AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0827070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0827070 MtrunA17_Chr4g0045091 92.439 410 4 1 1 383 1 410 0.0 766
Msa0827070 MtrunA17_Chr3g0133761 44.938 405 188 7 11 383 5 406 6.97e-110 327
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0827070 AT2G15695.1 51.064 423 155 8 9 383 2 420 5.17e-136 395
Msa0827070 AT5G44250.1 42.611 406 193 10 11 383 5 403 4.11e-101 305
Msa0827070 AT5G44250.2 45.277 307 157 7 81 383 3 302 3.81e-84 258

Find 114 sgRNAs with CRISPR-Local

Find 319 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTGTTGTCTTCAGAATTT+TGG 0.059999 5_3:-68064702 Msa0827070:intron
CTAGATGTTACAAGTGATTT+TGG 0.148183 5_3:-68064969 Msa0827070:CDS
TTGTTTAGGAACTGTGTTTC+TGG 0.150597 5_3:-68065014 Msa0827070:CDS
AGCTGCTGTGAGCCATTTAT+TGG 0.192871 5_3:-68064425 Msa0827070:CDS
AATTCACGTGTTTCGCTTAC+TGG 0.198836 5_3:-68067579 Msa0827070:five_prime_UTR
CCTAAAACTAAAGGCCAATT+TGG 0.216009 5_3:-68067812 Msa0827070:five_prime_UTR
TCCCAACCTTCAACATTCTT+TGG 0.240471 5_3:+68064085 None:intergenic
ATGCGTTTAATTCCTCTAAA+AGG 0.247530 5_3:+68064016 None:intergenic
GTTGACCTTTACTCCTCTTT+AGG 0.255986 5_3:-68067404 Msa0827070:CDS
GATATGAATATGATAGATTT+TGG 0.260174 5_3:-68063892 Msa0827070:three_prime_UTR
ACTTACTGTTAGAAATAAAC+TGG 0.276365 5_3:-68063674 Msa0827070:three_prime_UTR
TCCTTTGTCTCGTAAAATTC+AGG 0.280019 5_3:+68063916 None:intergenic
TCTGGACATATATATGATTC+TGG 0.283472 5_3:-68064996 Msa0827070:CDS
CGCTGTGAGCGCTGATGCTT+GGG 0.291912 5_3:+68064140 None:intergenic
AACAACAATGATAGAGAATC+TGG 0.310572 5_3:-68064211 Msa0827070:CDS
AGTTCCACAAAACCTGTTAC+AGG 0.311517 5_3:-68067432 Msa0827070:CDS
ATATATTTGTGGGAATAAAT+AGG 0.316543 5_3:-68063508 Msa0827070:three_prime_UTR
GACCATCAAAGCTTGTTTCT+TGG 0.325748 5_3:-68064905 Msa0827070:CDS
GTTGAATTTGAAGATTGATA+TGG 0.338521 5_3:-68063796 Msa0827070:three_prime_UTR
GGTCAACGAATTCCTGTAAC+AGG 0.339829 5_3:+68067420 None:intergenic
AATAAGAATGAATAATAAAA+TGG 0.342130 5_3:+68067754 None:intergenic
GGTAATATAATTGTTTGAAA+TGG 0.347177 5_3:-68063621 Msa0827070:three_prime_UTR
ACACGGCCTTCTCCAATAAA+TGG 0.355167 5_3:+68064413 None:intergenic
AGCATGACTGTCAATTGTTT+AGG 0.377794 5_3:-68065028 Msa0827070:CDS
ATCAGCGCTCACAGCGTCCT+TGG 0.388256 5_3:-68064133 Msa0827070:CDS
GAGTTTGACAGAAGTTGATA+TGG 0.397401 5_3:-68063390 Msa0827070:three_prime_UTR
ACCATCAAAGCTTGTTTCTT+GGG 0.398334 5_3:-68064904 Msa0827070:CDS
TCCGAACATAAAATGAGAAA+TGG 0.399424 5_3:+68064675 None:intergenic
GTAGCAAAGTCTGTTGCATC+TGG 0.399698 5_3:-68064882 Msa0827070:CDS
TAGACACTGGATATCCAAAT+TGG 0.403204 5_3:+68067798 None:intergenic
ACCCAAGAAACAAGCTTTGA+TGG 0.403500 5_3:+68064903 None:intergenic
GGCTCACAGCAGCTCTGTAT+TGG 0.405682 5_3:+68064434 None:intergenic
AATCTCAATCAGCTGATCAT+TGG 0.409867 5_3:-68064830 Msa0827070:CDS
GCCGGCCGTTGTATCGTATC+TGG 0.415002 5_3:-68063858 Msa0827070:three_prime_UTR
ACCTTTACTCCTCTTTAGGT+TGG 0.415566 5_3:-68067400 Msa0827070:CDS
CGAGAAAGAACTGGTATTGA+TGG 0.422478 5_3:-68064361 Msa0827070:CDS
GTAAGAAAAGCAGAATATTC+CGG 0.423883 5_3:-68063441 Msa0827070:three_prime_UTR
GAATCGTTGTAATCTTTGCT+TGG 0.425804 5_3:-68067460 Msa0827070:CDS
TGATTGCCGTAGATATAAAC+AGG 0.428325 5_3:-68063745 Msa0827070:three_prime_UTR
AGAAACAAGCTTTGATGGTC+CGG 0.428964 5_3:+68064908 None:intergenic
AATCGTTGTAATCTTTGCTT+GGG 0.431280 5_3:-68067459 Msa0827070:CDS
ACGCTGTGAGCGCTGATGCT+TGG 0.436180 5_3:+68064139 None:intergenic
TCAGCGCTCACAGCGTCCTT+GGG 0.444207 5_3:-68064132 Msa0827070:CDS
TACGAGGCGGTAACATCTAC+TGG 0.455529 5_3:-68067511 Msa0827070:CDS
ATCGCTATGCGTGGAGTTGA+AGG 0.456928 5_3:-68067542 Msa0827070:exon
TGAGGAAAGTGCGGTGCCAT+TGG 0.467523 5_3:-68065681 Msa0827070:CDS
AATTAATTGCAACTTTCTGC+AGG 0.468910 5_3:+68064305 None:intergenic
TGATCACCTGTTTATATCTA+CGG 0.470526 5_3:+68063739 None:intergenic
ATAATTGTTGTCACTCAGAA+AGG 0.471723 5_3:-68063710 Msa0827070:three_prime_UTR
TGGGAAGCTAGGAGCACAAA+CGG 0.476633 5_3:+68064159 None:intergenic
TTGTGTCTGTATATATTTGT+GGG 0.477753 5_3:-68063518 Msa0827070:three_prime_UTR
TTGTTATGTCCTGCTGAACT+AGG 0.479809 5_3:+68064229 None:intergenic
TAACAGTGATGGCTTTGAAT+CGG 0.486402 5_3:+68067657 None:intergenic
TCCAAAGAATGTTGAAGGTT+GGG 0.486461 5_3:-68064086 Msa0827070:CDS
AAGAGAATTCCAACCTAAAG+AGG 0.487518 5_3:+68067391 None:intergenic
AAAGTCTGTTGCATCTGGTT+TGG 0.487705 5_3:-68064877 Msa0827070:CDS
GGTTGCGATGATTCAACTAT+CGG 0.504787 5_3:-68063826 Msa0827070:three_prime_UTR
TGTGTTCCAAAGAATGTTGA+AGG 0.505151 5_3:-68064091 Msa0827070:CDS
TCTTCTTTCTGTTCGTCCCG+TGG 0.505476 5_3:+68064184 None:intergenic
