Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0840010 | XP_024640893.1 | 99.252 | 401 | 3 | 0 | 1 | 401 | 1 | 401 | 0.0 | 834 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0840010 | sp|Q6DBP4|PAE8_ARATH | 67.758 | 397 | 126 | 1 | 5 | 401 | 3 | 397 | 0.0 | 593 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0840010 | A0A396HMS2 | 99.233 | 391 | 3 | 0 | 1 | 391 | 1 | 391 | 0.0 | 815 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0025090 | Msa0840010 | 0.818985 | 1.472715e-52 | -8.615850e-47 |
| Msa0718960 | Msa0840010 | 0.961275 | 1.630752e-119 | -8.615850e-47 |
| Msa0801610 | Msa0840010 | 0.958879 | 7.873123e-117 | -8.615850e-47 |
| Msa0840010 | Msa1188380 | 0.805851 | 1.093562e-49 | -8.615850e-47 |
| Msa0840010 | Msa1294520 | 0.854520 | 1.165491e-61 | -8.615850e-47 |
| Msa0153290 | Msa0840010 | 0.806049 | 9.935442e-50 | -8.615850e-47 |
| Msa0378620 | Msa0840010 | 0.802245 | 6.147432e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0840010 | MtrunA17_Chr5g0408881 | 99.233 | 391 | 3 | 0 | 1 | 391 | 1 | 391 | 0.0 | 815 |
| Msa0840010 | MtrunA17_Chr8g0369651 | 71.066 | 394 | 113 | 1 | 1 | 394 | 1 | 393 | 0.0 | 602 |
| Msa0840010 | MtrunA17_Chr5g0418101 | 70.025 | 397 | 115 | 1 | 1 | 397 | 14 | 406 | 0.0 | 579 |
| Msa0840010 | MtrunA17_Chr8g0369681 | 66.497 | 394 | 130 | 1 | 1 | 394 | 1 | 392 | 0.0 | 578 |
| Msa0840010 | MtrunA17_Chr1g0193381 | 55.228 | 373 | 165 | 1 | 22 | 394 | 46 | 416 | 2.04e-160 | 457 |
| Msa0840010 | MtrunA17_Chr7g0270931 | 54.247 | 365 | 165 | 1 | 29 | 393 | 52 | 414 | 1.08e-156 | 449 |
| Msa0840010 | MtrunA17_Chr1g0193761 | 54.247 | 365 | 165 | 1 | 29 | 393 | 40 | 402 | 8.20e-155 | 442 |
| Msa0840010 | MtrunA17_Chr7g0271231 | 53.425 | 365 | 168 | 1 | 29 | 393 | 56 | 418 | 9.02e-150 | 430 |
| Msa0840010 | MtrunA17_Chr4g0069571 | 53.151 | 365 | 169 | 1 | 29 | 393 | 58 | 420 | 7.33e-148 | 426 |
| Msa0840010 | MtrunA17_Chr1g0203101 | 49.020 | 408 | 195 | 3 | 1 | 395 | 1 | 408 | 3.60e-145 | 418 |
| Msa0840010 | MtrunA17_Chr1g0203121 | 48.148 | 405 | 197 | 3 | 1 | 392 | 1 | 405 | 7.08e-142 | 410 |
| Msa0840010 | MtrunA17_Chr7g0238491 | 46.757 | 370 | 191 | 2 | 29 | 393 | 57 | 425 | 1.78e-129 | 379 |
| Msa0840010 | MtrunA17_Chr1g0163701 | 48.148 | 108 | 54 | 1 | 213 | 320 | 272 | 377 | 4.48e-26 | 108 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0840010 | AT4G19420.1 | 67.758 | 397 | 126 | 1 | 5 | 401 | 3 | 397 | 0.0 | 593 |
| Msa0840010 | AT4G19420.2 | 67.758 | 397 | 126 | 1 | 5 | 401 | 3 | 397 | 0.0 | 593 |
| Msa0840010 | AT4G19420.4 | 62.269 | 432 | 126 | 2 | 5 | 401 | 3 | 432 | 0.0 | 577 |
| Msa0840010 | AT4G19410.1 | 61.230 | 374 | 144 | 1 | 16 | 388 | 11 | 384 | 2.67e-180 | 507 |
| Msa0840010 | AT5G45280.2 | 57.853 | 382 | 159 | 2 | 9 | 388 | 3 | 384 | 5.87e-175 | 493 |
| Msa0840010 | AT4G19410.2 | 61.064 | 357 | 139 | 0 | 16 | 372 | 11 | 367 | 7.65e-170 | 485 |
| Msa0840010 | AT3G62060.1 | 54.933 | 375 | 166 | 2 | 21 | 394 | 47 | 419 | 7.73e-157 | 449 |
| Msa0840010 | AT5G26670.1 | 55.464 | 366 | 161 | 1 | 29 | 394 | 53 | 416 | 1.88e-156 | 447 |
| Msa0840010 | AT3G62060.2 | 54.667 | 375 | 167 | 2 | 21 | 394 | 47 | 419 | 5.79e-156 | 448 |
| Msa0840010 | AT3G05910.1 | 54.372 | 366 | 164 | 2 | 29 | 394 | 53 | 415 | 1.51e-152 | 437 |
| Msa0840010 | AT2G46930.1 | 52.459 | 366 | 172 | 1 | 29 | 394 | 53 | 416 | 1.69e-151 | 435 |
| Msa0840010 | AT1G57590.1 | 53.552 | 366 | 168 | 1 | 29 | 394 | 80 | 443 | 2.55e-150 | 433 |
| Msa0840010 | AT5G45280.1 | 60.396 | 303 | 119 | 1 | 9 | 310 | 3 | 305 | 2.41e-142 | 410 |
| Msa0840010 | AT5G23870.1 | 48.641 | 368 | 185 | 3 | 29 | 392 | 35 | 402 | 1.85e-136 | 397 |
| Msa0840010 | AT5G23870.4 | 48.641 | 368 | 185 | 3 | 29 | 392 | 35 | 402 | 1.85e-136 | 397 |
| Msa0840010 | AT5G23870.2 | 48.031 | 381 | 193 | 4 | 17 | 392 | 22 | 402 | 2.83e-136 | 397 |
| Msa0840010 | AT5G23870.3 | 48.031 | 381 | 193 | 4 | 17 | 392 | 22 | 402 | 4.69e-136 | 397 |
| Msa0840010 | AT3G09410.1 | 48.087 | 366 | 189 | 1 | 29 | 393 | 61 | 426 | 7.00e-133 | 388 |
| Msa0840010 | AT1G09550.1 | 50.291 | 344 | 168 | 2 | 29 | 372 | 42 | 382 | 3.26e-131 | 382 |
| Msa0840010 | AT4G19420.3 | 69.388 | 245 | 73 | 1 | 5 | 249 | 3 | 245 | 3.05e-128 | 371 |
| Msa0840010 | AT5G26670.3 | 54.667 | 300 | 134 | 1 | 95 | 394 | 1 | 298 | 2.37e-124 | 362 |
| Msa0840010 | AT5G26670.2 | 54.667 | 300 | 134 | 1 | 95 | 394 | 1 | 298 | 2.37e-124 | 362 |
| Msa0840010 | AT5G26670.4 | 54.667 | 300 | 134 | 1 | 95 | 394 | 1 | 298 | 2.37e-124 | 362 |
| Msa0840010 | AT3G09405.1 | 44.875 | 361 | 196 | 2 | 29 | 388 | 51 | 409 | 7.72e-118 | 349 |
| Msa0840010 | AT3G09410.3 | 47.416 | 329 | 172 | 1 | 29 | 356 | 61 | 389 | 2.18e-115 | 342 |
| Msa0840010 | AT3G05910.2 | 57.258 | 248 | 103 | 2 | 29 | 276 | 53 | 297 | 3.70e-102 | 305 |
| Msa0840010 | AT3G09405.2 | 44.371 | 302 | 165 | 2 | 88 | 388 | 3 | 302 | 1.06e-96 | 291 |
Find 138 sgRNAs with CRISPR-Local
Find 589 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTATAAAACCACAATTAT+TGG | 0.154943 | 5_4:-15568041 | Msa0840010:three_prime_UTR |
| TAAAATCTTCACATTGTTAT+TGG | 0.166153 | 5_4:-15571365 | Msa0840010:five_prime_UTR |
| TATAAAGTGATTCAATTTAA+TGG | 0.190172 | 5_4:+15563125 | None:intergenic |
| CTCACCTTGTTTGATAGTTT+TGG | 0.195327 | 5_4:+15567723 | None:intergenic |
| TTCAAGTTATACACCGTTTC+AGG | 0.207215 | 5_4:+15562995 | None:intergenic |
| ATTAGATCAATGGTTCATTT+TGG | 0.215651 | 5_4:-15571336 | Msa0840010:five_prime_UTR |
| TCTACAAACATTGGTTATTC+TGG | 0.220982 | 5_4:-15563895 | Msa0840010:intron |
| TAACAATGAAGCTCTCTTTC+TGG | 0.223329 | 5_4:+15563071 | None:intergenic |
| TTCCAAATCCCTTATCTAAA+TGG | 0.250767 | 5_4:+15570295 | None:intergenic |
| ATGGTTAAAATTAAATATTC+TGG | 0.261544 | 5_4:-15570802 | Msa0840010:CDS |
| TACCATTTAGATAAGGGATT+TGG | 0.266540 | 5_4:-15570297 | Msa0840010:CDS |
| TTGGAAATCAATGATGCATT+TGG | 0.285387 | 5_4:-15571238 | Msa0840010:five_prime_UTR |
| TTTCTGTGACTGTCGGTTCT+TGG | 0.289929 | 5_4:-15571669 | Msa0840010:five_prime_UTR |
| AAAATCTTCACATTGTTATT+GGG | 0.299850 | 5_4:-15571364 | Msa0840010:five_prime_UTR |
| ATATAAATGCTATGTATATA+TGG | 0.303640 | 5_4:+15568074 | None:intergenic |
| ATAAAGTGATTCAATTTAAT+GGG | 0.304677 | 5_4:+15563126 | None:intergenic |
| GGTAAGGACAATCTATCTTA+TGG | 0.307887 | 5_4:+15568177 | None:intergenic |
| AATTCTTTAACATATACTAT+TGG | 0.308878 | 5_4:-15571617 | Msa0840010:five_prime_UTR |
| TGCAGTTATGGAAGATTTGC+TGG | 0.318102 | 5_4:-15569711 | Msa0840010:CDS |
| TTTATCAAGCTATGAATATA+AGG | 0.321571 | 5_4:-15567970 | Msa0840010:three_prime_UTR |
| TTTGATTAATCACTGGGAAT+TGG | 0.327036 | 5_4:-15571257 | Msa0840010:five_prime_UTR |
| AGAAAGAGAGCTTCATTGTT+AGG | 0.342137 | 5_4:-15563069 | Msa0840010:three_prime_UTR |
| TTCTGTGACTGTCGGTTCTT+GGG | 0.348788 | 5_4:-15571668 | Msa0840010:five_prime_UTR |
| ACCTCAACAAACTTCATTTC+AGG | 0.350036 | 5_4:-15571433 | Msa0840010:five_prime_UTR |
| TGATGTGATAACTTGTAAAA+TGG | 0.352504 | 5_4:+15571467 | None:intergenic |
| TGCATTTGGGTTAGCTTGAT+TGG | 0.356248 | 5_4:-15571224 | Msa0840010:five_prime_UTR |
| CCAGCTTACCATTTAGATAA+GGG | 0.361046 | 5_4:-15570303 | Msa0840010:CDS |
| AATAGTATATGTTAAAGAAT+TGG | 0.361373 | 5_4:+15571619 | None:intergenic |
| TTCAGGTACACTTTCTTTGT+GGG | 0.373627 | 5_4:-15571416 | Msa0840010:five_prime_UTR |
| TGATTGGTTTAAACCATTAG+AGG | 0.383285 | 5_4:-15571208 | Msa0840010:intron |
| TTTCAGGTACACTTTCTTTG+TGG | 0.386551 | 5_4:-15571417 | Msa0840010:five_prime_UTR |
| ACCGATACGTCTTGCGAGAA+AGG | 0.388612 | 5_4:+15570098 | None:intergenic |
| TGGAAATCAATGATGCATTT+GGG | 0.394491 | 5_4:-15571237 | Msa0840010:five_prime_UTR |
| GTTATTTAAAATTCCTGAAA+AGG | 0.396090 | 5_4:+15570042 | None:intergenic |
| TGCAGCTGATGAAGTTCCTT+TGG | 0.403879 | 5_4:+15567767 | None:intergenic |
| ATCATACTTGTATGGCGAAA+TGG | 0.405903 | 5_4:+15563737 | None:intergenic |
| GCTAAGAAGCTTACACTGAT+TGG | 0.409643 | 5_4:+15563045 | None:intergenic |
| TTGGGTCTTAATTAGATCAA+TGG | 0.409769 | 5_4:-15571346 | Msa0840010:five_prime_UTR |
| ACTGCACTAAACTTGTGTGC+TGG | 0.410624 | 5_4:-15567936 | Msa0840010:three_prime_UTR |
| AGAGTCTATGAACATTCCTT+TGG | 0.414577 | 5_4:+15568533 | None:intergenic |
| GTTAACAGAAGGGATGTATC+TGG | 0.420364 | 5_4:-15569368 | Msa0840010:intron |
| AAATATTCTGGTGTTTGTAC+TGG | 0.420711 | 5_4:-15570790 | Msa0840010:CDS |
| ATGAAATGAATCTATACTCC+TGG | 0.429111 | 5_4:+15568107 | None:intergenic |
| TTAGATAAGGGATTTGGAAC+AGG | 0.432017 | 5_4:-15570291 | Msa0840010:CDS |
| TATTAAGAATATAGTAGCTC+TGG | 0.434022 | 5_4:+15567887 | None:intergenic |
| CATTTCACTTTAGCTCCTCT+TGG | 0.448391 | 5_4:+15569511 | None:intergenic |
| AGTCTTGAAGTGCATGATCT+AGG | 0.448651 | 5_4:+15569131 | None:intergenic |
| CTACAATTGGAACAGAATCA+AGG | 0.450624 | 5_4:-15569918 | Msa0840010:CDS |
| CTGCACTAAACTTGTGTGCT+GGG | 0.454324 | 5_4:-15567935 | Msa0840010:three_prime_UTR |
| CCCTTATCTAAATGGTAAGC+TGG | 0.455706 | 5_4:+15570303 | None:intergenic |
| ACCAGCTTACCATTTAGATA+AGG | 0.456273 | 5_4:-15570304 | Msa0840010:CDS |
| TGCGCAAAGCCTACTGGTAT+AGG | 0.457114 | 5_4:-15562942 | Msa0840010:three_prime_UTR |
| GCCTTTCTCGCAAGACGTAT+CGG | 0.457301 | 5_4:-15570099 | Msa0840010:CDS |
| ATGTTCCTTGCATTTCAGTT+TGG | 0.458452 | 5_4:+15568496 | None:intergenic |
