAGGG+TGG | - | chr5_3:53212590-53212609 | None:intergenic | 40.0% | |
| CCCTGGACTATCTATCAATA+TGG | + | chr5_3:53212590-53212609 | Msa0817760:intron | 40.0% | |
| ! | TGATCACTGAGTACTGTGTA+AGG | - | chr5_3:53213065-53213084 | None:intergenic | 40.0% |
| TATGATCGCTAGTGCACAAA+CGG | - | chr5_3:53213357-53213376 | None:intergenic | 40.0% | |
| CTAGCGATCATAGTTCAATG+TGG | + | chr5_3:53213365-53213384 | Msa0817760:intron | 40.0% | |
| !! | TAGTTCAATGTGGTTCGGTT+TGG | + | chr5_3:53213375-53213394 | Msa0817760:intron | 40.0% |
| GTCCAGCTTGGAATAACTTT+GGG | - | chr5_3:53213509-53213528 | None:intergenic | 40.0% | |
| TGTCCAGCTTGGAATAACTT+TGG | - | chr5_3:53213510-53213529 | None:intergenic | 40.0% | |
| GTATGTGATCAATGCGTTTG+TGG | + | chr5_3:53213535-53213554 | Msa0817760:CDS | 40.0% | |
| TCAATGCGTTTGTGGTGATA+TGG | + | chr5_3:53213543-53213562 | Msa0817760:CDS | 40.0% | |
| CAATGCGTTTGTGGTGATAT+GGG | + | chr5_3:53213544-53213563 | Msa0817760:CDS | 40.0% | |
| TGGGTTACTATTGTAGGCTT+TGG | + | chr5_3:53213563-53213582 | Msa0817760:CDS | 40.0% | |
| !! | ATTGTAGGCTTTGGATTTGG+AGG | + | chr5_3:53213572-53213591 | Msa0817760:CDS | 40.0% |
| !! | TTGTAGGCTTTGGATTTGGA+GGG | + | chr5_3:53213573-53213592 | Msa0817760:CDS | 40.0% |
| ! | CTTTTCAGTGATGCATTGTG+TGG | - | chr5_3:53213691-53213710 | None:intergenic | 40.0% |
| CAATGCATCACTGAAAAGTG+AGG | + | chr5_3:53213693-53213712 | Msa0817760:exon | 40.0% | |
| AAAGATTGCCTTGCTACACA+AGG | - | chr5_3:53213819-53213838 | None:intergenic | 40.0% | |
| GTTGGCTATAATCGAGTCTA+TGG | - | chr5_3:53213883-53213902 | None:intergenic | 40.0% | |
| GAAAGAGAGGAAGAGAAAGG+AGG | + | chr5_3:53207620-53207639 | Msa0817760:CDS | 45.0% | |
| GGATTCACAGTGAAATCAGC+AGG | + | chr5_3:53207764-53207783 | Msa0817760:intron | 45.0% | |
| CAGTGAAATCAGCAGGATCA+CGG | + | chr5_3:53207771-53207790 | Msa0817760:intron | 45.0% | |
| CCTAGCTGAGAGAATGAGTA+TGG | - | chr5_3:53208041-53208060 | None:intergenic | 45.0% | |
| CCATACTCATTCTCTCAGCT+AGG | + | chr5_3:53208038-53208057 | Msa0817760:CDS | 45.0% | |
| TGTGGCCAAATCGATGTGAT+CGG | + | chr5_3:53208309-53208328 | Msa0817760:intron | 45.0% | |
| ! | TGTGCAGTGGTTTGAAGTGT+TGG | + | chr5_3:53208454-53208473 | Msa0817760:intron | 45.0% |
| !! | CAGTGGTTTGAAGTGTTGGA+AGG | + | chr5_3:53208458-53208477 | Msa0817760:intron | 45.0% |
| ATCACTTGGACAAGAGGACA+TGG | + | chr5_3:53208704-53208723 | Msa0817760:CDS | 45.0% | |
| ! | ATTTGGTCTTTCCTTGGCCT+TGG | + | chr5_3:53208790-53208809 | Msa0817760:CDS | 45.0% |
| ACCATTGCAGCCATTGTTCA+TGG | + | chr5_3:53208841-53208860 | Msa0817760:CDS | 45.0% | |
| ACCATGAACAATGGCTGCAA+TGG | - | chr5_3:53208845-53208864 | None:intergenic | 45.0% | |
| TCATTCGGGCCCAAAGAAAA+TGG | + | chr5_3:53209424-53209443 | Msa0817760:CDS | 45.0% | |
| TCTGTGTGAAATGAGCCAAG+GGG | + | chr5_3:53210273-53210292 | Msa0817760:intron | 45.0% | |