TAATTGTTGTCACTCAGAAA+GGG 0.506377 5_3:-68063709 Msa0827070:three_prime_UTR
TTTAGAGGAATTAAACGCAT+TGG 0.506775 5_3:-68064013 Msa0827070:CDS
ATTCACGTGTTTCGCTTACT+GGG 0.507630 5_3:-68067578 Msa0827070:five_prime_UTR
TCCAACCTAAAGAGGAGTAA+AGG 0.510951 5_3:+68067399 None:intergenic
AATAATAAAATGGTGGGTGA+TGG 0.512020 5_3:+68067764 None:intergenic
ACAGCAGCTCTGTATTGGAT+TGG 0.516355 5_3:+68064439 None:intergenic
ATACTTGAACGAGAAAGAAC+TGG 0.518031 5_3:-68064370 Msa0827070:CDS
GAAACAAGCTTTGATGGTCC+GGG 0.522040 5_3:+68064909 None:intergenic
AAATCACTTGTAACATCTAG+TGG 0.525521 5_3:+68064972 None:intergenic
ATGCACAGCTCCACTCAACT+TGG 0.526381 5_3:-68065145 Msa0827070:intron
TCAATCAGCTGATCATTGGC+AGG 0.527299 5_3:-68064826 Msa0827070:CDS
AAGAATGAATAATAAAATGG+TGG 0.527859 5_3:+68067757 None:intergenic
TCAAACAATTATATTACCTA+GGG 0.531119 5_3:+68063626 None:intergenic
GCGCTGATGCTTGGGAAGCT+AGG 0.531134 5_3:+68064148 None:intergenic
TTTGTGTCTGTATATATTTG+TGG 0.536831 5_3:-68063519 Msa0827070:three_prime_UTR
AACTGGGTGATGTTTGACTA+AGG 0.537810 5_3:-68063657 Msa0827070:three_prime_UTR
CTCTTCATCCAGGTTCAATG+AGG 0.542042 5_3:-68065699 Msa0827070:intron
CCTTCCATTGCAAAAGTGCC+CGG 0.550129 5_3:-68064927 Msa0827070:CDS
ACACGAATCCCTAAAACTAA+AGG 0.551875 5_3:-68067821 Msa0827070:five_prime_UTR
GTTGCGATGATTCAACTATC+GGG 0.555172 5_3:-68063825 Msa0827070:three_prime_UTR
TTCCAAAGAATGTTGAAGGT+TGG 0.557791 5_3:-68064087 Msa0827070:CDS
TGTGAGCCATTTATTGGAGA+AGG 0.562192 5_3:-68064419 Msa0827070:CDS
GCCAGATACGATACAACGGC+CGG 0.565479 5_3:+68063857 None:intergenic
TTCAAACAATTATATTACCT+AGG 0.572767 5_3:+68063625 None:intergenic
AATTGCATTACCAAGTTGAG+TGG 0.572964 5_3:+68065135 None:intergenic
CAATCAGAAAATAACAGTGA+TGG 0.574090 5_3:+68067646 None:intergenic
GGGAAGCTAGGAGCACAAAC+GGG 0.575953 5_3:+68064160 None:intergenic
GAATAAATAGGCCATGTTTG+AGG 0.576240 5_3:-68063496 Msa0827070:three_prime_UTR
AGAATGAATAATAAAATGGT+GGG 0.578892 5_3:+68067758 None:intergenic
ATAGAGAATCTGGGATTCCA+CGG 0.590079 5_3:-68064201 Msa0827070:CDS
TTAAACGCATTGGTCGCTCT+AGG 0.593892 5_3:-68064003 Msa0827070:CDS
ACAGAAGTTGATATGGCGTA+TGG 0.600105 5_3:-68063383 Msa0827070:three_prime_UTR
TTGTCACTCAGAAAGGGGAG+TGG 0.607190 5_3:-68063703 Msa0827070:three_prime_UTR
ATACAAATGCAGCTTAGTGA+AGG 0.607255 5_3:-68065171 Msa0827070:intron
ACGAGGCGGTAACATCTACT+GGG 0.608927 5_3:-68067510 Msa0827070:CDS
AAACACGACACTGATTTCAA+AGG 0.610001 5_3:-68067482 Msa0827070:CDS
ACAACAATGATAGAGAATCT+GGG 0.610595 5_3:-68064210 Msa0827070:CDS
AATTGTTGTCACTCAGAAAG+GGG 0.610604 5_3:-68063708 Msa0827070:three_prime_UTR
GTTGAAGGTTGTGCCGTACG+AGG 0.611614 5_3:-68067527 Msa0827070:CDS
ATAATAAAATGGTGGGTGAT+GGG 0.612121 5_3:+68067765 None:intergenic
TCTCATATCATCGCTATGCG+TGG 0.615765 5_3:-68067551 Msa0827070:exon
TATCGTATCTGGCAGTGCAA+TGG 0.622553 5_3:-68063847 Msa0827070:three_prime_UTR
GTAGATGTTACCGCCTCGTA+CGG 0.628127 5_3:+68067514 None:intergenic
TTTGTGGGAATCGGAATGGG+AGG 0.631152 5_3:-68064051 Msa0827070:CDS
TAGAGAATCTGGGATTCCAC+GGG 0.635772 5_3:-68064200 Msa0827070:CDS
AATCAAACAAAGTAAAACAC+CGG 0.640359 5_3:+68063422 None:intergenic
GACTAAGGTAACTACTCCCT+AGG 0.640949 5_3:-68063642 Msa0827070:three_prime_UTR
CTTACTGTTAGAAATAAACT+GGG 0.641712 5_3:-68063673 Msa0827070:three_prime_UTR
CTGAGAAGCTCATCTCACGT+TGG 0.660450 5_3:-68064567 Msa0827070:intron
GAAGGTTGTGCCGTACGAGG+CGG 0.663173 5_3:-68067524 Msa0827070:CDS
CAGGTTCAATGAGGAAAGTG+CGG 0.674947 5_3:-68065690 Msa0827070:CDS
TGGAAGGGTGTAGAGAAAAG+CGG 0.685152 5_3:+68064943 None:intergenic
GGGTGATGCTGAGTAGACAC+TGG 0.688398 5_3:+68067785 None:intergenic
CACTGCCAGATACGATACAA+CGG 0.709393 5_3:+68063853 None:intergenic
CGAGGCGGTAACATCTACTG+GGG 0.743069 5_3:-68067509 Msa0827070:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAGAATGAATAATAAAA+TGG + chr5_3:68063457-68063476 None:intergenic 10.0%
!!! TTTGAAGCTTTTTTTTTTTA+TGG + chr5_3:68063589-68063608 None:intergenic 15.0%
!!! AATCTTTGTTTAGTAATTTT+TGG - chr5_3:68064031-68064050 Msa0827070:CDS 15.0%
!! TTGTCAATTTACAATTAATT+AGG - chr5_3:68065626-68065645 Msa0827070:intron 15.0%
!! AGAATGAATAATAAAATGGT+GGG + chr5_3:68063453-68063472 None:intergenic 20.0%
!! AAGAATGAATAATAAAATGG+TGG + chr5_3:68063454-68063473 None:intergenic 20.0%
!!! CATTTTTTTTTCAATTTCGT+TGG - chr5_3:68063894-68063913 Msa0827070:three_prime_UTR 20.0%
!! AATAGAATTATTGGATTTAG+AGG - chr5_3:68063923-68063942 Msa0827070:three_prime_UTR 20.0%
!!! AGTATAATCATGTATGATTT+TGG - chr5_3:68064062-68064081 Msa0827070:CDS 20.0%
!!! CGATCAGAATTATTATATTT+TGG - chr5_3:68064121-68064140 Msa0827070:CDS 20.0%