| CTACAACAGGCTATTATCTC+AGG | 0.458717 | 5_4:-15569592 | Msa0840010:intron |
| ACTCACAAATCATACTTGTA+TGG | 0.463049 | 5_4:+15563729 | None:intergenic |
| CTCAAGAGTGCGGTATCAAA+AGG | 0.465683 | 5_4:-15570726 | Msa0840010:CDS |
| TAGTAGTGACTCTCCATCAT+TGG | 0.466285 | 5_4:-15568469 | Msa0840010:CDS |
| CAGTTGGTTAGTTCAATTTG+AGG | 0.473805 | 5_4:-15570262 | Msa0840010:intron |
| GAATTGTAGATTTCTACAAT+TGG | 0.474249 | 5_4:-15569931 | Msa0840010:intron |
| ATTTGTGATATAACATATTG+AGG | 0.475401 | 5_4:+15568993 | None:intergenic |
| TCTCGCAAGACGTATCGGTT+AGG | 0.476074 | 5_4:-15570094 | Msa0840010:CDS |
| ATCTCAGGATGTTCAGCTGG+TGG | 0.479723 | 5_4:-15569577 | Msa0840010:CDS |
| GCCGCATTCACAAGGAAGAT+TGG | 0.480970 | 5_4:+15568963 | None:intergenic |
| CTTACCGTCTTGGCCAATGA+TGG | 0.481283 | 5_4:+15568456 | None:intergenic |
| ATATGTATGTAACTAACAAA+TGG | 0.481854 | 5_4:+15571528 | None:intergenic |
| AAACGGTGTATAACTTGAAA+CGG | 0.482032 | 5_4:-15562991 | Msa0840010:three_prime_UTR |
| CGTATGGTTTCTGTGACTGT+CGG | 0.484312 | 5_4:-15571676 | Msa0840010:five_prime_UTR |
| ATGGAAGATTTGCTGGCAAA+GGG | 0.486962 | 5_4:-15569704 | Msa0840010:CDS |
| ACTTGTATGGCGAAATGGTC+CGG | 0.487045 | 5_4:+15563742 | None:intergenic |
| GTTAGGTTCATCTAAGCAAA+TGG | 0.490202 | 5_4:-15570077 | Msa0840010:CDS |
| CAATGTTTGTAGAAGCCAAC+CGG | 0.491193 | 5_4:+15563905 | None:intergenic |
| GCTCACAAACTTACCAGCCT+TGG | 0.497601 | 5_4:+15569104 | None:intergenic |
| TTTGTGATATAACATATTGA+GGG | 0.498922 | 5_4:+15568994 | None:intergenic |
| ATTATCTCAGGATGTTCAGC+TGG | 0.500171 | 5_4:-15569580 | Msa0840010:CDS |
| TCACATGTCAAAACCTGAAA+CGG | 0.501398 | 5_4:-15563008 | Msa0840010:three_prime_UTR |
| TGGCATTAAACAATGAATGA+TGG | 0.501975 | 5_4:+15567907 | None:intergenic |
| CTGCTGATCCTCGTGGACAC+TGG | 0.507401 | 5_4:-15568762 | Msa0840010:CDS |
| AGCTGATGAAGTTCCTTTGG+TGG | 0.511901 | 5_4:+15567770 | None:intergenic |
| AGTGTGGCTTCTTACCGTCT+TGG | 0.513249 | 5_4:+15568446 | None:intergenic |
| TTCAAGACTCAGTCCAAGGC+TGG | 0.518055 | 5_4:-15569117 | Msa0840010:intron |
| TTACGCGTTGATAAAGTAAC+CGG | 0.521826 | 5_4:+15569477 | None:intergenic |
| CTCCTCTTGGTAAAAGAGCT+CGG | 0.522486 | 5_4:+15569524 | None:intergenic |
| ATATTTATATATATTTCGTA+TGG | 0.523100 | 5_4:-15571692 | Msa0840010:five_prime_UTR |
| TTGAAACGGATGGTGGTGAC+TGG | 0.523206 | 5_4:-15562977 | Msa0840010:three_prime_UTR |
| TTGCAAAAGCTGTAGCAGAC+TGG | 0.525590 | 5_4:-15568220 | Msa0840010:CDS |
| GTATGGCGAAATGGTCCGGT+TGG | 0.526096 | 5_4:+15563746 | None:intergenic |
| GCAAAGTGCGCAAAGCCTAC+TGG | 0.529253 | 5_4:-15562948 | Msa0840010:three_prime_UTR |
| CTCTCCATCATTGGCCAAGA+CGG | 0.529374 | 5_4:-15568460 | Msa0840010:intron |
| TGGAGTAAATGAATAAAGAA+TGG | 0.530987 | 5_4:+15571548 | None:intergenic |
| TATGGAAGATTTGCTGGCAA+AGG | 0.533137 | 5_4:-15569705 | Msa0840010:CDS |
| TATGGCGAAATGGTCCGGTT+GGG | 0.533803 | 5_4:+15563747 | None:intergenic |
| TTAAGGGCATTGACTGCTGT+AGG | 0.537327 | 5_4:-15568567 | Msa0840010:CDS |
| CCACGAGGATCAGCAGCTCC+CGG | 0.537672 | 5_4:+15568769 | None:intergenic |
| AACAGGAGACAGTTTAATCC+AGG | 0.539572 | 5_4:-15570022 | Msa0840010:intron |
| CGGTTGGCTTCTACAAACAT+TGG | 0.539667 | 5_4:-15563904 | Msa0840010:three_prime_UTR |
| TTGGAACAGGAATTAACAGT+TGG | 0.547070 | 5_4:-15570278 | Msa0840010:CDS |
| TCAGGTACACTTTCTTTGTG+GGG | 0.547095 | 5_4:-15571415 | Msa0840010:five_prime_UTR |
| ACCAATCTTCCTTGTGAATG+CGG | 0.548127 | 5_4:-15568964 | Msa0840010:CDS |
| GTTTGTACTGGCACTGCTGA+AGG | 0.550248 | 5_4:-15570778 | Msa0840010:CDS |
| GTGAAATGCCTCTCAGATGC+CGG | 0.552096 | 5_4:-15569496 | Msa0840010:CDS |
| AGAATACAAGATTTAGCCAA+TGG | 0.554190 | 5_4:-15570821 | Msa0840010:CDS |
| TGAATGCGGCATACGACTCA+TGG | 0.554322 | 5_4:-15568950 | Msa0840010:CDS |
| TGAAATGAATCTATACTCCT+GGG | 0.560580 | 5_4:+15568108 | None:intergenic |
| GAAGTTTGTTGAGGTGAGTG+TGG | 0.562125 | 5_4:+15571441 | None:intergenic |
| CAACTCGGATTGCAAGGGTA+AGG | 0.564647 | 5_4:+15568161 | None:intergenic |
| GCACTCTTGAGTAAAGTGAT+TGG | 0.568437 | 5_4:+15570738 | None:intergenic |
| TGCGGCATACGACTCATGGC+AGG | 0.571149 | 5_4:-15568946 | Msa0840010:intron |
| TCTCAGGATGTTCAGCTGGT+GGG | 0.573812 | 5_4:-15569576 | Msa0840010:CDS |
| ATTGACTGCTTCCACATCAC+CGG | 0.575655 | 5_4:+15569868 | None:intergenic |
| GTAACTAAGTTGCACTTCAG+AGG | 0.593861 | 5_4:-15569749 | Msa0840010:CDS |
| AGTCGTATGCCGCATTCACA+AGG | 0.594968 | 5_4:+15568955 | None:intergenic |
| CACTGCCAAACTGAAATGCA+AGG | 0.595547 | 5_4:-15568501 | Msa0840010:CDS |
| GCACTGCTGAAGGTAGAAGC+TGG | 0.602771 | 5_4:-15570768 | Msa0840010:CDS |
| AAACTGAAATGCAAGGAACA+TGG | 0.604137 | 5_4:-15568494 | Msa0840010:CDS |
| CCTGTTTAAAATTACAACAA+AGG | 0.604244 | 5_4:+15562825 | None:intergenic |
| TAATTCCTTATCAGGCACAA+TGG | 0.604353 | 5_4:-15563950 | Msa0840010:intron |
| AGCACACAAGTTTAGTGCAG+TGG | 0.604896 | 5_4:+15567938 | None:intergenic |
| TTATCTAAATGGTAAGCTGG+TGG | 0.607189 | 5_4:+15570306 | None:intergenic |
| CTAGTTAAAACCAATAATTG+TGG | 0.608921 | 5_4:+15568031 | None:intergenic |
| TATATTGCACCTATACCAGT+AGG | 0.611594 | 5_4:+15562933 | None:intergenic |
| GCACTTCAAGACTCAGTCCA+AGG | 0.614843 | 5_4:-15569121 | Msa0840010:CDS |
| GTGAGTGGTGGAATGAGAAG+TGG | 0.614960 | 5_4:+15571583 | None:intergenic |
| GTAGGAAACTCTACATCCAA+AGG | 0.616333 | 5_4:-15568549 | Msa0840010:CDS |
| CCGGGAGCTGCTGATCCTCG+TGG | 0.625720 | 5_4:-15568769 | Msa0840010:CDS |
| AGTGCGGTATCAAAAGGAGC+CGG | 0.625776 | 5_4:-15570720 | Msa0840010:intron |
| AATCAACTAGATCTAATGCA+AGG | 0.629815 | 5_4:-15568703 | Msa0840010:intron |
| ATCAAGGTTAGATATTGTGA+CGG | 0.630613 | 5_4:-15569902 | Msa0840010:CDS |
| GGTGTATAACTTGAAACGGA+TGG | 0.635608 | 5_4:-15562987 | Msa0840010:three_prime_UTR |
| ACCTGAAATGAAGTTTGTTG+AGG | 0.637545 | 5_4:+15571432 | None:intergenic |
| CAGCTGTGCCAGTGTCCACG+AGG | 0.670610 | 5_4:+15568754 | None:intergenic |
| TTTGAACCACAAGAAAACCC+AGG | 0.673553 | 5_4:-15568125 | Msa0840010:CDS |
| TAAAGTAACCGGCATCTGAG+AGG | 0.680860 | 5_4:+15569488 | None:intergenic |
| TTGATGAAGAAAGTGAGTGG+TGG | 0.690777 | 5_4:+15571571 | None:intergenic |
| ATATAATGCTAACAGCACAA+TGG | 0.694625 | 5_4:-15562915 | Msa0840010:three_prime_UTR |
| AATCACTTTACTCAAGAGTG+CGG | 0.706525 | 5_4:-15570736 | Msa0840010:CDS |
| TGGTTGATGAAGAAAGTGAG+TGG | 0.735638 | 5_4:+15571568 | None:intergenic |
| GTATAACTTGAAACGGATGG+TGG | 0.777717 | 5_4:-15562984 | Msa0840010:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTATATATATTTCGTA+TGG | - | chr5_4:15562844-15562863 | Msa0840010:three_prime_UTR | 10.0% |
| !!! | GATCATTTATTTTTATTTAT+AGG | + | chr5_4:15567299-15567318 | None:intergenic | 10.0% |
| !! | CAAAATTATGAATATTTATA+TGG | + | chr5_4:15567321-15567340 | None:intergenic | 10.0% |
| !! | AATAGTATATGTTAAAGAAT+TGG | + | chr5_4:15562920-15562939 | None:intergenic | 15.0% |
| !! | AATTCTTTAACATATACTAT+TGG | - | chr5_4:15562919-15562938 | Msa0840010:three_prime_UTR | 15.0% |
| !!! | TTTTTCTTTCAAAAGTAATA+TGG | + | chr5_4:15563470-15563489 | None:intergenic | 15.0% |
| !!! | AAAAAAGTTTTCATGAATAT+TGG | - | chr5_4:15563489-15563508 | Msa0840010:intron | 15.0% |
| !!! | GAATATTTAATTTTAACCAT+TGG | + | chr5_4:15563734-15563753 | None:intergenic | 15.0% |
| !! | ATGGTTAAAATTAAATATTC+TGG | - | chr5_4:15563734-15563753 | Msa0840010:intron | 15.0% |
| !! | TCAAAACATTAATTTATTGA+TGG | + | chr5_4:15564321-15564340 | None:intergenic | 15.0% |
| !!! | ATTTCAATTTCAATTTTGTT+AGG | - | chr5_4:15564384-15564403 | Msa0840010:intron | 15.0% |
| !!! | TTTCAATTTCAATTTTGTTA+GGG | - | chr5_4:15564385-15564404 | Msa0840010:intron | 15.0% |
| !! | CAATTATTAGAACAAAAATT+GGG | + | chr5_4:15564581-15564600 | None:intergenic | 15.0% |
| !! | ACAATTATTAGAACAAAAAT+TGG | + | chr5_4:15564582-15564601 | None:intergenic | 15.0% |
| !!! | TAAGTTTTAACAAAATTCAA+AGG | - | chr5_4:15564695-15564714 | Msa0840010:intron | 15.0% |
| !! | GAATCAAATACAATTATTTA+AGG | + | chr5_4:15565137-15565156 | None:intergenic | 15.0% |
| !! | ATATAAATGCTATGTATATA+TGG | + | chr5_4:15566465-15566484 | None:intergenic | 15.0% |
| !!! | TTTTTTATTAGTGGTTAAAA+AGG | - | chr5_4:15567524-15567543 | Msa0840010:intron | 15.0% |
| !! | AAATTATCCTTATAAATATC+TGG | + | chr5_4:15567555-15567574 | None:intergenic | 15.0% |
| !! | AAGGATAAGAATTAAAAATA+TGG | + | chr5_4:15571109-15571128 | None:intergenic | 15.0% |
| !! | ATAAAGTGATTCAATTTAAT+GGG | + | chr5_4:15571413-15571432 | None:intergenic | 15.0% |
| !! | TATAAAGTGATTCAATTTAA+TGG | + | chr5_4:15571414-15571433 | None:intergenic | 15.0% |
| !! | ATATGTATGTAACTAACAAA+TGG | + | chr5_4:15563011-15563030 | None:intergenic | 20.0% |
| !! | TAAAATCTTCACATTGTTAT+TGG | - | chr5_4:15563171-15563190 | Msa0840010:three_prime_UTR | 20.0% |
| !!! | AAAATCTTCACATTGTTATT+GGG | - | chr5_4:15563172-15563191 | Msa0840010:three_prime_UTR | 20.0% |
| !!! | TTTTTGATTTGATTAATCAC+TGG | - | chr5_4:15563272-15563291 | Msa0840010:intron | 20.0% |
| !!! | TTTTGATTTGATTAATCACT+GGG | - | chr5_4:15563273-15563292 | Msa0840010:intron | 20.0% |
| !! | GTTTGTGTATTTATTGAATT+TGG | - | chr5_4:15563372-15563391 | Msa0840010:intron | 20.0% |
| !!! | TTGATTTTTATGACAATTCT+TGG | - | chr5_4:15564337-15564356 | Msa0840010:intron | 20.0% |
| !!! | GTTATTTAAAATTCCTGAAA+AGG | + | chr5_4:15564497-15564516 | None:intergenic | 20.0% |
