AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0378620


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0378620 MtrunA17_Chr3g0137241 95.549 337 3 2 1 337 1 325 0.0 664
Msa0378620 MtrunA17_Chr1g0149651 63.613 393 84 8 1 337 1 390 7.71e-165 467
Msa0378620 MtrunA17_Chr2g0305101 62.987 308 73 6 31 337 42 309 8.33e-128 370
Msa0378620 MtrunA17_Chr4g0065241 78.281 221 40 3 119 337 71 285 1.17e-122 356
Msa0378620 MtrunA17_Chr5g0398181 64.889 225 67 3 119 337 28 246 1.49e-98 293
Msa0378620 MtrunA17_Chr1g0192791 30.736 231 113 8 119 337 20 215 4.75e-15 74.3
Msa0378620 MtrunA17_Chr2g0289201 25.455 220 133 4 119 337 118 307 4.11e-14 72.8
Msa0378620 MtrunA17_Chr1g0151961 28.054 221 129 7 119 337 120 312 1.96e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0378620 AT5G25220.1 61.893 391 77 12 1 337 1 373 6.34e-147 421
Msa0378620 AT5G25220.2 61.893 391 77 12 1 337 1 373 1.06e-146 421
Msa0378620 AT5G11060.1 64.850 367 69 12 1 337 1 337 3.13e-142 408
Msa0378620 AT4G32040.2 59.760 333 120 7 6 337 13 332 1.65e-130 378
Msa0378620 AT4G32040.1 59.760 333 120 7 6 337 13 332 1.68e-130 378
Msa0378620 AT1G62990.1 60.000 245 89 4 96 337 7 245 3.53e-98 292
Msa0378620 AT1G23380.1 29.956 227 114 9 119 337 86 275 1.15e-13 71.2
Msa0378620 AT1G70510.1 27.826 230 129 8 112 337 63 259 1.45e-13 70.9
Msa0378620 AT1G70510.2 26.522 230 136 7 112 337 63 263 3.92e-12 66.6
Msa0378620 AT1G23380.2 29.694 229 114 10 119 337 86 277 6.04e-12 66.2
Msa0378620 AT4G08150.1 29.258 229 119 9 119 337 135 330 2.25e-11 65.1
Msa0378620 AT1G62360.1 30.000 220 125 6 119 337 122 313 2.76e-11 64.7

Find 127 sgRNAs with CRISPR-Local

Find 254 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATAATAGTATGGGAGGATT+TGG 0.320582 3_1:+79463035 Msa0378620:CDS
TTATATGGAGTATCAATAAA+TGG 0.332298 3_1:-79460084 None:intergenic
TGCCAGCTGAGCGTCGATCC+TGG 0.345057 3_1:-79460682 None:intergenic
CGATGACTTCGCTGTGGTTT+CGG 0.353018 3_1:-79460482 None:intergenic
TGTACCTGTTAGACTTTGTA+AGG 0.355039 3_1:-79461662 None:intergenic
AAAGGAGATTGGACAGGAAA+TGG 0.358235 3_1:-79460057 None:intergenic
GTACTCTGCGTTAGGACAAC+AGG 0.363398 3_1:+79460728 Msa0378620:CDS
GGATGGTTCAGATAATAGTA+TGG 0.368115 3_1:+79463025 Msa0378620:CDS
GAAGTGATGAACAACTTATA+TGG 0.369983 3_1:-79460099 None:intergenic
CTTTCCAAACTGCACCTAAC+TGG 0.380352 3_1:+79460319 Msa0378620:CDS
GTTGTTGTTGTTCTGTGAAA+TGG 0.389827 3_1:-79460269 None:intergenic
CAGTCCTTACAAAGTCTAAC+AGG 0.396414 3_1:+79461658 Msa0378620:CDS
GAGCGTCGATCCTGGGCAAC+TGG 0.397329 3_1:-79460674 None:intergenic
TAAACAACTCGACCACTTCA+TGG 0.399427 3_1:+79460773 Msa0378620:CDS
GAGCCATTGACCGGAGGATT+GGG 0.403988 3_1:-79460442 None:intergenic
TGGTGTCGAGGTTGCGAAGA+AGG 0.418558 3_1:-79460353 None:intergenic
AGACGAGCTGGAAAACTTCC+TGG 0.420513 3_1:+79463414 Msa0378620:CDS
AGTGATGTTAATCTGTTTGA+TGG 0.421723 3_1:+79462996 Msa0378620:CDS
AGGGCGTTGTTGAGCCAGTT+AGG 0.423606 3_1:-79460333 None:intergenic
TGAGCCAGTTAGGTGCAGTT+TGG 0.424789 3_1:-79460323 None:intergenic
GGAAGCAGTAATGGCTTGTT+GGG 0.426655 3_1:+79461627 Msa0378620:CDS
GTTCCCAATCCTCCGGTCAA+TGG 0.427348 3_1:+79460439 Msa0378620:CDS
TATAGATAGCTATTGATTCA+TGG 0.428806 3_1:-79460212 None:intergenic
AATGGTGGAGTGGGTTGTCT+TGG 0.431285 3_1:-79460251 None:intergenic
TGGAAGCAGTAATGGCTTGT+TGG 0.435199 3_1:+79461626 Msa0378620:CDS
GAAACGCAAAGGTGAAATAA+TGG 0.435340 3_1:+79460584 Msa0378620:CDS
GGACAGGAAATGGAAAGAAT+AGG 0.436619 3_1:-79460047 None:intergenic
ATCCTGGGCAACTGGTCAAC+CGG 0.438877 3_1:-79460666 None:intergenic
GAAGTTGGTACTGTTGTTGT+TGG 0.439599 3_1:-79460397 None:intergenic
GCCCAGGATCGACGCTCAGC+TGG 0.442737 3_1:+79460680 Msa0378620:CDS
TAATCTGTTTGATGGAGGTT+TGG 0.446200 3_1:+79463004 Msa0378620:CDS
AGAGCCATTGACCGGAGGAT+TGG 0.446472 3_1:-79460443 None:intergenic
GCCAGCTGAGCGTCGATCCT+GGG 0.452139 3_1:-79460681 None:intergenic
GGTACTGTTGTTGTTGGTTG+TGG 0.453246 3_1:-79460391 None:intergenic
ATTAAAGCATGAGTTGAAAC+AGG 0.455099 3_1:+79463112 Msa0378620:CDS
ATAGAAGCTGTTCATACAAC+GGG 0.456842 3_1:-79460611 None:intergenic