!!! TCAGAATTATTATATTTTGG+AGG - chr5_3:68064124-68064143 Msa0827070:CDS 20.0%
!! ACTTGTGAAATTAAGAATAT+GGG - chr5_3:68064580-68064599 Msa0827070:CDS 20.0%
!!! GATTTCATTTTTATTCCTAT+AGG - chr5_3:68064715-68064734 Msa0827070:intron 20.0%
!!! TAATGATATTTAGAATGACA+AGG - chr5_3:68064864-68064883 Msa0827070:CDS 20.0%
!!! AATATTTTTAGAGTTGGTTA+GGG + chr5_3:68065098-68065117 None:intergenic 20.0%
!!! ATTCTGAATATTTTTAGAGT+TGG + chr5_3:68065104-68065123 None:intergenic 20.0%
!!! ACACGTTATTTTTTTGAATA+AGG - chr5_3:68065405-68065424 Msa0827070:intron 20.0%
!! TTCATACCAAAGATAAAAAT+TGG + chr5_3:68065956-68065975 None:intergenic 20.0%
!! TGAATTAATAAATTCCACAA+TGG + chr5_3:68066147-68066166 None:intergenic 20.0%
!! TAGTTATTATTATCTGATTC+AGG - chr5_3:68066730-68066749 Msa0827070:intron 20.0%
!!! GATATGAATATGATAGATTT+TGG - chr5_3:68067316-68067335 Msa0827070:intron 20.0%
!! TCAAACAATTATATTACCTA+GGG + chr5_3:68067585-68067604 None:intergenic 20.0%
!! TTCAAACAATTATATTACCT+AGG + chr5_3:68067586-68067605 None:intergenic 20.0%
!! GGTAATATAATTGTTTGAAA+TGG - chr5_3:68067587-68067606 Msa0827070:five_prime_UTR 20.0%
!! ATATATTTGTGGGAATAAAT+AGG - chr5_3:68067700-68067719 Msa0827070:five_prime_UTR 20.0%
! AATCCAATAATTCTATTCCA+TGG + chr5_3:68063920-68063939 None:intergenic 25.0%
! AATTTGCGAAGTTAATAGAT+AGG - chr5_3:68064397-68064416 Msa0827070:CDS 25.0%
! AATAAGTTACTCCAAAGATT+GGG - chr5_3:68064490-68064509 Msa0827070:intron 25.0%
! GACTTGTGAAATTAAGAATA+TGG - chr5_3:68064579-68064598 Msa0827070:CDS 25.0%
!! CAAGATTCAATGCTATATTT+TGG + chr5_3:68064651-68064670 None:intergenic 25.0%
!!! ATATTTTTAGAGTTGGTTAG+GGG + chr5_3:68065097-68065116 None:intergenic 25.0%
!!! GAATATTTTTAGAGTTGGTT+AGG + chr5_3:68065099-68065118 None:intergenic 25.0%
! TAACTTACAAGTATACTGAT+AGG + chr5_3:68065297-68065316 None:intergenic 25.0%
! GTATTTGTAAGAACAGATTT+AGG + chr5_3:68065343-68065362 None:intergenic 25.0%
! ATAACCAACTAAGTATCTAT+TGG - chr5_3:68065380-68065399 Msa0827070:intron 25.0%
! TCAAAAACATAAAATGCCAA+TGG + chr5_3:68065546-68065565 None:intergenic 25.0%
!!! TGTTTTTGATGAACTTATTG+AGG - chr5_3:68065557-68065576 Msa0827070:intron 25.0%
!!! CAATAGAAGAAACTTTTTCT+TGG - chr5_3:68065689-68065708 Msa0827070:CDS 25.0%
!! ACTTGTTAAGAAATCAAAAG+AGG + chr5_3:68065783-68065802 None:intergenic 25.0%
! TTTAAGTGAAAAGATTGCTT+TGG - chr5_3:68065826-68065845 Msa0827070:intron 25.0%
! TTAAGTGAAAAGATTGCTTT+GGG - chr5_3:68065827-68065846 Msa0827070:intron 25.0%
!! AGTCATCCAATTTTTATCTT+TGG - chr5_3:68065947-68065966 Msa0827070:intron 25.0%
!! ATTGTTGTCTTCAGAATTTT+GGG - chr5_3:68066507-68066526 Msa0827070:intron 25.0%
!! TCCATTTCTCATTTTATGTT+CGG - chr5_3:68066532-68066551 Msa0827070:intron 25.0%
! GTTGAATTTGAAGATTGATA+TGG - chr5_3:68067412-68067431 Msa0827070:CDS 25.0%
! ACTTACTGTTAGAAATAAAC+TGG - chr5_3:68067534-68067553 Msa0827070:CDS 25.0%
! CTTACTGTTAGAAATAAACT+GGG - chr5_3:68067535-68067554 Msa0827070:CDS 25.0%
!! TTTTCTTTTTGACAATTCTG+AGG - chr5_3:68067636-68067655 Msa0827070:five_prime_UTR 25.0%
! TTTGTGTCTGTATATATTTG+TGG - chr5_3:68067689-68067708 Msa0827070:five_prime_UTR 25.0%
! TTGTGTCTGTATATATTTGT+GGG - chr5_3:68067690-68067709 Msa0827070:five_prime_UTR 25.0%
! AATCAAACAAAGTAAAACAC+CGG + chr5_3:68067789-68067808 None:intergenic 25.0%
!!! CAAATTGGCCTTTAGTTTTA+GGG + chr5_3:68063398-68063417 None:intergenic 30.0%
!! ATAATAAAATGGTGGGTGAT+GGG + chr5_3:68063446-68063465 None:intergenic 30.0%
!! AATAATAAAATGGTGGGTGA+TGG + chr5_3:68063447-68063466 None:intergenic 30.0%
CAATCAGAAAATAACAGTGA+TGG + chr5_3:68063565-68063584 None:intergenic 30.0%
AATCGTTGTAATCTTTGCTT+GGG - chr5_3:68063749-68063768 Msa0827070:three_prime_UTR 30.0%
!! TTTAGAGGTTGATAGATTGA+TGG - chr5_3:68063938-68063957 Msa0827070:three_prime_UTR 30.0%
!! TTAGAGGTTGATAGATTGAT+GGG - chr5_3:68063939-68063958 Msa0827070:three_prime_UTR 30.0%
! ATGTTGTGTACTTAGTTCTT+TGG - chr5_3:68064093-68064112 Msa0827070:CDS 30.0%
!! TCCTTCTAGTTAAGTGTTTT+TGG - chr5_3:68064156-68064175 Msa0827070:CDS 30.0%
!! CCTTCTAGTTAAGTGTTTTT+GGG - chr5_3:68064157-68064176 Msa0827070:CDS 30.0%
TATAACCATTCCAAATGGTT+AGG + chr5_3:68064241-68064260 None:intergenic 30.0%
TATAGCAACAAAAACTACCT+TGG - chr5_3:68064257-68064276 Msa0827070:CDS 30.0%
AGACAACTAATGCTAAGAAA+AGG + chr5_3:68064349-68064368 None:intergenic 30.0%
! TTTTCTTAGCATTAGTTGTC+TGG - chr5_3:68064348-68064367 Msa0827070:CDS 30.0%
AGAAAGTAGAAACTATATGC+TGG - chr5_3:68064424-68064443 Msa0827070:CDS 30.0%
CTTATTCTACTCTCAACAAA+TGG + chr5_3:68064476-68064495 None:intergenic 30.0%
