Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0081020 | RHN80910.1 | 70.250 | 400 | 81 | 5 | 26 | 405 | 27 | 408 | 5.09e-100 | 313 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0081020 | A0A396JRJ4 | 70.250 | 400 | 81 | 5 | 26 | 405 | 27 | 408 | 2.43e-100 | 313 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa0081020 | 0.852106 | 5.737902e-61 | -8.615850e-47 |
| Msa0002580 | Msa0081020 | 0.812272 | 4.607832e-51 | -8.615850e-47 |
| Msa0005380 | Msa0081020 | 0.822354 | 2.477049e-53 | -8.615850e-47 |
| Msa0012200 | Msa0081020 | 0.804207 | 2.412862e-49 | -8.615850e-47 |
| Msa0017930 | Msa0081020 | 0.821457 | 3.996753e-53 | -8.615850e-47 |
| Msa0028620 | Msa0081020 | 0.802749 | 4.840085e-49 | -8.615850e-47 |
| Msa0030700 | Msa0081020 | 0.816472 | 5.434099e-52 | -8.615850e-47 |
| Msa0036790 | Msa0081020 | 0.830656 | 2.597349e-55 | -8.615850e-47 |
| Msa0038290 | Msa0081020 | -0.801249 | 9.843711e-49 | -8.615850e-47 |
| Msa0053860 | Msa0081020 | 0.806765 | 7.016690e-50 | -8.615850e-47 |
| Msa0074600 | Msa0081020 | 0.857248 | 1.857744e-62 | -8.615850e-47 |
| Msa0078120 | Msa0081020 | 0.801905 | 7.221324e-49 | -8.615850e-47 |
| Msa0081020 | Msa0098040 | 0.801603 | 8.330926e-49 | -8.615850e-47 |
| Msa0081020 | Msa0099700 | 0.801543 | 8.567545e-49 | -8.615850e-47 |
| Msa0081020 | Msa0101500 | -0.805565 | 1.255448e-49 | -8.615850e-47 |
| Msa0081020 | Msa0101860 | 0.805345 | 1.395953e-49 | -8.615850e-47 |
| Msa0081020 | Msa0103770 | 0.839914 | 1.191785e-57 | -8.615850e-47 |
| Msa0081020 | Msa0124320 | 0.821036 | 4.997594e-53 | -8.615850e-47 |
| Msa0081020 | Msa0126040 | 0.852561 | 4.257309e-61 | -8.615850e-47 |
| Msa0081020 | Msa0132000 | 0.905876 | 2.700178e-80 | -8.615850e-47 |
| Msa0081020 | Msa0132630 | -0.823179 | 1.592531e-53 | -8.615850e-47 |
| Msa0081020 | Msa0143820 | 0.824983 | 6.003883e-54 | -8.615850e-47 |
| Msa0081020 | Msa0173690 | 0.803131 | 4.034938e-49 | -8.615850e-47 |
| Msa0081020 | Msa0206450 | 0.804607 | 1.992180e-49 | -8.615850e-47 |
| Msa0081020 | Msa0213410 | 0.814307 | 1.647130e-51 | -8.615850e-47 |
| Msa0081020 | Msa0219590 | 0.809199 | 2.129660e-50 | -8.615850e-47 |
| Msa0081020 | Msa0225100 | 0.814249 | 1.695732e-51 | -8.615850e-47 |
| Msa0081020 | Msa0225110 | 0.801270 | 9.744886e-49 | -8.615850e-47 |
| Msa0081020 | Msa0231200 | 0.805296 | 1.429889e-49 | -8.615850e-47 |
| Msa0081020 | Msa0232020 | 0.800084 | 1.701344e-48 | -8.615850e-47 |
| Msa0081020 | Msa0232090 | 0.800026 | 1.748109e-48 | -8.615850e-47 |
| Msa0081020 | Msa0233320 | 0.800307 | 1.532601e-48 | -8.615850e-47 |
| Msa0081020 | Msa0237420 | 0.808293 | 3.325608e-50 | -8.615850e-47 |
| Msa0081020 | Msa0240900 | 0.801178 | 1.017631e-48 | -8.615850e-47 |
| Msa0081020 | Msa0244640 | 0.852963 | 3.270002e-61 | -8.615850e-47 |
| Msa0081020 | Msa0251710 | 0.813092 | 3.049581e-51 | -8.615850e-47 |
| Msa0081020 | Msa0263920 | 0.816119 | 6.516233e-52 | -8.615850e-47 |
| Msa0081020 | Msa0266180 | 0.816128 | 6.487519e-52 | -8.615850e-47 |
| Msa0081020 | Msa0266200 | 0.806711 | 7.203355e-50 | -8.615850e-47 |
| Msa0081020 | Msa0269970 | 0.940872 | 1.107314e-100 | -8.615850e-47 |
| Msa0081020 | Msa0269980 | 0.860656 | 1.773847e-63 | -8.615850e-47 |
| Msa0081020 | Msa0270340 | 0.806520 | 7.905805e-50 | -8.615850e-47 |
| Msa0081020 | Msa0271540 | 0.817610 | 3.015653e-52 | -8.615850e-47 |
| Msa0081020 | Msa0283330 | 0.827968 | 1.166795e-54 | -8.615850e-47 |
| Msa0081020 | Msa0287740 | 0.816083 | 6.640297e-52 | -8.615850e-47 |
| Msa0081020 | Msa0287780 | 0.836145 | 1.111076e-56 | -8.615850e-47 |
| Msa0081020 | Msa0287870 | 0.862117 | 6.358385e-64 | -8.615850e-47 |
| Msa0081020 | Msa0290720 | 0.825584 | 4.328431e-54 | -8.615850e-47 |
| Msa0081020 | Msa0307670 | 0.806976 | 6.332064e-50 | -8.615850e-47 |
| Msa0081020 | Msa0321620 | 0.837500 | 5.010795e-57 | -8.615850e-47 |
| Msa0081020 | Msa0323270 | 0.810156 | 1.326122e-50 | -8.615850e-47 |
| Msa0081020 | Msa0330860 | 0.850207 | 1.971370e-60 | -8.615850e-47 |
| Msa0081020 | Msa0337580 | 0.805475 | 1.311329e-49 | -8.615850e-47 |
| Msa0081020 | Msa0349210 | 0.834291 | 3.263787e-56 | -8.615850e-47 |
| Msa0081020 | Msa0364190 | 0.800344 | 1.506507e-48 | -8.615850e-47 |
| Msa0081020 | Msa0379790 | -0.828791 | 7.388162e-55 | -8.615850e-47 |
| Msa0081020 | Msa0380930 | 0.804617 | 1.982559e-49 | -8.615850e-47 |
| Msa0081020 | Msa0418930 | 0.821583 | 3.738851e-53 | -8.615850e-47 |
| Msa0081020 | Msa0425170 | 0.812383 | 4.357423e-51 | -8.615850e-47 |
| Msa0081020 | Msa0434540 | 0.820466 | 6.759482e-53 | -8.615850e-47 |
| Msa0081020 | Msa0436910 | 0.816020 | 6.855826e-52 | -8.615850e-47 |
| Msa0081020 | Msa0457560 | 0.811646 | 6.307730e-51 | -8.615850e-47 |
| Msa0081020 | Msa0471670 | 0.805501 | 1.294705e-49 | -8.615850e-47 |
| Msa0081020 | Msa0513970 | 0.814075 | 1.852700e-51 | -8.615850e-47 |
| Msa0081020 | Msa0519750 | 0.836843 | 7.376996e-57 | -8.615850e-47 |
| Msa0081020 | Msa0519820 | 0.828478 | 8.790013e-55 | -8.615850e-47 |
| Msa0081020 | Msa0519830 | 0.831981 | 1.226496e-55 | -8.615850e-47 |
| Msa0081020 | Msa0528570 | 0.812749 | 3.624985e-51 | -8.615850e-47 |
| Msa0081020 | Msa0530050 | 0.809477 | 1.856048e-50 | -8.615850e-47 |
| Msa0081020 | Msa0534150 | 0.808093 | 3.668016e-50 | -8.615850e-47 |
| Msa0081020 | Msa0544490 | 0.808452 | 3.075672e-50 | -8.615850e-47 |
| Msa0081020 | Msa0545050 | 0.812270 | 4.614268e-51 | -8.615850e-47 |
| Msa0081020 | Msa0556230 | -0.801298 | 9.618448e-49 | -8.615850e-47 |
| Msa0081020 | Msa0562660 | 0.809324 | 2.001791e-50 | -8.615850e-47 |
| Msa0081020 | Msa0567120 | 0.851150 | 1.070080e-60 | -8.615850e-47 |
| Msa0081020 | Msa0570120 | 0.820162 | 7.934108e-53 | -8.615850e-47 |
| Msa0081020 | Msa0575320 | 0.832763 | 7.851196e-56 | -8.615850e-47 |
| Msa0081020 | Msa0576790 | 0.800328 | 1.517343e-48 | -8.615850e-47 |
| Msa0081020 | Msa0583360 | -0.807754 | 4.331150e-50 | -8.615850e-47 |
| Msa0081020 | Msa0586750 | 0.812732 | 3.655451e-51 | -8.615850e-47 |