CTTCGCTGTGGTTTCGGTGG+AGG 0.457682 3_1:-79460476 None:intergenic
TTGTCCTAACGCAGAGTACT+TGG 0.459203 3_1:-79460724 None:intergenic
GGGGAATAGAGAGAAAGAAA+TGG 0.460424 3_1:-79460185 None:intergenic
AACCGGCGGTGTCGAGGTTG+AGG 0.460908 3_1:-79460419 None:intergenic
CAGCGGAGGGAGTGATGAAC+TGG 0.464161 3_1:+79460553 Msa0378620:CDS
CGCCGGTTGACCAGTTGCCC+AGG 0.465203 3_1:+79460664 Msa0378620:CDS
CAACCTCAGTACTTAAAGAT+TGG 0.466078 3_1:+79463442 Msa0378620:CDS
GTTGTTGTTGGTTGTGGCGG+TGG 0.469972 3_1:-79460385 None:intergenic
CCATGCAATGGAAGCAGTAA+TGG 0.471444 3_1:+79461618 Msa0378620:CDS
GTTGCTCCTGTACCTTCCCC+TGG 0.471752 3_1:-79462942 None:intergenic
CTGTTTGATGGAGGTTTGGA+TGG 0.472583 3_1:+79463008 Msa0378620:CDS
TTTCAGATTCAAAACATACT+TGG 0.473595 3_1:+79463544 Msa0378620:three_prime_UTR
AAGCTATCTTAGATATCTTA+CGG 0.481300 3_1:+79463774 Msa0378620:three_prime_UTR
CTGTGGTTTCGGTGGAGGAC+AGG 0.484561 3_1:-79460471 None:intergenic
CATGGACTCGGACATGTTGT+TGG 0.486135 3_1:-79461600 None:intergenic
TAAATGGTTAGAAAGGAGAT+TGG 0.488612 3_1:-79460068 None:intergenic
AGAGTTCTTACAGTAGGATA+AGG 0.489180 3_1:-79463486 None:intergenic
CGTCACCGGCGCTGGTATGA+AGG 0.491895 3_1:+79460509 Msa0378620:CDS
GTTGCCAAGTACTCTGCGTT+AGG 0.491986 3_1:+79460720 Msa0378620:CDS
GTTTCACCAGGGGAAGGTAC+AGG 0.498577 3_1:+79462936 Msa0378620:CDS
ATCAATAGCTATCTATATCA+TGG 0.499720 3_1:+79460218 Msa0378620:exon
AGTACTGAGGTTGTGTCACC+AGG 0.501554 3_1:-79463432 None:intergenic
CCATTACTGCTTCCATTGCA+TGG 0.504180 3_1:-79461618 None:intergenic
AGGACGGGAGAGCCATTGAC+CGG 0.509843 3_1:-79460451 None:intergenic
GTTCTGTGAAATGGTGGAGT+GGG 0.511127 3_1:-79460260 None:intergenic
AAGCGGTGAGGCAACAGCGG+AGG 0.511964 3_1:+79460539 Msa0378620:CDS
GTTTCGGTGGAGGACAGGAC+GGG 0.513862 3_1:-79460466 None:intergenic
CTGCTTCCATTGCATGGACT+CGG 0.514678 3_1:-79461612 None:intergenic
TTGACCGGAGGATTGGGAAC+CGG 0.515320 3_1:-79460436 None:intergenic
TGTTGCCTCACCGCTTTCCT+CGG 0.515416 3_1:-79460532 None:intergenic
GTATCAATAAATGGTTAGAA+AGG 0.520381 3_1:-79460075 None:intergenic
TCATTCTCTGTTAGAACAAG+AGG 0.524064 3_1:-79463059 None:intergenic
GGTGTCGAGGTTGCGAAGAA+GGG 0.525959 3_1:-79460352 None:intergenic
GAAAATTGTGGACATAAGAG+AGG 0.527462 3_1:+79463377 Msa0378620:CDS
GGTGTCGAGGTTGAGGAAGT+TGG 0.532035 3_1:-79460412 None:intergenic
ATTGGGAACCGGCGGTGTCG+AGG 0.533014 3_1:-79460425 None:intergenic
AGCTATTGATTCATGGTGAA+GGG 0.536452 3_1:-79460205 None:intergenic
GATGGTTCAGATAATAGTAT+GGG 0.538925 3_1:+79463026 Msa0378620:CDS
CTCGGCCTTCATACCAGCGC+CGG 0.539817 3_1:-79460514 None:intergenic
GGTTTCGGTGGAGGACAGGA+CGG 0.540180 3_1:-79460467 None:intergenic
GTTGTTGTTCTGTGAAATGG+TGG 0.541053 3_1:-79460266 None:intergenic
GAGTGGTGAGGATCGGAGGT+TGG 0.542790 3_1:-79460297 None:intergenic
CCTCAGTACTTAAAGATTGG+TGG 0.548243 3_1:+79463445 Msa0378620:CDS
GAAAGAGTGGTGAGGATCGG+AGG 0.551627 3_1:-79460301 None:intergenic
ATCGACGACGTCACCGGCGC+TGG 0.555704 3_1:+79460501 Msa0378620:CDS
GGTTAGAAAGGAGATTGGAC+AGG 0.556984 3_1:-79460063 None:intergenic
AGCGGTGAGGCAACAGCGGA+GGG 0.559972 3_1:+79460540 Msa0378620:CDS
CGGCGCTGGTATGAAGGCCG+AGG 0.563738 3_1:+79460515 Msa0378620:CDS
AGAGAATGAGAGGTCCCTCA+TGG 0.567340 3_1:+79463073 Msa0378620:CDS
TAGCTATTGATTCATGGTGA+AGG 0.567933 3_1:-79460206 None:intergenic
TGTTCTGTGAAATGGTGGAG+TGG 0.567991 3_1:-79460261 None:intergenic
ACCGCCGGTTCCCAATCCTC+CGG 0.570735 3_1:+79460432 Msa0378620:CDS
GAAGTCATCGACGACGTCAC+CGG 0.571705 3_1:+79460495 Msa0378620:CDS
TTCCTCAACCTCGACACCGC+CGG 0.572536 3_1:+79460417 Msa0378620:CDS
TGACTTCGCTGTGGTTTCGG+TGG 0.576108 3_1:-79460479 None:intergenic
CAATATAGAGTTCTTACAGT+AGG 0.580470 3_1:-79463492 None:intergenic
TTGGAAAGAGTGGTGAGGAT+CGG 0.583594 3_1:-79460304 None:intergenic
CCACCAATCTTTAAGTACTG+AGG 0.588799 3_1:-79463445 None:intergenic
AAAGGTAAAATACCATGAAG+TGG 0.598924 3_1:-79460785 None:intergenic
TAGGTGCAGTTTGGAAAGAG+TGG 0.600373 3_1:-79460314 None:intergenic
TGGCGTTGACGTTGGTGTCG+AGG 0.601937 3_1:-79460365 None:intergenic
GGGTTATAAAGAGAAAATTG+TGG 0.610746 3_1:+79463365 Msa0378620:intron