GAATAAGTTACTCCAAAGAT+TGG - chr5_3:68064489-68064508 Msa0827070:intron 30.0%
GTGAAATTAAGAATATGGGT+AGG - chr5_3:68064584-68064603 Msa0827070:CDS 30.0%
AATTAAGAATATGGGTAGGT+TGG - chr5_3:68064588-68064607 Msa0827070:CDS 30.0%
TGTTTAGTTGCTTCAATTTC+TGG - chr5_3:68064767-68064786 Msa0827070:intron 30.0%
ATATACTAATATGCTGTTGC+GGG + chr5_3:68064914-68064933 None:intergenic 30.0%
CATATACTAATATGCTGTTG+CGG + chr5_3:68064915-68064934 None:intergenic 30.0%
!!! TCCTTTTTTATTTTCCACCA+CGG + chr5_3:68065008-68065027 None:intergenic 30.0%
TGGTGGAAAATAAAAAAGGA+AGG - chr5_3:68065008-68065027 Msa0827070:CDS 30.0%
GGTGGAAAATAAAAAAGGAA+GGG - chr5_3:68065009-68065028 Msa0827070:CDS 30.0%
CTTGTAAGTTATATGTAGCT+TGG - chr5_3:68065306-68065325 Msa0827070:intron 30.0%
GTAACCAATAGATACTTAGT+TGG + chr5_3:68065387-68065406 None:intergenic 30.0%
AGGTGAGCACAAATTTAATA+CGG + chr5_3:68065437-68065456 None:intergenic 30.0%
! CTGAAATAATTTGTACAGAC+AGG + chr5_3:68065919-68065938 None:intergenic 30.0%
CTGTCTGTACAAATTATTTC+AGG - chr5_3:68065917-68065936 Msa0827070:intron 30.0%
! TTGAAGTTGTGTATGTCTTT+TGG - chr5_3:68065985-68066004 Msa0827070:intron 30.0%
! TGAAGTTGTGTATGTCTTTT+GGG - chr5_3:68065986-68066005 Msa0827070:intron 30.0%
GTATGGAAAGCAATTATAGT+AGG + chr5_3:68066021-68066040 None:intergenic 30.0%
TCTGGACATATATATGATTC+TGG - chr5_3:68066212-68066231 Msa0827070:intron 30.0%
AAATCACTTGTAACATCTAG+TGG + chr5_3:68066239-68066258 None:intergenic 30.0%
! CTAGATGTTACAAGTGATTT+TGG - chr5_3:68066239-68066258 Msa0827070:intron 30.0%
CTGAAGACAACAATGAAATT+AGG + chr5_3:68066501-68066520 None:intergenic 30.0%
! CATTGTTGTCTTCAGAATTT+TGG - chr5_3:68066506-68066525 Msa0827070:intron 30.0%
! TTGTTGTCTTCAGAATTTTG+GGG - chr5_3:68066508-68066527 Msa0827070:intron 30.0%
TCCGAACATAAAATGAGAAA+TGG + chr5_3:68066536-68066555 None:intergenic 30.0%
ACCCATGTTAAATTATGTTC+TGG - chr5_3:68066674-68066693 Msa0827070:intron 30.0%
GCCAGAACATAATTTAACAT+GGG + chr5_3:68066678-68066697 None:intergenic 30.0%
TGCCAGAACATAATTTAACA+TGG + chr5_3:68066679-68066698 None:intergenic 30.0%
AATTAATTGCAACTTTCTGC+AGG + chr5_3:68066906-68066925 None:intergenic 30.0%
AACAACAATGATAGAGAATC+TGG - chr5_3:68066997-68067016 Msa0827070:intron 30.0%
ACAACAATGATAGAGAATCT+GGG - chr5_3:68066998-68067017 Msa0827070:intron 30.0%
! ATGTGAAATTTTGTGGGAAT+CGG - chr5_3:68067148-68067167 Msa0827070:intron 30.0%
ATGCGTTTAATTCCTCTAAA+AGG + chr5_3:68067195-68067214 None:intergenic 30.0%
TTTAGAGGAATTAAACGCAT+TGG - chr5_3:68067195-68067214 Msa0827070:intron 30.0%
TGATCACCTGTTTATATCTA+CGG + chr5_3:68067472-68067491 None:intergenic 30.0%
ATAATTGTTGTCACTCAGAA+AGG - chr5_3:68067498-68067517 Msa0827070:CDS 30.0%
TAATTGTTGTCACTCAGAAA+GGG - chr5_3:68067499-68067518 Msa0827070:CDS 30.0%
AAATGGAAAAAGATGAACTG+AGG - chr5_3:68067604-68067623 Msa0827070:five_prime_UTR 30.0%
!!! CAATTTTTTAGCCTCAAACA+TGG + chr5_3:68067726-68067745 None:intergenic 30.0%
GTAAGAAAAGCAGAATATTC+CGG - chr5_3:68067767-68067786 Msa0827070:five_prime_UTR 30.0%
ACACGAATCCCTAAAACTAA+AGG - chr5_3:68063387-68063406 Msa0827070:three_prime_UTR 35.0%
!!! CCAAATTGGCCTTTAGTTTT+AGG + chr5_3:68063399-68063418 None:intergenic 35.0%
CCTAAAACTAAAGGCCAATT+TGG - chr5_3:68063396-68063415 Msa0827070:three_prime_UTR 35.0%
TAGACACTGGATATCCAAAT+TGG + chr5_3:68063413-68063432 None:intergenic 35.0%
!! TAACAGTGATGGCTTTGAAT+CGG + chr5_3:68063554-68063573 None:intergenic 35.0%
!! AAACACGACACTGATTTCAA+AGG - chr5_3:68063726-68063745 Msa0827070:three_prime_UTR 35.0%
GAATCGTTGTAATCTTTGCT+TGG - chr5_3:68063748-68063767 Msa0827070:three_prime_UTR 35.0%
! AATTCCTGTAACAGGTTTTG+TGG + chr5_3:68063783-68063802 None:intergenic 35.0%
AAGAGAATTCCAACCTAAAG+AGG + chr5_3:68063820-68063839 None:intergenic 35.0%
CTAGAAAAGAGAAACTTACG+CGG + chr5_3:68063865-68063884 None:intergenic 35.0%
!! TTTTTCAATTTCGTTGGCCA+TGG - chr5_3:68063900-68063919 Msa0827070:three_prime_UTR 35.0%
TGGCCATGGAATAGAATTAT+TGG - chr5_3:68063914-68063933 Msa0827070:three_prime_UTR 35.0%
CCCAAAAACACTTAACTAGA+AGG + chr5_3:68064160-68064179 None:intergenic 35.0%
GTTATGTTTGCCTAACCATT+TGG - chr5_3:68064228-68064247 Msa0827070:CDS 35.0%
GTTGCTATAACCATTCCAAA+TGG + chr5_3:68064246-68064265 None:intergenic 35.0%
TCAAACATTTGATCGTATGC+TGG - chr5_3:68064321-68064340 Msa0827070:CDS 35.0%
TTGCGAAGTTAATAGATAGG+TGG - chr5_3:68064400-68064419 Msa0827070:CDS 35.0%
CTAGTCTCTTACATTCCTAT+AGG + chr5_3:68064733-68064752 None:intergenic 35.0%
! ACCGTGGTGGAAAATAAAAA+AGG - chr5_3:68065004-68065023 Msa0827070:CDS 35.0%
!! GGGAATATTTTCTCTGGTTT+AGG + chr5_3:68065077-68065096 None:intergenic 35.0%