| !!! | TTTCAGGAATTTTAAATAAC+AGG | - | chr5_4:15564497-15564516 | Msa0840010:intron | 20.0% |
| !!! | TGAATTTTGTTAAAACTTAC+TGG | + | chr5_4:15564694-15564713 | None:intergenic | 20.0% |
| !!! | AAGAATTTTTAATGCAGTTA+TGG | - | chr5_4:15564813-15564832 | Msa0840010:intron | 20.0% |
| !!! | AAAGTATCATTCAAATGAAA+AGG | + | chr5_4:15565297-15565316 | None:intergenic | 20.0% |
| !!! | AAAATCAGACTAGAATATTT+TGG | + | chr5_4:15565344-15565363 | None:intergenic | 20.0% |
| !! | ATAAATAACAACACCAAAAA+AGG | + | chr5_4:15565487-15565506 | None:intergenic | 20.0% |
| !! | TTTGTGATATAACATATTGA+GGG | + | chr5_4:15565545-15565564 | None:intergenic | 20.0% |
| !! | ATTTGTGATATAACATATTG+AGG | + | chr5_4:15565546-15565565 | None:intergenic | 20.0% |
| !!! | CTTTAGAACACAATTTTTAA+GGG | - | chr5_4:15565953-15565972 | Msa0840010:intron | 20.0% |
| !! | TCTTATAAAACCACAATTAT+TGG | - | chr5_4:15566495-15566514 | Msa0840010:intron | 20.0% |
| !! | TTTATCAAGCTATGAATATA+AGG | - | chr5_4:15566566-15566585 | Msa0840010:intron | 20.0% |
| !! | TTACATTTGTATATTGGAAA+TGG | + | chr5_4:15566879-15566898 | None:intergenic | 20.0% |
| !! | TACTATCAATTCATAAATTC+CGG | + | chr5_4:15567040-15567059 | None:intergenic | 20.0% |
| !! | TGTTTAAGTCAAAACTAAAA+TGG | + | chr5_4:15567194-15567213 | None:intergenic | 20.0% |
| !!! | ATTTTTATTTATAGGGCTTT+TGG | + | chr5_4:15567291-15567310 | None:intergenic | 20.0% |
| !!! | AAGGAAAAGTTTTTTATTAG+TGG | - | chr5_4:15567515-15567534 | Msa0840010:intron | 20.0% |
| !! | TTCACCATTAAAACAAAATT+AGG | - | chr5_4:15567589-15567608 | Msa0840010:intron | 20.0% |
| !! | TCACCATTAAAACAAAATTA+GGG | - | chr5_4:15567590-15567609 | Msa0840010:intron | 20.0% |
| !!! | AAACCCTAATTTTGTTTTAA+TGG | + | chr5_4:15567596-15567615 | None:intergenic | 20.0% |
| !! | TTCATTGGATTATATTTCTT+CGG | + | chr5_4:15568254-15568273 | None:intergenic | 20.0% |
| !! | TGTTATTAGCAAAGTTATAT+CGG | - | chr5_4:15568355-15568374 | Msa0840010:intron | 20.0% |
| !!! | GAAGATAACATTTTGATTAT+TGG | - | chr5_4:15568812-15568831 | Msa0840010:intron | 20.0% |
| !!! | ATGTCTTTAAACAGTTTTTA+TGG | - | chr5_4:15569220-15569239 | Msa0840010:intron | 20.0% |
| !!! | TGTCTTTAAACAGTTTTTAT+GGG | - | chr5_4:15569221-15569240 | Msa0840010:intron | 20.0% |
| !! | ACAGTGTTAGATAATAAATA+TGG | - | chr5_4:15569403-15569422 | Msa0840010:intron | 20.0% |
| !! | TCTAAATTTAGAAAGAAGAT+TGG | - | chr5_4:15569535-15569554 | Msa0840010:CDS | 20.0% |
| !!! | TGAATTTTTCTTTAAGTGTT+AGG | - | chr5_4:15570122-15570141 | Msa0840010:CDS | 20.0% |
| !! | AAGGAATTAAAAATGAGAAA+TGG | + | chr5_4:15570575-15570594 | None:intergenic | 20.0% |
| !!! | TGTTTTCATTTGAAGTAAAT+TGG | - | chr5_4:15571007-15571026 | Msa0840010:intron | 20.0% |
| !!! | GTTTTCATTTGAAGTAAATT+GGG | - | chr5_4:15571008-15571027 | Msa0840010:intron | 20.0% |
| !!! | ATGAACTAATATTGTTCTTT+TGG | - | chr5_4:15571309-15571328 | Msa0840010:five_prime_UTR | 20.0% |
| !!! | TTCTCTTATTTTAGAAATGA+TGG | - | chr5_4:15571336-15571355 | Msa0840010:five_prime_UTR | 20.0% |
| !!! | TCTCTTATTTTAGAAATGAT+GGG | - | chr5_4:15571337-15571356 | Msa0840010:five_prime_UTR | 20.0% |
| ! | TGGAGTAAATGAATAAAGAA+TGG | + | chr5_4:15562991-15563010 | None:intergenic | 25.0% |
| !! | TGATGTGATAACTTGTAAAA+TGG | + | chr5_4:15563072-15563091 | None:intergenic | 25.0% |
| !! | ATTAGATCAATGGTTCATTT+TGG | - | chr5_4:15563200-15563219 | Msa0840010:intron | 25.0% |
| !! | TCTCTAAAAAAAACCTCTAA+TGG | + | chr5_4:15563344-15563363 | None:intergenic | 25.0% |
| ! | AATGAATTGCTTCATCAAAA+GGG | + | chr5_4:15563414-15563433 | None:intergenic | 25.0% |
| !! | TGAATATTGGTTGATTGATA+AGG | - | chr5_4:15563502-15563521 | Msa0840010:intron | 25.0% |
| ! | TTCAATGCAAGAATACAAAA+TGG | - | chr5_4:15563583-15563602 | Msa0840010:intron | 25.0% |
| !!! | TAGCTTTAGTATATTCTGTT+TGG | - | chr5_4:15563884-15563903 | Msa0840010:intron | 25.0% |
| !!! | TAAATTTTGTGCAGTTTGTT+TGG | - | chr5_4:15564199-15564218 | Msa0840010:intron | 25.0% |
| !! | CTTGGAAGATTCTATATTTT+TGG | - | chr5_4:15564355-15564374 | Msa0840010:intron | 25.0% |
| !! | AATTTCAATTTTGTTAGGGA+GGG | - | chr5_4:15564389-15564408 | Msa0840010:intron | 25.0% |
| ! | GAATTGTAGATTTCTACAAT+TGG | - | chr5_4:15564605-15564624 | Msa0840010:intron | 25.0% |
| ! | AATTTCATCTGAAAAGAAGA+GGG | + | chr5_4:15564740-15564759 | None:intergenic | 25.0% |
| ! | AAATTTCATCTGAAAAGAAG+AGG | + | chr5_4:15564741-15564760 | None:intergenic | 25.0% |
| ! | AATAATATGACGTGTAAATC+AGG | - | chr5_4:15564765-15564784 | Msa0840010:intron | 25.0% |
| ! | TTAAGGAACTTCAAAAGATT+AGG | + | chr5_4:15565120-15565139 | None:intergenic | 25.0% |
| !! | AATATGTTTCTGTTAACAGA+AGG | - | chr5_4:15565157-15565176 | Msa0840010:intron | 25.0% |
| !! | ATATGTTTCTGTTAACAGAA+GGG | - | chr5_4:15565158-15565177 | Msa0840010:intron | 25.0% |
| ! | TATCCAGGTTTCATTAATTT+GGG | + | chr5_4:15565265-15565284 | None:intergenic | 25.0% |
| ! | ATATCCAGGTTTCATTAATT+TGG | + | chr5_4:15565266-15565285 | None:intergenic | 25.0% |
| ! | AAAAAAGGAATTGCAAATGT+AGG | + | chr5_4:15565472-15565491 | None:intergenic | 25.0% |
| !!! | TACATTTGCAATTCCTTTTT+TGG | - | chr5_4:15565471-15565490 | Msa0840010:intron | 25.0% |
| !! | GGATATCTCATGTTATTTAA+AGG | + | chr5_4:15565681-15565700 | None:intergenic | 25.0% |
| !!! | GCTTTAGAACACAATTTTTA+AGG | - | chr5_4:15565952-15565971 | Msa0840010:intron | 25.0% |
| ! | ACACAAAATAGTTATATGCT+TGG | + | chr5_4:15566222-15566241 | None:intergenic | 25.0% |
| ! | AATGCATAAAGTCAGTTATT+CGG | + | chr5_4:15566276-15566295 | None:intergenic | 25.0% |
| ! | CTAGTTAAAACCAATAATTG+TGG | + | chr5_4:15566508-15566527 | None:intergenic | 25.0% |
| ! | TATTAAGAATATAGTAGCTC+TGG | + | chr5_4:15566652-15566671 | None:intergenic | 25.0% |
| ! | AATCAAGTAGCAAAAACATA+GGG | + | chr5_4:15566698-15566717 | None:intergenic | 25.0% |
| ! | AAATCAAGTAGCAAAAACAT+AGG | + | chr5_4:15566699-15566718 | None:intergenic | 25.0% |
| !!! | TTTGATAGTTTTGGAAAACT+GGG | + | chr5_4:15566807-15566826 | None:intergenic | 25.0% |
| !! | TTTTCCAAAACTATCAAACA+AGG | - | chr5_4:15566809-15566828 | Msa0840010:intron | 25.0% |
| ! | ACTATCAATTCATAAATTCC+GGG | + | chr5_4:15567039-15567058 | None:intergenic | 25.0% |
| ! | AAGTCAAAACTAAAATGGAT+AGG | + | chr5_4:15567189-15567208 | None:intergenic | 25.0% |
| ! | GAAGTTAATAGTCAATCTAA+AGG | - | chr5_4:15567227-15567246 | Msa0840010:intron | 25.0% |
| !!! | GTTCGTTTTTTTTTTTTGTG+TGG | + | chr5_4:15567380-15567399 | None:intergenic | 25.0% |
| !!! | ACATTTTTTATCCCTCAAAA+TGG | - | chr5_4:15567490-15567509 | Msa0840010:intron | 25.0% |
| ! | GGAAATTCCAGATATTTATA+AGG | - | chr5_4:15567545-15567564 | Msa0840010:intron | 25.0% |
| !!! | GGTTTTATTTAAACTTTGAG+CGG | - | chr5_4:15567611-15567630 | Msa0840010:intron | 25.0% |
| !!! | GTTTTATTTAAACTTTGAGC+GGG | - | chr5_4:15567612-15567631 | Msa0840010:intron | 25.0% |
| !! | TAATGTTTCATACTCTTTTC+TGG | + | chr5_4:15567868-15567887 | None:intergenic | 25.0% |
| !! | TTATTAAAGTGGATTTCTTG+AGG | - | chr5_4:15568159-15568178 | Msa0840010:CDS | 25.0% |
| !! | TATTAAAGTGGATTTCTTGA+GGG | - | chr5_4:15568160-15568179 | Msa0840010:CDS | 25.0% |
| !!! | ACTAATGGAAAACTTGTTAA+AGG | - | chr5_4:15568200-15568219 | Msa0840010:CDS | 25.0% |
| !! | ATGATGTTTAAAGTGAGTTT+CGG | - | chr5_4:15568476-15568495 | Msa0840010:CDS | 25.0% |
| ! | TAAAAGATTCTATTGCTATG+AGG | + | chr5_4:15568703-15568722 | None:intergenic | 25.0% |
| !!! | AATCTTTTAATTTGATGACG+AGG | - | chr5_4:15568714-15568733 | Msa0840010:CDS | 25.0% |
| ! | AACAACTGTGAGAATATTAT+TGG | - | chr5_4:15568839-15568858 | Msa0840010:intron | 25.0% |
| !! | GTCTTTAAACAGTTTTTATG+GGG | - | chr5_4:15569222-15569241 | Msa0840010:intron | 25.0% |
| !! | TCTTTAAACAGTTTTTATGG+GGG | - | chr5_4:15569223-15569242 | Msa0840010:intron | 25.0% |
| ! | AGGAAGTTAGGAAAATATAT+TGG | - | chr5_4:15569251-15569270 | Msa0840010:intron | 25.0% |
| ! | GGAAGTTAGGAAAATATATT+GGG | - | chr5_4:15569252-15569271 | Msa0840010:intron | 25.0% |
| ! | TGTAAATGGAGAAAAATATC+AGG | - | chr5_4:15569363-15569382 | Msa0840010:CDS | 25.0% |
| ! | GTAAATGGAGAAAAATATCA+GGG | - | chr5_4:15569364-15569383 | Msa0840010:intron | 25.0% |
| ! | AATAAATATGGTGTAAGTGA+AGG | - | chr5_4:15569415-15569434 | Msa0840010:intron | 25.0% |
| ! | ATAATCAATGAAGACATTAG+AGG | - | chr5_4:15569439-15569458 | Msa0840010:intron | 25.0% |
| !!! | TAGATGAAAACCATTGATTT+TGG | + | chr5_4:15569519-15569538 | None:intergenic | 25.0% |
| ! | TTTAGAAAGAAGATTGGAAA+TGG | - | chr5_4:15569541-15569560 | Msa0840010:CDS | 25.0% |
| !!! | ATTGTTCTTGCTCTTATTTT+GGG | - | chr5_4:15570260-15570279 | Msa0840010:intron | 25.0% |
| ! | AGTATCAGATATATATGATG+TGG | - | chr5_4:15570407-15570426 | Msa0840010:intron | 25.0% |
| !!! | CTCATTTTTAATTCCTTATC+AGG | - | chr5_4:15570578-15570597 | Msa0840010:intron | 25.0% |
| !! | TCAGCAAATATAGCTTTTAT+AGG | + | chr5_4:15570763-15570782 | None:intergenic | 25.0% |
| !!! | AATTTTTTCCTCACTTTTCA+AGG | - | chr5_4:15570875-15570894 | Msa0840010:intron | 25.0% |
| !! | ATACTTATAACAAACTTGCT+AGG | + | chr5_4:15570988-15571007 | None:intergenic | 25.0% |
| !! | CCTGTTTAAAATTACAACAA+AGG | + | chr5_4:15571714-15571733 | None:intergenic | 25.0% |