| GGTCAAATAAATTGGGACGG+AGG | + | chr5_3:53210294-53210313 | Msa0817760:intron | 45.0% | |
| !! | GGAGGGAGTACTAGTTATCT+AGG | + | chr5_3:53210312-53210331 | Msa0817760:intron | 45.0% |
| AGGAAATTGGACAGCTCAGA+TGG | + | chr5_3:53210713-53210732 | Msa0817760:intron | 45.0% | |
| AGCTCAGATGGTTCATGCAT+GGG | + | chr5_3:53210725-53210744 | Msa0817760:intron | 45.0% | |
| GAACGTACGAGAACCTCATA+GGG | - | chr5_3:53211037-53211056 | None:intergenic | 45.0% | |
| AGAACGTACGAGAACCTCAT+AGG | - | chr5_3:53211038-53211057 | None:intergenic | 45.0% | |
| GGGAAATCATGCATGCAATG+TGG | + | chr5_3:53211298-53211317 | Msa0817760:intron | 45.0% | |
| GACAGCAATTGCAGATGGTA+GGG | - | chr5_3:53211382-53211401 | None:intergenic | 45.0% | |
| AGACAGCAATTGCAGATGGT+AGG | - | chr5_3:53211383-53211402 | None:intergenic | 45.0% | |
| ATTGCTGTCTATTGGGCCTT+TGG | + | chr5_3:53211393-53211412 | Msa0817760:CDS | 45.0% | |
| GTCCCATTAACTCAGCTGTA+GGG | + | chr5_3:53211936-53211955 | Msa0817760:CDS | 45.0% | |
| TCCCATTAACTCAGCTGTAG+GGG | + | chr5_3:53211937-53211956 | Msa0817760:CDS | 45.0% | |
| TGAGCATATGAGCAGAAGCA+GGG | - | chr5_3:53211994-53212013 | None:intergenic | 45.0% | |
| GAAATGCTTTGATAGGACGG+TGG | + | chr5_3:53212259-53212278 | Msa0817760:intron | 45.0% | |
| TATGGTCCTTCTTGTCCTCA+CGG | + | chr5_3:53212345-53212364 | Msa0817760:intron | 45.0% | |
| TCTTAGCCGTAAAGACGAGA+AGG | + | chr5_3:53212493-53212512 | Msa0817760:intron | 45.0% | |
| !! | ATCGTAGTTGATTTTGGGCG+CGG | - | chr5_3:53213321-53213340 | None:intergenic | 45.0% |
| TGCCCAAAGTTATTCCAAGC+TGG | + | chr5_3:53213504-53213523 | Msa0817760:CDS | 45.0% | |
| !!! | CTGGTAGTTTTGGTGGACAT+TGG | - | chr5_3:53213661-53213680 | None:intergenic | 45.0% |
| !!! | TTGGAAGCTGGTAGTTTTGG+TGG | - | chr5_3:53213668-53213687 | None:intergenic | 45.0% |
| ! | TGGTTGGAAGCTGGTAGTTT+TGG | - | chr5_3:53213671-53213690 | None:intergenic | 45.0% |
| TCAGTGATGCATTGTGTGGT+TGG | - | chr5_3:53213687-53213706 | None:intergenic | 45.0% | |
| !! | TGGGTTTGGTGATTGGCAAT+TGG | + | chr5_3:53213914-53213933 | Msa0817760:three_prime_UTR | 45.0% |
| !!! | TATATTTTTTTCTTATATTT+GGG | - | chr5_3:53208217-53208236 | None:intergenic | 5.0% |
| !!! | ATATATTTTTTTCTTATATT+TGG | - | chr5_3:53208218-53208237 | None:intergenic | 5.0% |
| !!! | AATCTTTTTATTATTTAATT+TGG | + | chr5_3:53213832-53213851 | Msa0817760:three_prime_UTR | 5.0% |
| AAAGGAGGAAGTCCTGCTTC+TGG | + | chr5_3:53207635-53207654 | Msa0817760:CDS | 50.0% | |
| GTTTAGCTGTGCCTCGAATC+AGG | + | chr5_3:53207703-53207722 | Msa0817760:CDS | 50.0% | |
| TTGTGCTATGCAGGTTGCTC+AGG | + | chr5_3:53208001-53208020 | Msa0817760:intron | 50.0% | |
| GTCTGCAACTGCAATAGCGA+CGG | - | chr5_3:53208372-53208391 | None:intergenic | 50.0% | |
| ! | TCCAGCTCATAGCTTGTGCA+AGG | + | chr5_3:53208552-53208571 | Msa0817760:CDS | 50.0% |