AAGTATACTGATAGGACACT+TGG + chr5_3:68065289-68065308 None:intergenic 35.0%
TGAGCACAAATTTAATACGG+TGG + chr5_3:68065434-68065453 None:intergenic 35.0%
! TCACAATTTTCTCTTCATCC+AGG - chr5_3:68065499-68065518 Msa0827070:intron 35.0%
ACCTATGACTATGACACTTA+GGG + chr5_3:68065807-68065826 None:intergenic 35.0%
AACCTATGACTATGACACTT+AGG + chr5_3:68065808-68065827 None:intergenic 35.0%
GAAAAAGAAGCAAACACAAC+AGG + chr5_3:68065882-68065901 None:intergenic 35.0%
! TGTTTGCTTCTTTTTCTGCT+GGG - chr5_3:68065886-68065905 Msa0827070:intron 35.0%
! GAAGTTGTGTATGTCTTTTG+GGG - chr5_3:68065987-68066006 Msa0827070:intron 35.0%
TTCACTAAGCTGCATTTGTA+TGG + chr5_3:68066038-68066057 None:intergenic 35.0%
ATACAAATGCAGCTTAGTGA+AGG - chr5_3:68066037-68066056 Msa0827070:intron 35.0%
! AATTGCATTACCAAGTTGAG+TGG + chr5_3:68066076-68066095 None:intergenic 35.0%
ATCAATCAAAGTAGAAAGCG+AGG + chr5_3:68066105-68066124 None:intergenic 35.0%
GCTTTCTACTTTGATTGATG+TGG - chr5_3:68066106-68066125 Msa0827070:intron 35.0%
AGCATGACTGTCAATTGTTT+AGG - chr5_3:68066180-68066199 Msa0827070:intron 35.0%
TTGTTTAGGAACTGTGTTTC+TGG - chr5_3:68066194-68066213 Msa0827070:intron 35.0%
! ACCATCAAAGCTTGTTTCTT+GGG - chr5_3:68066304-68066323 Msa0827070:intron 35.0%
AATCTCAATCAGCTGATCAT+TGG - chr5_3:68066378-68066397 Msa0827070:intron 35.0%
AGTAATCTATCTTGACCATC+TGG - chr5_3:68066425-68066444 Msa0827070:intron 35.0%
GAATGTTTAGTGGCATGTTT+CGG - chr5_3:68066447-68066466 Msa0827070:intron 35.0%
! TTTTCGTGAATACGTTGACA+CGG + chr5_3:68066815-68066834 None:intergenic 35.0%
ATACTTGAACGAGAAAGAAC+TGG - chr5_3:68066838-68066857 Msa0827070:intron 35.0%
!!! AGTTTTAGAAGAGTTGCAGT+GGG - chr5_3:68066934-68066953 Msa0827070:intron 35.0%
TGTGTTCCAAAGAATGTTGA+AGG - chr5_3:68067117-68067136 Msa0827070:intron 35.0%
TTCCAAAGAATGTTGAAGGT+TGG - chr5_3:68067121-68067140 Msa0827070:intron 35.0%
TCCAAAGAATGTTGAAGGTT+GGG - chr5_3:68067122-68067141 Msa0827070:intron 35.0%
! TGGGATGATGTGAAATTTTG+TGG - chr5_3:68067141-68067160 Msa0827070:intron 35.0%
! GGGATGATGTGAAATTTTGT+GGG - chr5_3:68067142-68067161 Msa0827070:intron 35.0%
! AAATTTTGTGGGAATCGGAA+TGG - chr5_3:68067153-68067172 Msa0827070:intron 35.0%
! AATTTTGTGGGAATCGGAAT+GGG - chr5_3:68067154-68067173 Msa0827070:intron 35.0%
! TCCTGAATTTTACGAGACAA+AGG - chr5_3:68067291-68067310 Msa0827070:intron 35.0%
TCCTTTGTCTCGTAAAATTC+AGG + chr5_3:68067295-68067314 None:intergenic 35.0%
! TGAATTTTACGAGACAAAGG+AGG - chr5_3:68067294-68067313 Msa0827070:intron 35.0%
!! ATAGATTTTGGTGCAACAGT+GGG - chr5_3:68067328-68067347 Msa0827070:intron 35.0%
TGATTGCCGTAGATATAAAC+AGG - chr5_3:68067463-68067482 Msa0827070:CDS 35.0%
AATTGTTGTCACTCAGAAAG+GGG - chr5_3:68067500-68067519 Msa0827070:CDS 35.0%
!!! TTTTTGACAATTCTGAGGTG+AGG - chr5_3:68067641-68067660 Msa0827070:five_prime_UTR 35.0%
GAATAAATAGGCCATGTTTG+AGG - chr5_3:68067712-68067731 Msa0827070:five_prime_UTR 35.0%
!! GAGTTTGACAGAAGTTGATA+TGG - chr5_3:68067818-68067837 Msa0827070:five_prime_UTR 35.0%
AATTCACGTGTTTCGCTTAC+TGG - chr5_3:68063629-68063648 Msa0827070:three_prime_UTR 40.0%
ATTCACGTGTTTCGCTTACT+GGG - chr5_3:68063630-68063649 Msa0827070:three_prime_UTR 40.0%
AGTTCCACAAAACCTGTTAC+AGG - chr5_3:68063776-68063795 Msa0827070:three_prime_UTR 40.0%
GTTGACCTTTACTCCTCTTT+AGG - chr5_3:68063804-68063823 Msa0827070:three_prime_UTR 40.0%
ACCTTTACTCCTCTTTAGGT+TGG - chr5_3:68063808-68063827 Msa0827070:three_prime_UTR 40.0%
TCCAACCTAAAGAGGAGTAA+AGG + chr5_3:68063812-68063831 None:intergenic 40.0%
!! GGTTGATAGATTGATGGGTT+TGG - chr5_3:68063944-68063963 Msa0827070:three_prime_UTR 40.0%
TTTGCCTTAAGCTTGTGAGA+GGG - chr5_3:68064186-68064205 Msa0827070:CDS 40.0%
GTTTGCCTAACCATTTGGAA+TGG - chr5_3:68064233-68064252 Msa0827070:CDS 40.0%
! AACATGCAAAGCATCATCCA+AGG + chr5_3:68064277-68064296 None:intergenic 40.0%
AAGTTACTCCAAAGATTGGG+TGG - chr5_3:68064493-68064512 Msa0827070:intron 40.0%
AGTTACTCCAAAGATTGGGT+GGG - chr5_3:68064494-68064513 Msa0827070:intron 40.0%
TTACTAACCCACCCAATCTT+TGG + chr5_3:68064504-68064523 None:intergenic 40.0%
TGAATCTTGTAAGACAGCCA+TGG - chr5_3:68064662-68064681 Msa0827070:CDS 40.0%
GTTAGAAGTTCTCGAAACTC+TGG + chr5_3:68065040-68065059 None:intergenic 40.0%
! GGTTAGGGGAATATTTTCTC+TGG + chr5_3:68065083-68065102 None:intergenic 40.0%
AGAGGATGAGTTAGTTAGTG+AGG + chr5_3:68065171-68065190 None:intergenic 40.0%
TACACCAAACCAATGAGTCA+AGG + chr5_3:68065457-68065476 None:intergenic 40.0%
!! GGTTTGGTGTACAATACTGA+TGG - chr5_3:68065466-68065485 Msa0827070:intron 40.0%
AAAATGCTAACAAGCACCCT+TGG - chr5_3:68065649-68065668 Msa0827070:intron 40.0%