| Msa0081020 | Msa0590150 | 0.801986 | 6.948526e-49 | -8.615850e-47 |
| Msa0081020 | Msa0594050 | 0.801055 | 1.078527e-48 | -8.615850e-47 |
| Msa0081020 | Msa0611210 | 0.827546 | 1.473494e-54 | -8.615850e-47 |
| Msa0081020 | Msa0611540 | -0.829527 | 4.896223e-55 | -8.615850e-47 |
| Msa0081020 | Msa0641130 | 0.815814 | 7.621975e-52 | -8.615850e-47 |
| Msa0081020 | Msa0647030 | 0.806473 | 8.085353e-50 | -8.615850e-47 |
| Msa0081020 | Msa0658580 | 0.869297 | 3.440641e-66 | -8.615850e-47 |
| Msa0081020 | Msa0664660 | 0.815291 | 9.965359e-52 | -8.615850e-47 |
| Msa0081020 | Msa0664710 | 0.826069 | 3.321188e-54 | -8.615850e-47 |
| Msa0081020 | Msa0673120 | 0.812871 | 3.408427e-51 | -8.615850e-47 |
| Msa0081020 | Msa0674480 | 0.806508 | 7.949457e-50 | -8.615850e-47 |
| Msa0081020 | Msa0674560 | 0.807949 | 3.936361e-50 | -8.615850e-47 |
| Msa0081020 | Msa0703540 | 0.873463 | 1.442587e-67 | -8.615850e-47 |
| Msa0081020 | Msa0706230 | 0.813374 | 2.644264e-51 | -8.615850e-47 |
| Msa0081020 | Msa0709270 | 0.840606 | 7.857998e-58 | -8.615850e-47 |
| Msa0081020 | Msa0729150 | 0.828406 | 9.149763e-55 | -8.615850e-47 |
| Msa0081020 | Msa0729270 | 0.821077 | 4.891913e-53 | -8.615850e-47 |
| Msa0081020 | Msa0733010 | 0.833769 | 4.408012e-56 | -8.615850e-47 |
| Msa0081020 | Msa0738340 | 0.832958 | 7.021750e-56 | -8.615850e-47 |
| Msa0081020 | Msa0741220 | 0.813006 | 3.185006e-51 | -8.615850e-47 |
| Msa0081020 | Msa0741650 | 0.827329 | 1.661836e-54 | -8.615850e-47 |
| Msa0081020 | Msa0769690 | 0.823501 | 1.338930e-53 | -8.615850e-47 |
| Msa0081020 | Msa0773990 | 0.803026 | 4.242409e-49 | -8.615850e-47 |
| Msa0081020 | Msa0780570 | 0.805216 | 1.485563e-49 | -8.615850e-47 |
| Msa0081020 | Msa0799970 | 0.820704 | 5.960063e-53 | -8.615850e-47 |
| Msa0081020 | Msa0817760 | 0.839580 | 1.455077e-57 | -8.615850e-47 |
| Msa0081020 | Msa0826950 | 0.802712 | 4.926326e-49 | -8.615850e-47 |
| Msa0081020 | Msa0829300 | 0.840631 | 7.741325e-58 | -8.615850e-47 |
| Msa0081020 | Msa0829330 | 0.834968 | 2.204586e-56 | -8.615850e-47 |
| Msa0081020 | Msa0833530 | 0.804491 | 2.106182e-49 | -8.615850e-47 |
| Msa0081020 | Msa0855870 | 0.845941 | 2.966580e-59 | -8.615850e-47 |
| Msa0081020 | Msa0878220 | 0.814891 | 1.223042e-51 | -8.615850e-47 |
| Msa0081020 | Msa0881010 | 0.816480 | 5.410496e-52 | -8.615850e-47 |
| Msa0081020 | Msa0881040 | 0.840571 | 8.024995e-58 | -8.615850e-47 |
| Msa0081020 | Msa0881720 | 0.801349 | 9.389893e-49 | -8.615850e-47 |
| Msa0081020 | Msa0899970 | 0.820006 | 8.613721e-53 | -8.615850e-47 |
| Msa0081020 | Msa0903310 | 0.803649 | 3.151282e-49 | -8.615850e-47 |
| Msa0081020 | Msa0905240 | 0.814373 | 1.592171e-51 | -8.615850e-47 |
| Msa0081020 | Msa0930270 | 0.822465 | 2.335220e-53 | -8.615850e-47 |
| Msa0081020 | Msa0935820 | 0.844462 | 7.449652e-59 | -8.615850e-47 |
| Msa0081020 | Msa0937230 | 0.811305 | 7.481364e-51 | -8.615850e-47 |
| Msa0081020 | Msa0943970 | 0.825691 | 4.082375e-54 | -8.615850e-47 |
| Msa0081020 | Msa0944020 | 0.811736 | 6.029667e-51 | -8.615850e-47 |
| Msa0081020 | Msa0960880 | -0.844758 | 6.199380e-59 | -8.615850e-47 |
| Msa0081020 | Msa0965080 | 0.817362 | 3.429456e-52 | -8.615850e-47 |
| Msa0081020 | Msa0965290 | 0.832035 | 1.189253e-55 | -8.615850e-47 |
| Msa0081020 | Msa0972680 | 0.803321 | 3.686627e-49 | -8.615850e-47 |
| Msa0081020 | Msa0972840 | 0.827910 | 1.204798e-54 | -8.615850e-47 |
| Msa0081020 | Msa0974520 | 0.812678 | 3.757896e-51 | -8.615850e-47 |
| Msa0081020 | Msa0992510 | 0.818867 | 1.566205e-52 | -8.615850e-47 |
| Msa0081020 | Msa0999680 | 0.829225 | 5.797009e-55 | -8.615850e-47 |
| Msa0081020 | Msa1021590 | 0.806022 | 1.006370e-49 | -8.615850e-47 |
| Msa0081020 | Msa1030810 | 0.804579 | 2.018641e-49 | -8.615850e-47 |
| Msa0081020 | Msa1044680 | 0.833101 | 6.472202e-56 | -8.615850e-47 |
| Msa0081020 | Msa1065460 | 0.810556 | 1.086816e-50 | -8.615850e-47 |
| Msa0081020 | Msa1101090 | 0.813665 | 2.282043e-51 | -8.615850e-47 |
| Msa0081020 | Msa1105640 | 0.821277 | 4.398089e-53 | -8.615850e-47 |
| Msa0081020 | Msa1114780 | 0.808964 | 2.390464e-50 | -8.615850e-47 |
| Msa0081020 | Msa1122150 | 0.847890 | 8.682376e-60 | -8.615850e-47 |
| Msa0081020 | Msa1132470 | 0.876283 | 1.579734e-68 | -8.615850e-47 |
| Msa0081020 | Msa1140630 | 0.822778 | 1.974462e-53 | -8.615850e-47 |
| Msa0081020 | Msa1141910 | 0.819976 | 8.752942e-53 | -8.615850e-47 |
| Msa0081020 | Msa1147740 | 0.809566 | 1.775848e-50 | -8.615850e-47 |
| Msa0081020 | Msa1148960 | 0.804996 | 1.652186e-49 | -8.615850e-47 |
| Msa0081020 | Msa1150280 | 0.816624 | 5.023337e-52 | -8.615850e-47 |
| Msa0081020 | Msa1155170 | -0.815787 | 7.730430e-52 | -8.615850e-47 |
| Msa0081020 | Msa1160560 | 0.841927 | 3.531109e-58 | -8.615850e-47 |
| Msa0081020 | Msa1161810 | 0.822888 | 1.861787e-53 | -8.615850e-47 |
| Msa0081020 | Msa1175100 | 0.807635 | 4.591685e-50 | -8.615850e-47 |
| Msa0081020 | Msa1188180 | 0.808680 | 2.750113e-50 | -8.615850e-47 |
| Msa0081020 | Msa1213890 | 0.831754 | 1.394921e-55 | -8.615850e-47 |
| Msa0081020 | Msa1214860 | 0.801472 | 8.858849e-49 | -8.615850e-47 |
| Msa0081020 | Msa1225860 | -0.812775 | 3.576977e-51 | -8.615850e-47 |
| Msa0081020 | Msa1226460 | 0.841466 | 4.671195e-58 | -8.615850e-47 |
| Msa0081020 | Msa1234470 | 0.806875 | 6.650093e-50 | -8.615850e-47 |
| Msa0081020 | Msa1236440 | 0.819490 | 1.130356e-52 | -8.615850e-47 |
| Msa0081020 | Msa1238600 | 0.805273 | 1.445609e-49 | -8.615850e-47 |
| Msa0081020 | Msa1238660 | 0.816167 | 6.358192e-52 | -8.615850e-47 |
| Msa0081020 | Msa1244500 | 0.800192 | 1.617681e-48 | -8.615850e-47 |
| Msa0081020 | Msa1265650 | 0.812136 | 4.934481e-51 | -8.615850e-47 |
| Msa0081020 | Msa1277670 | 0.816517 | 5.308538e-52 | -8.615850e-47 |
| Msa0081020 | Msa1283740 | 0.807491 | 4.926031e-50 | -8.615850e-47 |
| Msa0081020 | Msa1297230 | 0.801071 | 1.070384e-48 | -8.615850e-47 |
| Msa0081020 | Msa1300830 | 0.813690 | 2.252325e-51 | -8.615850e-47 |