| ACCTTGCACAAGCTATGAGC+TGG | - | chr5_3:53208556-53208575 | None:intergenic | 50.0% | |
| CTGTGTATGTGGTCATGCCA+AGG | - | chr5_3:53208810-53208829 | None:intergenic | 50.0% | |
| GCATGACCACATACACAGCT+TGG | + | chr5_3:53208812-53208831 | Msa0817760:CDS | 50.0% | |
| TGCAGCCATTGTTCATGGTC+AGG | + | chr5_3:53208846-53208865 | Msa0817760:CDS | 50.0% | |
| GAATCGACTGTGGTTGAACG+AGG | - | chr5_3:53209211-53209230 | None:intergenic | 50.0% | |
| CGGGCCCAAAGAAAATGGTT+TGG | + | chr5_3:53209429-53209448 | Msa0817760:CDS | 50.0% | |
| TTTGTTTACTCCCTCCGTCC+CGG | + | chr5_3:53210082-53210101 | Msa0817760:intron | 50.0% | |
| ATGGGTCAGTTATTCCGGGA+CGG | - | chr5_3:53210099-53210118 | None:intergenic | 50.0% | |
| CAGCTCAGATGGTTCATGCA+TGG | + | chr5_3:53210724-53210743 | Msa0817760:intron | 50.0% | |
| ATGGTTCATGCATGGGACCA+TGG | + | chr5_3:53210732-53210751 | Msa0817760:intron | 50.0% | |
| AGGACGCGTGAGAAACTCAT+AGG | + | chr5_3:53211149-53211168 | Msa0817760:intron | 50.0% | |
| GGACGCGTGAGAAACTCATA+GGG | + | chr5_3:53211150-53211169 | Msa0817760:intron | 50.0% | |
| CTCTTCTTCCTCGTAATGGC+TGG | + | chr5_3:53211448-53211467 | Msa0817760:CDS | 50.0% | |
| GGTCCCATTAACTCAGCTGT+AGG | + | chr5_3:53211935-53211954 | Msa0817760:CDS | 50.0% | |
| GCCCCTACAGCTGAGTTAAT+GGG | - | chr5_3:53211941-53211960 | None:intergenic | 50.0% | |
| AGCCCCTACAGCTGAGTTAA+TGG | - | chr5_3:53211942-53211961 | None:intergenic | 50.0% | |
| GTGAGCATATGAGCAGAAGC+AGG | - | chr5_3:53211995-53212014 | None:intergenic | 50.0% | |
| TAGGTCTGCTTCAGCAAGAC+AGG | + | chr5_3:53212018-53212037 | Msa0817760:CDS | 50.0% | |
| TCTCAACCGTGAGGACAAGA+AGG | - | chr5_3:53212354-53212373 | None:intergenic | 50.0% | |
| TCTTGTCCTCACGGTTGAGA+CGG | + | chr5_3:53212354-53212373 | Msa0817760:intron | 50.0% | |
| GACGGTGACTTGATCAGTAC+TGG | + | chr5_3:53212372-53212391 | Msa0817760:intron | 50.0% | |
| !! | TAGGCTTTGGATTTGGAGGG+TGG | + | chr5_3:53213576-53213595 | Msa0817760:CDS | 50.0% |
| !! | AGGCTTTGGATTTGGAGGGT+GGG | + | chr5_3:53213577-53213596 | Msa0817760:CDS | 50.0% |
| TGCATTGTGTGGTTGGAAGC+TGG | - | chr5_3:53213680-53213699 | None:intergenic | 50.0% | |
| CTGGTGTTCCTTGTGTAGCA+AGG | + | chr5_3:53213808-53213827 | Msa0817760:three_prime_UTR | 50.0% | |
| ATGTGGTCATGCCAAGGCCA+AGG | - | chr5_3:53208804-53208823 | None:intergenic | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | - | chr5_3:53210095-53210114 | None:intergenic | 55.0% | |
| GGCACTAGCAAGGTTACCTG+TGG | + | chr5_3:53211871-53211890 | Msa0817760:CDS | 55.0% | |
| ! | CTCAGCTGTAGGGGCTCTTT+TGG | + | chr5_3:53211946-53211965 | Msa0817760:CDS | 55.0% |
| AAGTCACCGTCTCAACCGTG+AGG | - | chr5_3:53212363-53212382 | None:intergenic | 55.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | - | chr5_3:53210096-53210115 | None:intergenic | 60.0% | |
| GCATCGCGCCAGCCATTACG+AGG | - | chr5_3:53211459-53211478 | None:intergenic | 65.0% | |