GCTTGATCATAGACAAGCAA+GGG 0.610960 3_1:-79463640 None:intergenic
TTGTTCTAACAGAGAATGAG+AGG 0.611125 3_1:+79463063 Msa0378620:CDS
TGTGGCGGTGGCGTTGACGT+TGG 0.611369 3_1:-79460373 None:intergenic
GCTATTGATTCATGGTGAAG+GGG 0.615964 3_1:-79460204 None:intergenic
GGTTCAGATAATAGTATGGG+AGG 0.618510 3_1:+79463029 Msa0378620:CDS
GATGTTAATCTGTTTGATGG+AGG 0.621633 3_1:+79462999 Msa0378620:CDS
TGTGTAACAGGAGTTTCACC+AGG 0.621894 3_1:+79462924 Msa0378620:intron
TGGCAGAAAGCGAAACGCAA+AGG 0.622833 3_1:+79460573 Msa0378620:CDS
ACCGGAGGATTGGGAACCGG+CGG 0.625286 3_1:-79460433 None:intergenic
GGAAAGCGGTGAGGCAACAG+CGG 0.626255 3_1:+79460536 Msa0378620:CDS
GGGCAACTGGTCAACCGGCG+TGG 0.628223 3_1:-79460661 None:intergenic
ATGTCTTACACGTTCCATGA+GGG 0.635061 3_1:-79463087 None:intergenic
ACAGGAGTTTCACCAGGGGA+AGG 0.636992 3_1:+79462930 Msa0378620:intron
ACATGTCCGAGTCCATGCAA+TGG 0.642083 3_1:+79461606 Msa0378620:CDS
ACTGTTGTTGTTGGTTGTGG+CGG 0.642777 3_1:-79460388 None:intergenic
CATGTCTTACACGTTCCATG+AGG 0.645094 3_1:-79463088 None:intergenic
GATAGAAGCTGTTCATACAA+CGG 0.647941 3_1:-79460612 None:intergenic
TACTCTGCGTTAGGACAACA+GGG 0.650241 3_1:+79460729 Msa0378620:CDS
GGTATGAAGGCCGAGGAAAG+CGG 0.652275 3_1:+79460522 Msa0378620:CDS
ACGGGAGAGCCATTGACCGG+AGG 0.652694 3_1:-79460448 None:intergenic
GTGTTTGAGAATCGCCACGC+CGG 0.654940 3_1:+79460647 Msa0378620:CDS
TGCTTGATCATAGACAAGCA+AGG 0.659790 3_1:-79463641 None:intergenic
AGTTGCTACTAGCTAGTGTG+TGG 0.669965 3_1:-79460132 None:intergenic
GGTGGCAATCACATTCAAAG+TGG 0.680210 3_1:+79463463 Msa0378620:CDS
GCAGTTTGGAAAGAGTGGTG+AGG 0.695329 3_1:-79460309 None:intergenic
CGTCGTCGATGACTTCGCTG+TGG 0.697602 3_1:-79460488 None:intergenic
GTGTAACAGGAGTTTCACCA+GGG 0.706920 3_1:+79462925 Msa0378620:intron
GAAGGCCGAGGAAAGCGGTG+AGG 0.708487 3_1:+79460527 Msa0378620:CDS
TGTAACAGGAGTTTCACCAG+GGG 0.775474 3_1:+79462926 Msa0378620:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTACAATATTTTTTTGTA+TGG + chr3_1:79461301-79461320 Msa0378620:intron 10.0%
!! TTTGTAAATATTATTGAGAA+AGG - chr3_1:79460806-79460825 None:intergenic 15.0%
!!! AATTTTCTGCAATAATATTT+TGG + chr3_1:79461357-79461376 Msa0378620:intron 15.0%
!!! TATTTTTTATTTTTTTGTCG+TGG + chr3_1:79461435-79461454 Msa0378620:intron 15.0%
!!! AAGTTTTTATAGGAAAAAAT+AGG + chr3_1:79461816-79461835 Msa0378620:intron 15.0%
!!! ATTTATACTTTTCTCAATAT+AGG + chr3_1:79461910-79461929 Msa0378620:intron 15.0%
!! AATGATAATTAAGATCTTAA+TGG + chr3_1:79462009-79462028 Msa0378620:intron 15.0%
!! CTAATAAATTATTCATTATG+TGG - chr3_1:79462644-79462663 None:intergenic 15.0%
!! AATTTATTAGTAAGATAGAA+TGG + chr3_1:79462654-79462673 Msa0378620:intron 15.0%
!!! TTATATGGAGTATCAATAAA+TGG - chr3_1:79460087-79460106 None:intergenic 20.0%
!!! GCAAAACTTAAATTTTAACT+CGG + chr3_1:79460955-79460974 Msa0378620:intron 20.0%
!! AAAATAATTAAGGTAGCTAA+TGG + chr3_1:79461130-79461149 Msa0378620:intron 20.0%
!! TATGTTAAAATAAGCTCAAA+AGG - chr3_1:79461197-79461216 None:intergenic 20.0%
!!! TACAATATTTTTTTGTATGG+TGG + chr3_1:79461304-79461323 Msa0378620:intron 20.0%
!!! AGAATTTATTTTCTGTTGTA+TGG + chr3_1:79461501-79461520 Msa0378620:intron 20.0%
!! TTCTCAATATAGGAATTATA+CGG + chr3_1:79461920-79461939 Msa0378620:intron 20.0%
!! TAAATTATTCATGACGTATT+TGG - chr3_1:79462168-79462187 None:intergenic 20.0%
!!! CATATTGATTAATATCCAAT+TGG - chr3_1:79462437-79462456 None:intergenic 20.0%
!! ATTATTCATTATGTGGTTTA+AGG - chr3_1:79462637-79462656 None:intergenic 20.0%
!! AAATAACATGCTAAAAAGTA+AGG - chr3_1:79462767-79462786 None:intergenic 20.0%
!! AATTAGTACTCATATCTAAT+GGG - chr3_1:79462883-79462902 None:intergenic 20.0%
!! TAATTAGTACTCATATCTAA+TGG - chr3_1:79462884-79462903 None:intergenic 20.0%
!! GATTACATTAAATGTTGAAT+AGG + chr3_1:79463148-79463167 Msa0378620:intron 20.0%
! GTATCAATAAATGGTTAGAA+AGG - chr3_1:79460078-79460097 None:intergenic 25.0%
!!! TATAGATAGCTATTGATTCA+TGG - chr3_1:79460215-79460234 None:intergenic 25.0%
! ATCAATAGCTATCTATATCA+TGG + chr3_1:79460218-79460237 Msa0378620:exon 25.0%