| Msa0081020 | Msa1303560 | 0.807255 | 5.527750e-50 | -8.615850e-47 |
| Msa0081020 | Msa1303650 | 0.808292 | 3.326786e-50 | -8.615850e-47 |
| Msa0081020 | Msa1319560 | 0.824105 | 9.666052e-54 | -8.615850e-47 |
| Msa0081020 | Msa1325410 | -0.838268 | 3.180869e-57 | -8.615850e-47 |
| Msa0081020 | Msa1340200 | 0.804705 | 1.900086e-49 | -8.615850e-47 |
| Msa0081020 | Msa1341840 | 0.812369 | 4.390066e-51 | -8.615850e-47 |
| Msa0081020 | Msa1342380 | 0.843518 | 1.333801e-58 | -8.615850e-47 |
| Msa0081020 | Msa1345610 | -0.833045 | 6.680867e-56 | -8.615850e-47 |
| Msa0081020 | Msa1345810 | 0.802743 | 4.853950e-49 | -8.615850e-47 |
| Msa0081020 | Msa1355450 | 0.837794 | 4.211537e-57 | -8.615850e-47 |
| Msa0081020 | Msa1362290 | 0.807512 | 4.875480e-50 | -8.615850e-47 |
| Msa0081020 | Msa1363820 | -0.819088 | 1.395523e-52 | -8.615850e-47 |
| Msa0081020 | Msa1369920 | -0.806641 | 7.454670e-50 | -8.615850e-47 |
| Msa0081020 | Msa1382300 | 0.811871 | 5.635654e-51 | -8.615850e-47 |
| Msa0081020 | Msa1397740 | 0.811012 | 8.660029e-51 | -8.615850e-47 |
| Msa0081020 | Msa1414640 | 0.827669 | 1.377184e-54 | -8.615850e-47 |
| Msa0081020 | Msa1415540 | 0.800617 | 1.325314e-48 | -8.615850e-47 |
| Msa0081020 | Msa1417380 | 0.808919 | 2.444353e-50 | -8.615850e-47 |
| Msa0081020 | Msa1417440 | -0.836732 | 7.877482e-57 | -8.615850e-47 |
| Msa0081020 | Msa1419840 | 0.831541 | 1.574266e-55 | -8.615850e-47 |
| Msa0081020 | Msa1427100 | 0.827154 | 1.830107e-54 | -8.615850e-47 |
| Msa0081020 | Msa1434220 | 0.800012 | 1.759479e-48 | -8.615850e-47 |
| Msa0081020 | Msa1442920 | 0.862272 | 5.699034e-64 | -8.615850e-47 |
| Msa0081020 | Msa1452710 | 0.841489 | 4.608348e-58 | -8.615850e-47 |
| Msa0081020 | Msa1458680 | 0.864543 | 1.127529e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0081020 | MtrunA17_Chr1g0193341 | 70.250 | 400 | 81 | 5 | 26 | 405 | 27 | 408 | 4.68e-104 | 313 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 171 sgRNAs with CRISPR-Local
Find 215 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTGCACAAGTTTCACTAAA+TGG | 0.207773 | 1_2:-59479251 | None:intergenic |
| TCAAAATGGAGCGGATAATT+TGG | 0.213840 | 1_2:-59478865 | None:intergenic |
| AATGTTGTTCTGGTTCTTTC+CGG | 0.224028 | 1_2:+59479831 | Msa0081020:CDS |
| TGGCCCTGCTTCGTCGTTCT+TGG | 0.231759 | 1_2:+59479676 | Msa0081020:five_prime_UTR |
| GGCTTGGCTGGAGTTTCTTT+TGG | 0.240569 | 1_2:+59478759 | Msa0081020:five_prime_UTR |
| TTGGTTTCTGTAGACTGTTC+TGG | 0.263852 | 1_2:+59479764 | Msa0081020:CDS |
| GATGCCAGTGTTTCTCTAAC+AGG | 0.266826 | 1_2:+59478918 | Msa0081020:five_prime_UTR |
| TGCTTCTGAGCTGGCTTGGC+TGG | 0.271822 | 1_2:+59478747 | Msa0081020:five_prime_UTR |
| TGTTTGAATGATTGAATTCC+TGG | 0.275194 | 1_2:+59479596 | Msa0081020:five_prime_UTR |
| TTTGGAAGGTTCTTGGATAT+TGG | 0.282294 | 1_2:+59478777 | Msa0081020:five_prime_UTR |
| CTCGCTTTCCTCCTCTTTGA+TGG | 0.284125 | 1_2:+59479292 | Msa0081020:five_prime_UTR |
| TGCTTCTGACTCAGAGTTGT+TGG | 0.310843 | 1_2:+59479466 | Msa0081020:five_prime_UTR |
| GTCTCAATATCCAAGTCTTT+TGG | 0.311504 | 1_2:+59479500 | Msa0081020:five_prime_UTR |
| TACAAGTAGGTGAGGAAGTT+GGG | 0.326946 | 1_2:-59479376 | None:intergenic |
| TCAACAATTGCAATTGCATT+TGG | 0.345919 | 1_2:+59480832 | Msa0081020:CDS |
| GAAGGTTCCACCGGATTTGC+AGG | 0.347717 | 1_2:+59479212 | Msa0081020:five_prime_UTR |
| CTGCACAAGTTTCACTAAAT+GGG | 0.354600 | 1_2:-59479250 | None:intergenic |
| GGAAGTTGGGGAAACTATTA+AGG | 0.356667 | 1_2:-59479363 | None:intergenic |
| AACATTGATCCTCTGTCTAA+TGG | 0.363760 | 1_2:-59479425 | None:intergenic |
| GGGTTCTTCTTTCACTGTTT+CGG | 0.368570 | 1_2:+59480732 | Msa0081020:CDS |
| GAATTTGTTTGAATGCAAAA+AGG | 0.370105 | 1_2:-59478485 | None:intergenic |
| TGGACAGCATCAGATGCTTC+TGG | 0.372645 | 1_2:+59479068 | Msa0081020:five_prime_UTR |
| TGTTCCGTTGAATGTTGTTC+TGG | 0.373987 | 1_2:+59479821 | Msa0081020:CDS |
| GAGGAGGAAACTATTCAAAA+TGG | 0.376197 | 1_2:-59478879 | None:intergenic |
| CCGCCTCTCTCGAGGATACT+TGG | 0.389175 | 1_2:+59479048 | Msa0081020:five_prime_UTR |
| ATCAAGAGAATTAGAATTTG+AGG | 0.394623 | 1_2:-59479717 | None:intergenic |
| CAGAATTAAAATTGCTTCCA+TGG | 0.396823 | 1_2:+59478334 | Msa0081020:five_prime_UTR |
| TCTGGAATTGAATATGTGTT+TGG | 0.397070 | 1_2:+59479782 | Msa0081020:CDS |
| GGGACATTAAGGTTAAATAA+TGG | 0.398644 | 1_2:-59478620 | None:intergenic |
| GAGCCTACAGAAACAGTAAA+AGG | 0.403452 | 1_2:-59479884 | None:intergenic |
| TTTACTTTCTCTGTTTCAGC+TGG | 0.408285 | 1_2:+59479656 | Msa0081020:five_prime_UTR |
| GTAGCCGCATGTTCTTCTCT+TGG | 0.410790 | 1_2:+59480589 | Msa0081020:CDS |
| TTCTACAGCAATGACATCAT+TGG | 0.413723 | 1_2:+59479745 | Msa0081020:exon |
| GCAGCATTAACCGTTGTGTT+AGG | 0.414445 | 1_2:+59479269 | Msa0081020:five_prime_UTR |
| TCAGACAACCCCTGCAAATC+CGG | 0.423774 | 1_2:-59479222 | None:intergenic |
| AAAGACAACAGCAGCGATAT+CGG | 0.428235 | 1_2:-59480785 | None:intergenic |
| GAGGCCAGAGGCTCAAGCTC+GGG | 0.428516 | 1_2:+59480922 | Msa0081020:CDS |
| TGAATGCTTCTGAGCTGGCT+TGG | 0.431567 | 1_2:+59478743 | Msa0081020:five_prime_UTR |
| AAAGCCCGAGCTTGAGCCTC+TGG | 0.433641 | 1_2:-59480926 | None:intergenic |
| GATGGTCTAGGCCATGCTTT+AGG | 0.437618 | 1_2:-59478437 | None:intergenic |
| GAAAAGATTGTTGTAAAAGA+TGG | 0.441459 | 1_2:-59479176 | None:intergenic |
| GCCGAAAATAACCAAAGAAC+CGG | 0.441950 | 1_2:-59480893 | None:intergenic |
| AATTATTATAGTATATAAGT+TGG | 0.452810 | 1_2:-59478533 | None:intergenic |
| GAGACCAAGAACGACGAAGC+AGG | 0.454435 | 1_2:-59479680 | None:intergenic |
| TTGTTTGAATGCTTCTGAGC+TGG | 0.455331 | 1_2:+59478738 | Msa0081020:five_prime_UTR |
| TTCAGAAACAAGTGCCGAAA+AGG | 0.455978 | 1_2:-59480953 | None:intergenic |
| GGACATTAAGGTTAAATAAT+GGG | 0.456526 | 1_2:-59478619 | None:intergenic |
| TGAGGCCAGAGGCTCAAGCT+CGG | 0.460438 | 1_2:+59480921 | Msa0081020:CDS |
| GTGTATATAGCAGATGGTCT+AGG | 0.462891 | 1_2:-59478449 | None:intergenic |
| AACGGTAAAAGAAGAACCTT+TGG | 0.465415 | 1_2:-59480323 | None:intergenic |