| !!! | CCTTTGTTGTAATTTTAAAC+AGG | - | chr5_4:15571711-15571730 | Msa0840010:five_prime_UTR | 25.0% |
| TTGGGTCTTAATTAGATCAA+TGG | - | chr5_4:15563190-15563209 | Msa0840010:intron | 30.0% | |
| TTTGATTAATCACTGGGAAT+TGG | - | chr5_4:15563279-15563298 | Msa0840010:intron | 30.0% | |
| TTGGAAATCAATGATGCATT+TGG | - | chr5_4:15563298-15563317 | Msa0840010:intron | 30.0% | |
| TGGAAATCAATGATGCATTT+GGG | - | chr5_4:15563299-15563318 | Msa0840010:intron | 30.0% | |
| !! | TGATTGGTTTAAACCATTAG+AGG | - | chr5_4:15563328-15563347 | Msa0840010:intron | 30.0% |
| CAATGAATTGCTTCATCAAA+AGG | + | chr5_4:15563415-15563434 | None:intergenic | 30.0% | |
| ! | CTTTTGATGAAGCAATTCAT+TGG | - | chr5_4:15563413-15563432 | Msa0840010:intron | 30.0% |
| CTTATTCCTTGAGTTACAAA+GGG | - | chr5_4:15563644-15563663 | Msa0840010:intron | 30.0% | |
| !! | TTTGTTTGATTTGTGCAGAA+TGG | - | chr5_4:15563692-15563711 | Msa0840010:intron | 30.0% |
| AGAATACAAGATTTAGCCAA+TGG | - | chr5_4:15563715-15563734 | Msa0840010:intron | 30.0% | |
| AAATATTCTGGTGTTTGTAC+TGG | - | chr5_4:15563746-15563765 | Msa0840010:three_prime_UTR | 30.0% | |
| AGGAAAAAAAAACTCCTAAC+CGG | + | chr5_4:15563838-15563857 | None:intergenic | 30.0% | |
| AACAGACAAACAGAAAAGTA+AGG | + | chr5_4:15563858-15563877 | None:intergenic | 30.0% | |
| ACAGTTTATGACAAGTTCAT+AGG | + | chr5_4:15564044-15564063 | None:intergenic | 30.0% | |
| TAAGCACTTGTGAAAGTTTA+TGG | + | chr5_4:15564069-15564088 | None:intergenic | 30.0% | |
| TACCATTTAGATAAGGGATT+TGG | - | chr5_4:15564239-15564258 | Msa0840010:intron | 30.0% | |
| TTCCAAATCCCTTATCTAAA+TGG | + | chr5_4:15564244-15564263 | None:intergenic | 30.0% | |
| ! | CAATTTCAATTTTGTTAGGG+AGG | - | chr5_4:15564388-15564407 | Msa0840010:intron | 30.0% |
| ! | ATTTCAATTTTGTTAGGGAG+GGG | - | chr5_4:15564390-15564409 | Msa0840010:intron | 30.0% |
| ATTTACTAGCACAAAATACC+TGG | + | chr5_4:15564535-15564554 | None:intergenic | 30.0% | |
| ! | AGGTATTTTGTGCTAGTAAA+TGG | - | chr5_4:15564534-15564553 | Msa0840010:intron | 30.0% |
| ATCAAGGTTAGATATTGTGA+CGG | - | chr5_4:15564634-15564653 | Msa0840010:intron | 30.0% | |
| ATTTCATCTGAAAAGAAGAG+GGG | + | chr5_4:15564739-15564758 | None:intergenic | 30.0% | |
| TTTCCCAAATTAATGAAACC+TGG | - | chr5_4:15565259-15565278 | Msa0840010:intron | 30.0% | |
| AAAAGGTTGAAAACATATCC+AGG | + | chr5_4:15565280-15565299 | None:intergenic | 30.0% | |
| ! | TTCCGTCTTTTCTTTCTAAT+AGG | - | chr5_4:15565365-15565384 | Msa0840010:intron | 30.0% |
| ! | TCCGTCTTTTCTTTCTAATA+GGG | - | chr5_4:15565366-15565385 | Msa0840010:intron | 30.0% |
| ATAACATGAGATATCCAACA+TGG | - | chr5_4:15565685-15565704 | Msa0840010:intron | 30.0% | |
| !! | GATTAAGAACATTTTAGCAC+CGG | - | chr5_4:15565748-15565767 | Msa0840010:intron | 30.0% |
| !! | ATTAAGAACATTTTAGCACC+GGG | - | chr5_4:15565749-15565768 | Msa0840010:intron | 30.0% |
| AATCAACTAGATCTAATGCA+AGG | - | chr5_4:15565833-15565852 | Msa0840010:intron | 30.0% | |
| ! | TTTACCATGACTTGATTTTC+AGG | - | chr5_4:15565930-15565949 | Msa0840010:intron | 30.0% |
| TTACGGAAAAAAGAATAGTG+TGG | + | chr5_4:15566109-15566128 | None:intergenic | 30.0% | |
| ! | TTTTCCGTAATCTTTTTCCA+CGG | - | chr5_4:15566119-15566138 | Msa0840010:intron | 30.0% |
| TGAAATGAATCTATACTCCT+GGG | + | chr5_4:15566431-15566450 | None:intergenic | 30.0% | |
| ATGAAATGAATCTATACTCC+TGG | + | chr5_4:15566432-15566451 | None:intergenic | 30.0% | |
| TGGCATTAAACAATGAATGA+TGG | + | chr5_4:15566632-15566651 | None:intergenic | 30.0% | |
| !!! | GTTTGATAGTTTTGGAAAAC+TGG | + | chr5_4:15566808-15566827 | None:intergenic | 30.0% |
| GCTGTGTTACATTTGTATAT+TGG | + | chr5_4:15566885-15566904 | None:intergenic | 30.0% | |
| AACCAGTTTGATTCCAAATA+TGG | - | chr5_4:15566982-15567001 | Msa0840010:intron | 30.0% | |
| ! | TAATGCTATTTGGCCATATT+TGG | + | chr5_4:15566998-15567017 | None:intergenic | 30.0% |
| GGATTGGATATAATGCTATT+TGG | + | chr5_4:15567008-15567027 | None:intergenic | 30.0% | |
| ATTTGTTCATATCTACTTGC+TGG | + | chr5_4:15567084-15567103 | None:intergenic | 30.0% | |
| ! | AGTTAATTTCGCGTTTGTTA+AGG | - | chr5_4:15568124-15568143 | Msa0840010:CDS | 30.0% |
| ! | GTGATGGAATTTCATACTAA+TGG | - | chr5_4:15568185-15568204 | Msa0840010:CDS | 30.0% |
| CTAAAATCAGACACATTCAT+TGG | + | chr5_4:15568269-15568288 | None:intergenic | 30.0% | |
| TTTAGACGTGTTTCGTTAAA+TGG | - | chr5_4:15568284-15568303 | Msa0840010:intron | 30.0% | |
| TTAGACGTGTTTCGTTAAAT+GGG | - | chr5_4:15568285-15568304 | Msa0840010:intron | 30.0% | |
| !! | TATCAAAAGTTTTGGCGAAT+AGG | - | chr5_4:15568324-15568343 | Msa0840010:intron | 30.0% |
| AGGCTTATGAATCTATTGAT+TGG | - | chr5_4:15568504-15568523 | Msa0840010:CDS | 30.0% | |
| ! | ATCTATTGATTGGAGTTATC+TGG | - | chr5_4:15568514-15568533 | Msa0840010:CDS | 30.0% |
| AAATGAGATTTCATGCTAGA+TGG | - | chr5_4:15568552-15568571 | Msa0840010:CDS | 30.0% | |
| ATGGATCTTAGAATGTTTGA+AGG | - | chr5_4:15568580-15568599 | Msa0840010:CDS | 30.0% | |
| ATTGCTATGAGGAAAAGAAA+TGG | + | chr5_4:15568692-15568711 | None:intergenic | 30.0% | |
| TCAAGAATGTCATTCCATAA+AGG | + | chr5_4:15568877-15568896 | None:intergenic | 30.0% | |
| TTATGGAATGACATTCTTGA+TGG | - | chr5_4:15568877-15568896 | Msa0840010:intron | 30.0% | |
| TATGGAATGACATTCTTGAT+GGG | - | chr5_4:15568878-15568897 | Msa0840010:intron | 30.0% | |
| ! | AGTCTTCCTTTTACATATCT+TGG | - | chr5_4:15568998-15569017 | Msa0840010:CDS | 30.0% |
| ! | GTGATTTGATGATTACAACA+CGG | + | chr5_4:15569132-15569151 | None:intergenic | 30.0% |
| ! | CTTTAAACAGTTTTTATGGG+GGG | - | chr5_4:15569224-15569243 | Msa0840010:intron | 30.0% |
| ATATTGGGTCAAATGAGATA+AGG | - | chr5_4:15569267-15569286 | Msa0840010:intron | 30.0% | |
| GTTTGTCTGACAAAATAAGA+GGG | - | chr5_4:15569289-15569308 | Msa0840010:intron | 30.0% | |
| CACTACTAGGAAAATGTAAA+TGG | - | chr5_4:15569349-15569368 | Msa0840010:CDS | 30.0% | |
| AAAGAAGATTGGAAATGGTT+TGG | - | chr5_4:15569546-15569565 | Msa0840010:CDS | 30.0% | |
| ! | CTAGTGTTTGGAACAATTAT+TGG | - | chr5_4:15569572-15569591 | Msa0840010:CDS | 30.0% |
| ! | AGTTTCATTGAATGAGTTGA+TGG | - | chr5_4:15569734-15569753 | Msa0840010:CDS | 30.0% |
| TTGAGTATGAAATGCTTGTA+AGG | - | chr5_4:15569833-15569852 | Msa0840010:intron | 30.0% | |
| ATGAGGAAGAACATTAATTG+TGG | - | chr5_4:15570051-15570070 | Msa0840010:CDS | 30.0% | |
| TGAGGAAGAACATTAATTGT+GGG | - | chr5_4:15570052-15570071 | Msa0840010:CDS | 30.0% | |
| TTTCTTTAAGTGTTAGGCAA+TGG | - | chr5_4:15570128-15570147 | Msa0840010:CDS | 30.0% | |
| !! | CATTGTTCTTGCTCTTATTT+TGG | - | chr5_4:15570259-15570278 | Msa0840010:intron | 30.0% |
| ! | TCTACAAACATTGGTTATTC+TGG | - | chr5_4:15570641-15570660 | Msa0840010:intron | 30.0% |
| TTGTAAATGCTGCAAATGAT+TGG | - | chr5_4:15570705-15570724 | Msa0840010:intron | 30.0% | |
| ACTCACAAATCATACTTGTA+TGG | + | chr5_4:15570810-15570829 | None:intergenic | 30.0% | |
| ATCCTTCTTGTATTGAACAT+TGG | - | chr5_4:15571123-15571142 | Msa0840010:intron | 30.0% | |
| AACCAATGTTCAATACAAGA+AGG | + | chr5_4:15571128-15571147 | None:intergenic | 30.0% | |
| TCATCAAATAAGTCAACCTA+AGG | + | chr5_4:15571293-15571312 | None:intergenic | 30.0% | |
| AAACGGTGTATAACTTGAAA+CGG | - | chr5_4:15571545-15571564 | Msa0840010:five_prime_UTR | 30.0% | |
| ATATAATGCTAACAGCACAA+TGG | - | chr5_4:15571621-15571640 | Msa0840010:five_prime_UTR | 30.0% | |
| ACCTCAACAAACTTCATTTC+AGG | - | chr5_4:15563103-15563122 | Msa0840010:three_prime_UTR | 35.0% | |
| !! | ACCTGAAATGAAGTTTGTTG+AGG | + | chr5_4:15563107-15563126 | None:intergenic | 35.0% |
| ! | TTTCAGGTACACTTTCTTTG+TGG | - | chr5_4:15563119-15563138 | Msa0840010:three_prime_UTR | 35.0% |
| TTCAGGTACACTTTCTTTGT+GGG | - | chr5_4:15563120-15563139 | Msa0840010:three_prime_UTR | 35.0% | |
| !!! | GTTTTTTTCCCTCCCTATTA+AGG | - | chr5_4:15563609-15563628 | Msa0840010:intron | 35.0% |
| ! | GCTAGTGAATAGCCTTAATA+GGG | + | chr5_4:15563624-15563643 | None:intergenic | 35.0% |
| CCTTTGTAACTCAAGGAATA+AGG | + | chr5_4:15563646-15563665 | None:intergenic | 35.0% | |
| CCTTATTCCTTGAGTTACAA+AGG | - | chr5_4:15563643-15563662 | Msa0840010:intron | 35.0% | |
| AGTTACAAAGGGAAACTCAT+AGG | - | chr5_4:15563655-15563674 | Msa0840010:intron | 35.0% | |
| AATCACTTTACTCAAGAGTG+CGG | - | chr5_4:15563800-15563819 | Msa0840010:intron | 35.0% | |
| AGCACAATCAAAGTCATGTT+TGG | + | chr5_4:15564121-15564140 | None:intergenic | 35.0% | |
| !! | TTTTGTGCAGTTTGTTTGGA+TGG | - | chr5_4:15564203-15564222 | Msa0840010:intron | 35.0% |
| TTATCTAAATGGTAAGCTGG+TGG | + | chr5_4:15564233-15564252 | None:intergenic | 35.0% | |
| ACCAGCTTACCATTTAGATA+AGG | - | chr5_4:15564232-15564251 | Msa0840010:intron | 35.0% | |
| CCAGCTTACCATTTAGATAA+GGG | - | chr5_4:15564233-15564252 | Msa0840010:intron | 35.0% | |
| ! | TTAGATAAGGGATTTGGAAC+AGG | - | chr5_4:15564245-15564264 | Msa0840010:intron | 35.0% |
| TTGGAACAGGAATTAACAGT+TGG | - | chr5_4:15564258-15564277 | Msa0840010:intron | 35.0% | |
| ! | CAGTTGGTTAGTTCAATTTG+AGG | - | chr5_4:15564274-15564293 | Msa0840010:intron | 35.0% |
| ! | TTGATGGCAATCTGTAGAAA+AGG | + | chr5_4:15564305-15564324 | None:intergenic | 35.0% |
| ! | TTTCAATTTTGTTAGGGAGG+GGG | - | chr5_4:15564391-15564410 | Msa0840010:intron | 35.0% |
| GTTAGGTTCATCTAAGCAAA+TGG | - | chr5_4:15564459-15564478 | Msa0840010:intron | 35.0% | |