!!! CAATTTCACTTTTGCAAAAA+AGG - chr3_1:79461000-79461019 None:intergenic 25.0%
!! ACTGAAAATAAGTCTAAAGT+AGG + chr3_1:79461087-79461106 Msa0378620:intron 25.0%
!!! TTTCTGCAATAATATTTTGG+CGG + chr3_1:79461360-79461379 Msa0378620:intron 25.0%
! AAAACATAATTACACTCCAT+TGG - chr3_1:79461416-79461435 None:intergenic 25.0%
!! TATTTTCTGTTGTATGGTTA+CGG + chr3_1:79461507-79461526 Msa0378620:intron 25.0%
! AGGAATAAGCAACAAAAATT+TGG - chr3_1:79461776-79461795 None:intergenic 25.0%
! CATTCGTGTAATTTATCTTT+AGG - chr3_1:79461796-79461815 None:intergenic 25.0%
!! TACACGAATGAAGTTTTTAT+AGG + chr3_1:79461806-79461825 Msa0378620:intron 25.0%
! TCTCAATATAGGAATTATAC+GGG + chr3_1:79461921-79461940 Msa0378620:intron 25.0%
! TGTAAGAAAATTTGAAAAGG+AGG - chr3_1:79461958-79461977 None:intergenic 25.0%
! GCTTGTAAGAAAATTTGAAA+AGG - chr3_1:79461961-79461980 None:intergenic 25.0%
! TCCTGTACATATGAATTATT+TGG + chr3_1:79462082-79462101 Msa0378620:intron 25.0%
! CCTGTACATATGAATTATTT+GGG + chr3_1:79462083-79462102 Msa0378620:intron 25.0%
!! ACATATGAATTATTTGGGTT+AGG + chr3_1:79462088-79462107 Msa0378620:intron 25.0%
!! CATATGAATTATTTGGGTTA+GGG + chr3_1:79462089-79462108 Msa0378620:intron 25.0%
! ACAATTCTGTCAAAAAAACA+AGG - chr3_1:79462315-79462334 None:intergenic 25.0%
! AAAGTCCAAACAATTCATAT+GGG - chr3_1:79462561-79462580 None:intergenic 25.0%
! ATATGAATTGTTTGGACTTT+GGG + chr3_1:79462561-79462580 Msa0378620:intron 25.0%
! AACATCATAGTTATACTGTA+TGG + chr3_1:79462707-79462726 Msa0378620:intron 25.0%
! AATTCTGTCAAAAAAAAGCA+AGG - chr3_1:79462742-79462761 None:intergenic 25.0%
! GTATCTATATTCAAAGTACA+TGG - chr3_1:79462800-79462819 None:intergenic 25.0%
! AACATTTAATGTAATCCATG+AGG - chr3_1:79463144-79463163 None:intergenic 25.0%
! CATTAAATGTTGAATAGGAA+AGG + chr3_1:79463153-79463172 Msa0378620:intron 25.0%
!!! GTATGTTTTGAATCTGAAAA+AGG - chr3_1:79463543-79463562 None:intergenic 25.0%
! TTTCAGATTCAAAACATACT+TGG + chr3_1:79463544-79463563 Msa0378620:three_prime_UTR 25.0%
TAAATGGTTAGAAAGGAGAT+TGG - chr3_1:79460071-79460090 None:intergenic 30.0%
GAAGTGATGAACAACTTATA+TGG - chr3_1:79460102-79460121 None:intergenic 30.0%
AAGAAATGGAGAAAAAAGGA+GGG - chr3_1:79460174-79460193 None:intergenic 30.0%
AAAGAAATGGAGAAAAAAGG+AGG - chr3_1:79460175-79460194 None:intergenic 30.0%
GAGAAAGAAATGGAGAAAAA+AGG - chr3_1:79460178-79460197 None:intergenic 30.0%
AAAGGTAAAATACCATGAAG+TGG - chr3_1:79460788-79460807 None:intergenic 30.0%
! TGTCAATTAATGGATGGAAA+TGG + chr3_1:79460871-79460890 Msa0378620:intron 30.0%
! TTAATGGATGGAAATGGATT+TGG + chr3_1:79460877-79460896 Msa0378620:intron 30.0%
AAGTGAAATTGAAACATGCA+CGG + chr3_1:79461009-79461028 Msa0378620:intron 30.0%
GTCATTCATGCATAGTAATA+GGG - chr3_1:79461069-79461088 None:intergenic 30.0%
AGTCATTCATGCATAGTAAT+AGG - chr3_1:79461070-79461089 None:intergenic 30.0%
!!! CCTTTTGAGCTTATTTTAAC+CGG + chr3_1:79461194-79461213 Msa0378620:intron 30.0%
TATACATAAATCCTTGCCAA+TGG + chr3_1:79461397-79461416 Msa0378620:intron 30.0%
AAATTTGTGTCTACAGTAAC+TGG - chr3_1:79461470-79461489 None:intergenic 30.0%
! GTTACTGTAGACACAAATTT+TGG + chr3_1:79461470-79461489 Msa0378620:intron 30.0%
CTCAATATAGGAATTATACG+GGG + chr3_1:79461922-79461941 Msa0378620:intron 30.0%
!! TTAATGGTTGATAGTCAAAG+AGG + chr3_1:79462025-79462044 Msa0378620:intron 30.0%
TAATTCATATGTACAGGACA+AGG - chr3_1:79462080-79462099 None:intergenic 30.0%
CCCAAATAATTCATATGTAC+AGG - chr3_1:79462086-79462105 None:intergenic 30.0%
ATTCATGACGTATTTGGTAT+AGG - chr3_1:79462162-79462181 None:intergenic 30.0%
TCAAAAAAACAAGGACAACT+GGG - chr3_1:79462306-79462325 None:intergenic 30.0%
! TTTCTTGGTGGATAATAGTT+TGG - chr3_1:79462362-79462381 None:intergenic 30.0%
ACAAGTTAGCTAATCTTTCT+TGG - chr3_1:79462377-79462396 None:intergenic 30.0%
!!! CATACATCACTTTTTCCAAT+TGG + chr3_1:79462419-79462438 Msa0378620:intron 30.0%
AGTAATAATCAAGCCCTTAA+TGG + chr3_1:79462483-79462502 Msa0378620:intron 30.0%
CTTTGACTATCAACCATTAA+GGG - chr3_1:79462025-79462044 None:intergenic 30.0%
CAAAGTCCAAACAATTCATA+TGG - chr3_1:79462562-79462581 None:intergenic 30.0%