| GGCTCAACTTCAGTTGCCAC+TGG | 0.485901 | 1_2:+59480442 | Msa0081020:CDS |
| TTACTGAAGTTGAGGAAAAC+CGG | 0.486636 | 1_2:-59479850 | None:intergenic |
| ACTGAAAATCAAGAACAAAC+AGG | 0.490972 | 1_2:-59479545 | None:intergenic |
| TCTTCTTTCACTGTTTCGGT+AGG | 0.496000 | 1_2:+59480736 | Msa0081020:CDS |
| GAAAGAAGTTGTTGGTGATA+CGG | 0.501939 | 1_2:-59479150 | None:intergenic |
| TTTGGAGAAAGAACGAATTG+AGG | 0.504817 | 1_2:-59478847 | None:intergenic |
| ATTGAATTCCTGGTTCACTT+TGG | 0.505726 | 1_2:+59479606 | Msa0081020:five_prime_UTR |
| GATTTCTTCCACCTTTGTCT+CGG | 0.511527 | 1_2:+59478959 | Msa0081020:five_prime_UTR |
| AAGACAGCTACAATTGAAGC+AGG | 0.514361 | 1_2:-59478987 | None:intergenic |
| ACAACATTCAACGGAACAAA+GGG | 0.517659 | 1_2:-59479816 | None:intergenic |
| GTCACTAGTGAAAGCAAAGA+AGG | 0.517866 | 1_2:-59478694 | None:intergenic |
| TGAAGTTGAGCCTACAGAAA+AGG | 0.518385 | 1_2:-59480431 | None:intergenic |
| ACCTCAACTTCAGTAGCTGC+AGG | 0.519771 | 1_2:+59480532 | Msa0081020:CDS |
| GATGGCAAGAAAGAAGTTGT+TGG | 0.519983 | 1_2:-59479158 | None:intergenic |
| TTACAAGTAGGTGAGGAAGT+TGG | 0.520315 | 1_2:-59479377 | None:intergenic |
| TCCTCAACTTCAGTAACCAC+AGG | 0.530922 | 1_2:+59479857 | Msa0081020:CDS |
| TGGGGAAACTATTAAGGAAG+TGG | 0.534716 | 1_2:-59479357 | None:intergenic |
| AAACCTGTCCTCAGAGCCAA+AGG | 0.538748 | 1_2:-59478643 | None:intergenic |
| GCTTCAACTTCAGCAGCCAC+AGG | 0.539201 | 1_2:+59480352 | Msa0081020:CDS |
| TGCTGCAGAGGATGAAAAGA+AGG | 0.539585 | 1_2:-59479093 | None:intergenic |
| AGACCAAGAACGACGAAGCA+GGG | 0.541479 | 1_2:-59479679 | None:intergenic |
| GACTAATCAATTTGAAGAGG+AGG | 0.541779 | 1_2:-59480992 | None:intergenic |
| GGCTACTGAAGTTGAGGCTA+CGG | 0.547997 | 1_2:-59480572 | None:intergenic |
| TTTATCTGCAGTCTCAACTT+CGG | 0.551981 | 1_2:+59480702 | Msa0081020:CDS |
| AAAGCAAAGAAGGCTATCAC+TGG | 0.552054 | 1_2:-59478684 | None:intergenic |
| GCCTCAATTTCAGTAACCAC+GGG | 0.552823 | 1_2:+59480622 | Msa0081020:CDS |
| ATCACAAGAAATTTCACAAG+AGG | 0.555487 | 1_2:-59480863 | None:intergenic |
| AGTATCCTCGAGAGAGGCGG+AGG | 0.558029 | 1_2:-59479045 | None:intergenic |
| ACCCGTGGTTACTGAAATTG+AGG | 0.559345 | 1_2:-59480623 | None:intergenic |
| TTCGGCTCTGCTGAGGCCAG+AGG | 0.560764 | 1_2:+59480910 | Msa0081020:CDS |
| TGAAGTTGATCCTACAGAAA+CGG | 0.561046 | 1_2:-59479981 | None:intergenic |
| TGAAGTTGATCCTACAGAAA+CGG | 0.561046 | 1_2:-59480116 | None:intergenic |
| TGAAGTTGATCCTACAGAAA+CGG | 0.561046 | 1_2:-59480206 | None:intergenic |
| AACAACATTCAACGGAACAA+AGG | 0.561333 | 1_2:-59479817 | None:intergenic |
| TGTAGTTGAGCCTACAGAAA+CGG | 0.561347 | 1_2:-59480161 | None:intergenic |
| ACCTGCAGCTACTGAAGTTG+AGG | 0.561697 | 1_2:-59480533 | None:intergenic |
| GGTTCACCCTCCAAAAGACT+TGG | 0.562523 | 1_2:-59479510 | None:intergenic |
| GATGAAAACCAAAGTGAACC+AGG | 0.563084 | 1_2:-59479614 | None:intergenic |
| ACTTCAGGAGAAGGTTCCAC+CGG | 0.563751 | 1_2:+59479203 | Msa0081020:five_prime_UTR |
| TTCAAACAACATTATAGCAA+AGG | 0.565058 | 1_2:-59478724 | None:intergenic |
| AGCTTCAACTTCAGTAGCCA+CGG | 0.565228 | 1_2:+59480081 | Msa0081020:CDS |
| ACAAGTAGGTGAGGAAGTTG+GGG | 0.565814 | 1_2:-59479375 | None:intergenic |
| GAAGACTGAGGAACAGAATG+AGG | 0.566055 | 1_2:-59479012 | None:intergenic |
| TCATCCACTTCAGTAACCAC+AGG | 0.568495 | 1_2:+59479632 | Msa0081020:five_prime_UTR |
| GGATCAACTTCAGTAACTAC+AGG | 0.568753 | 1_2:+59480127 | Msa0081020:CDS |
| AACCTGTCCTCAGAGCCAAA+GGG | 0.568915 | 1_2:-59478642 | None:intergenic |
| GGCTCAACTTCAGTAGCCAC+AGG | 0.569717 | 1_2:+59479902 | Msa0081020:CDS |
| AAGGTTCCACCGGATTTGCA+GGG | 0.573924 | 1_2:+59479213 | Msa0081020:five_prime_UTR |
| AGCTTGAACTTCAGTAGCCA+CGG | 0.577924 | 1_2:+59479946 | Msa0081020:intron |
| AAAAGTTGTTGTTGCTGCAG+AGG | 0.578943 | 1_2:-59479105 | None:intergenic |
| GTCTCAACTTCGGTAACCAC+GGG | 0.579703 | 1_2:+59480667 | Msa0081020:CDS |
| GTCTCAACTTCGGTAACCAC+GGG | 0.579703 | 1_2:+59480712 | Msa0081020:CDS |
| AGAGGAAGAAGTGAAACCAA+AGG | 0.579767 | 1_2:-59479573 | None:intergenic |
| TGAGGAGCCAGTGAAAATTG+AGG | 0.580572 | 1_2:-59478829 | None:intergenic |
| GTCAACCTCCGCCTCTCTCG+AGG | 0.588240 | 1_2:+59479040 | Msa0081020:five_prime_UTR |
| GGCTCAACTACAGTTGCCAC+AGG | 0.591973 | 1_2:+59480172 | Msa0081020:CDS |
| TTCAACGGAACAAAGGGAAG+AGG | 0.592510 | 1_2:-59479810 | None:intergenic |
| TGAAGTTGAAGCTACAGAAA+CGG | 0.594350 | 1_2:-59480296 | None:intergenic |
| TGAAGTTGAAGCTACAGAAA+CGG | 0.594350 | 1_2:-59480341 | None:intergenic |
| AAAGCCTGTGGTTACTGAAG+TGG | 0.595466 | 1_2:-59479636 | None:intergenic |
| AATTCAATCATTCAAACAAG+AGG | 0.595584 | 1_2:-59479591 | None:intergenic |
| TCCTCTGTCTAATGGAGTGG+AGG | 0.595670 | 1_2:-59479417 | None:intergenic |
| TGAACCTGTTAGAGAAACAC+TGG | 0.596965 | 1_2:-59478922 | None:intergenic |
| AGAACCAGAACAACATTCAA+CGG | 0.596995 | 1_2:-59479825 | None:intergenic |
| GCTTCAACTTCAGCAGCCAA+AGG | 0.597466 | 1_2:+59480307 | Msa0081020:CDS |
| GGCTCAACTACAGTAACTGC+AGG | 0.599075 | 1_2:+59480397 | Msa0081020:CDS |
| CTAAGTGAACAATTACAAGT+AGG | 0.604657 | 1_2:-59479389 | None:intergenic |
| TGATCCTCTGTCTAATGGAG+TGG | 0.604813 | 1_2:-59479420 | None:intergenic |
| TATATCTGCAGTCTCAACTT+CGG | 0.606961 | 1_2:+59480657 | Msa0081020:CDS |
| TGAGACTAATCAATTTGAAG+AGG | 0.607768 | 1_2:-59480995 | None:intergenic |
| GACAGCTACAATTGAAGCAG+GGG | 0.608684 | 1_2:-59478985 | None:intergenic |
| ACCTGTGGTTACTGAAGTTG+AGG | 0.609370 | 1_2:-59479858 | None:intergenic |
| AGCCTCAATTTCAGTAACCA+CGG | 0.610708 | 1_2:+59480621 | Msa0081020:CDS |
| TCCTCCACTCCATTAGACAG+AGG | 0.612429 | 1_2:+59479416 | Msa0081020:five_prime_UTR |
| AGGTTCCACCGGATTTGCAG+GGG | 0.612836 | 1_2:+59479214 | Msa0081020:five_prime_UTR |
| AATTGTTGAATCTTCAGTCG+AGG | 0.614945 | 1_2:-59480818 | None:intergenic |
| TGATTGTTGTTTGCAAACCA+TGG | 0.619003 | 1_2:-59478351 | None:intergenic |
| AGTCTCAACTTCGGTAACCA+CGG | 0.620579 | 1_2:+59480666 | Msa0081020:CDS |