AAATGCTAACAAGCACCCTT+GGG - chr5_3:68065650-68065669 Msa0827070:intron 40.0%
! GTGTTTGCTTCTTTTTCTGC+TGG - chr5_3:68065885-68065904 Msa0827070:intron 40.0%
! TGATGTGGTTTTCTACATCG+CGG - chr5_3:68066121-68066140 Msa0827070:intron 40.0%
! AGAAACAAGCTTTGATGGTC+CGG + chr5_3:68066303-68066322 None:intergenic 40.0%
! GACCATCAAAGCTTGTTTCT+TGG - chr5_3:68066303-68066322 Msa0827070:intron 40.0%
! ACCCAAGAAACAAGCTTTGA+TGG + chr5_3:68066308-68066327 None:intergenic 40.0%
AAAGTCTGTTGCATCTGGTT+TGG - chr5_3:68066331-68066350 Msa0827070:intron 40.0%
! TGACCATCTGGAATGTTTAG+TGG - chr5_3:68066437-68066456 Msa0827070:intron 40.0%
ATGCCACTAAACATTCCAGA+TGG + chr5_3:68066443-68066462 None:intergenic 40.0%
TGTGAGCCATTTATTGGAGA+AGG - chr5_3:68066789-68066808 Msa0827070:intron 40.0%
! CGAGAAAGAACTGGTATTGA+TGG - chr5_3:68066847-68066866 Msa0827070:intron 40.0%
!!! GAGTTTTAGAAGAGTTGCAG+TGG - chr5_3:68066933-68066952 Msa0827070:intron 40.0%
CTGAACTAGGCAAAAAGAAG+TGG + chr5_3:68066969-68066988 None:intergenic 40.0%
! TTCTTTTTGCCTAGTTCAGC+AGG - chr5_3:68066970-68066989 Msa0827070:intron 40.0%
TTGTTATGTCCTGCTGAACT+AGG + chr5_3:68066982-68067001 None:intergenic 40.0%
! ATAGAGAATCTGGGATTCCA+CGG - chr5_3:68067007-68067026 Msa0827070:intron 40.0%
CGTCAAAAAGAAATTGCCCA+AGG + chr5_3:68067095-68067114 None:intergenic 40.0%
TCCCAACCTTCAACATTCTT+TGG + chr5_3:68067126-68067145 None:intergenic 40.0%
!! GATAGATTTTGGTGCAACAG+TGG - chr5_3:68067327-68067346 Msa0827070:intron 40.0%
GGTTGCGATGATTCAACTAT+CGG - chr5_3:68067382-68067401 Msa0827070:CDS 40.0%
GTTGCGATGATTCAACTATC+GGG - chr5_3:68067383-68067402 Msa0827070:CDS 40.0%
AACTGGGTGATGTTTGACTA+AGG - chr5_3:68067551-68067570 Msa0827070:exon 40.0%
!! ACAGAAGTTGATATGGCGTA+TGG - chr5_3:68067825-68067844 Msa0827070:five_prime_UTR 40.0%
TCTCATATCATCGCTATGCG+TGG - chr5_3:68063657-68063676 Msa0827070:three_prime_UTR 45.0%
GGTCAACGAATTCCTGTAAC+AGG + chr5_3:68063791-68063810 None:intergenic 45.0%
!! GATGGGTTTGGTGTTACTTG+TGG - chr5_3:68063956-68063975 Msa0827070:three_prime_UTR 45.0%
!! GGTTTGGTGTTACTTGTGGA+TGG - chr5_3:68063960-68063979 Msa0827070:three_prime_UTR 45.0%
CTTTGCCTTAAGCTTGTGAG+AGG - chr5_3:68064185-68064204 Msa0827070:CDS 45.0%
TTGCCTTAAGCTTGTGAGAG+GGG - chr5_3:68064187-68064206 Msa0827070:CDS 45.0%
! AACTATATGCTGGTCTGCTC+TGG - chr5_3:68064434-68064453 Msa0827070:CDS 45.0%
! AGAATATGGGTAGGTTGGAG+AGG - chr5_3:68064593-68064612 Msa0827070:CDS 45.0%
AAGTGTTCCAGCTGAATCCA+TGG + chr5_3:68064682-68064701 None:intergenic 45.0%
!! GGTTTAGGAGCATTTAGCTC+TGG + chr5_3:68065062-68065081 None:intergenic 45.0%
TGTGCACCAATCTCATGTGA+GGG + chr5_3:68065148-68065167 None:intergenic 45.0%
TGCACGAAGGGAAAAAAGGT+GGG + chr5_3:68065203-68065222 None:intergenic 45.0%
TTGCACGAAGGGAAAAAAGG+TGG + chr5_3:68065204-68065223 None:intergenic 45.0%
GGTTTGCACGAAGGGAAAAA+AGG + chr5_3:68065207-68065226 None:intergenic 45.0%
! TTCTGGAAGGTTTGCACGAA+GGG + chr5_3:68065215-68065234 None:intergenic 45.0%
TTGTGCTCACCTTGACTCAT+TGG - chr5_3:68065445-68065464 Msa0827070:intron 45.0%
! CTCACCTTGACTCATTGGTT+TGG - chr5_3:68065450-68065469 Msa0827070:intron 45.0%
CTCTTCATCCAGGTTCAATG+AGG - chr5_3:68065509-68065528 Msa0827070:intron 45.0%
CAGGTTCAATGAGGAAAGTG+CGG - chr5_3:68065518-68065537 Msa0827070:intron 45.0%
AATGCTAACAAGCACCCTTG+GGG - chr5_3:68065651-68065670 Msa0827070:intron 45.0%
CTTCTAAACAAGTGCCCCAA+GGG + chr5_3:68065668-68065687 None:intergenic 45.0%
ACTTCTAAACAAGTGCCCCA+AGG + chr5_3:68065669-68065688 None:intergenic 45.0%
GCCCTAAGTGTCATAGTCAT+AGG - chr5_3:68065803-68065822 Msa0827070:intron 45.0%
! AAGATTGCTTTGGGTTACGC+AGG - chr5_3:68065836-68065855 Msa0827070:intron 45.0%
GAAGCAAACACAACAGGACA+TGG + chr5_3:68065876-68065895 None:intergenic 45.0%
! TGGAAGGGTGTAGAGAAAAG+CGG + chr5_3:68066268-68066287 None:intergenic 45.0%
! GAAACAAGCTTTGATGGTCC+GGG + chr5_3:68066302-68066321 None:intergenic 45.0%
GTAGCAAAGTCTGTTGCATC+TGG - chr5_3:68066326-68066345 Msa0827070:intron 45.0%
TCAATCAGCTGATCATTGGC+AGG - chr5_3:68066382-68066401 Msa0827070:intron 45.0%
ACAGCAGCTCTGTATTGGAT+TGG + chr5_3:68066772-68066791 None:intergenic 45.0%
AGCTGCTGTGAGCCATTTAT+TGG - chr5_3:68066783-68066802 Msa0827070:intron 45.0%
ACACGGCCTTCTCCAATAAA+TGG + chr5_3:68066798-68066817 None:intergenic 45.0%
GGCAAAAAGAAGTGGTCACT+TGG + chr5_3:68066961-68066980 None:intergenic 45.0%
! TAGAGAATCTGGGATTCCAC+GGG - chr5_3:68067008-68067027 Msa0827070:intron 45.0%
! TCACGTGTGTCACCTTTTAG+AGG - chr5_3:68067180-68067199 Msa0827070:intron 45.0%
! TTAAACGCATTGGTCGCTCT+AGG - chr5_3:68067205-68067224 Msa0827070:intron 45.0%