CATATGAATTGTTTGGACTT+TGG + chr3_1:79462560-79462579 Msa0378620:intron 30.0%
AAAAAAAAGCAAGGACAACT+GGG - chr3_1:79462733-79462752 None:intergenic 30.0%
ATTCAAAGTACATGGTAGTT+TGG - chr3_1:79462792-79462811 None:intergenic 30.0%
AGTGATGTTAATCTGTTTGA+TGG + chr3_1:79462996-79463015 Msa0378620:CDS 30.0%
GATGGTTCAGATAATAGTAT+GGG + chr3_1:79463026-79463045 Msa0378620:CDS 30.0%
! ATTAAAGCATGAGTTGAAAC+AGG + chr3_1:79463112-79463131 Msa0378620:CDS 30.0%
TGTGTTGAAACTTGAAATGA+TGG - chr3_1:79463220-79463239 None:intergenic 30.0%
GGGTTATAAAGAGAAAATTG+TGG + chr3_1:79463365-79463384 Msa0378620:intron 30.0%
CAATATAGAGTTCTTACAGT+AGG - chr3_1:79463495-79463514 None:intergenic 30.0%
!! AGCTATTGATTCATGGTGAA+GGG - chr3_1:79460208-79460227 None:intergenic 35.0%
!! TAGCTATTGATTCATGGTGA+AGG - chr3_1:79460209-79460228 None:intergenic 35.0%
! GTTGTTGTTGTTCTGTGAAA+TGG - chr3_1:79460272-79460291 None:intergenic 35.0%
GAAACGCAAAGGTGAAATAA+TGG + chr3_1:79460584-79460603 Msa0378620:CDS 35.0%
ATAGAAGCTGTTCATACAAC+GGG - chr3_1:79460614-79460633 None:intergenic 35.0%
GATAGAAGCTGTTCATACAA+CGG - chr3_1:79460615-79460634 None:intergenic 35.0%
AAGCTTTGCGTGTCAATTAA+TGG + chr3_1:79460861-79460880 Msa0378620:intron 35.0%
TTTGCGTGTCAATTAATGGA+TGG + chr3_1:79460865-79460884 Msa0378620:intron 35.0%
! TGGAAAATTTTCTCTCTCTC+TGG + chr3_1:79460897-79460916 Msa0378620:intron 35.0%
TCATGCATAGTAATAGGGAA+AGG - chr3_1:79461064-79461083 None:intergenic 35.0%
CATGTTAAGATAGGCTCAAA+AGG - chr3_1:79461167-79461186 None:intergenic 35.0%
GGTCAAGTTCATGTTAAGAT+AGG - chr3_1:79461176-79461195 None:intergenic 35.0%
CCGGTTAAAATAAGCTCAAA+AGG - chr3_1:79461227-79461246 None:intergenic 35.0%
TTTAACCGGCATGTTTATGT+AGG + chr3_1:79461238-79461257 Msa0378620:intron 35.0%
TTAACCGGCATGTTTATGTA+GGG + chr3_1:79461239-79461258 Msa0378620:intron 35.0%
TTTATGTATAGAAGCTCGCA+TGG - chr3_1:79461387-79461406 None:intergenic 35.0%
ATAATTACACTCCATTGGCA+AGG - chr3_1:79461411-79461430 None:intergenic 35.0%
TGTACCTGTTAGACTTTGTA+AGG - chr3_1:79461665-79461684 None:intergenic 35.0%
! GTATGTTTTCGGTTCAGTAT+AGG + chr3_1:79461861-79461880 Msa0378620:intron 35.0%
GCTGTTATAGCTATACTGTA+TGG + chr3_1:79462280-79462299 Msa0378620:intron 35.0%
GTCAAAAAAACAAGGACAAC+TGG - chr3_1:79462307-79462326 None:intergenic 35.0%
ATAATAACATGCTACGAGCA+AGG - chr3_1:79462338-79462357 None:intergenic 35.0%
AGTTAGCTAATCTTTCTTGG+TGG - chr3_1:79462374-79462393 None:intergenic 35.0%
CCTTTGACTATCAACCATTA+AGG - chr3_1:79462500-79462519 None:intergenic 35.0%
!! CCTTAATGGTTGATAGTCAA+AGG + chr3_1:79462497-79462516 Msa0378620:intron 35.0%
!! TAATGGTTGATAGTCAAAGG+AGG + chr3_1:79462500-79462519 Msa0378620:intron 35.0%
CAAACAATTCATATGGGACA+AGG - chr3_1:79462555-79462574 None:intergenic 35.0%
CTTGTCCCATATGAATTGTT+TGG + chr3_1:79462553-79462572 Msa0378620:intron 35.0%
! AATTGTTTGGACTTTGGGTT+AGG + chr3_1:79462566-79462585 Msa0378620:intron 35.0%
! ATTGTTTGGACTTTGGGTTA+GGG + chr3_1:79462567-79462586 Msa0378620:intron 35.0%
CAAAAAAAAGCAAGGACAAC+TGG - chr3_1:79462734-79462753 None:intergenic 35.0%
TTTATCTCCACATGTGTAAC+AGG + chr3_1:79462912-79462931 Msa0378620:intron 35.0%
GATGTTAATCTGTTTGATGG+AGG + chr3_1:79462999-79463018 Msa0378620:CDS 35.0%
TAATCTGTTTGATGGAGGTT+TGG + chr3_1:79463004-79463023 Msa0378620:CDS 35.0%
GGATGGTTCAGATAATAGTA+TGG + chr3_1:79463025-79463044 Msa0378620:CDS 35.0%
GATAATAGTATGGGAGGATT+TGG + chr3_1:79463035-79463054 Msa0378620:CDS 35.0%
TCATTCTCTGTTAGAACAAG+AGG - chr3_1:79463062-79463081 None:intergenic 35.0%
TTGTTCTAACAGAGAATGAG+AGG + chr3_1:79463063-79463082 Msa0378620:CDS 35.0%
CCATTCTCTAATACACGTTT+CGG - chr3_1:79463327-79463346 None:intergenic 35.0%
CGAAACGTGTATTAGAGAAT+GGG + chr3_1:79463325-79463344 Msa0378620:intron 35.0%
!!! TGGGTTGCTCTTATTTTTGT+AGG + chr3_1:79463344-79463363 Msa0378620:intron 35.0%
!!! GGGTTGCTCTTATTTTTGTA+GGG + chr3_1:79463345-79463364 Msa0378620:intron 35.0%
GAAAATTGTGGACATAAGAG+AGG + chr3_1:79463377-79463396 Msa0378620:CDS 35.0%
CAACCTCAGTACTTAAAGAT+TGG + chr3_1:79463442-79463461 Msa0378620:CDS 35.0%