| AGTCTCAACTTCGGTAACCA+CGG | 0.620579 | 1_2:+59480711 | Msa0081020:CDS |
| AGTGCAGTGTATATAGCAGA+TGG | 0.621336 | 1_2:-59478455 | None:intergenic |
| TGAACAATTACAAGTAGGTG+AGG | 0.622772 | 1_2:-59479384 | None:intergenic |
| CCAAGTATCCTCGAGAGAGG+CGG | 0.626552 | 1_2:-59479048 | None:intergenic |
| TTACAGTACTGCCTAAAGCA+TGG | 0.629269 | 1_2:+59478426 | Msa0081020:five_prime_UTR |
| AACAGTAAAAGGTGAACCTG+TGG | 0.629286 | 1_2:-59479873 | None:intergenic |
| TAATGGCACCATCAAAGAGG+AGG | 0.633025 | 1_2:-59479300 | None:intergenic |
| AGCAGGGGAGACCGAGACAA+AGG | 0.633613 | 1_2:-59478970 | None:intergenic |
| GGATCAACTTCAGTAACCAC+AGG | 0.633996 | 1_2:+59479992 | Msa0081020:CDS |
| GGATCAACTTCAGTAACCAC+AGG | 0.633996 | 1_2:+59480217 | Msa0081020:CDS |
| GGATCAACTTCAGTAACCAC+AGG | 0.633996 | 1_2:+59480487 | Msa0081020:CDS |
| TGCACAAGTTTCACTAAATG+GGG | 0.634873 | 1_2:-59479249 | None:intergenic |
| AACGGTAAAAGAAGAAGCCG+TGG | 0.635063 | 1_2:-59479963 | None:intergenic |
| AACGGTAAAAGAAGAAGCCG+TGG | 0.635063 | 1_2:-59480098 | None:intergenic |
| AAAAGACTTGGATATTGAGA+CGG | 0.635667 | 1_2:-59479498 | None:intergenic |
| ACATGCGGCTACTGAAGTTG+AGG | 0.637223 | 1_2:-59480578 | None:intergenic |
| AACAGTAAAAGAAGAACCAG+TGG | 0.638830 | 1_2:-59480458 | None:intergenic |
| AGACAGCTACAATTGAAGCA+GGG | 0.640274 | 1_2:-59478986 | None:intergenic |
| AACAGTAAAAGTCGAACCTG+TGG | 0.643504 | 1_2:-59480008 | None:intergenic |
| AACAGTAAAAGTCGAACCTG+TGG | 0.643504 | 1_2:-59480233 | None:intergenic |
| AGGGGAGACCGAGACAAAGG+TGG | 0.643565 | 1_2:-59478967 | None:intergenic |
| GACAACCCCTGCAAATCCGG+TGG | 0.647241 | 1_2:-59479219 | None:intergenic |
| ATCTAATGGCACCATCAAAG+AGG | 0.649002 | 1_2:-59479303 | None:intergenic |
| ACCTGTCCTCAGAGCCAAAG+GGG | 0.650165 | 1_2:-59478641 | None:intergenic |
| GGAAACTATTCAAAATGGAG+CGG | 0.651455 | 1_2:-59478874 | None:intergenic |
| AACTGTAAAAGACGAACCTG+TGG | 0.663286 | 1_2:-59480368 | None:intergenic |
| AACGGTAAAAGAAGAACCTG+TGG | 0.668002 | 1_2:-59480188 | None:intergenic |
| AACAGTAAAAGACGAACCTG+TGG | 0.668325 | 1_2:-59480503 | None:intergenic |
| TATAGTAAACAAAGAACCCG+TGG | 0.669103 | 1_2:-59480638 | None:intergenic |
| AACAGTGAAAGAAGAACCCG+TGG | 0.675596 | 1_2:-59480728 | None:intergenic |
| TGTCCAAGTATCCTCGAGAG+AGG | 0.676889 | 1_2:-59479051 | None:intergenic |
| TAAAGTAAAAGAAGAACCCG+TGG | 0.677200 | 1_2:-59480683 | None:intergenic |
| AGAACAAACAGGTGATACAG+TGG | 0.678688 | 1_2:-59479534 | None:intergenic |
| ATCTTCAGTCGAGGCCAATG+AGG | 0.682162 | 1_2:-59480809 | None:intergenic |
| AACAGAGAAAGTAAAGCCTG+TGG | 0.684473 | 1_2:-59479648 | None:intergenic |
| GGAGAACACTACCAGTGTCG+AGG | 0.687107 | 1_2:-59479129 | None:intergenic |
| AACACCAAGAGAAGAACATG+CGG | 0.701473 | 1_2:-59480593 | None:intergenic |
| AACAGTAAAAGAAGAACACG+TGG | 0.707095 | 1_2:-59480053 | None:intergenic |
| AATTGAGGTTGAATCCACCA+AGG | 0.707557 | 1_2:-59478814 | None:intergenic |
| CCTGTCCTCAGAGCCAAAGG+GGG | 0.709648 | 1_2:-59478640 | None:intergenic |
| ACAAACAGGTGATACAGTGG+AGG | 0.715313 | 1_2:-59479531 | None:intergenic |
| GGAAAGCGAGCCTAACACAA+CGG | 0.720344 | 1_2:-59479279 | None:intergenic |
| GGTTGACATCAAGAAGACTG+AGG | 0.735500 | 1_2:-59479024 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATTATAGTATATAAGT+TGG | - | chr1_2:59478536-59478555 | None:intergenic | 10.0% |
| !! | GAATTTGTTTGAATGCAAAA+AGG | - | chr1_2:59478488-59478507 | None:intergenic | 25.0% |
| ! | GGACATTAAGGTTAAATAAT+GGG | - | chr1_2:59478622-59478641 | None:intergenic | 25.0% |
| ! | TTCAAACAACATTATAGCAA+AGG | - | chr1_2:59478727-59478746 | None:intergenic | 25.0% |
| ! | GAAAAGATTGTTGTAAAAGA+TGG | - | chr1_2:59479179-59479198 | None:intergenic | 25.0% |
| !!! | ATTAGATCCTTCACTTTTTT+CGG | + | chr1_2:59479319-59479338 | Msa0081020:five_prime_UTR | 25.0% |
| ! | AATTCAATCATTCAAACAAG+AGG | - | chr1_2:59479594-59479613 | None:intergenic | 25.0% |
| ! | ATCAAGAGAATTAGAATTTG+AGG | - | chr1_2:59479720-59479739 | None:intergenic | 25.0% |
| !! | ATTTCTTGTGATTCTTTTTC+CGG | + | chr1_2:59480874-59480893 | Msa0081020:CDS | 25.0% |
| !!! | TGGAAGCAATTTTAATTCTG+TGG | - | chr1_2:59478334-59478353 | None:intergenic | 30.0% |
| CAGAATTAAAATTGCTTCCA+TGG | + | chr1_2:59478334-59478353 | Msa0081020:five_prime_UTR | 30.0% | |
| !!! | CGTTTTTATTTTCATTGTCG+TGG | - | chr1_2:59478566-59478585 | None:intergenic | 30.0% |
| GGGACATTAAGGTTAAATAA+TGG | - | chr1_2:59478623-59478642 | None:intergenic | 30.0% | |
| ATCTAAATTCGAAAAAGACG+AGG | - | chr1_2:59478901-59478920 | None:intergenic | 30.0% | |
| ! | ACAATCTTTTCTTCAACTTC+AGG | + | chr1_2:59479188-59479207 | Msa0081020:five_prime_UTR | 30.0% |
| GAAAAAAGTGAAGGATCTAA+TGG | - | chr1_2:59479320-59479339 | None:intergenic | 30.0% | |
| CTAAGTGAACAATTACAAGT+AGG | - | chr1_2:59479392-59479411 | None:intergenic | 30.0% | |
| AAAAGACTTGGATATTGAGA+CGG | - | chr1_2:59479501-59479520 | None:intergenic | 30.0% | |
| ACTGAAAATCAAGAACAAAC+AGG | - | chr1_2:59479548-59479567 | None:intergenic | 30.0% | |
| ! | TGATTTTCAGTTTCTTCCTT+TGG | + | chr1_2:59479557-59479576 | Msa0081020:five_prime_UTR | 30.0% |
| TGTTTGAATGATTGAATTCC+TGG | + | chr1_2:59479596-59479615 | Msa0081020:five_prime_UTR | 30.0% | |
| ! | TCTGGAATTGAATATGTGTT+TGG | + | chr1_2:59479782-59479801 | Msa0081020:CDS | 30.0% |
| !!! | TCTTCTTTTACTGTTTCTGT+AGG | + | chr1_2:59480061-59480080 | Msa0081020:CDS | 30.0% |
| TCAACAATTGCAATTGCATT+TGG | + | chr1_2:59480832-59480851 | Msa0081020:CDS | 30.0% | |
| ATCACAAGAAATTTCACAAG+AGG | - | chr1_2:59480866-59480885 | None:intergenic | 30.0% | |
| !! | TGATTGTTGTTTGCAAACCA+TGG | - | chr1_2:59478354-59478373 | None:intergenic | 35.0% |
| !! | AGTTTCTTTTGGAAGGTTCT+TGG | + | chr1_2:59478770-59478789 | Msa0081020:five_prime_UTR | 35.0% |
| TTTGGAAGGTTCTTGGATAT+TGG | + | chr1_2:59478777-59478796 | Msa0081020:five_prime_UTR | 35.0% | |
| !!! | TGGTGTTGTATCATTTTCCT+TGG | + | chr1_2:59478797-59478816 | Msa0081020:five_prime_UTR | 35.0% |