| CGTAATGGCTGGCGCGATGC+TGG | + | chr5_3:53211459-53211478 | Msa0817760:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 53206534 | 53214021 | 53206534 | ID=Msa0817760;Name=Msa0817760 |
| chr5_3 | mRNA | 53206534 | 53214021 | 53206534 | ID=Msa0817760-mRNA-1;Parent=Msa0817760;Name=Msa0817760-mRNA-1;_AED=0.06;_eAED=0.06;_QI=733|1|1|1|0.77|0.7|10|315|479 |
| chr5_3 | exon | 53206534 | 53207011 | 53206534 | ID=Msa0817760-mRNA-1:exon:16034;Parent=Msa0817760-mRNA-1 |
| chr5_3 | exon | 53207112 | 53207345 | 53207112 | ID=Msa0817760-mRNA-1:exon:16035;Parent=Msa0817760-mRNA-1 |
| chr5_3 | exon | 53207530 | 53207724 | 53207530 | ID=Msa0817760-mRNA-1:exon:16036;Parent=Msa0817760-mRNA-1 |
| chr5_3 | exon | 53208014 | 53208199 | 53208014 | ID=Msa0817760-mRNA-1:exon:16037;Parent=Msa0817760-mRNA-1 |
| chr5_3 | exon | 53208461 | 53208573 | 53208461 | ID=Msa0817760-mRNA-1:exon:16038;Parent=Msa0817760-mRNA-1 |
| chr5_3 | exon | 53208684 | 53208867 | 53208684 | ID=Msa0817760-mRNA-1:exon:16039;Parent=Msa0817760-mRNA-1 |
| chr5_3 | exon | 53209410 | 53209507 | 53209410 | ID=Msa0817760-mRNA-1:exon:16040;Parent=Msa0817760-mRNA-1 |
| chr5_3 | exon | 53211299 | 53211506 | 53211299 | ID=Msa0817760-mRNA-1:exon:16041;Parent=Msa0817760-mRNA-1 |
| chr5_3 | exon | 53211782 | 53212039 | 53211782 | ID=Msa0817760-mRNA-1:exon:16042;Parent=Msa0817760-mRNA-1 |
| chr5_3 | exon | 53213488 | 53214021 | 53213488 | ID=Msa0817760-mRNA-1:exon:16043;Parent=Msa0817760-mRNA-1 |
| chr5_3 | five_prime_UTR | 53206534 | 53207011 | 53206534 | ID=Msa0817760-mRNA-1:five_prime_utr;Parent=Msa0817760-mRNA-1 |
| chr5_3 | five_prime_UTR | 53207112 | 53207345 | 53207112 | ID=Msa0817760-mRNA-1:five_prime_utr;Parent=Msa0817760-mRNA-1 |
| chr5_3 | five_prime_UTR | 53207530 | 53207550 | 53207530 | ID=Msa0817760-mRNA-1:five_prime_utr;Parent=Msa0817760-mRNA-1 |
| chr5_3 | CDS | 53207551 | 53207724 | 53207551 | ID=Msa0817760-mRNA-1:cds;Parent=Msa0817760-mRNA-1 |
| chr5_3 | CDS | 53208014 | 53208199 | 53208014 | ID=Msa0817760-mRNA-1:cds;Parent=Msa0817760-mRNA-1 |
| chr5_3 | CDS | 53208461 | 53208573 | 53208461 | ID=Msa0817760-mRNA-1:cds;Parent=Msa0817760-mRNA-1 |
| chr5_3 | CDS | 53208684 | 53208867 | 53208684 | ID=Msa0817760-mRNA-1:cds;Parent=Msa0817760-mRNA-1 |
| chr5_3 | CDS | 53209410 | 53209507 | 53209410 | ID=Msa0817760-mRNA-1:cds;Parent=Msa0817760-mRNA-1 |
| chr5_3 | CDS | 53211299 | 53211506 | 53211299 | ID=Msa0817760-mRNA-1:cds;Parent=Msa0817760-mRNA-1 |
| chr5_3 | CDS | 53211782 | 53212039 | 53211782 | ID=Msa0817760-mRNA-1:cds;Parent=Msa0817760-mRNA-1 |
| chr5_3 | CDS | 53213488 | 53213706 | 53213488 | ID=Msa0817760-mRNA-1:cds;Parent=Msa0817760-mRNA-1 |
| chr5_3 | three_prime_UTR | 53213707 | 53214021 | 53213707 | ID=Msa0817760-mRNA-1:three_prime_utr;Parent=Msa0817760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