CACTGCCAGATACGATACAA+CGG + chr5_3:68067358-68067377 None:intergenic 45.0%
TATCGTATCTGGCAGTGCAA+TGG - chr5_3:68067361-68067380 Msa0827070:intron 45.0%
GACTAAGGTAACTACTCCCT+AGG - chr5_3:68067566-68067585 Msa0827070:five_prime_UTR 45.0%
ATCGCTATGCGTGGAGTTGA+AGG - chr5_3:68063666-68063685 Msa0827070:three_prime_UTR 50.0%
GTAGATGTTACCGCCTCGTA+CGG + chr5_3:68063697-68063716 None:intergenic 50.0%
TACGAGGCGGTAACATCTAC+TGG - chr5_3:68063697-68063716 Msa0827070:three_prime_UTR 50.0%
ACGAGGCGGTAACATCTACT+GGG - chr5_3:68063698-68063717 Msa0827070:three_prime_UTR 50.0%
TCTGCTCTGGCAACTTGAAC+AGG - chr5_3:68064447-68064466 Msa0827070:CDS 50.0%
CTGCTCTGGCAACTTGAACA+GGG - chr5_3:68064448-68064467 Msa0827070:CDS 50.0%
TGCTCTGGCAACTTGAACAG+GGG - chr5_3:68064449-68064468 Msa0827070:CDS 50.0%
AAGACAGCCATGGATTCAGC+TGG - chr5_3:68064672-68064691 Msa0827070:CDS 50.0%
GGATTCAGCTGGAACACTTG+TGG - chr5_3:68064683-68064702 Msa0827070:CDS 50.0%
TTCAGCTGGAACACTTGTGG+AGG - chr5_3:68064686-68064705 Msa0827070:CDS 50.0%
TCAGCTGGAACACTTGTGGA+GGG - chr5_3:68064687-68064706 Msa0827070:CDS 50.0%
CAATCTCATGTGAGGGGGTT+GGG + chr5_3:68065141-68065160 None:intergenic 50.0%
TGCACCAATCTCATGTGAGG+GGG + chr5_3:68065146-68065165 None:intergenic 50.0%
GTGCACCAATCTCATGTGAG+GGG + chr5_3:68065147-68065166 None:intergenic 50.0%
GTGTGCACCAATCTCATGTG+AGG + chr5_3:68065149-68065168 None:intergenic 50.0%
AGGGAAAAAAGGTGGGGCAA+GGG + chr5_3:68065196-68065215 None:intergenic 50.0%
AAGGGAAAAAAGGTGGGGCA+AGG + chr5_3:68065197-68065216 None:intergenic 50.0%
GCACGAAGGGAAAAAAGGTG+GGG + chr5_3:68065202-68065221 None:intergenic 50.0%
! CTTCTGGAAGGTTTGCACGA+AGG + chr5_3:68065216-68065235 None:intergenic 50.0%
AAACCTTCCAGAAGCTGGCT+CGG - chr5_3:68065222-68065241 Msa0827070:intron 50.0%
CCATGGTGAGCTAAGCAATG+GGG + chr5_3:68065257-68065276 None:intergenic 50.0%
CCCATGGTGAGCTAAGCAAT+GGG + chr5_3:68065258-68065277 None:intergenic 50.0%
CCCATTGCTTAGCTCACCAT+GGG - chr5_3:68065255-68065274 Msa0827070:intron 50.0%
! CTTAGCTCACCATGGGCTAT+AGG - chr5_3:68065262-68065281 Msa0827070:intron 50.0%
ACACTTGGACCTATAGCCCA+TGG + chr5_3:68065274-68065293 None:intergenic 50.0%
CGCACTTTCCTCATTGAACC+TGG + chr5_3:68065520-68065539 None:intergenic 50.0%
! TTTGGGTTACGCAGGTGCTA+AGG - chr5_3:68065844-68065863 Msa0827070:intron 50.0%
TTACGCAGGTGCTAAGGACT+AGG - chr5_3:68065850-68065869 Msa0827070:intron 50.0%
ATGCACAGCTCCACTCAACT+TGG - chr5_3:68066063-68066082 Msa0827070:intron 50.0%
TTTCTACATCGCGGCCATTG+TGG - chr5_3:68066130-68066149 Msa0827070:intron 50.0%
! CGGGCACTTTTGCAATGGAA+GGG + chr5_3:68066283-68066302 None:intergenic 50.0%
!! CCTTCCATTGCAAAAGTGCC+CGG - chr5_3:68066281-68066300 Msa0827070:intron 50.0%
CTGAGAAGCTCATCTCACGT+TGG - chr5_3:68066641-68066660 Msa0827070:intron 50.0%
TCTTCTTTCTGTTCGTCCCG+TGG + chr5_3:68067027-68067046 None:intergenic 50.0%
! TGGGAAGCTAGGAGCACAAA+CGG + chr5_3:68067052-68067071 None:intergenic 50.0%
TTTGTGGGAATCGGAATGGG+AGG - chr5_3:68067157-68067176 Msa0827070:intron 50.0%
!! ATTTTGGTGCAACAGTGGGC+CGG - chr5_3:68067332-68067351 Msa0827070:intron 50.0%
TTGTCACTCAGAAAGGGGAG+TGG - chr5_3:68067505-68067524 Msa0827070:CDS 50.0%
GGGTGATGCTGAGTAGACAC+TGG + chr5_3:68063426-68063445 None:intergenic 55.0%
GTTGAAGGTTGTGCCGTACG+AGG - chr5_3:68063681-68063700 Msa0827070:three_prime_UTR 55.0%
CGAGGCGGTAACATCTACTG+GGG - chr5_3:68063699-68063718 Msa0827070:three_prime_UTR 55.0%
GCTCCCCTCTCACAAGCTTA+AGG + chr5_3:68064193-68064212 None:intergenic 55.0%
TGAGCTCAAGAGCTCTACCG+TGG - chr5_3:68064988-68065007 Msa0827070:CDS 55.0%
!! AGGGGGTTGGGTAGTGGAAA+GGG + chr5_3:68065129-68065148 None:intergenic 55.0%
CCAATCTCATGTGAGGGGGT+TGG + chr5_3:68065142-68065161 None:intergenic 55.0%
CCAACCCCCTCACATGAGAT+TGG - chr5_3:68065139-68065158 Msa0827070:intron 55.0%
GGAAAAAAGGTGGGGCAAGG+GGG + chr5_3:68065194-68065213 None:intergenic 55.0%
GGGAAAAAAGGTGGGGCAAG+GGG + chr5_3:68065195-68065214 None:intergenic 55.0%
CGTGCAAACCTTCCAGAAGC+TGG - chr5_3:68065217-68065236 Msa0827070:intron 55.0%
! AACCTTCCAGAAGCTGGCTC+GGG - chr5_3:68065223-68065242 Msa0827070:intron 55.0%
CCCCATTGCTTAGCTCACCA+TGG - chr5_3:68065254-68065273 Msa0827070:intron 55.0%
GCCCATGGTGAGCTAAGCAA+TGG + chr5_3:68065259-68065278 None:intergenic 55.0%
!! TGAGGAAAGTGCGGTGCCAT+TGG - chr5_3:68065527-68065546 Msa0827070:intron 55.0%
! CCGGGCACTTTTGCAATGGA+AGG + chr5_3:68066284-68066303 None:intergenic 55.0%
! TGGTCCGGGCACTTTTGCAA+TGG + chr5_3:68066288-68066307 None:intergenic 55.0%
GGCTCACAGCAGCTCTGTAT+TGG + chr5_3:68066777-68066796 None:intergenic 55.0%