| ! | TGTTGTATCATTTTCCTTGG+TGG | + | chr1_2:59478800-59478819 | Msa0081020:five_prime_UTR | 35.0% |
| ! | GATTCAACCTCAATTTTCAC+TGG | + | chr1_2:59478822-59478841 | Msa0081020:five_prime_UTR | 35.0% |
| TTTGGAGAAAGAACGAATTG+AGG | - | chr1_2:59478850-59478869 | None:intergenic | 35.0% | |
| TCAAAATGGAGCGGATAATT+TGG | - | chr1_2:59478868-59478887 | None:intergenic | 35.0% | |
| GGAAACTATTCAAAATGGAG+CGG | - | chr1_2:59478877-59478896 | None:intergenic | 35.0% | |
| GAGGAGGAAACTATTCAAAA+TGG | - | chr1_2:59478882-59478901 | None:intergenic | 35.0% | |
| TAAATTCGAAAAAGACGAGG+AGG | - | chr1_2:59478898-59478917 | None:intergenic | 35.0% | |
| !! | GAAAGAAGTTGTTGGTGATA+CGG | - | chr1_2:59479153-59479172 | None:intergenic | 35.0% |
| ! | TTTTCTTCAACTTCAGGAGA+AGG | + | chr1_2:59479194-59479213 | Msa0081020:five_prime_UTR | 35.0% |
| TGCACAAGTTTCACTAAATG+GGG | - | chr1_2:59479252-59479271 | None:intergenic | 35.0% | |
| CTGCACAAGTTTCACTAAAT+GGG | - | chr1_2:59479253-59479272 | None:intergenic | 35.0% | |
| TGAACAATTACAAGTAGGTG+AGG | - | chr1_2:59479387-59479406 | None:intergenic | 35.0% | |
| AACATTGATCCTCTGTCTAA+TGG | - | chr1_2:59479428-59479447 | None:intergenic | 35.0% | |
| ! | GTCTCAATATCCAAGTCTTT+TGG | + | chr1_2:59479500-59479519 | Msa0081020:five_prime_UTR | 35.0% |
| ! | TCAATATCCAAGTCTTTTGG+AGG | + | chr1_2:59479503-59479522 | Msa0081020:five_prime_UTR | 35.0% |
| ! | CAATATCCAAGTCTTTTGGA+GGG | + | chr1_2:59479504-59479523 | Msa0081020:five_prime_UTR | 35.0% |
| ATTGAATTCCTGGTTCACTT+TGG | + | chr1_2:59479606-59479625 | Msa0081020:five_prime_UTR | 35.0% | |
| TTTACTTTCTCTGTTTCAGC+TGG | + | chr1_2:59479656-59479675 | Msa0081020:five_prime_UTR | 35.0% | |
| TTCTACAGCAATGACATCAT+TGG | + | chr1_2:59479745-59479764 | Msa0081020:exon | 35.0% | |
| ACAACATTCAACGGAACAAA+GGG | - | chr1_2:59479819-59479838 | None:intergenic | 35.0% | |
| AACAACATTCAACGGAACAA+AGG | - | chr1_2:59479820-59479839 | None:intergenic | 35.0% | |
| AGAACCAGAACAACATTCAA+CGG | - | chr1_2:59479828-59479847 | None:intergenic | 35.0% | |
| !! | AATGTTGTTCTGGTTCTTTC+CGG | + | chr1_2:59479831-59479850 | Msa0081020:CDS | 35.0% |
| TTACTGAAGTTGAGGAAAAC+CGG | - | chr1_2:59479853-59479872 | None:intergenic | 35.0% | |
| !!! | TCACCTTTTACTGTTTCTGT+AGG | + | chr1_2:59479881-59479900 | Msa0081020:CDS | 35.0% |
| TGAAGTTCAAGCTACAGAAA+CGG | - | chr1_2:59479939-59479958 | None:intergenic | 35.0% | |
| ! | TCTTCTTTTACCGTTTCTGT+AGG | + | chr1_2:59479926-59479945 | Msa0081020:intron | 35.0% |
| ! | TGAAGTTGATCCTACAGAAA+CGG | - | chr1_2:59479984-59480003 | None:intergenic | 35.0% |
| !!! | TCGACTTTTACTGTTTCTGT+TGG | + | chr1_2:59480016-59480035 | Msa0081020:CDS | 35.0% |
| AACAGTAAAAGAAGAACACG+TGG | - | chr1_2:59480056-59480075 | None:intergenic | 35.0% | |
| ! | TCTTCTTTTACCGTTTCTGT+AGG | + | chr1_2:59479926-59479945 | Msa0081020:intron | 35.0% |
| ! | TGAAGTTGATCCTACAGAAA+CGG | - | chr1_2:59479984-59480003 | None:intergenic | 35.0% |
| ! | TCTTCTTTTACCGTTTCTGT+AGG | + | chr1_2:59479926-59479945 | Msa0081020:intron | 35.0% |
| ! | TGAAGTTGATCCTACAGAAA+CGG | - | chr1_2:59479984-59480003 | None:intergenic | 35.0% |
| TGAAGTTGAAGCTACAGAAA+CGG | - | chr1_2:59480074-59480093 | None:intergenic | 35.0% | |
| AACGGTAAAAGAAGAACCTT+TGG | - | chr1_2:59480326-59480345 | None:intergenic | 35.0% | |
| TGAAGTTGAAGCTACAGAAA+CGG | - | chr1_2:59480074-59480093 | None:intergenic | 35.0% | |
| ! | TCGTCTTTTACAGTTTCTGT+AGG | + | chr1_2:59480376-59480395 | Msa0081020:CDS | 35.0% |
| ! | TCGTCTTTTACCTTTTCTGT+AGG | + | chr1_2:59480421-59480440 | Msa0081020:CDS | 35.0% |
| AACAGTAAAAGAAGAACCAG+TGG | - | chr1_2:59480461-59480480 | None:intergenic | 35.0% | |
| TATAGTAAACAAAGAACCCG+TGG | - | chr1_2:59480641-59480660 | None:intergenic | 35.0% | |
| TATATCTGCAGTCTCAACTT+CGG | + | chr1_2:59480657-59480676 | Msa0081020:CDS | 35.0% | |
| TAAAGTAAAAGAAGAACCCG+TGG | - | chr1_2:59480686-59480705 | None:intergenic | 35.0% | |
| TTTATCTGCAGTCTCAACTT+CGG | + | chr1_2:59480702-59480721 | Msa0081020:CDS | 35.0% | |
| AATTGTTGAATCTTCAGTCG+AGG | - | chr1_2:59480821-59480840 | None:intergenic | 35.0% | |
| ! | TGATTCTTTTTCCGGTTCTT+TGG | + | chr1_2:59480882-59480901 | Msa0081020:CDS | 35.0% |
| !! | TCCGGTTCTTTGGTTATTTT+CGG | + | chr1_2:59480892-59480911 | Msa0081020:CDS | 35.0% |
| TTACAGTACTGCCTAAAGCA+TGG | + | chr1_2:59478426-59478445 | Msa0081020:five_prime_UTR | 40.0% | |
| GTGTATATAGCAGATGGTCT+AGG | - | chr1_2:59478452-59478471 | None:intergenic | 40.0% | |
| AGTGCAGTGTATATAGCAGA+TGG | - | chr1_2:59478458-59478477 | None:intergenic | 40.0% | |
| TTAACCTTAATGTCCCCCTT+TGG | + | chr1_2:59478627-59478646 | Msa0081020:five_prime_UTR | 40.0% | |
| AAAGCAAAGAAGGCTATCAC+TGG | - | chr1_2:59478687-59478706 | None:intergenic | 40.0% | |
| GTCACTAGTGAAAGCAAAGA+AGG | - | chr1_2:59478697-59478716 | None:intergenic | 40.0% | |
| TTGTTTGAATGCTTCTGAGC+TGG | + | chr1_2:59478738-59478757 | Msa0081020:five_prime_UTR | 40.0% | |
| AATTGAGGTTGAATCCACCA+AGG | - | chr1_2:59478817-59478836 | None:intergenic | 40.0% | |
| TGAACCTGTTAGAGAAACAC+TGG | - | chr1_2:59478925-59478944 | None:intergenic | 40.0% | |
| GATTTCTTCCACCTTTGTCT+CGG | + | chr1_2:59478959-59478978 | Msa0081020:five_prime_UTR | 40.0% | |
| AGACAGCTACAATTGAAGCA+GGG | - | chr1_2:59478989-59479008 | None:intergenic | 40.0% | |
| AAGACAGCTACAATTGAAGC+AGG | - | chr1_2:59478990-59479009 | None:intergenic | 40.0% | |
| ! | AAAAGTTGTTGTTGCTGCAG+AGG | - | chr1_2:59479108-59479127 | None:intergenic | 40.0% |
| !! | AACAACTTTTTCCTCGACAC+TGG | + | chr1_2:59479118-59479137 | Msa0081020:five_prime_UTR | 40.0% |
| GATGGCAAGAAAGAAGTTGT+TGG | - | chr1_2:59479161-59479180 | None:intergenic | 40.0% | |
| GCTGCACAAGTTTCACTAAA+TGG | - | chr1_2:59479254-59479273 | None:intergenic | 40.0% | |
| ATCTAATGGCACCATCAAAG+AGG | - | chr1_2:59479306-59479325 | None:intergenic | 40.0% | |
| CAAGCAACCGAAAAAAGTGA+AGG | - | chr1_2:59479329-59479348 | None:intergenic | 40.0% | |