| ! | GCTAATCAAATTGCCTTTTC+AGG | - | chr5_4:15564481-15564500 | Msa0840010:intron | 35.0% |
| CTACAATTGGAACAGAATCA+AGG | - | chr5_4:15564618-15564637 | Msa0840010:intron | 35.0% | |
| TTTCATCTGAAAAGAAGAGG+GGG | + | chr5_4:15564738-15564757 | None:intergenic | 35.0% | |
| ! | TTACGCGTTGATAAAGTAAC+CGG | + | chr5_4:15565062-15565081 | None:intergenic | 35.0% |
| TTTGGGAAATGATCAGAGTT+AGG | + | chr5_4:15565248-15565267 | None:intergenic | 35.0% | |
| GCCCTATTAGAAAGAAAAGA+CGG | + | chr5_4:15565370-15565389 | None:intergenic | 35.0% | |
| AAAGCCTGAAAATCAAGTCA+TGG | + | chr5_4:15565937-15565956 | None:intergenic | 35.0% | |
| AGAGTCTATGAACATTCCTT+TGG | + | chr5_4:15566006-15566025 | None:intergenic | 35.0% | |
| ATGTTCCTTGCATTTCAGTT+TGG | + | chr5_4:15566043-15566062 | None:intergenic | 35.0% | |
| AAACTGAAATGCAAGGAACA+TGG | - | chr5_4:15566042-15566061 | Msa0840010:intron | 35.0% | |
| GGTAAGGACAATCTATCTTA+TGG | + | chr5_4:15566362-15566381 | None:intergenic | 35.0% | |
| ! | TTTTACAACTCGGATTGCAA+GGG | + | chr5_4:15566383-15566402 | None:intergenic | 35.0% |
| ! | TTTTTACAACTCGGATTGCA+AGG | + | chr5_4:15566384-15566403 | None:intergenic | 35.0% |
| ! | AAAACGCGGTTTTTACAACT+CGG | + | chr5_4:15566393-15566412 | None:intergenic | 35.0% |
| TTTCTTGTGGTTCAAAAACG+CGG | + | chr5_4:15566407-15566426 | None:intergenic | 35.0% | |
| TAGAAAAATGACACCACCAA+AGG | - | chr5_4:15566753-15566772 | Msa0840010:intron | 35.0% | |
| !! | CTCACCTTGTTTGATAGTTT+TGG | + | chr5_4:15566816-15566835 | None:intergenic | 35.0% |
| GTTCGTCTCTCAACTAAAAA+TGG | + | chr5_4:15567153-15567172 | None:intergenic | 35.0% | |
| TCTAAAGGATTGAAACGAGA+TGG | - | chr5_4:15567242-15567261 | Msa0840010:intron | 35.0% | |
| CTAAAGGATTGAAACGAGAT+GGG | - | chr5_4:15567243-15567262 | Msa0840010:intron | 35.0% | |
| TTTATCCCTCAAAATGGCAA+AGG | - | chr5_4:15567496-15567515 | Msa0840010:intron | 35.0% | |
| !!! | CTTTTCCTTTGCCATTTTGA+GGG | + | chr5_4:15567504-15567523 | None:intergenic | 35.0% |
| !!! | ACTTTTCCTTTGCCATTTTG+AGG | + | chr5_4:15567505-15567524 | None:intergenic | 35.0% |
| !!! | TGGTTTTGTTAATGTACTCG+TGG | + | chr5_4:15567848-15567867 | None:intergenic | 35.0% |
| !!! | CTTTTGAAATTGAAGTGCTC+AGG | + | chr5_4:15567993-15568012 | None:intergenic | 35.0% |
| TAGTTCAGACTCAGAAAATC+CGG | - | chr5_4:15568091-15568110 | Msa0840010:three_prime_UTR | 35.0% | |
| !!! | GTTTTGGGAGCTTATTAAAG+TGG | - | chr5_4:15568148-15568167 | Msa0840010:CDS | 35.0% |
| !! | AAAAGTTTTGGCGAATAGGT+TGG | - | chr5_4:15568328-15568347 | Msa0840010:intron | 35.0% |
| TGCAAATGAGATAGTGAATG+AGG | - | chr5_4:15568430-15568449 | Msa0840010:intron | 35.0% | |
| ! | ATGTTTAAAGTGAGTTTCGG+AGG | - | chr5_4:15568479-15568498 | Msa0840010:CDS | 35.0% |
| GAGTTATCTGGATTATGTCA+TGG | - | chr5_4:15568526-15568545 | Msa0840010:CDS | 35.0% | |
| ! | CCTATAGAGGAATTTGAGAT+CGG | - | chr5_4:15568635-15568654 | Msa0840010:intron | 35.0% |
| AGGAAAAGAAATGGTGACAA+TGG | + | chr5_4:15568683-15568702 | None:intergenic | 35.0% | |
| !! | TAATTTGATGACGAGGAAGA+TGG | - | chr5_4:15568721-15568740 | Msa0840010:CDS | 35.0% |
| GGCATAAAAGCAATCCTTTA+TGG | - | chr5_4:15568860-15568879 | Msa0840010:intron | 35.0% | |
| GATATATTTATCCCAACCAG+CGG | + | chr5_4:15568929-15568948 | None:intergenic | 35.0% | |
| GGATAAATATATCTCCTACC+TGG | - | chr5_4:15568936-15568955 | Msa0840010:intron | 35.0% | |
| GGCAATCCAAGATATGTAAA+AGG | + | chr5_4:15569007-15569026 | None:intergenic | 35.0% | |
| ACATATCTTGGATTGCCAAT+AGG | - | chr5_4:15569010-15569029 | Msa0840010:intron | 35.0% | |
| CATATCTTGGATTGCCAATA+GGG | - | chr5_4:15569011-15569030 | Msa0840010:intron | 35.0% | |
| ATATCTTGGATTGCCAATAG+GGG | - | chr5_4:15569012-15569031 | Msa0840010:intron | 35.0% | |
| ! | TTTCTTGGATTTTCCCCTAT+TGG | + | chr5_4:15569028-15569047 | None:intergenic | 35.0% |
| ATCCAAGAAAAAGTTCAACG+TGG | - | chr5_4:15569038-15569057 | Msa0840010:intron | 35.0% | |
| ! | ATTTCTCAAGGCATCTAACA+CGG | + | chr5_4:15569068-15569087 | None:intergenic | 35.0% |
| TGTTAGATGCCTTGAGAAAT+AGG | - | chr5_4:15569068-15569087 | Msa0840010:intron | 35.0% | |
| ! | ATGTGACAACCTATTTCTCA+AGG | + | chr5_4:15569080-15569099 | None:intergenic | 35.0% |
| TGAGAAATAGGTTGTCACAT+TGG | - | chr5_4:15569080-15569099 | Msa0840010:intron | 35.0% | |
| AAGAATAAACTCCTTTCCGT+TGG | - | chr5_4:15569103-15569122 | Msa0840010:intron | 35.0% | |
| AGATTAGAGATGATACCTGA+CGG | + | chr5_4:15569195-15569214 | None:intergenic | 35.0% | |
| GGTTTGTCTGACAAAATAAG+AGG | - | chr5_4:15569288-15569307 | Msa0840010:intron | 35.0% | |
| GACTTGGAGTTAAAACTTGA+GGG | - | chr5_4:15569314-15569333 | Msa0840010:intron | 35.0% | |
| AGAAAAATATCAGGGACCAA+GGG | - | chr5_4:15569372-15569391 | Msa0840010:intron | 35.0% | |
| ACATTAGAGGAAGTTCATCA+TGG | - | chr5_4:15569452-15569471 | Msa0840010:intron | 35.0% | |
| CATTAGAGGAAGTTCATCAT+GGG | - | chr5_4:15569453-15569472 | Msa0840010:intron | 35.0% | |
| ATTAGAGGAAGTTCATCATG+GGG | - | chr5_4:15569454-15569473 | Msa0840010:intron | 35.0% | |
| TGGAACAATTATTGGAGTGA+TGG | - | chr5_4:15569580-15569599 | Msa0840010:CDS | 35.0% | |
| GGAACAATTATTGGAGTGAT+GGG | - | chr5_4:15569581-15569600 | Msa0840010:CDS | 35.0% | |
| GAACAATTATTGGAGTGATG+GGG | - | chr5_4:15569582-15569601 | Msa0840010:CDS | 35.0% | |
| AACAATTATTGGAGTGATGG+GGG | - | chr5_4:15569583-15569602 | Msa0840010:CDS | 35.0% | |
| ACTTGATAAATCGAGCTAGT+TGG | - | chr5_4:15569635-15569654 | Msa0840010:intron | 35.0% | |
| CTTGATAAATCGAGCTAGTT+GGG | - | chr5_4:15569636-15569655 | Msa0840010:intron | 35.0% | |
| TTGATAAATCGAGCTAGTTG+GGG | - | chr5_4:15569637-15569656 | Msa0840010:intron | 35.0% | |
| ! | GAAGTAAATATAGTGGTGGA+GGG | - | chr5_4:15569660-15569679 | Msa0840010:intron | 35.0% |
| ! | GTTGATGGAGATAACAGAAA+AGG | - | chr5_4:15569749-15569768 | Msa0840010:CDS | 35.0% |
| AACAGAAAAGGTGGAGTTAA+AGG | - | chr5_4:15569761-15569780 | Msa0840010:intron | 35.0% | |
| TCAAAACAAAGTTGCTACAG+AGG | - | chr5_4:15569949-15569968 | Msa0840010:intron | 35.0% | |
| GAGGACAATTTAAGTAAGAG+AGG | - | chr5_4:15569968-15569987 | Msa0840010:intron | 35.0% | |
| GTCAAAACATTGTATTCTGC+TGG | - | chr5_4:15569999-15570018 | Msa0840010:intron | 35.0% | |
| TGCACTATTTGATGGAATAG+TGG | - | chr5_4:15570024-15570043 | Msa0840010:CDS | 35.0% | |
| ACTATTTGATGGAATAGTGG+AGG | - | chr5_4:15570027-15570046 | Msa0840010:CDS | 35.0% | |
| GAGGAAGAACATTAATTGTG+GGG | - | chr5_4:15570053-15570072 | Msa0840010:CDS | 35.0% | |
| ATTAATTGTGGGGATAGTAG+AGG | - | chr5_4:15570063-15570082 | Msa0840010:CDS | 35.0% | |
| CTGTCATTATTTGTTTGCGT+TGG | - | chr5_4:15570209-15570228 | Msa0840010:intron | 35.0% | |
| TTATTTGTTTGCGTTGGAAG+TGG | - | chr5_4:15570215-15570234 | Msa0840010:intron | 35.0% | |
| TATTTGTTTGCGTTGGAAGT+GGG | - | chr5_4:15570216-15570235 | Msa0840010:intron | 35.0% | |
| TGGAAGTGGGAAAATTGTTA+AGG | - | chr5_4:15570229-15570248 | Msa0840010:intron | 35.0% | |
| GGAAGTGGGAAAATTGTTAA+GGG | - | chr5_4:15570230-15570249 | Msa0840010:intron | 35.0% | |
| GAAGTGGGAAAATTGTTAAG+GGG | - | chr5_4:15570231-15570250 | Msa0840010:intron | 35.0% | |
| AACCACACCTAAAAAGATCT+TGG | - | chr5_4:15570472-15570491 | Msa0840010:intron | 35.0% | |
| ! | TCAGTCACCAAGATCTTTTT+AGG | + | chr5_4:15570482-15570501 | None:intergenic | 35.0% |
| TAATTCCTTATCAGGCACAA+TGG | - | chr5_4:15570586-15570605 | Msa0840010:intron | 35.0% | |
| !! | GCAAATGATTGGCTTTCATA+TGG | - | chr5_4:15570716-15570735 | Msa0840010:intron | 35.0% |
| ATATGGTTCTTGCTTCTTGT+AGG | - | chr5_4:15570733-15570752 | Msa0840010:CDS | 35.0% | |
| ATCATACTTGTATGGCGAAA+TGG | + | chr5_4:15570802-15570821 | None:intergenic | 35.0% | |
| !! | ACTATTAGCCTTGAAAAGTG+AGG | + | chr5_4:15570886-15570905 | None:intergenic | 35.0% |
| AGGCTAATAGTATCTCACTT+AGG | - | chr5_4:15570895-15570914 | Msa0840010:intron | 35.0% | |
| GGCTAATAGTATCTCACTTA+GGG | - | chr5_4:15570896-15570915 | Msa0840010:intron | 35.0% | |
| AAGTACTTGTGAGACTGTTT+AGG | - | chr5_4:15570958-15570977 | Msa0840010:intron | 35.0% | |
| TAACAATGAAGCTCTCTTTC+TGG | + | chr5_4:15571468-15571487 | None:intergenic | 35.0% | |
| AGAAAGAGAGCTTCATTGTT+AGG | - | chr5_4:15571467-15571486 | Msa0840010:five_prime_UTR | 35.0% | |
| TCACATGTCAAAACCTGAAA+CGG | - | chr5_4:15571528-15571547 | Msa0840010:five_prime_UTR | 35.0% | |
| ! | TTCAAGTTATACACCGTTTC+AGG | + | chr5_4:15571544-15571563 | None:intergenic | 35.0% |
| TATATTGCACCTATACCAGT+AGG | + | chr5_4:15571606-15571625 | None:intergenic | 35.0% | |
| TTGATGAAGAAAGTGAGTGG+TGG | + | chr5_4:15562968-15562987 | None:intergenic | 40.0% | |
| !! | TGGTTGATGAAGAAAGTGAG+TGG | + | chr5_4:15562971-15562990 | None:intergenic | 40.0% |
| TCAGGTACACTTTCTTTGTG+GGG | - | chr5_4:15563121-15563140 | Msa0840010:three_prime_UTR | 40.0% | |
| !! | TGCATTTGGGTTAGCTTGAT+TGG | - | chr5_4:15563312-15563331 | Msa0840010:intron | 40.0% |
| ! | GTGAATAGCCTTAATAGGGA+GGG | + | chr5_4:15563620-15563639 | None:intergenic | 40.0% |
| ! | AGTGAATAGCCTTAATAGGG+AGG | + | chr5_4:15563621-15563640 | None:intergenic | 40.0% |
| ! | GGCTAGTGAATAGCCTTAAT+AGG | + | chr5_4:15563625-15563644 | None:intergenic | 40.0% |
| GAGTTTCCCTTTGTAACTCA+AGG | + | chr5_4:15563653-15563672 | None:intergenic | 40.0% | |
| GCACTCTTGAGTAAAGTGAT+TGG | + | chr5_4:15563801-15563820 | None:intergenic | 40.0% | |