AGAGTTCTTACAGTAGGATA+AGG - chr3_1:79463489-79463508 None:intergenic 35.0%
GGACAGGAAATGGAAAGAAT+AGG - chr3_1:79460050-79460069 None:intergenic 40.0%
AAAGGAGATTGGACAGGAAA+TGG - chr3_1:79460060-79460079 None:intergenic 40.0%
AGAAAAAAGGAGGGAAGAGA+GGG - chr3_1:79460165-79460184 None:intergenic 40.0%
GGGGAATAGAGAGAAAGAAA+TGG - chr3_1:79460188-79460207 None:intergenic 40.0%
!! GCTATTGATTCATGGTGAAG+GGG - chr3_1:79460207-79460226 None:intergenic 40.0%
! GTTGTTGTTCTGTGAAATGG+TGG - chr3_1:79460269-79460288 None:intergenic 40.0%
!! GAAGTTGGTACTGTTGTTGT+TGG - chr3_1:79460400-79460419 None:intergenic 40.0%
TAAACAACTCGACCACTTCA+TGG + chr3_1:79460773-79460792 Msa0378620:CDS 40.0%
AACTCCCTACATAAACATGC+CGG - chr3_1:79461246-79461265 None:intergenic 40.0%
CAGTCCTTACAAAGTCTAAC+AGG + chr3_1:79461658-79461677 Msa0378620:CDS 40.0%
ACTGAACCGAAAACATACTG+CGG - chr3_1:79461859-79461878 None:intergenic 40.0%
TATCCCAATATGAGACCCTA+TGG - chr3_1:79461887-79461906 None:intergenic 40.0%
TCAAAGAGGAACATGACTAC+AGG + chr3_1:79462039-79462058 Msa0378620:intron 40.0%
TGATAGTCAAAGGAGGAACA+TGG + chr3_1:79462507-79462526 Msa0378620:intron 40.0%
CAATTCATATGGGACAAGGA+AGG - chr3_1:79462551-79462570 None:intergenic 40.0%
TGAAACTCCTGTTACACATG+TGG - chr3_1:79462922-79462941 None:intergenic 40.0%
GGTTCAGATAATAGTATGGG+AGG + chr3_1:79463029-79463048 Msa0378620:CDS 40.0%
ATGTCTTACACGTTCCATGA+GGG - chr3_1:79463090-79463109 None:intergenic 40.0%
! AGCATGAGTTGAAACAGGTA+CGG + chr3_1:79463117-79463136 Msa0378620:intron 40.0%
CCGAAACGTGTATTAGAGAA+TGG + chr3_1:79463324-79463343 Msa0378620:intron 40.0%
! CCACCAATCTTTAAGTACTG+AGG - chr3_1:79463448-79463467 None:intergenic 40.0%
CCTCAGTACTTAAAGATTGG+TGG + chr3_1:79463445-79463464 Msa0378620:CDS 40.0%
GCTTGATCATAGACAAGCAA+GGG - chr3_1:79463643-79463662 None:intergenic 40.0%
TGCTTGATCATAGACAAGCA+AGG - chr3_1:79463644-79463663 None:intergenic 40.0%
GGTTAGAAAGGAGATTGGAC+AGG - chr3_1:79460066-79460085 None:intergenic 45.0%
AGTTGCTACTAGCTAGTGTG+TGG - chr3_1:79460135-79460154 None:intergenic 45.0%
GAGAAAAAAGGAGGGAAGAG+AGG - chr3_1:79460166-79460185 None:intergenic 45.0%
! GTTCTGTGAAATGGTGGAGT+GGG - chr3_1:79460263-79460282 None:intergenic 45.0%
! TGTTCTGTGAAATGGTGGAG+TGG - chr3_1:79460264-79460283 None:intergenic 45.0%
TTGGAAAGAGTGGTGAGGAT+CGG - chr3_1:79460307-79460326 None:intergenic 45.0%
TAGGTGCAGTTTGGAAAGAG+TGG - chr3_1:79460317-79460336 None:intergenic 45.0%
CTTTCCAAACTGCACCTAAC+TGG + chr3_1:79460319-79460338 Msa0378620:CDS 45.0%
! ACTGTTGTTGTTGGTTGTGG+CGG - chr3_1:79460391-79460410 None:intergenic 45.0%
! GGTACTGTTGTTGTTGGTTG+TGG - chr3_1:79460394-79460413 None:intergenic 45.0%
! TTGTCCTAACGCAGAGTACT+TGG - chr3_1:79460727-79460746 None:intergenic 45.0%
TACTCTGCGTTAGGACAACA+GGG + chr3_1:79460729-79460748 Msa0378620:CDS 45.0%
! TTTTCTCTCTCTCTGGACTC+TGG + chr3_1:79460904-79460923 Msa0378620:intron 45.0%
TTTCTCTCTCTCTGGACTCT+GGG + chr3_1:79460905-79460924 Msa0378620:intron 45.0%
CCATTACTGCTTCCATTGCA+TGG - chr3_1:79461621-79461640 None:intergenic 45.0%
CCATGCAATGGAAGCAGTAA+TGG + chr3_1:79461618-79461637 Msa0378620:CDS 45.0%
! TGGAAGCAGTAATGGCTTGT+TGG + chr3_1:79461626-79461645 Msa0378620:CDS 45.0%
!! GGAAGCAGTAATGGCTTGTT+GGG + chr3_1:79461627-79461646 Msa0378620:CDS 45.0%
TTCGGTTCAGTATAGGCCAT+AGG + chr3_1:79461868-79461887 Msa0378620:intron 45.0%
TCGGTTCAGTATAGGCCATA+GGG + chr3_1:79461869-79461888 Msa0378620:intron 45.0%
TAGGCCATAGGGTCTCATAT+TGG + chr3_1:79461880-79461899 Msa0378620:intron 45.0%
AGGCCATAGGGTCTCATATT+GGG + chr3_1:79461881-79461900 Msa0378620:intron 45.0%
TGTGTAACAGGAGTTTCACC+AGG + chr3_1:79462924-79462943 Msa0378620:intron 45.0%
GTGTAACAGGAGTTTCACCA+GGG + chr3_1:79462925-79462944 Msa0378620:intron 45.0%
TGTAACAGGAGTTTCACCAG+GGG + chr3_1:79462926-79462945 Msa0378620:intron 45.0%
CTGTTTGATGGAGGTTTGGA+TGG + chr3_1:79463008-79463027 Msa0378620:CDS 45.0%
CATGTCTTACACGTTCCATG+AGG - chr3_1:79463091-79463110 None:intergenic 45.0%