| !!! | ACTTTTTTCGGTTGCTTGCT+CGG | + | chr1_2:59479331-59479350 | Msa0081020:five_prime_UTR | 40.0% |
| TGGGGAAACTATTAAGGAAG+TGG | - | chr1_2:59479360-59479379 | None:intergenic | 40.0% | |
| GGAAGTTGGGGAAACTATTA+AGG | - | chr1_2:59479366-59479385 | None:intergenic | 40.0% | |
| TACAAGTAGGTGAGGAAGTT+GGG | - | chr1_2:59479379-59479398 | None:intergenic | 40.0% | |
| TTACAAGTAGGTGAGGAAGT+TGG | - | chr1_2:59479380-59479399 | None:intergenic | 40.0% | |
| AGAACAAACAGGTGATACAG+TGG | - | chr1_2:59479537-59479556 | None:intergenic | 40.0% | |
| AGAGGAAGAAGTGAAACCAA+AGG | - | chr1_2:59479576-59479595 | None:intergenic | 40.0% | |
| GATGAAAACCAAAGTGAACC+AGG | - | chr1_2:59479617-59479636 | None:intergenic | 40.0% | |
| AACAGAGAAAGTAAAGCCTG+TGG | - | chr1_2:59479651-59479670 | None:intergenic | 40.0% | |
| TTGGTTTCTGTAGACTGTTC+TGG | + | chr1_2:59479764-59479783 | Msa0081020:CDS | 40.0% | |
| TGTTCCGTTGAATGTTGTTC+TGG | + | chr1_2:59479821-59479840 | Msa0081020:CDS | 40.0% | |
| AACAGTAAAAGGTGAACCTG+TGG | - | chr1_2:59479876-59479895 | None:intergenic | 40.0% | |
| GAGCCTACAGAAACAGTAAA+AGG | - | chr1_2:59479887-59479906 | None:intergenic | 40.0% | |
| AACGGTAAAAGAAGAACCTG+TGG | - | chr1_2:59479921-59479940 | None:intergenic | 40.0% | |
| AACAGTAAAAGTCGAACCTG+TGG | - | chr1_2:59480011-59480030 | None:intergenic | 40.0% | |
| GGATCAACTTCAGTAACTAC+AGG | + | chr1_2:59480127-59480146 | Msa0081020:CDS | 40.0% | |
| ! | TCGTCTTTTACCGTTTCTGT+AGG | + | chr1_2:59480151-59480170 | Msa0081020:CDS | 40.0% |
| TGTAGTTGAGCCTACAGAAA+CGG | - | chr1_2:59480164-59480183 | None:intergenic | 40.0% | |
| AACGGTAAAAGAAGAACCTG+TGG | - | chr1_2:59479921-59479940 | None:intergenic | 40.0% | |
| AACAGTAAAAGTCGAACCTG+TGG | - | chr1_2:59480011-59480030 | None:intergenic | 40.0% | |
| AACTGTAAAAGACGAACCTG+TGG | - | chr1_2:59480371-59480390 | None:intergenic | 40.0% | |
| TGAAGTTGAGCCTACAGAAA+AGG | - | chr1_2:59479894-59479913 | None:intergenic | 40.0% | |
| AACAGTAAAAGACGAACCTG+TGG | - | chr1_2:59480506-59480525 | None:intergenic | 40.0% | |
| ! | GGTTCGTCTTTTACTGTTTC+TGG | + | chr1_2:59480508-59480527 | Msa0081020:CDS | 40.0% |
| AACACCAAGAGAAGAACATG+CGG | - | chr1_2:59480596-59480615 | None:intergenic | 40.0% | |
| AGCCTCAATTTCAGTAACCA+CGG | + | chr1_2:59480621-59480640 | Msa0081020:CDS | 40.0% | |
| GGGTTCTTCTTTCACTGTTT+CGG | + | chr1_2:59480732-59480751 | Msa0081020:CDS | 40.0% | |
| TCTTCTTTCACTGTTTCGGT+AGG | + | chr1_2:59480736-59480755 | Msa0081020:CDS | 40.0% | |
| ! | AGGCTCTACTTCGATGTTTT+TGG | + | chr1_2:59480756-59480775 | Msa0081020:CDS | 40.0% |
| AAAGACAACAGCAGCGATAT+CGG | - | chr1_2:59480788-59480807 | None:intergenic | 40.0% | |
| ! | TGCTGTTGTCTTTTCCTCAT+TGG | + | chr1_2:59480795-59480814 | Msa0081020:CDS | 40.0% |
| GCCGAAAATAACCAAAGAAC+CGG | - | chr1_2:59480896-59480915 | None:intergenic | 40.0% | |
| !! | TTCAGAAACAAGTGCCGAAA+AGG | - | chr1_2:59480956-59480975 | None:intergenic | 40.0% |
| ! | TGGCTGGAGTTTCTTTTGGA+AGG | + | chr1_2:59478763-59478782 | Msa0081020:five_prime_UTR | 45.0% |
| TGAGGAGCCAGTGAAAATTG+AGG | - | chr1_2:59478832-59478851 | None:intergenic | 45.0% | |
| GATGCCAGTGTTTCTCTAAC+AGG | + | chr1_2:59478918-59478937 | Msa0081020:five_prime_UTR | 45.0% | |
| GACAGCTACAATTGAAGCAG+GGG | - | chr1_2:59478988-59479007 | None:intergenic | 45.0% | |
| GAAGACTGAGGAACAGAATG+AGG | - | chr1_2:59479015-59479034 | None:intergenic | 45.0% | |
| GGTTGACATCAAGAAGACTG+AGG | - | chr1_2:59479027-59479046 | None:intergenic | 45.0% | |
| TGCTGCAGAGGATGAAAAGA+AGG | - | chr1_2:59479096-59479115 | None:intergenic | 45.0% | |
| GCAGCATTAACCGTTGTGTT+AGG | + | chr1_2:59479269-59479288 | Msa0081020:five_prime_UTR | 45.0% | |
| TAATGGCACCATCAAAGAGG+AGG | - | chr1_2:59479303-59479322 | None:intergenic | 45.0% | |
| !!! | CTTTTTTCGGTTGCTTGCTC+GGG | + | chr1_2:59479332-59479351 | Msa0081020:five_prime_UTR | 45.0% |
| ACAAGTAGGTGAGGAAGTTG+GGG | - | chr1_2:59479378-59479397 | None:intergenic | 45.0% | |
| TGATCCTCTGTCTAATGGAG+TGG | - | chr1_2:59479423-59479442 | None:intergenic | 45.0% | |
| TGCTTCTGACTCAGAGTTGT+TGG | + | chr1_2:59479466-59479485 | Msa0081020:five_prime_UTR | 45.0% | |
| ACAAACAGGTGATACAGTGG+AGG | - | chr1_2:59479534-59479553 | None:intergenic | 45.0% | |
| TCATCCACTTCAGTAACCAC+AGG | + | chr1_2:59479632-59479651 | Msa0081020:five_prime_UTR | 45.0% | |
| AAAGCCTGTGGTTACTGAAG+TGG | - | chr1_2:59479639-59479658 | None:intergenic | 45.0% | |
| TTCAACGGAACAAAGGGAAG+AGG | - | chr1_2:59479813-59479832 | None:intergenic | 45.0% | |
| TCCTCAACTTCAGTAACCAC+AGG | + | chr1_2:59479857-59479876 | Msa0081020:CDS | 45.0% | |
| ACCTGTGGTTACTGAAGTTG+AGG | - | chr1_2:59479861-59479880 | None:intergenic | 45.0% | |
| AGCTTGAACTTCAGTAGCCA+CGG | + | chr1_2:59479946-59479965 | Msa0081020:intron | 45.0% | |
| AACGGTAAAAGAAGAAGCCG+TGG | - | chr1_2:59479966-59479985 | None:intergenic | 45.0% | |
| GGATCAACTTCAGTAACCAC+AGG | + | chr1_2:59479992-59480011 | Msa0081020:CDS | 45.0% | |
| AGCTTCAACTTCAGTAGCCA+CGG | + | chr1_2:59480081-59480100 | Msa0081020:CDS | 45.0% | |
| AACGGTAAAAGAAGAAGCCG+TGG | - | chr1_2:59479966-59479985 | None:intergenic | 45.0% | |
| GGATCAACTTCAGTAACCAC+AGG | + | chr1_2:59479992-59480011 | Msa0081020:CDS | 45.0% | |
| GGATCAACTTCAGTAACCAC+AGG | + | chr1_2:59479992-59480011 | Msa0081020:CDS | 45.0% | |
| GCCTCAATTTCAGTAACCAC+GGG | + | chr1_2:59480622-59480641 | Msa0081020:CDS | 45.0% | |
| ACCCGTGGTTACTGAAATTG+AGG | - | chr1_2:59480626-59480645 | None:intergenic | 45.0% | |
| AGTCTCAACTTCGGTAACCA+CGG | + | chr1_2:59480666-59480685 | Msa0081020:CDS | 45.0% | |
| AGTCTCAACTTCGGTAACCA+CGG | + | chr1_2:59480666-59480685 | Msa0081020:CDS | 45.0% | |
| AACAGTGAAAGAAGAACCCG+TGG | - | chr1_2:59480731-59480750 | None:intergenic | 45.0% | |
| ! | CTCGGGCTTTTCTTCCTTTT+CGG | + | chr1_2:59480939-59480958 | Msa0081020:CDS | 45.0% |
| GATGGTCTAGGCCATGCTTT+AGG | - | chr1_2:59478440-59478459 | None:intergenic | 50.0% | |
| AGAGCCAAAGGGGGACATTA+AGG | - | chr1_2:59478634-59478653 | None:intergenic | 50.0% | |
| AACCTGTCCTCAGAGCCAAA+GGG | - | chr1_2:59478645-59478664 | None:intergenic | 50.0% | |
| AAACCTGTCCTCAGAGCCAA+AGG | - | chr1_2:59478646-59478665 | None:intergenic | 50.0% | |
| !!! | TGGCTCTGAGGACAGGTTTT+TGG | + | chr1_2:59478647-59478666 | Msa0081020:five_prime_UTR | 50.0% |
| !! | CTCTGAGGACAGGTTTTTGG+AGG | + | chr1_2:59478650-59478669 | Msa0081020:five_prime_UTR | 50.0% |
| !! | GAGGACAGGTTTTTGGAGGA+TGG | + | chr1_2:59478654-59478673 | Msa0081020:five_prime_UTR | 50.0% |
| TGAATGCTTCTGAGCTGGCT+TGG | + | chr1_2:59478743-59478762 | Msa0081020:five_prime_UTR | 50.0% | |
| ! | GGCTTGGCTGGAGTTTCTTT+TGG | + | chr1_2:59478759-59478778 | Msa0081020:five_prime_UTR | 50.0% |
| TGTCCAAGTATCCTCGAGAG+AGG | - | chr1_2:59479054-59479073 | None:intergenic | 50.0% | |
| TGGACAGCATCAGATGCTTC+TGG | + | chr1_2:59479068-59479087 | Msa0081020:five_prime_UTR | 50.0% | |
| ACTTCAGGAGAAGGTTCCAC+CGG | + | chr1_2:59479203-59479222 | Msa0081020:five_prime_UTR | 50.0% | |
| AAGGTTCCACCGGATTTGCA+GGG | + | chr1_2:59479213-59479232 | Msa0081020:five_prime_UTR | 50.0% | |
| TCAGACAACCCCTGCAAATC+CGG | - | chr1_2:59479225-59479244 | None:intergenic | 50.0% | |
| GGAAAGCGAGCCTAACACAA+CGG | - | chr1_2:59479282-59479301 | None:intergenic | 50.0% | |
| CTCGCTTTCCTCCTCTTTGA+TGG | + | chr1_2:59479292-59479311 | Msa0081020:five_prime_UTR | 50.0% | |
| TCCTCCACTCCATTAGACAG+AGG | + | chr1_2:59479416-59479435 | Msa0081020:five_prime_UTR | 50.0% | |
| TCCTCTGTCTAATGGAGTGG+AGG | - | chr1_2:59479420-59479439 | None:intergenic | 50.0% | |
| GGTTCACCCTCCAAAAGACT+TGG | - | chr1_2:59479513-59479532 | None:intergenic | 50.0% | |
| AGACCAAGAACGACGAAGCA+GGG | - | chr1_2:59479682-59479701 | None:intergenic | 50.0% | |
| GCTTCAACTTCAGCAGCCAA+AGG | + | chr1_2:59480307-59480326 | Msa0081020:CDS | 50.0% | |
| GGCTCAACTACAGTAACTGC+AGG | + | chr1_2:59480397-59480416 | Msa0081020:CDS | 50.0% | |
| ACCTCAACTTCAGTAGCTGC+AGG | + | chr1_2:59480532-59480551 | Msa0081020:CDS | 50.0% | |
| ACCTGCAGCTACTGAAGTTG+AGG | - | chr1_2:59480536-59480555 | None:intergenic | 50.0% | |
| GGCTACTGAAGTTGAGGCTA+CGG | - | chr1_2:59480575-59480594 | None:intergenic | 50.0% | |
| ACATGCGGCTACTGAAGTTG+AGG | - | chr1_2:59480581-59480600 | None:intergenic | 50.0% | |
| GTAGCCGCATGTTCTTCTCT+TGG | + | chr1_2:59480589-59480608 | Msa0081020:CDS | 50.0% | |
| GTCTCAACTTCGGTAACCAC+GGG | + | chr1_2:59480667-59480686 | Msa0081020:CDS | 50.0% | |
| GTCTCAACTTCGGTAACCAC+GGG | + | chr1_2:59480667-59480686 | Msa0081020:CDS | 50.0% | |
| ATCTTCAGTCGAGGCCAATG+AGG | - | chr1_2:59480812-59480831 | None:intergenic | 50.0% | |
| !! | GGTTATTTTCGGCTCTGCTG+AGG | + | chr1_2:59480903-59480922 | Msa0081020:CDS | 50.0% |
| !! | AATGTCCCCCTTTGGCTCTG+AGG | + | chr1_2:59478635-59478654 | Msa0081020:five_prime_UTR | 55.0% |
| ACCTGTCCTCAGAGCCAAAG+GGG | - | chr1_2:59478644-59478663 | None:intergenic | 55.0% | |
| CCAAGTATCCTCGAGAGAGG+CGG | - | chr1_2:59479051-59479070 | None:intergenic | 55.0% | |
| GGAGAACACTACCAGTGTCG+AGG | - | chr1_2:59479132-59479151 | None:intergenic | 55.0% | |
| GAAGGTTCCACCGGATTTGC+AGG | + | chr1_2:59479212-59479231 | Msa0081020:five_prime_UTR | 55.0% | |
| AGGTTCCACCGGATTTGCAG+GGG | + | chr1_2:59479214-59479233 | Msa0081020:five_prime_UTR | 55.0% | |
| GAGACCAAGAACGACGAAGC+AGG | - | chr1_2:59479683-59479702 | None:intergenic | 55.0% | |
| GGCTCAACTTCAGTAGCCAC+AGG | + | chr1_2:59479902-59479921 | Msa0081020:CDS | 55.0% | |
| GGCTCAACTACAGTTGCCAC+AGG | + | chr1_2:59480172-59480191 | Msa0081020:CDS | 55.0% | |
| GCTTCAACTTCAGCAGCCAC+AGG | + | chr1_2:59480352-59480371 | Msa0081020:CDS | 55.0% | |
| GGCTCAACTTCAGTTGCCAC+TGG | + | chr1_2:59480442-59480461 | Msa0081020:CDS | 55.0% | |
| CCTGTCCTCAGAGCCAAAGG+GGG | - | chr1_2:59478643-59478662 | None:intergenic | 60.0% | |
| !! | TGCTTCTGAGCTGGCTTGGC+TGG | + | chr1_2:59478747-59478766 | Msa0081020:five_prime_UTR | 60.0% |
| AGGGGAGACCGAGACAAAGG+TGG | - | chr1_2:59478970-59478989 | None:intergenic | 60.0% | |
| AGCAGGGGAGACCGAGACAA+AGG | - | chr1_2:59478973-59478992 | None:intergenic | 60.0% | |
| AGTATCCTCGAGAGAGGCGG+AGG | - | chr1_2:59479048-59479067 | None:intergenic | 60.0% | |
| CCGCCTCTCTCGAGGATACT+TGG | + | chr1_2:59479048-59479067 | Msa0081020:five_prime_UTR | 60.0% | |
| GACAACCCCTGCAAATCCGG+TGG | - | chr1_2:59479222-59479241 | None:intergenic | 60.0% | |
| TGGCCCTGCTTCGTCGTTCT+TGG | + | chr1_2:59479676-59479695 | Msa0081020:five_prime_UTR | 60.0% | |
| TGAGGCCAGAGGCTCAAGCT+CGG | + | chr1_2:59480921-59480940 | Msa0081020:CDS | 60.0% | |
| AAAGCCCGAGCTTGAGCCTC+TGG | - | chr1_2:59480929-59480948 | None:intergenic | 60.0% | |
| !! | CCCCCTTTGGCTCTGAGGAC+AGG | + | chr1_2:59478640-59478659 | Msa0081020:five_prime_UTR | 65.0% |
| GTCAACCTCCGCCTCTCTCG+AGG | + | chr1_2:59479040-59479059 | Msa0081020:five_prime_UTR | 65.0% | |
| TTCGGCTCTGCTGAGGCCAG+AGG | + | chr1_2:59480910-59480929 | Msa0081020:CDS | 65.0% | |
| GAGGCCAGAGGCTCAAGCTC+GGG | + | chr1_2:59480922-59480941 | Msa0081020:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 59478312 | 59481008 | 59478312 | ID=Msa0081020;Name=Msa0081020 |
| chr1_2 | mRNA | 59478312 | 59481008 | 59478312 | ID=Msa0081020-mRNA-1;Parent=Msa0081020;Name=Msa0081020-mRNA-1;_AED=0.15;_eAED=0.48;_QI=1443|0|0.5|1|0|0|2|0|405 |
| chr1_2 | exon | 59478312 | 59479923 | 59478312 | ID=Msa0081020-mRNA-1:exon:19243;Parent=Msa0081020-mRNA-1 |
| chr1_2 | exon | 59479960 | 59481008 | 59479960 | ID=Msa0081020-mRNA-1:exon:19244;Parent=Msa0081020-mRNA-1 |
| chr1_2 | five_prime_UTR | 59478312 | 59479754 | 59478312 | ID=Msa0081020-mRNA-1:five_prime_utr;Parent=Msa0081020-mRNA-1 |
| chr1_2 | CDS | 59479755 | 59479923 | 59479755 | ID=Msa0081020-mRNA-1:cds;Parent=Msa0081020-mRNA-1 |
| chr1_2 | CDS | 59479960 | 59481008 | 59479960 | ID=Msa0081020-mRNA-1:cds;Parent=Msa0081020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