| ! | TTTTCGTAAGCTTTCCCGAA+GGG | - | chr5_4:15563994-15564013 | Msa0840010:intron | 40.0% |
| AGTATTTCCATTAGCCCTTC+GGG | + | chr5_4:15564011-15564030 | None:intergenic | 40.0% | |
| GAGTATTTCCATTAGCCCTT+CGG | + | chr5_4:15564012-15564031 | None:intergenic | 40.0% | |
| CCCTTATCTAAATGGTAAGC+TGG | + | chr5_4:15564236-15564255 | None:intergenic | 40.0% | |
| AACAGGAGACAGTTTAATCC+AGG | - | chr5_4:15564514-15564533 | Msa0840010:intron | 40.0% | |
| GTAACTAAGTTGCACTTCAG+AGG | - | chr5_4:15564787-15564806 | Msa0840010:intron | 40.0% | |
| TGCAGTTATGGAAGATTTGC+TGG | - | chr5_4:15564825-15564844 | Msa0840010:intron | 40.0% | |
| !! | TATGGAAGATTTGCTGGCAA+AGG | - | chr5_4:15564831-15564850 | Msa0840010:intron | 40.0% |
| !! | ATGGAAGATTTGCTGGCAAA+GGG | - | chr5_4:15564832-15564851 | Msa0840010:intron | 40.0% |
| CCTGTTGTAGTTACAAGTTC+TGG | + | chr5_4:15564934-15564953 | None:intergenic | 40.0% | |
| CCAGAACTTGTAACTACAAC+AGG | - | chr5_4:15564931-15564950 | Msa0840010:intron | 40.0% | |
| CTACAACAGGCTATTATCTC+AGG | - | chr5_4:15564944-15564963 | Msa0840010:intron | 40.0% | |
| ATTATCTCAGGATGTTCAGC+TGG | - | chr5_4:15564956-15564975 | Msa0840010:intron | 40.0% | |
| ! | CATTTCACTTTAGCTCCTCT+TGG | + | chr5_4:15565028-15565047 | None:intergenic | 40.0% |
| GTTAACAGAAGGGATGTATC+TGG | - | chr5_4:15565168-15565187 | Msa0840010:intron | 40.0% | |
| AGTCTTGAAGTGCATGATCT+AGG | + | chr5_4:15565408-15565427 | None:intergenic | 40.0% | |
| ACCAATCTTCCTTGTGAATG+CGG | - | chr5_4:15565572-15565591 | Msa0840010:intron | 40.0% | |
| GTGCAATTTCTTGAGGATCA+GGG | + | chr5_4:15565716-15565735 | None:intergenic | 40.0% | |
| AGTGCAATTTCTTGAGGATC+AGG | + | chr5_4:15565717-15565736 | None:intergenic | 40.0% | |
| CAAAGCAGTGCAATTTCTTG+AGG | + | chr5_4:15565723-15565742 | None:intergenic | 40.0% | |
| GTAGGAAACTCTACATCCAA+AGG | - | chr5_4:15565987-15566006 | Msa0840010:intron | 40.0% | |
| TAGTAGTGACTCTCCATCAT+TGG | - | chr5_4:15566067-15566086 | Msa0840010:intron | 40.0% | |
| CTGCAGAGTCTTTAGATTCA+AGG | - | chr5_4:15566142-15566161 | Msa0840010:intron | 40.0% | |
| CCAAATGTACCTAGATCCAA+CGG | - | chr5_4:15566174-15566193 | Msa0840010:intron | 40.0% | |
| TTTGAACCACAAGAAAACCC+AGG | - | chr5_4:15566411-15566430 | Msa0840010:intron | 40.0% | |
| ! | TATACTCCTGGGTTTTCTTG+TGG | + | chr5_4:15566420-15566439 | None:intergenic | 40.0% |
| ! | GGCCATATTTGGAATCAAAC+TGG | + | chr5_4:15566987-15567006 | None:intergenic | 40.0% |
| TATCCAATCCAAGTTCTTCC+CGG | - | chr5_4:15567018-15567037 | Msa0840010:intron | 40.0% | |
| CATAAATTCCGGGAAGAACT+TGG | + | chr5_4:15567029-15567048 | None:intergenic | 40.0% | |
| CATTCTGATGAAGGTGACTT+CGG | + | chr5_4:15567715-15567734 | None:intergenic | 40.0% | |
| ! | ACAGAAAACGAGTTTGGTGA+TGG | + | chr5_4:15567751-15567770 | None:intergenic | 40.0% |
| CTTTGCACAGAAAACGAGTT+TGG | + | chr5_4:15567757-15567776 | None:intergenic | 40.0% | |
| GTGCAAAGCAAGATAGCTAT+TGG | - | chr5_4:15567769-15567788 | Msa0840010:three_prime_UTR | 40.0% | |
| !! | TTCATGAAGCCATTTTGCTC+TGG | + | chr5_4:15567802-15567821 | None:intergenic | 40.0% |
| TGTTAATGTACTCGTGGAAG+TGG | + | chr5_4:15567842-15567861 | None:intergenic | 40.0% | |
| !! | CTCTGTTTCTGTGAATCTCT+GGG | + | chr5_4:15567893-15567912 | None:intergenic | 40.0% |
| !! | ACTCTGTTTCTGTGAATCTC+TGG | + | chr5_4:15567894-15567913 | None:intergenic | 40.0% |
| ATTCACAGAAACAGAGTAGC+AGG | - | chr5_4:15567897-15567916 | Msa0840010:three_prime_UTR | 40.0% | |
| ! | TAGCGAGAAATTGGGTTTTG+AGG | + | chr5_4:15567944-15567963 | None:intergenic | 40.0% |
| AAAACCCAATTTCTCGCTAG+AGG | - | chr5_4:15567945-15567964 | Msa0840010:three_prime_UTR | 40.0% | |
| TTCTCCTCTAGCGAGAAATT+GGG | + | chr5_4:15567952-15567971 | None:intergenic | 40.0% | |
| AGTTCAGACTCAGAAAATCC+GGG | - | chr5_4:15568092-15568111 | Msa0840010:three_prime_UTR | 40.0% | |
| AAATTAACTCCATCAGGACC+CGG | + | chr5_4:15568113-15568132 | None:intergenic | 40.0% | |
| AACGCGAAATTAACTCCATC+AGG | + | chr5_4:15568119-15568138 | None:intergenic | 40.0% | |
| !! | TCGCGTTTGTTAAGGAGTTT+TGG | - | chr5_4:15568132-15568151 | Msa0840010:CDS | 40.0% |
| !! | CGCGTTTGTTAAGGAGTTTT+GGG | - | chr5_4:15568133-15568152 | Msa0840010:CDS | 40.0% |
| AGATAGTGAATGAGGCGAAA+AGG | - | chr5_4:15568438-15568457 | Msa0840010:intron | 40.0% | |
| TAAAGTGAGTTTCGGAGGAA+AGG | - | chr5_4:15568484-15568503 | Msa0840010:CDS | 40.0% | |
| TGAGATTTCATGCTAGATGG+AGG | - | chr5_4:15568555-15568574 | Msa0840010:CDS | 40.0% | |
| TATAGGACTACCGTTCCTTA+GGG | + | chr5_4:15568621-15568640 | None:intergenic | 40.0% | |
| CCGATCTCAAATTCCTCTAT+AGG | + | chr5_4:15568638-15568657 | None:intergenic | 40.0% | |
| ! | AGGAATTTGAGATCGGTTGT+GGG | - | chr5_4:15568642-15568661 | Msa0840010:intron | 40.0% |
| TTCTCAGGTTTCAGATTCGA+AGG | - | chr5_4:15568758-15568777 | Msa0840010:CDS | 40.0% | |
| TCTCAGGTTTCAGATTCGAA+GGG | - | chr5_4:15568759-15568778 | Msa0840010:CDS | 40.0% | |
| !! | CCAGCGGACTTTTGTAAAAA+TGG | + | chr5_4:15568913-15568932 | None:intergenic | 40.0% |
| !! | CCATTTTTACAAAAGTCCGC+TGG | - | chr5_4:15568910-15568929 | Msa0840010:intron | 40.0% |
| ! | TTTTACAAAAGTCCGCTGGT+TGG | - | chr5_4:15568914-15568933 | Msa0840010:intron | 40.0% |
| ! | TTTACAAAAGTCCGCTGGTT+GGG | - | chr5_4:15568915-15568934 | Msa0840010:intron | 40.0% |
| !! | TGCCACGTTGAACTTTTTCT+TGG | + | chr5_4:15569043-15569062 | None:intergenic | 40.0% |
| AATAAACTCCTTTCCGTTGG+AGG | - | chr5_4:15569106-15569125 | Msa0840010:intron | 40.0% | |
| TAGTCTACTTCGTCTCATCA+AGG | - | chr5_4:15569167-15569186 | Msa0840010:intron | 40.0% | |
| TGTCTGACAAAATAAGAGGG+AGG | - | chr5_4:15569292-15569311 | Msa0840010:intron | 40.0% | |
| ACAAAATAAGAGGGAGGACT+TGG | - | chr5_4:15569298-15569317 | Msa0840010:intron | 40.0% | |
| GGACTTGGAGTTAAAACTTG+AGG | - | chr5_4:15569313-15569332 | Msa0840010:intron | 40.0% | |
| GAGAAAAATATCAGGGACCA+AGG | - | chr5_4:15569371-15569390 | Msa0840010:intron | 40.0% | |
| GAAAAATATCAGGGACCAAG+GGG | - | chr5_4:15569373-15569392 | Msa0840010:intron | 40.0% | |
| TTAGAGGAAGTTCATCATGG+GGG | - | chr5_4:15569455-15569474 | Msa0840010:intron | 40.0% | |
| TGCGGGATTTCCAAAATCAA+TGG | - | chr5_4:15569506-15569525 | Msa0840010:CDS | 40.0% | |
| ! | ATGGTTTGGAGACTAGTGTT+TGG | - | chr5_4:15569560-15569579 | Msa0840010:CDS | 40.0% |
| TGATAAATCGAGCTAGTTGG+GGG | - | chr5_4:15569638-15569657 | Msa0840010:intron | 40.0% | |
| GTTGGGGGAAGTAAATATAG+TGG | - | chr5_4:15569653-15569672 | Msa0840010:intron | 40.0% | |
| GGAAGTAAATATAGTGGTGG+AGG | - | chr5_4:15569659-15569678 | Msa0840010:intron | 40.0% | |
| GATGGAGATAACAGAAAAGG+TGG | - | chr5_4:15569752-15569771 | Msa0840010:CDS | 40.0% | |
| AAGGTGGAGTTAAAGGTGAA+TGG | - | chr5_4:15569768-15569787 | Msa0840010:intron | 40.0% | |
| GAGTTAAAGGTGAATGGAGA+AGG | - | chr5_4:15569774-15569793 | Msa0840010:intron | 40.0% | |
| TGCAAAGCTCATGCATAGTT+TGG | + | chr5_4:15569884-15569903 | None:intergenic | 40.0% | |
| GCAAGCAATGAAACTTTGGA+AGG | + | chr5_4:15569917-15569936 | None:intergenic | 40.0% | |
| CCAAGCAAGCAATGAAACTT+TGG | + | chr5_4:15569921-15569940 | None:intergenic | 40.0% | |
| CCAAAGTTTCATTGCTTGCT+TGG | - | chr5_4:15569918-15569937 | Msa0840010:CDS | 40.0% | |
| AAGTTTCATTGCTTGCTTGG+AGG | - | chr5_4:15569921-15569940 | Msa0840010:CDS | 40.0% | |
| TGCTGGTATGCACTATTTGA+TGG | - | chr5_4:15570016-15570035 | Msa0840010:intron | 40.0% | |
| CTTTAAGTGTTAGGCAATGG+TGG | - | chr5_4:15570131-15570150 | Msa0840010:CDS | 40.0% | |
| TTAACATGTCCTGTGCTAGT+GGG | - | chr5_4:15570299-15570318 | Msa0840010:CDS | 40.0% | |
| CATCATACGCGTTTGTACTA+AGG | + | chr5_4:15570331-15570350 | None:intergenic | 40.0% | |
| !! | GTTCATGAAGACTTGTTGCA+TGG | + | chr5_4:15570376-15570395 | None:intergenic | 40.0% |
| !!! | CACCAAGATCTTTTTAGGTG+TGG | + | chr5_4:15570477-15570496 | None:intergenic | 40.0% |
| TCAATCCATTGTGCCTGATA+AGG | + | chr5_4:15570594-15570613 | None:intergenic | 40.0% | |
| ! | GAGCTTTTGTGCATTAGAAC+CGG | - | chr5_4:15570612-15570631 | Msa0840010:intron | 40.0% |
| ! | TTTTGTGCATTAGAACCGGT+TGG | - | chr5_4:15570616-15570635 | Msa0840010:intron | 40.0% |
| CAATGTTTGTAGAAGCCAAC+CGG | + | chr5_4:15570634-15570653 | None:intergenic | 40.0% | |
| !!! | TTTGCTGATTTTGACCCAAC+CGG | - | chr5_4:15570775-15570794 | Msa0840010:CDS | 40.0% |
| ! | TTTTGCGATTCTAGCGAACA+TGG | - | chr5_4:15571040-15571059 | Msa0840010:intron | 40.0% |
| TGGTTGCTCATACTTTAGCT+AGG | - | chr5_4:15571060-15571079 | Msa0840010:intron | 40.0% | |
| GGTTGCTCATACTTTAGCTA+GGG | - | chr5_4:15571061-15571080 | Msa0840010:intron | 40.0% | |
| AATGCTGTCTGCTAAACCTT+AGG | - | chr5_4:15571274-15571293 | Msa0840010:five_prime_UTR | 40.0% | |
| GCTAAGAAGCTTACACTGAT+TGG | + | chr5_4:15571494-15571513 | None:intergenic | 40.0% | |
| GGTGTATAACTTGAAACGGA+TGG | - | chr5_4:15571549-15571568 | Msa0840010:five_prime_UTR | 40.0% | |
| GTATAACTTGAAACGGATGG+TGG | - | chr5_4:15571552-15571571 | Msa0840010:five_prime_UTR | 40.0% | |
| CGTATGGTTTCTGTGACTGT+CGG | - | chr5_4:15562860-15562879 | Msa0840010:three_prime_UTR | 45.0% | |
| !! | TTTCTGTGACTGTCGGTTCT+TGG | - | chr5_4:15562867-15562886 | Msa0840010:three_prime_UTR | 45.0% |
| !! | TTCTGTGACTGTCGGTTCTT+GGG | - | chr5_4:15562868-15562887 | Msa0840010:three_prime_UTR | 45.0% |
| !! | GAAGTTTGTTGAGGTGAGTG+TGG | + | chr5_4:15563098-15563117 | None:intergenic | 45.0% |
| ! | CTCAAGAGTGCGGTATCAAA+AGG | - | chr5_4:15563810-15563829 | Msa0840010:intron | 45.0% |
| TCGGGAAAGCTTACGAAAAC+AGG | + | chr5_4:15563993-15564012 | None:intergenic | 45.0% | |
| ! | GTTTTCGTAAGCTTTCCCGA+AGG | - | chr5_4:15563993-15564012 | Msa0840010:intron | 45.0% |
| ! | AATTTTGTTAGGGAGGGGGA+TGG | - | chr5_4:15564395-15564414 | Msa0840010:intron | 45.0% |
| ! | TGTGACGGTTCGTCTTTTAC+CGG | - | chr5_4:15564649-15564668 | Msa0840010:intron | 45.0% |
| ! | TTCGTCTTTTACCGGTGATG+TGG | - | chr5_4:15564657-15564676 | Msa0840010:intron | 45.0% |
| ATTGACTGCTTCCACATCAC+CGG | + | chr5_4:15564671-15564690 | None:intergenic | 45.0% | |
| ! | TTCCGAGCTCTTTTACCAAG+AGG | - | chr5_4:15565010-15565029 | Msa0840010:intron | 45.0% |
| CTCCTCTTGGTAAAAGAGCT+CGG | + | chr5_4:15565015-15565034 | None:intergenic | 45.0% | |
| TAAAGTAACCGGCATCTGAG+AGG | + | chr5_4:15565051-15565070 | None:intergenic | 45.0% | |
| !! | TTAAGGGCATTGACTGCTGT+AGG | - | chr5_4:15565969-15565988 | Msa0840010:intron | 45.0% |
| CACTGCCAAACTGAAATGCA+AGG | - | chr5_4:15566035-15566054 | Msa0840010:intron | 45.0% | |
| GCAGCCGTGGAAAAAGATTA+CGG | + | chr5_4:15566126-15566145 | None:intergenic | 45.0% | |
| CCGTTGGATCTAGGTACATT+TGG | + | chr5_4:15566177-15566196 | None:intergenic | 45.0% | |
| TATGCTTGGATTCTTTGCCG+CGG | + | chr5_4:15566208-15566227 | None:intergenic | 45.0% | |
| TTGCAAAAGCTGTAGCAGAC+TGG | - | chr5_4:15566316-15566335 | Msa0840010:intron | 45.0% | |
| AGCACACAAGTTTAGTGCAG+TGG | + | chr5_4:15566601-15566620 | None:intergenic | 45.0% | |
| ACTGCACTAAACTTGTGTGC+TGG | - | chr5_4:15566600-15566619 | Msa0840010:intron | 45.0% | |
| CTGCACTAAACTTGTGTGCT+GGG | - | chr5_4:15566601-15566620 | Msa0840010:intron | 45.0% | |
| AGCTGATGAAGTTCCTTTGG+TGG | + | chr5_4:15566769-15566788 | None:intergenic | 45.0% | |
| TGCAGCTGATGAAGTTCCTT+TGG | + | chr5_4:15566772-15566791 | None:intergenic | 45.0% | |
| ATTCCGGGAAGAACTTGGAT+TGG | + | chr5_4:15567024-15567043 | None:intergenic | 45.0% | |
| TCGGTTTACATTGAATGCCG+CGG | + | chr5_4:15567696-15567715 | None:intergenic | 45.0% | |
| !! | AGTTTGGTGATGGAGGTAAG+CGG | + | chr5_4:15567741-15567760 | None:intergenic | 45.0% |
| !! | GAAAACGAGTTTGGTGATGG+AGG | + | chr5_4:15567748-15567767 | None:intergenic | 45.0% |
| GGCAGAAAACCAGAGCAAAA+TGG | - | chr5_4:15567790-15567809 | Msa0840010:three_prime_UTR | 45.0% | |
| TGTACTCGTGGAAGTGGTTA+GGG | + | chr5_4:15567836-15567855 | None:intergenic | 45.0% | |
| ATGTACTCGTGGAAGTGGTT+AGG | + | chr5_4:15567837-15567856 | None:intergenic | 45.0% | |
| CTTCTCCTCTAGCGAGAAAT+TGG | + | chr5_4:15567953-15567972 | None:intergenic | 45.0% | |
| !! | GATACGTTGTTTCTCCGAAG+AGG | - | chr5_4:15568040-15568059 | Msa0840010:three_prime_UTR | 45.0% |
| GGATTTCTTGAGGGTAGTGA+TGG | - | chr5_4:15568169-15568188 | Msa0840010:CDS | 45.0% | |
| GAACCTCAGTCTGTCATTGT+AGG | - | chr5_4:15568377-15568396 | Msa0840010:intron | 45.0% | |
| CTCAGTCTGTCATTGTAGGT+GGG | - | chr5_4:15568381-15568400 | Msa0840010:intron | 45.0% | |
| TTCATGCTAGATGGAGGCAA+TGG | - | chr5_4:15568561-15568580 | Msa0840010:CDS | 45.0% | |
| AGAATGTTTGAAGGCTGCCT+CGG | - | chr5_4:15568589-15568608 | Msa0840010:intron | 45.0% | |
| CTATAGGACTACCGTTCCTT+AGG | + | chr5_4:15568622-15568641 | None:intergenic | 45.0% | |
| AAGGAACGGTAGTCCTATAG+AGG | - | chr5_4:15568622-15568641 | Msa0840010:intron | 45.0% | |
| ! | GAGGAATTTGAGATCGGTTG+TGG | - | chr5_4:15568641-15568660 | Msa0840010:intron | 45.0% |
| !! | TTTGATGACGAGGAAGATGG+TGG | - | chr5_4:15568724-15568743 | Msa0840010:CDS | 45.0% |
| TCGAGGCTGCATTGTGAAAT+TGG | - | chr5_4:15568974-15568993 | Msa0840010:CDS | 45.0% | |
| GCGTTCAATCTAGCACTACT+AGG | - | chr5_4:15569336-15569355 | Msa0840010:CDS | 45.0% | |
| GGGGGAAGTAAATATAGTGG+TGG | - | chr5_4:15569656-15569675 | Msa0840010:intron | 45.0% | |
| AGGTGAATGGAGAAGGTAAG+TGG | - | chr5_4:15569781-15569800 | Msa0840010:intron | 45.0% | |
| ATGGAGAAGGTAAGTGGTCT+TGG | - | chr5_4:15569787-15569806 | Msa0840010:intron | 45.0% | |
| TGGAGAAGGTAAGTGGTCTT+GGG | - | chr5_4:15569788-15569807 | Msa0840010:intron | 45.0% | |
| ! | GCTTGTAAGGTGCTTATGTC+AGG | - | chr5_4:15569846-15569865 | Msa0840010:intron | 45.0% |
| ! | GATGGAATAGTGGAGGAATG+AGG | - | chr5_4:15570034-15570053 | Msa0840010:CDS | 45.0% |
| TAAGTGTTAGGCAATGGTGG+AGG | - | chr5_4:15570134-15570153 | Msa0840010:intron | 45.0% | |
| CTTAACATGTCCTGTGCTAG+TGG | - | chr5_4:15570298-15570317 | Msa0840010:CDS | 45.0% | |
| AGGTTAATACCCACTAGCAC+AGG | + | chr5_4:15570311-15570330 | None:intergenic | 45.0% | |
| !! | CGGTTGGCTTCTACAAACAT+TGG | - | chr5_4:15570632-15570651 | Msa0840010:intron | 45.0% |
| ACTTGTATGGCGAAATGGTC+CGG | + | chr5_4:15570797-15570816 | None:intergenic | 45.0% | |
| TGCTCATACTTTAGCTAGGG+CGG | - | chr5_4:15571064-15571083 | Msa0840010:intron | 45.0% | |
| !!! | ATCATTTATTTTTATTTATA+GGG | + | chr5_4:15567298-15567317 | None:intergenic | 5.0% |
| ! | GTGAGTGGTGGAATGAGAAG+TGG | + | chr5_4:15562956-15562975 | None:intergenic | 50.0% |
| ! | GTTTGTACTGGCACTGCTGA+AGG | - | chr5_4:15563758-15563777 | Msa0840010:three_prime_UTR | 50.0% |
| AGTGCGGTATCAAAAGGAGC+CGG | - | chr5_4:15563816-15563835 | Msa0840010:intron | 50.0% | |
| GGTATCAAAAGGAGCCGGTT+AGG | - | chr5_4:15563821-15563840 | Msa0840010:intron | 50.0% | |
| AAGCTTTCCCGAAGGGCTAA+TGG | - | chr5_4:15564001-15564020 | Msa0840010:intron | 50.0% | |
| GCCTTTCTCGCAAGACGTAT+CGG | - | chr5_4:15564437-15564456 | Msa0840010:intron | 50.0% | |
| ACCGATACGTCTTGCGAGAA+AGG | + | chr5_4:15564441-15564460 | None:intergenic | 50.0% | |
| !! | TCTCGCAAGACGTATCGGTT+AGG | - | chr5_4:15564442-15564461 | Msa0840010:intron | 50.0% |
| ATCTCAGGATGTTCAGCTGG+TGG | - | chr5_4:15564959-15564978 | Msa0840010:intron | 50.0% | |
| TCTCAGGATGTTCAGCTGGT+GGG | - | chr5_4:15564960-15564979 | Msa0840010:intron | 50.0% | |
| GTGAAATGCCTCTCAGATGC+CGG | - | chr5_4:15565040-15565059 | Msa0840010:intron | 50.0% | |
| GCACTTCAAGACTCAGTCCA+AGG | - | chr5_4:15565415-15565434 | Msa0840010:intron | 50.0% | |
| TTCAAGACTCAGTCCAAGGC+TGG | - | chr5_4:15565419-15565438 | Msa0840010:intron | 50.0% | |
| GCTCACAAACTTACCAGCCT+TGG | + | chr5_4:15565435-15565454 | None:intergenic | 50.0% | |
| GCCGCATTCACAAGGAAGAT+TGG | + | chr5_4:15565576-15565595 | None:intergenic | 50.0% | |
| AGTCGTATGCCGCATTCACA+AGG | + | chr5_4:15565584-15565603 | None:intergenic | 50.0% | |
| TGAATGCGGCATACGACTCA+TGG | - | chr5_4:15565586-15565605 | Msa0840010:intron | 50.0% | |
| GGATCAGGGAAAAGCCATGT+TGG | + | chr5_4:15565702-15565721 | None:intergenic | 50.0% | |
| CTCTCCATCATTGGCCAAGA+CGG | - | chr5_4:15566076-15566095 | Msa0840010:intron | 50.0% | |
| CTTACCGTCTTGGCCAATGA+TGG | + | chr5_4:15566083-15566102 | None:intergenic | 50.0% | |
| AGTGTGGCTTCTTACCGTCT+TGG | + | chr5_4:15566093-15566112 | None:intergenic | 50.0% | |
| ATCTAAAGACTCTGCAGCCG+TGG | + | chr5_4:15566139-15566158 | None:intergenic | 50.0% | |
| CAACTCGGATTGCAAGGGTA+AGG | + | chr5_4:15566378-15566397 | None:intergenic | 50.0% | |
| CGAGATGGGATACAGAGAGT+CGG | - | chr5_4:15567257-15567276 | Msa0840010:intron | 50.0% | |
| GTTTACATTGAATGCCGCGG+CGG | + | chr5_4:15567693-15567712 | None:intergenic | 50.0% | |
| AAGCGGCGACATTCTGATGA+AGG | + | chr5_4:15567724-15567743 | None:intergenic | 50.0% | |
| AAGTGCTCAGGTACAGCTAC+AGG | + | chr5_4:15567981-15568000 | None:intergenic | 50.0% | |
| !! | ACGTTGTTTCTCCGAAGAGG+AGG | - | chr5_4:15568043-15568062 | Msa0840010:three_prime_UTR | 50.0% |
| CTCCGAAGAGGAGGTAAGAA+AGG | - | chr5_4:15568052-15568071 | Msa0840010:three_prime_UTR | 50.0% | |
| CGCCTTTCTTACCTCCTCTT+CGG | + | chr5_4:15568057-15568076 | None:intergenic | 50.0% | |
| CGAAGAGGAGGTAAGAAAGG+CGG | - | chr5_4:15568055-15568074 | Msa0840010:three_prime_UTR | 50.0% | |
| TCAGAAAATCCGGGTCCTGA+TGG | - | chr5_4:15568101-15568120 | Msa0840010:exon | 50.0% | |
| CCACCTACAATGACAGACTG+AGG | + | chr5_4:15568383-15568402 | None:intergenic | 50.0% | |
| CCTCAGTCTGTCATTGTAGG+TGG | - | chr5_4:15568380-15568399 | Msa0840010:intron | 50.0% | |
| CTGTCATTGTAGGTGGGAGA+CGG | - | chr5_4:15568387-15568406 | Msa0840010:intron | 50.0% | |
| TGTCATTGTAGGTGGGAGAC+GGG | - | chr5_4:15568388-15568407 | Msa0840010:intron | 50.0% | |
| GTGGAGTTGGAATCGTTCTC+AGG | - | chr5_4:15568743-15568762 | Msa0840010:CDS | 50.0% | |
| GATTACAACACGGCCTCCAA+CGG | + | chr5_4:15569122-15569141 | None:intergenic | 50.0% | |
| ! | CAGTTTTTATGGGGGGAGTG+AGG | - | chr5_4:15569231-15569250 | Msa0840010:intron | 50.0% |
| AACACTGTACCAAAGCCCCT+TGG | + | chr5_4:15569391-15569410 | None:intergenic | 50.0% | |
| CATGGGGGAAAGATGTCAGT+CGG | - | chr5_4:15569470-15569489 | Msa0840010:intron | 50.0% | |
| ATGGGGGAAAGATGTCAGTC+GGG | - | chr5_4:15569471-15569490 | Msa0840010:intron | 50.0% | |
| ATGTCAGTCGGGTGGACAAA+GGG | - | chr5_4:15569482-15569501 | Msa0840010:CDS | 50.0% | |
| ! | ATATAGTGGTGGAGGGTGTG+AGG | - | chr5_4:15569667-15569686 | Msa0840010:intron | 50.0% |
| ! | AGAAGGTAAGTGGTCTTGGG+TGG | - | chr5_4:15569791-15569810 | Msa0840010:intron | 50.0% |
| ! | TTAGGCAATGGTGGAGGCTA+GGG | - | chr5_4:15570140-15570159 | Msa0840010:intron | 50.0% |