! ATTTTACGCAAGAGACGAGC+TGG + chr3_1:79463402-79463421 Msa0378620:CDS 45.0%
GGTGGCAATCACATTCAAAG+TGG + chr3_1:79463463-79463482 Msa0378620:CDS 45.0%
!! CTTATTAATTAAAATAATTA+AGG + chr3_1:79461120-79461139 Msa0378620:intron 5.0%
!! AATAATTTATAATGATATAA+TGG + chr3_1:79462179-79462198 Msa0378620:intron 5.0%
!! AATGGTGGAGTGGGTTGTCT+TGG - chr3_1:79460254-79460273 None:intergenic 50.0%
GCAGTTTGGAAAGAGTGGTG+AGG - chr3_1:79460312-79460331 None:intergenic 50.0%
TGAGCCAGTTAGGTGCAGTT+TGG - chr3_1:79460326-79460345 None:intergenic 50.0%
CGATGACTTCGCTGTGGTTT+CGG - chr3_1:79460485-79460504 None:intergenic 50.0%
TGGCAGAAAGCGAAACGCAA+AGG + chr3_1:79460573-79460592 Msa0378620:CDS 50.0%
GTTGCCAAGTACTCTGCGTT+AGG + chr3_1:79460720-79460739 Msa0378620:CDS 50.0%
GTACTCTGCGTTAGGACAAC+AGG + chr3_1:79460728-79460747 Msa0378620:CDS 50.0%
CATGGACTCGGACATGTTGT+TGG - chr3_1:79461603-79461622 None:intergenic 50.0%
ACATGTCCGAGTCCATGCAA+TGG + chr3_1:79461606-79461625 Msa0378620:CDS 50.0%
CTGCTTCCATTGCATGGACT+CGG - chr3_1:79461615-79461634 None:intergenic 50.0%
! CTGCTGCCGCAGTATGTTTT+CGG + chr3_1:79461850-79461869 Msa0378620:intron 50.0%
CAAAGGAGGAACATGGCTAC+AGG + chr3_1:79462514-79462533 Msa0378620:intron 50.0%
AGAGAATGAGAGGTCCCTCA+TGG + chr3_1:79463073-79463092 Msa0378620:CDS 50.0%
TGAAACAGGTACGGTCCTCA+TGG + chr3_1:79463126-79463145 Msa0378620:intron 50.0%
AGACGAGCTGGAAAACTTCC+TGG + chr3_1:79463414-79463433 Msa0378620:CDS 50.0%
! AGTACTGAGGTTGTGTCACC+AGG - chr3_1:79463435-79463454 None:intergenic 50.0%
GAAAGAGTGGTGAGGATCGG+AGG - chr3_1:79460304-79460323 None:intergenic 55.0%
!! AGGGCGTTGTTGAGCCAGTT+AGG - chr3_1:79460336-79460355 None:intergenic 55.0%
! GGTGTCGAGGTTGCGAAGAA+GGG - chr3_1:79460355-79460374 None:intergenic 55.0%
! TGGTGTCGAGGTTGCGAAGA+AGG - chr3_1:79460356-79460375 None:intergenic 55.0%
! GTTGTTGTTGGTTGTGGCGG+TGG - chr3_1:79460388-79460407 None:intergenic 55.0%
! GGTGTCGAGGTTGAGGAAGT+TGG - chr3_1:79460415-79460434 None:intergenic 55.0%
TTGACCGGAGGATTGGGAAC+CGG - chr3_1:79460439-79460458 None:intergenic 55.0%
GTTCCCAATCCTCCGGTCAA+TGG + chr3_1:79460439-79460458 Msa0378620:CDS 55.0%
GAGCCATTGACCGGAGGATT+GGG - chr3_1:79460445-79460464 None:intergenic 55.0%
AGAGCCATTGACCGGAGGAT+TGG - chr3_1:79460446-79460465 None:intergenic 55.0%
TGACTTCGCTGTGGTTTCGG+TGG - chr3_1:79460482-79460501 None:intergenic 55.0%
GAAGTCATCGACGACGTCAC+CGG + chr3_1:79460495-79460514 Msa0378620:CDS 55.0%
GGTATGAAGGCCGAGGAAAG+CGG + chr3_1:79460522-79460541 Msa0378620:CDS 55.0%
TGTTGCCTCACCGCTTTCCT+CGG - chr3_1:79460535-79460554 None:intergenic 55.0%
GTGTTTGAGAATCGCCACGC+CGG + chr3_1:79460647-79460666 Msa0378620:CDS 55.0%
ATCCTGGGCAACTGGTCAAC+CGG - chr3_1:79460669-79460688 None:intergenic 55.0%
ATGCGACTGCGACATCAACG+AGG - chr3_1:79461545-79461564 None:intergenic 55.0%
ACAGGAGTTTCACCAGGGGA+AGG + chr3_1:79462930-79462949 Msa0378620:intron 55.0%
! GTTTCACCAGGGGAAGGTAC+AGG + chr3_1:79462936-79462955 Msa0378620:CDS 55.0%
GAGTGGTGAGGATCGGAGGT+TGG - chr3_1:79460300-79460319 None:intergenic 60.0%
!! TGGCGTTGACGTTGGTGTCG+AGG - chr3_1:79460368-79460387 None:intergenic 60.0%
TTCCTCAACCTCGACACCGC+CGG + chr3_1:79460417-79460436 Msa0378620:CDS 60.0%
AGGACGGGAGAGCCATTGAC+CGG - chr3_1:79460454-79460473 None:intergenic 60.0%
GTTTCGGTGGAGGACAGGAC+GGG - chr3_1:79460469-79460488 None:intergenic 60.0%
GGTTTCGGTGGAGGACAGGA+CGG - chr3_1:79460470-79460489 None:intergenic 60.0%
CTGTGGTTTCGGTGGAGGAC+AGG - chr3_1:79460474-79460493 None:intergenic 60.0%
CTTCGCTGTGGTTTCGGTGG+AGG - chr3_1:79460479-79460498 None:intergenic 60.0%
CGTCGTCGATGACTTCGCTG+TGG - chr3_1:79460491-79460510 None:intergenic 60.0%
GGAAAGCGGTGAGGCAACAG+CGG + chr3_1:79460536-79460555 Msa0378620:CDS 60.0%
CAGCGGAGGGAGTGATGAAC+TGG + chr3_1:79460553-79460572 Msa0378620:CDS 60.0%
CTCTCTCTCTGGACTCTGGG+TGG + chr3_1:79460908-79460927 Msa0378620:intron 60.0%
GTTGCTCCTGTACCTTCCCC+TGG - chr3_1:79462945-79462964 None:intergenic 60.0%
!! TGTGGCGGTGGCGTTGACGT+TGG - chr3_1:79460376-79460395 None:intergenic 65.0%
! AACCGGCGGTGTCGAGGTTG+AGG - chr3_1:79460422-79460441 None:intergenic 65.0%