! GGGAAGCTAGGAGCACAAAC+GGG + chr5_3:68067051-68067070 None:intergenic 55.0%
GCCAGATACGATACAACGGC+CGG + chr5_3:68067354-68067373 None:intergenic 55.0%
GAAGGTTGTGCCGTACGAGG+CGG - chr5_3:68063684-68063703 Msa0827070:three_prime_UTR 60.0%
GCTCAAGAGCTCTACCGTGG+TGG - chr5_3:68064991-68065010 Msa0827070:CDS 60.0%
!! GGGGGTTGGGTAGTGGAAAG+GGG + chr5_3:68065128-68065147 None:intergenic 60.0%
!! GAGGGGGTTGGGTAGTGGAA+AGG + chr5_3:68065130-68065149 None:intergenic 60.0%
CATGTGAGGGGGTTGGGTAG+TGG + chr5_3:68065135-68065154 None:intergenic 60.0%
! GCGCTGATGCTTGGGAAGCT+AGG + chr5_3:68067063-68067082 None:intergenic 60.0%
!! CGCTGTGAGCGCTGATGCTT+GGG + chr5_3:68067071-68067090 None:intergenic 60.0%
!! ACGCTGTGAGCGCTGATGCT+TGG + chr5_3:68067072-68067091 None:intergenic 60.0%
ATCAGCGCTCACAGCGTCCT+TGG - chr5_3:68067075-68067094 Msa0827070:intron 60.0%
TCAGCGCTCACAGCGTCCTT+GGG - chr5_3:68067076-68067095 Msa0827070:intron 60.0%
GCCGGCCGTTGTATCGTATC+TGG - chr5_3:68067350-68067369 Msa0827070:intron 60.0%
AAAGGTGGGGCAAGGGGGAG+AGG + chr5_3:68065189-68065208 None:intergenic 65.0%
AGCCCGAGCCAGCTTCTGGA+AGG + chr5_3:68065228-68065247 None:intergenic 65.0%
!! TTCCAGAAGCTGGCTCGGGC+TGG - chr5_3:68065227-68065246 Msa0827070:intron 65.0%
AACCAGCCCGAGCCAGCTTC+TGG + chr5_3:68065232-68065251 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 68063380 68067850 68063380 ID=Msa0827070;Name=Msa0827070
chr5_3 mRNA 68063380 68067850 68063380 ID=Msa0827070-mRNA-1;Parent=Msa0827070;Name=Msa0827070-mRNA-1;_AED=0.21;_eAED=0.21;_QI=292|0.8|1|1|1|1|6|617|383
chr5_3 exon 68063380 68064478 68063380 ID=Msa0827070-mRNA-1:exon:21333;Parent=Msa0827070-mRNA-1
chr5_3 exon 68064568 68064709 68064568 ID=Msa0827070-mRNA-1:exon:21332;Parent=Msa0827070-mRNA-1
chr5_3 exon 68064809 68065048 68064809 ID=Msa0827070-mRNA-1:exon:21331;Parent=Msa0827070-mRNA-1
chr5_3 exon 68065146 68065181 68065146 ID=Msa0827070-mRNA-1:exon:21330;Parent=Msa0827070-mRNA-1
chr5_3 exon 68065652 68065709 68065652 ID=Msa0827070-mRNA-1:exon:21329;Parent=Msa0827070-mRNA-1
chr5_3 exon 68067365 68067850 68067365 ID=Msa0827070-mRNA-1:exon:21328;Parent=Msa0827070-mRNA-1
chr5_3 five_prime_UTR 68067559 68067850 68067559 ID=Msa0827070-mRNA-1:five_prime_utr;Parent=Msa0827070-mRNA-1
chr5_3 CDS 68067365 68067558 68067365 ID=Msa0827070-mRNA-1:cds;Parent=Msa0827070-mRNA-1
chr5_3 CDS 68065652 68065709 68065652 ID=Msa0827070-mRNA-1:cds;Parent=Msa0827070-mRNA-1
chr5_3 CDS 68065146 68065181 68065146 ID=Msa0827070-mRNA-1:cds;Parent=Msa0827070-mRNA-1
chr5_3 CDS 68064809 68065048 68064809 ID=Msa0827070-mRNA-1:cds;Parent=Msa0827070-mRNA-1
chr5_3 CDS 68064568 68064709 68064568 ID=Msa0827070-mRNA-1:cds;Parent=Msa0827070-mRNA-1
chr5_3 CDS 68063997 68064478 68063997 ID=Msa0827070-mRNA-1:cds;Parent=Msa0827070-mRNA-1
chr5_3 three_prime_UTR 68063380 68063996 68063380 ID=Msa0827070-mRNA-1:three_prime_utr;Parent=Msa0827070-mRNA-1
Gene Sequence

>Msa0827070

ATGCGTGGAGTTGAAGGTTGTGCCGTACGAGGCGGTAACATCTACTGGGGAAGAAAACACGACACTGATTTCAAAGGAATCGTTGTAATCTTTGCTTGGGTTTCAGTTCCACAAAACCTGTTACAGGAATTCGTTGACCTTTACTCCTCTTTAGGTTGGAATTCTCTTGTTTGTTATGCTCATTATCTATCCGCGTTCAATGAGGAAAGTGCGGTGCCATTGGCATTTTATGTTTTTGATGAACTTATTGAGCTTAGTGAAGGAAGATGCACAGCTCCACTCAACTTGCATGACTGTCAATTGTTTAGGAACTGTGTTTCTGGACATATATATGATTCTGGTCCACTAGATGTTACAAGTGATTTTGGCTTCCGCTTTTCTCTACACCCTTCCATTGCAAAAGTGCCCGGACCATCAAAGCTTGTTTCTTGGGTAGCAAAGTCTGTTGCATCTGGTTTGGATGCTTTATACTTGACTAGATTTGAATCTCAATCAGCTGATCATTGGCAGGCTTTATATTCTTCTGTTAATTTTGGGGCTCCATTTCTCATTTTATGTTCGGAGAATGATGAACTTGTGAGATATCAAAGTATCTATGATTTTGCTCAACGATTACGCAATCTCAACGCTGATGTCAATCTTGTAAATCTGAGAAGCTCATCTCACGTTGGTCATTATGAACATCATCCAATCCAATACAGAGCTGCTGTGAGCCATTTATTGGAGAAGGCCGTGTCAACGTATTCACGAAAAGTTATACTTGAACGAGAAAGAACTGGTATTGATGGTACGCACGACGAGATATCTGAGTTAATCTGTGACCTGCAGAAAGTTGCAATTAATTCAAATGAGAGTTTTAGAAGAGTTGCAGTGGGACCAAGTGACCACTTCTTTTTGCCTAGTTCAGCAGGACATAACAACAATGATAGAGAATCTGGGATTCCACGGGACGAACAGAAAGAAGAACCCGTTTGTGCTCCTAGCTTCCCAAGCATCAGCGCTCACAGCGTCCTTGGGCAATTTCTTTTTGACGTTTGTGTTCCAAAGAATGTTGAAGGTTGGGATGATGTGAAATTTTGTGGGAATCGGAATGGGAGGTCACGTGTGTCACCTTTTAGAGGAATTAAACGCATTGGTCGCTCTAGGTTATGA
Protein sequence

>Msa0827070

MRGVEGCAVRGGNIYWGRKHDTDFKGIVVIFAWVSVPQNLLQEFVDLYSSLGWNSLVCYAHYLSAFNEESAVPLAFYVFDELIELSEGRCTAPLNLHDCQLFRNCVSGHIYDSGPLDVTSDFGFRFSLHPSIAKVPGPSKLVSWVAKSVASGLDALYLTRFESQSADHWQALYSSVNFGAPFLILCSENDELVRYQSIYDFAQRLRNLNADVNLVNLRSSSHVGHYEHHPIQYRAAVSHLLEKAVSTYSRKVILERERTGIDGTHDEISELICDLQKVAINSNESFRRVAVGPSDHFFLPSSAGHNNNDRESGIPRDEQKEEPVCAPSFPSISAHSVLGQFLFDVCVPKNVEGWDDVKFCGNRNGRSRVSPFRGIKRIGRSRL*