| TATGGCGAAATGGTCCGGTT+GGG | + | chr5_4:15570792-15570811 | None:intergenic | 50.0% | |
| ! | ATGGTGACTAGCCCAAGAAC+AGG | + | chr5_4:15571090-15571109 | None:intergenic | 50.0% |
| ! | TTGAAACGGATGGTGGTGAC+TGG | - | chr5_4:15571559-15571578 | Msa0840010:five_prime_UTR | 50.0% |
| TGCGCAAAGCCTACTGGTAT+AGG | - | chr5_4:15571594-15571613 | Msa0840010:five_prime_UTR | 50.0% | |
| GCACTGCTGAAGGTAGAAGC+TGG | - | chr5_4:15563768-15563787 | Msa0840010:three_prime_UTR | 55.0% | |
| GATGGGATACAGAGAGTCGG+TGG | - | chr5_4:15567260-15567279 | Msa0840010:intron | 55.0% | |
| AGGAGGTAAGAAAGGCGGTC+TGG | - | chr5_4:15568060-15568079 | Msa0840010:three_prime_UTR | 55.0% | |
| GGAGGTAAGAAAGGCGGTCT+GGG | - | chr5_4:15568061-15568080 | Msa0840010:three_prime_UTR | 55.0% | |
| !! | TGTAGGTGGGAGACGGGTTT+TGG | - | chr5_4:15568394-15568413 | Msa0840010:intron | 55.0% |
| !!! | GTGGGAGACGGGTTTTGGAT+GGG | - | chr5_4:15568399-15568418 | Msa0840010:intron | 55.0% |
| !!! | TGGGAGACGGGTTTTGGATG+GGG | - | chr5_4:15568400-15568419 | Msa0840010:intron | 55.0% |
| TCGGTCTCAGCCCTAAGGAA+CGG | - | chr5_4:15568608-15568627 | Msa0840010:intron | 55.0% | |
| ! | CGGTTGTGGGTTAAGACGAG+AGG | - | chr5_4:15568655-15568674 | Msa0840010:intron | 55.0% |
| !! | GACGAGGAAGATGGTGGAGT+TGG | - | chr5_4:15568730-15568749 | Msa0840010:CDS | 55.0% |
| GCTGCATCTTCAAGCCAGGT+AGG | + | chr5_4:15568953-15568972 | None:intergenic | 55.0% | |
| CGAAGCTGCATCTTCAAGCC+AGG | + | chr5_4:15568957-15568976 | None:intergenic | 55.0% | |
| GGCTTGAAGATGCAGCTTCG+AGG | - | chr5_4:15568957-15568976 | Msa0840010:CDS | 55.0% | |
| ATGGGGGGAGTGAGGAAGTT+AGG | - | chr5_4:15569239-15569258 | Msa0840010:intron | 55.0% | |
| TATCAGGGACCAAGGGGCTT+TGG | - | chr5_4:15569379-15569398 | Msa0840010:intron | 55.0% | |
| GATGTCAGTCGGGTGGACAA+AGG | - | chr5_4:15569481-15569500 | Msa0840010:CDS | 55.0% | |
| TGTCAGTCGGGTGGACAAAG+GGG | - | chr5_4:15569483-15569502 | Msa0840010:CDS | 55.0% | |
| !! | AGGGTGTGAGGTGTTGGGAA+TGG | - | chr5_4:15569679-15569698 | Msa0840010:intron | 55.0% |
| !! | GTGTGAGGTGTTGGGAATGG+AGG | - | chr5_4:15569682-15569701 | Msa0840010:intron | 55.0% |
| !! | TGAGGTGTTGGGAATGGAGG+TGG | - | chr5_4:15569685-15569704 | Msa0840010:CDS | 55.0% |
| ! | GGTAAGTGGTCTTGGGTGGA+TGG | - | chr5_4:15569795-15569814 | Msa0840010:intron | 55.0% |
| ! | GTTAGGCAATGGTGGAGGCT+AGG | - | chr5_4:15570139-15570158 | Msa0840010:intron | 55.0% |
| ! | TAGGCAATGGTGGAGGCTAG+GGG | - | chr5_4:15570141-15570160 | Msa0840010:intron | 55.0% |
| GTATGGCGAAATGGTCCGGT+TGG | + | chr5_4:15570793-15570812 | None:intergenic | 55.0% | |
| GCAAAGTGCGCAAAGCCTAC+TGG | - | chr5_4:15571588-15571607 | Msa0840010:five_prime_UTR | 55.0% | |
| TGCGGCATACGACTCATGGC+AGG | - | chr5_4:15565590-15565609 | Msa0840010:intron | 60.0% | |
| CTGCTGATCCTCGTGGACAC+TGG | - | chr5_4:15565774-15565793 | Msa0840010:intron | 60.0% | |
| GCTGCAGAGCCGTTGGATCT+AGG | + | chr5_4:15566186-15566205 | None:intergenic | 60.0% | |
| GGGATACAGAGAGTCGGTGG+CGG | - | chr5_4:15567263-15567282 | Msa0840010:intron | 60.0% | |
| !!! | GGTGGGAGACGGGTTTTGGA+TGG | - | chr5_4:15568398-15568417 | Msa0840010:intron | 60.0% |
| GTTCCTTAGGGCTGAGACCG+AGG | + | chr5_4:15568609-15568628 | None:intergenic | 60.0% | |
| CAACACGGCCTCCAACGGAA+AGG | + | chr5_4:15569117-15569136 | None:intergenic | 60.0% | |
| CGTCTCATCAAGGCTCCGTC+AGG | - | chr5_4:15569177-15569196 | Msa0840010:intron | 60.0% | |
| GGGGAAAGATGTCAGTCGGG+TGG | - | chr5_4:15569474-15569493 | Msa0840010:intron | 60.0% | |
| ! | TGGTGGAGGGTGTGAGGTGT+TGG | - | chr5_4:15569673-15569692 | Msa0840010:intron | 60.0% |
| ! | GGTGGAGGGTGTGAGGTGTT+GGG | - | chr5_4:15569674-15569693 | Msa0840010:intron | 60.0% |
| ! | AGGCAATGGTGGAGGCTAGG+GGG | - | chr5_4:15570142-15570161 | Msa0840010:intron | 60.0% |
| GGTGGAGGCTAGGGGGATTA+AGG | - | chr5_4:15570149-15570168 | Msa0840010:intron | 60.0% | |
| TAGCTAGGGCGGCCTGTTCT+TGG | - | chr5_4:15571075-15571094 | Msa0840010:intron | 60.0% | |
| AGCTAGGGCGGCCTGTTCTT+GGG | - | chr5_4:15571076-15571095 | Msa0840010:intron | 60.0% | |
| CCACGAGGATCAGCAGCTCC+CGG | + | chr5_4:15565770-15565789 | None:intergenic | 65.0% | |
| CAGCTGTGCCAGTGTCCACG+AGG | + | chr5_4:15565785-15565804 | None:intergenic | 65.0% | |
| ATCCAACGGCTCTGCAGCCG+CGG | - | chr5_4:15566188-15566207 | Msa0840010:intron | 65.0% | |
| ! | CGGCGAGTGACGGAGGAGAT+CGG | + | chr5_4:15567673-15567692 | None:intergenic | 65.0% |
| CTGCCTCGGTCTCAGCCCTA+AGG | - | chr5_4:15568603-15568622 | Msa0840010:intron | 65.0% | |
| GTCGGGTGGACAAAGGGGTG+CGG | - | chr5_4:15569488-15569507 | Msa0840010:CDS | 65.0% | |
| ! | TCGGGTGGACAAAGGGGTGC+GGG | - | chr5_4:15569489-15569508 | Msa0840010:CDS | 65.0% |
| CCGGGAGCTGCTGATCCTCG+TGG | - | chr5_4:15565767-15565786 | Msa0840010:intron | 70.0% | |
| AATGCCGCGGCGGCGAGTGA+CGG | + | chr5_4:15567683-15567702 | None:intergenic | 70.0% | |
| TGCCGCGGCTGCAGAGCCGT+TGG | + | chr5_4:15566193-15566212 | None:intergenic | 75.0% | |
| TCCTCCGTCACTCGCCGCCG+CGG | - | chr5_4:15567676-15567695 | Msa0840010:intron | 75.0% | |
| ! | GCCGCGGCGGCGAGTGACGG+AGG | + | chr5_4:15567680-15567699 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 15562818 | 15571740 | 15562818 | ID=Msa0840010;Name=Msa0840010 |
| chr5_4 | mRNA | 15562818 | 15571740 | 15562818 | ID=Msa0840010-mRNA-1;Parent=Msa0840010;Name=Msa0840010-mRNA-1;_AED=0.16;_eAED=0.16;_QI=533|1|1|1|0.8|0.75|16|904|401 |
| chr5_4 | exon | 15562818 | 15563208 | 15562818 | ID=Msa0840010-mRNA-1:exon:6693;Parent=Msa0840010-mRNA-1 |
| chr5_4 | exon | 15563744 | 15563803 | 15563744 | ID=Msa0840010-mRNA-1:exon:6692;Parent=Msa0840010-mRNA-1 |
| chr5_4 | exon | 15563896 | 15563958 | 15563896 | ID=Msa0840010-mRNA-1:exon:6691;Parent=Msa0840010-mRNA-1 |
| chr5_4 | exon | 15567728 | 15568246 | 15567728 | ID=Msa0840010-mRNA-1:exon:6690;Parent=Msa0840010-mRNA-1 |
| chr5_4 | exon | 15568461 | 15568606 | 15568461 | ID=Msa0840010-mRNA-1:exon:6689;Parent=Msa0840010-mRNA-1 |
| chr5_4 | exon | 15568704 | 15568809 | 15568704 | ID=Msa0840010-mRNA-1:exon:6688;Parent=Msa0840010-mRNA-1 |
| chr5_4 | exon | 15568947 | 15569024 | 15568947 | ID=Msa0840010-mRNA-1:exon:6687;Parent=Msa0840010-mRNA-1 |
| chr5_4 | exon | 15569118 | 15569171 | 15569118 | ID=Msa0840010-mRNA-1:exon:6686;Parent=Msa0840010-mRNA-1 |
| chr5_4 | exon | 15569322 | 15569382 | 15569322 | ID=Msa0840010-mRNA-1:exon:6685;Parent=Msa0840010-mRNA-1 |
| chr5_4 | exon | 15569481 | 15569605 | 15569481 | ID=Msa0840010-mRNA-1:exon:6684;Parent=Msa0840010-mRNA-1 |
| chr5_4 | exon | 15569685 | 15569771 | 15569685 | ID=Msa0840010-mRNA-1:exon:6683;Parent=Msa0840010-mRNA-1 |
| chr5_4 | exon | 15569865 | 15569944 | 15569865 | ID=Msa0840010-mRNA-1:exon:6682;Parent=Msa0840010-mRNA-1 |
| chr5_4 | exon | 15570023 | 15570152 | 15570023 | ID=Msa0840010-mRNA-1:exon:6681;Parent=Msa0840010-mRNA-1 |
| chr5_4 | exon | 15570263 | 15570345 | 15570263 | ID=Msa0840010-mRNA-1:exon:6680;Parent=Msa0840010-mRNA-1 |
| chr5_4 | exon | 15570721 | 15570848 | 15570721 | ID=Msa0840010-mRNA-1:exon:6679;Parent=Msa0840010-mRNA-1 |
| chr5_4 | exon | 15571209 | 15571740 | 15571209 | ID=Msa0840010-mRNA-1:exon:6678;Parent=Msa0840010-mRNA-1 |
| chr5_4 | five_prime_UTR | 15571209 | 15571740 | 15571209 | ID=Msa0840010-mRNA-1:five_prime_utr;Parent=Msa0840010-mRNA-1 |
| chr5_4 | five_prime_UTR | 15570848 | 15570848 | 15570848 | ID=Msa0840010-mRNA-1:five_prime_utr;Parent=Msa0840010-mRNA-1 |
| chr5_4 | CDS | 15570721 | 15570847 | 15570721 | ID=Msa0840010-mRNA-1:cds;Parent=Msa0840010-mRNA-1 |
| chr5_4 | CDS | 15570263 | 15570345 | 15570263 | ID=Msa0840010-mRNA-1:cds;Parent=Msa0840010-mRNA-1 |
| chr5_4 | CDS | 15570023 | 15570152 | 15570023 | ID=Msa0840010-mRNA-1:cds;Parent=Msa0840010-mRNA-1 |
| chr5_4 | CDS | 15569865 | 15569944 | 15569865 | ID=Msa0840010-mRNA-1:cds;Parent=Msa0840010-mRNA-1 |
| chr5_4 | CDS | 15569685 | 15569771 | 15569685 | ID=Msa0840010-mRNA-1:cds;Parent=Msa0840010-mRNA-1 |
| chr5_4 | CDS | 15569481 | 15569605 | 15569481 | ID=Msa0840010-mRNA-1:cds;Parent=Msa0840010-mRNA-1 |
| chr5_4 | CDS | 15569322 | 15569382 | 15569322 | ID=Msa0840010-mRNA-1:cds;Parent=Msa0840010-mRNA-1 |
| chr5_4 | CDS | 15569118 | 15569171 | 15569118 | ID=Msa0840010-mRNA-1:cds;Parent=Msa0840010-mRNA-1 |
| chr5_4 | CDS | 15568947 | 15569024 | 15568947 | ID=Msa0840010-mRNA-1:cds;Parent=Msa0840010-mRNA-1 |
| chr5_4 | CDS | 15568704 | 15568809 | 15568704 | ID=Msa0840010-mRNA-1:cds;Parent=Msa0840010-mRNA-1 |
| chr5_4 | CDS | 15568461 | 15568606 | 15568461 | ID=Msa0840010-mRNA-1:cds;Parent=Msa0840010-mRNA-1 |
| chr5_4 | CDS | 15568118 | 15568246 | 15568118 | ID=Msa0840010-mRNA-1:cds;Parent=Msa0840010-mRNA-1 |
| chr5_4 | three_prime_UTR | 15567728 | 15568117 | 15567728 | ID=Msa0840010-mRNA-1:three_prime_utr;Parent=Msa0840010-mRNA-1 |
| chr5_4 | three_prime_UTR | 15563896 | 15563958 | 15563896 | ID=Msa0840010-mRNA-1:three_prime_utr;Parent=Msa0840010-mRNA-1 |
| chr5_4 | three_prime_UTR | 15563744 | 15563803 | 15563744 | ID=Msa0840010-mRNA-1:three_prime_utr;Parent=Msa0840010-mRNA-1 |
| chr5_4 | three_prime_UTR | 15562818 | 15563208 | 15562818 | ID=Msa0840010-mRNA-1:three_prime_utr;Parent=Msa0840010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