! ATTGGGAACCGGCGGTGTCG+AGG - chr3_1:79460428-79460447 None:intergenic 65.0%
!! ACCGCCGGTTCCCAATCCTC+CGG + chr3_1:79460432-79460451 Msa0378620:CDS 65.0%
ACCGGAGGATTGGGAACCGG+CGG - chr3_1:79460436-79460455 None:intergenic 65.0%
ACGGGAGAGCCATTGACCGG+AGG - chr3_1:79460451-79460470 None:intergenic 65.0%
!! CGTCACCGGCGCTGGTATGA+AGG + chr3_1:79460509-79460528 Msa0378620:CDS 65.0%
CTCGGCCTTCATACCAGCGC+CGG - chr3_1:79460517-79460536 None:intergenic 65.0%
GAAGGCCGAGGAAAGCGGTG+AGG + chr3_1:79460527-79460546 Msa0378620:CDS 65.0%
AAGCGGTGAGGCAACAGCGG+AGG + chr3_1:79460539-79460558 Msa0378620:CDS 65.0%
AGCGGTGAGGCAACAGCGGA+GGG + chr3_1:79460540-79460559 Msa0378620:CDS 65.0%
!! GAGCGTCGATCCTGGGCAAC+TGG - chr3_1:79460677-79460696 None:intergenic 65.0%
!! GCCAGCTGAGCGTCGATCCT+GGG - chr3_1:79460684-79460703 None:intergenic 65.0%
!! TGCCAGCTGAGCGTCGATCC+TGG - chr3_1:79460685-79460704 None:intergenic 65.0%
ATCGACGACGTCACCGGCGC+TGG + chr3_1:79460501-79460520 Msa0378620:CDS 70.0%
!! CGGCGCTGGTATGAAGGCCG+AGG + chr3_1:79460515-79460534 Msa0378620:CDS 70.0%
GGGCAACTGGTCAACCGGCG+TGG - chr3_1:79460664-79460683 None:intergenic 70.0%
! CGCCGGTTGACCAGTTGCCC+AGG + chr3_1:79460664-79460683 Msa0378620:CDS 70.0%
GCCCAGGATCGACGCTCAGC+TGG + chr3_1:79460680-79460699 Msa0378620:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 79460034 79463796 79460034 ID=Msa0378620;Name=Msa0378620
chr3_1 mRNA 79460034 79463796 79460034 ID=Msa0378620-mRNA-1;Parent=Msa0378620;Name=Msa0378620-mRNA-1;_AED=0.07;_eAED=0.07;_QI=203|1|1|1|1|1|4|281|342
chr3_1 exon 79460034 79460794 79460034 ID=Msa0378620-mRNA-1:exon:19506;Parent=Msa0378620-mRNA-1
chr3_1 exon 79461559 79461679 79461559 ID=Msa0378620-mRNA-1:exon:19507;Parent=Msa0378620-mRNA-1
chr3_1 exon 79462934 79463133 79462934 ID=Msa0378620-mRNA-1:exon:19508;Parent=Msa0378620-mRNA-1
chr3_1 exon 79463366 79463796 79463366 ID=Msa0378620-mRNA-1:exon:19509;Parent=Msa0378620-mRNA-1
chr3_1 five_prime_UTR 79460034 79460236 79460034 ID=Msa0378620-mRNA-1:five_prime_utr;Parent=Msa0378620-mRNA-1
chr3_1 CDS 79460237 79460794 79460237 ID=Msa0378620-mRNA-1:cds;Parent=Msa0378620-mRNA-1
chr3_1 CDS 79461559 79461679 79461559 ID=Msa0378620-mRNA-1:cds;Parent=Msa0378620-mRNA-1
chr3_1 CDS 79462934 79463133 79462934 ID=Msa0378620-mRNA-1:cds;Parent=Msa0378620-mRNA-1
chr3_1 CDS 79463366 79463515 79463366 ID=Msa0378620-mRNA-1:cds;Parent=Msa0378620-mRNA-1
chr3_1 three_prime_UTR 79463516 79463796 79463516 ID=Msa0378620-mRNA-1:three_prime_utr;Parent=Msa0378620-mRNA-1
Gene Sequence

>Msa0378620

ATGGCGTATCACAACCAAGACAACCCACTCCACCATTTCACAGAACAACAACAACAACAACCAACCTCCGATCCTCACCACTCTTTCCAAACTGCACCTAACTGGCTCAACAACGCCCTTCTTCGCAACCTCGACACCAACGTCAACGCCACCGCCACAACCAACAACAACAGTACCAACTTCCTCAACCTCGACACCGCCGGTTCCCAATCCTCCGGTCAATGGCTCTCCCGTCCTGTCCTCCACCGAAACCACAGCGAAGTCATCGACGACGTCACCGGCGCTGGTATGAAGGCCGAGGAAAGCGGTGAGGCAACAGCGGAGGGAGTGATGAACTGGCAGAAAGCGAAACGCAAAGGTGAAATAATGGCGCACCCGTTGTATGAACAGCTTCTATCAGCACACGTGTCGTGTTTGAGAATCGCCACGCCGGTTGACCAGTTGCCCAGGATCGACGCTCAGCTGGCAGAGTCACAGAATGTTGTTGCCAAGTACTCTGCGTTAGGACAACAGGGCATGCTTGATAACGATGATAATAAACAACTCGACCACTTCATGTCGCATTATGTTTTGTTGCTTTGTTCGTTCAAAGAACAGCTCCAACAACATGTCCGAGTCCATGCAATGGAAGCAGTAATGGCTTGTTGGGAGATCGAACAGTCCTTACAAAGTCTAACAGGAGTTTCACCAGGGGAAGGTACAGGAGCAACAATGTCTGAAGATGAAGATGAGCAAGTAGACAGTGATGTTAATCTGTTTGATGGAGGTTTGGATGGTTCAGATAATAGTATGGGAGGATTTGGTCCTCTTGTTCTAACAGAGAATGAGAGGTCCCTCATGGAACGTGTAAGACATGAATTAAAGCATGAGTTGAAACAGGGTTATAAAGAGAAAATTGTGGACATAAGAGAGGAAATTTTACGCAAGAGACGAGCTGGAAAACTTCCTGGTGACACAACCTCAGTACTTAAAGATTGGTGGCAATCACATTCAAAGTGGCCTTATCCTACTGTAAGAACTCTATATTGA

Protein sequence

>Msa0378620

MAYHNQDNPLHHFTEQQQQQPTSDPHHSFQTAPNWLNNALLRNLDTNVNATATTNNNSTNFLNLDTAGSQSSGQWLSRPVLHRNHSEVIDDVTGAGMKAEESGEATAEGVMNWQKAKRKGEIMAHPLYEQLLSAHVSCLRIATPVDQLPRIDAQLAESQNVVAKYSALGQQGMLDNDDNKQLDHFMSHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSEDEDEQVDSDVNLFDGGLDGSDNSMGGFGPLVLTENERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKDWWQSHSKWPYPTVRTLY*