AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1240330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1240330 MtrunA17_Chr8g0352361 98.514 875 11 1 18 890 19 893 0.0 1776
Msa1240330 MtrunA17_Chr2g0296421 81.932 797 127 8 109 890 248 1042 0.0 1324
Msa1240330 MtrunA17_Chr2g0296421 55.128 156 56 3 10 154 5 157 1.08e-39 159
Msa1240330 MtrunA17_Chr1g0191141 31.350 689 394 19 232 849 378 1058 2.05e-90 310
Msa1240330 MtrunA17_Chr7g0224051 31.753 696 385 20 234 849 387 1072 2.64e-88 305
Msa1240330 MtrunA17_Chr3g0114161 30.460 696 393 18 233 849 520 1203 1.11e-86 301
Msa1240330 MtrunA17_Chr7g0225791 30.880 625 366 11 279 849 628 1240 7.95e-85 296
Msa1240330 MtrunA17_Chr5g0437621 30.595 706 393 22 225 849 570 1259 4.66e-82 288
Msa1240330 MtrunA17_Chr7g0233021 31.669 641 347 21 279 849 567 1186 1.13e-81 287
Msa1240330 MtrunA17_Chr4g0047081 30.635 630 361 14 279 849 578 1190 9.25e-81 284
Msa1240330 MtrunA17_Chr7g0232971 29.161 679 383 17 247 849 596 1252 8.45e-79 279
Msa1240330 MtrunA17_Chr7g0233031 29.480 692 370 24 242 849 542 1199 2.87e-74 265
Msa1240330 MtrunA17_Chr7g0233001 31.612 484 288 9 398 849 3 475 1.60e-67 234
Msa1240330 MtrunA17_Chr7g0232991 29.803 557 307 14 360 849 75 614 3.84e-65 231
Msa1240330 MtrunA17_Chr2g0320781 38.961 231 135 6 609 835 5 233 2.91e-35 134
Msa1240330 MtrunA17_Chr4g0052341 24.911 562 319 22 360 884 747 1242 9.17e-32 134
Msa1240330 MtrunA17_Chr3g0137091 25.000 576 349 20 306 847 232 758 6.75e-31 131
Msa1240330 MtrunA17_Chr5g0393461 25.000 548 332 16 346 847 172 686 5.42e-30 128
Msa1240330 MtrunA17_Chr8g0384531 25.520 529 315 17 351 833 377 872 6.54e-27 118
Msa1240330 MtrunA17_Chr1g0190391 27.570 214 143 3 352 553 576 789 4.04e-26 115
Msa1240330 MtrunA17_Chr1g0163011 22.472 534 346 17 358 841 195 710 3.58e-25 112
Msa1240330 MtrunA17_Chr5g0394201 24.536 485 321 17 354 832 359 804 5.24e-25 112
Msa1240330 MtrunA17_Chr1g0183681 25.651 499 310 17 379 845 410 879 8.48e-25 111
Msa1240330 MtrunA17_Chr5g0442141 25.540 509 293 16 355 833 614 1066 1.66e-24 110
Msa1240330 MtrunA17_Chr1g0205891 24.949 493 310 19 354 832 372 818 2.23e-24 110
Msa1240330 MtrunA17_Chr4g0066651 24.820 556 321 24 354 870 985 1482 2.11e-21 101
Msa1240330 MtrunA17_Chr3g0095091 24.558 509 298 17 355 833 568 1020 2.40e-21 100
Msa1240330 MtrunA17_Chr5g0403921 23.265 533 333 17 355 859 181 665 9.65e-21 98.2
Msa1240330 MtrunA17_Chr7g0248031 24.561 513 290 22 355 826 991 1447 6.93e-18 89.7
Msa1240330 MtrunA17_Chr4g0040301 34.132 167 94 5 710 867 394 553 3.02e-17 86.7
Msa1240330 MtrunA17_Chr1g0190381 35.570 149 87 2 703 842 195 343 7.37e-17 85.1
Msa1240330 MtrunA17_Chr7g0232121 22.767 571 336 25 358 881 39 551 3.96e-15 80.1
Msa1240330 MtrunA17_Chr1g0175191 34.109 129 80 1 704 832 1070 1193 1.37e-14 79.0
Msa1240330 MtrunA17_Chr8g0348721 23.307 502 309 23 355 826 984 1439 1.70e-14 78.6
Msa1240330 MtrunA17_Chr1g0168031 33.103 145 92 2 698 842 989 1128 5.44e-13 73.2
Msa1240330 MtrunA17_Chr7g0224021 37.500 88 42 2 352 428 25 110 1.05e-12 65.9
Msa1240330 MtrunA17_Chr2g0281601 36.585 123 73 2 710 832 1146 1263 3.67e-12 70.9
Msa1240330 MtrunA17_Chr1g0212331 33.333 126 78 3 708 832 880 1000 1.51e-11 68.6
Msa1240330 MtrunA17_Chr7g0255821 36.220 127 74 3 709 833 663 784 3.56e-11 67.4
Msa1240330 MtrunA17_Chr2g0320751 34.351 131 79 3 703 832 857 981 5.11e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1240330 AT2G16390.2 57.143 868 344 11 38 890 37 891 0.0 980
Msa1240330 AT2G16390.1 57.143 868 344 11 38 890 34 888 0.0 980
Msa1240330 AT2G21450.3 54.315 672 282 6 239 890 57 723 0.0 746
Msa1240330 AT2G21450.1 54.315 672 282 6 239 890 148 814 0.0 746
Msa1240330 AT2G21450.2 54.315 672 282 6 239 890 155 821 0.0 746
Msa1240330 AT1G05490.1 31.339 702 379 20 229 849 674 1353 3.53e-88 307
Msa1240330 AT3G24340.1 30.909 660 373 17 242 849 453 1081 1.26e-82 289
Msa1240330 AT3G42670.2 29.185 675 410 15 240 849 539 1210 9.60e-80 282
Msa1240330 AT3G42670.3 29.185 675 410 15 240 849 539 1210 9.60e-80 282
Msa1240330 AT3G42670.1 29.185 675 410 15 240 849 539 1210 9.60e-80 282
Msa1240330 AT3G42670.4 28.951 677 411 15 240 849 539 1212 2.48e-79 280
Msa1240330 AT5G20420.1 29.142 676 410 15 247 857 552 1223 2.94e-78 277
Msa1240330 AT3G32330.1 39.067 343 174 3 336 673 1 313 4.76e-71 238
Msa1240330 AT3G32280.1 35.145 276 130 2 277 552 248 474 2.21e-51 188
Msa1240330 AT1G08600.4 26.876 573 323 16 352 842 712 1270 5.91e-48 186
Msa1240330 AT1G08600.3 26.876 573 323 16 352 842 712 1270 5.91e-48 186
Msa1240330 AT1G08600.2 26.876 573 323 16 352 842 712 1270 5.91e-48 186
Msa1240330 AT1G08600.1 26.445 571 307 17 352 842 712 1249 5.40e-41 164
Msa1240330 AT3G31900.1 32.014 278 129 5 277 554 153 370 1.52e-38 149
Msa1240330 AT5G44800.1 25.704 533 304 19 361 861 692 1164 1.73e-32 137
Msa1240330 AT5G63950.1 27.011 522 307 19 355 833 374 864 1.09e-28 124
Msa1240330 AT5G63950.2 26.408 515 302 18 355 833 374 847 1.11e-27 121
Msa1240330 AT4G31900.2 25.241 519 307 18 358 857 184 640 1.49e-26 117
Msa1240330 AT4G31900.1 25.241 519 307 18 358 857 225 681 2.47e-26 117
Msa1240330 AT4G31900.3 25.241 519 307 18 358 857 225 681 2.95e-26 116
Msa1240330 AT2G13370.1 25.400 500 297 15 358 833 625 1072 8.96e-26 115
Msa1240330 AT2G13370.2 25.400 500 297 15 358 833 625 1072 8.96e-26 115
Msa1240330 AT2G13370.3 25.400 500 297 15 358 833 625 1072 8.96e-26 115
Msa1240330 AT2G25170.1 23.211 517 323 16 358 847 273 742 4.25e-24 110
Msa1240330 AT2G25170.4 23.211 517 323 16 358 847 273 742 4.25e-24 110
Msa1240330 AT2G25170.3 23.211 517 323 16 358 847 299 768 5.13e-24 109
Msa1240330 AT2G25170.2 23.211 517 323 16 358 847 290 759 5.20e-24 109
Msa1240330 AT2G02090.1 22.816 561 343 20 358 857 213 744 5.38e-22 102
Msa1240330 AT2G28290.2 25.047 535 335 21 355 865 751 1243 6.67e-22 103
Msa1240330 AT2G28290.6 25.047 535 335 21 355 865 752 1244 7.98e-22 102
Msa1240330 AT2G28290.3 25.047 535 335 21 355 865 751 1243 8.83e-22 102
Msa1240330 AT2G28290.4 25.047 535 335 21 355 865 751 1243 8.83e-22 102
Msa1240330 AT2G28290.1 25.047 535 335 21 355 865 751 1243 8.84e-22 102
Msa1240330 AT2G28290.5 25.047 535 335 21 355 865 752 1244 9.00e-22 102
Msa1240330 AT2G18760.3 24.798 496 316 15 379 845 463 930 1.13e-21 102
Msa1240330 AT2G18760.4 25.000 496 315 16 379 845 404 871 1.22e-21 102
Msa1240330 AT2G18760.1 25.000 496 315 16 379 845 404 871 1.22e-21 102
Msa1240330 AT2G18760.2 25.000 496 315 16 379 845 404 871 1.22e-21 102
Msa1240330 AT2G18760.7 25.000 496 315 16 379 845 404 871 1.22e-21 102
Msa1240330 AT2G18760.5 25.000 496 315 16 379 845 404 871 1.22e-21 102
Msa1240330 AT2G18760.6 25.000 496 315 16 379 845 404 871 1.22e-21 102
Msa1240330 AT3G06400.2 24.699 498 308 17 357 841 188 631 1.70e-20 98.2
Msa1240330 AT3G06400.1 24.699 498 308 17 357 841 188 631 1.83e-20 97.8
Msa1240330 AT3G06400.3 24.699 498 308 17 357 841 188 631 2.05e-20 97.8
Msa1240330 AT5G66750.1 24.132 547 365 18 301 831 143 655 3.54e-19 93.6
Msa1240330 AT3G19210.3 29.694 229 133 6 339 553 159 373 2.79e-18 90.5
Msa1240330 AT3G19210.3 27.211 147 101 2 702 847 541 682 3.37e-11 67.8
Msa1240330 AT3G19210.2 29.694 229 133 6 339 553 159 373 4.01e-18 90.1
Msa1240330 AT3G19210.2 27.211 147 101 2 702 847 539 680 2.23e-11 68.6
Msa1240330 AT3G19210.1 29.694 229 133 6 339 553 159 373 4.48e-18 90.1
Msa1240330 AT3G19210.1 27.211 147 101 2 702 847 541 682 2.21e-11 68.6
Msa1240330 AT2G46020.5 24.502 502 305 19 354 826 977 1433 7.33e-18 89.7
Msa1240330 AT2G46020.1 24.502 502 305 19 354 826 977 1433 7.33e-18 89.7
Msa1240330 AT2G46020.6 24.502 502 305 19 354 826 977 1433 7.33e-18 89.7
Msa1240330 AT2G46020.2 23.772 509 301 18 354 826 977 1434 1.09e-17 89.4
Msa1240330 AT2G46020.3 23.772 509 301 18 354 826 977 1434 1.09e-17 89.4
Msa1240330 AT2G46020.4 23.772 509 301 18 354 826 977 1434 1.09e-17 89.4
Msa1240330 AT1G03750.1 40.650 123 68 2 710 832 542 659 2.86e-17 87.4
Msa1240330 AT1G03750.1 26.961 204 118 6 361 553 142 325 4.44e-12 70.5
Msa1240330 AT5G43530.1 36.364 132 79 2 711 842 1126 1252 5.68e-15 80.1
Msa1240330 AT3G12810.2 29.082 196 115 4 711 890 1086 1273 3.60e-14 77.8
Msa1240330 AT3G12810.1 29.082 196 115 4 711 890 1090 1277 3.67e-14 77.8
Msa1240330 AT1G61140.3 35.246 122 74 1 711 832 964 1080 3.19e-12 71.2
Msa1240330 AT1G61140.1 35.246 122 74 1 711 832 1122 1238 3.21e-12 71.2
Msa1240330 AT1G11100.3 35.246 122 74 2 711 832 971 1087 4.09e-12 70.9
Msa1240330 AT1G11100.5 35.246 122 74 2 711 832 927 1043 4.31e-12 70.9
Msa1240330 AT1G11100.1 35.246 122 74 2 711 832 1070 1186 5.11e-12 70.5
Msa1240330 AT1G11100.2 35.246 122 74 2 711 832 1113 1229 5.12e-12 70.5
Msa1240330 AT1G11100.4 35.246 122 74 2 711 832 1114 1230 5.29e-12 70.5
Msa1240330 AT5G05130.1 33.544 158 96 4 709 863 722 873 2.22e-11 68.6

Find 219 sgRNAs with CRISPR-Local

Find 583 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTATTGCCTTTGAAATATT+TGG 0.058372 8_2:-22769722 Msa1240330:CDS
AAAGAAATCTTCGTGATTTC+AGG 0.179731 8_2:-22769661 Msa1240330:CDS
CTGCAATTGGCTTCAACTTT+GGG 0.188534 8_2:+22769896 None:intergenic
TCTTTCCTTGGGTTATCTTT+AGG 0.200644 8_2:+22772654 None:intergenic
ATATCTGTATTCTCATTTCT+TGG 0.223332 8_2:+22770366 None:intergenic
TGAAGGAGAAGAGTGAAATT+AGG 0.232357 8_2:+22776518 None:intergenic
GTGAGATTGAGGGAAGATTT+TGG 0.251412 8_2:+22776560 None:intergenic
CAACATACAGTGAACTGTTT+AGG 0.257612 8_2:-22768780 Msa1240330:three_prime_UTR
GATTGCTGAAGAAGATTTCT+TGG 0.258285 8_2:-22770874 Msa1240330:CDS
AATAGAGATGGAATATTTAA+AGG 0.264217 8_2:-22769087 Msa1240330:intron
ATGACGGGCTAGAGGATATT+TGG 0.265424 8_2:-22772575 Msa1240330:CDS
ATCTTCTTCCTCTTCTTCTT+CGG 0.267403 8_2:+22771686 None:intergenic
CGTGAAACGCTTTGACGATT+TGG 0.276231 8_2:-22770166 Msa1240330:CDS
AGTTTAGAGGGTGGAGAATA+TGG 0.279708 8_2:-22774374 Msa1240330:CDS
GTATGGTGATCTTCCTCTTC+TGG 0.293249 8_2:+22769397 None:intergenic
AACATACAGTGAACTGTTTA+GGG 0.293302 8_2:-22768779 Msa1240330:three_prime_UTR
TCTGCAATTGGCTTCAACTT+TGG 0.296121 8_2:+22769895 None:intergenic
ACGTAAAAGCTCTGTATAAA+AGG 0.298646 8_2:-22769237 Msa1240330:intron
GTGAAGGGATTTCATTGGTT+GGG 0.299232 8_2:-22769546 Msa1240330:CDS
GTAGTAGTGAAGAACTTTAC+TGG 0.300350 8_2:+22770071 None:intergenic
GAAGGAGAAGAGTGAAATTA+GGG 0.307951 8_2:+22776519 None:intergenic
TCTTCTTCCTCTTCTTCTTC+GGG 0.315335 8_2:+22771687 None:intergenic
CTCAACTTCAATCTTCTGCC+TGG 0.320090 8_2:+22769984 None:intergenic
ACTCCTTCTTGAAACAAGTA+TGG 0.324325 8_2:+22769380 None:intergenic
CTCTTTATCAAAATCATGTT+AGG 0.326043 8_2:-22770290 Msa1240330:CDS
CTTTCAAGAATCGATCAATA+AGG 0.330628 8_2:+22774273 None:intergenic
TTTGTTCTAAAAGACGATCT+TGG 0.336791 8_2:-22771645 Msa1240330:CDS
CTTGTATTGAAACTCAAATA+TGG 0.336843 8_2:+22771578 None:intergenic
AATGCAGGAGACTGCCGTTT+TGG 0.338469 8_2:+22774047 None:intergenic
TCATCACATTTCTCTGCAAT+TGG 0.344619 8_2:+22769883 None:intergenic
AGATCAAAATGTCATAGATT+TGG 0.353547 8_2:-22774216 Msa1240330:CDS
ATCCATGATATGATCAGATA+TGG 0.358045 8_2:+22769855 None:intergenic
ATTCAGACGAGGAGGATGAT+AGG 0.362438 8_2:-22774109 Msa1240330:CDS
TAAACACCTTTATCTTTCCT+TGG 0.364500 8_2:+22772642 None:intergenic
CTGCCTCCTAATGCATACTA+TGG 0.365235 8_2:-22772714 Msa1240330:CDS
TTTCTCGAGAGCCCGTTGTT+AGG 0.366680 8_2:-22769265 Msa1240330:CDS
TTCTCGAGAGCCCGTTGTTA+GGG 0.368351 8_2:-22769264 Msa1240330:CDS
AAACGCACATTTAAGCCATT+TGG 0.370806 8_2:-22776641 Msa1240330:five_prime_UTR
CAACTTTCTCGTCAGAAACT+TGG 0.374377 8_2:-22770787 Msa1240330:CDS
CTTTCTCCATAGTATGCATT+AGG 0.374710 8_2:+22772708 None:intergenic
CAGTGAACTGTTTAGGGATT+GGG 0.375166 8_2:-22768773 Msa1240330:three_prime_UTR
TCTGAATCAATTATAACAAC+AGG 0.376009 8_2:+22774125 None:intergenic
TTTCCCTTCTTCTTTGGAAA+TGG 0.383506 8_2:+22776588 None:intergenic
GCTTCAACTAGAATCGAGTT+TGG 0.390889 8_2:-22776735 None:intergenic
ATGAAAGTCTTTCCCGATCC+TGG 0.391179 8_2:+22770726 None:intergenic
ACTCCAACCCTTCCACTTCA+TGG 0.391297 8_2:+22769690 None:intergenic
AAAGATAAAGGTGTTTATCT+TGG 0.394549 8_2:-22772636 Msa1240330:CDS
CTTTCTCCATTGTAAGCATT+GGG 0.398754 8_2:+22772762 None:intergenic
TTCTTCTTTGGAAATGGTAG+TGG 0.399041 8_2:+22776594 None:intergenic
TCCTCTTCTTCTTCGGGCGG+AGG 0.399183 8_2:+22771693 None:intergenic
ATGAGCCAGGATGCATCCCC+CGG 0.399794 8_2:+22770752 None:intergenic
AGCGTTTCACGCTAGGTATA+TGG 0.400878 8_2:+22770178 None:intergenic
GGTAGGATATTTAGCAAAGT+AGG 0.403325 8_2:+22774295 None:intergenic
GATAACCCAAGGAAAGATAA+AGG 0.408681 8_2:-22772648 Msa1240330:CDS
GATATGTTTGTCGTGTTTGT+GGG 0.412548 8_2:-22771623 Msa1240330:CDS
TGCATCCTGGCTCATGCTCC+AGG 0.412800 8_2:-22770744 Msa1240330:CDS
TTCTTTGGCTTTCGACGAAT+CGG 0.413140 8_2:+22770920 None:intergenic
ACTTGGTGGGAGACCATCCC+GGG 0.418803 8_2:-22770770 Msa1240330:CDS
GTTTGTGGGGTTATTGATAG+AGG 0.420352 8_2:-22771609 Msa1240330:CDS
GTAGTGGTTAAGTATGTGTT+TGG 0.422976 8_2:+22776610 None:intergenic
CCTAGAAAAGTTGTATTGTC+TGG 0.437420 8_2:-22770315 Msa1240330:CDS
CATATTTGAGTTTCAATACA+AGG 0.440503 8_2:-22771577 Msa1240330:intron
CCGATCCTGGAGCATGAGCC+AGG 0.440756 8_2:+22770739 None:intergenic
AAACACCTTTATCTTTCCTT+GGG 0.441563 8_2:+22772643 None:intergenic
ACTTTCTCCATTGTAAGCAT+TGG 0.442346 8_2:+22772761 None:intergenic
ACCACTAGAGGTCGAGCATT+GGG 0.442508 8_2:+22770666 None:intergenic
TCTGTTACTCGTCAAGCTAT+TGG 0.444358 8_2:-22769484 Msa1240330:CDS
ACAGTGAACTGTTTAGGGAT+TGG 0.444397 8_2:-22768774 Msa1240330:three_prime_UTR
GGCATCCCGTGTCATCATCT+TGG 0.446746 8_2:-22769524 Msa1240330:CDS
CCAAGGGAATATTGTCGACT+TGG 0.450678 8_2:-22770638 Msa1240330:CDS
TCTTGACGAGCTTCCTGGCC+TGG 0.451010 8_2:-22770037 Msa1240330:CDS
TGAAGGGATTTCATTGGTTG+GGG 0.452191 8_2:-22769545 Msa1240330:CDS
CTGGCTCATGCTCCAGGATC+GGG 0.454771 8_2:-22770738 Msa1240330:CDS
GGATATGTTTGTCGTGTTTG+TGG 0.457879 8_2:-22771624 Msa1240330:CDS
TCGTCAAAGCGTTTCACGCT+AGG 0.459802 8_2:+22770171 None:intergenic
TCACTCTTCTCCTTCACAAT+CGG 0.462599 8_2:-22776511 Msa1240330:intron
AAGAAATGAGAATACAGATA+TGG 0.463938 8_2:-22770364 Msa1240330:CDS
GAACTTTAAGCAATATCTCT+TGG 0.466423 8_2:+22770421 None:intergenic
TTTCAAGAATCGATCAATAA+GGG 0.467494 8_2:+22774274 None:intergenic
CTTGAAAGTGGTGACAGATC+AGG 0.469249 8_2:-22774258 Msa1240330:CDS
TTACGTCTTCCCCTAACAAC+GGG 0.470991 8_2:+22769254 None:intergenic
TGACAGCAGATCCCAGCAAC+TGG 0.472484 8_2:-22770550 Msa1240330:CDS
CCAAGTCGACAATATTCCCT+TGG 0.472773 8_2:+22770638 None:intergenic
ATGAAACCGCACCAAGTTGA+AGG 0.476732 8_2:-22770813 Msa1240330:CDS
TTTGATTAGCATGCCGAGGA+TGG 0.477649 8_2:+22770835 None:intergenic
AAGTGGAAGGGTTGGAGTCT+CGG 0.479399 8_2:-22769685 Msa1240330:CDS
ACTGTTTGTATCCTAAGAAA+AGG 0.480977 8_2:+22770493 None:intergenic
AAAACTTCTGTGATTGCATA+CGG 0.482094 8_2:+22774401 None:intergenic
TCATCTAAAATGAGAATTGA+GGG 0.482745 8_2:+22770399 None:intergenic
GTAGGATATTTAGCAAAGTA+GGG 0.482794 8_2:+22774296 None:intergenic
TATTGATCGATTCTTGAAAG+TGG 0.483603 8_2:-22774270 Msa1240330:CDS
TAGGTGTTTGTACTTTGGCA+AGG 0.485081 8_2:+22770334 None:intergenic
TCGTCCGACGCATTCAGGCT+AGG 0.486785 8_2:-22770203 Msa1240330:CDS
AACCTTTCCAAATATTTCAA+AGG 0.488803 8_2:+22769715 None:intergenic
CAAGTCGACAATATTCCCTT+GGG 0.488871 8_2:+22770639 None:intergenic
GGTGAAGGGATTTCATTGGT+TGG 0.488938 8_2:-22769547 Msa1240330:CDS
CTGAACCTATGTGAATCAGC+TGG 0.490694 8_2:-22769772 Msa1240330:CDS
TTCCATATCTGATCATATCA+TGG 0.490782 8_2:-22769857 Msa1240330:CDS
TCAACTTCAATCTTCTGCCT+GGG 0.491267 8_2:+22769985 None:intergenic
TGCCTTTGAAATATTTGGAA+AGG 0.491523 8_2:-22769717 Msa1240330:CDS
ATTGAAACCGAGTGAGATTG+AGG 0.494584 8_2:+22776549 None:intergenic
AGGTGTTTGTACTTTGGCAA+GGG 0.500985 8_2:+22770335 None:intergenic
GGATGAGGAACAAATTCAAA+GGG 0.502729 8_2:-22774195 Msa1240330:CDS
CCTGGCTCATGCTCCAGGAT+CGG 0.504936 8_2:-22770739 Msa1240330:CDS
ACTACCATTTCCAAAGAAGA+AGG 0.505115 8_2:-22776592 Msa1240330:five_prime_UTR
AAACTTAAGTTATCAAGTGA+TGG 0.505358 8_2:-22774467 Msa1240330:CDS
CTCATCTAAAATGAGAATTG+AGG 0.505738 8_2:+22770398 None:intergenic
TTCCTTGGGTTATCTTTAGG+AGG 0.506209 8_2:+22772657 None:intergenic
ACCTCTAGTGGTGCTTCCCA+AGG 0.510520 8_2:-22770655 Msa1240330:CDS
CTTATTCACAAGTCTTCCTC+AGG 0.510714 8_2:-22768937 Msa1240330:three_prime_UTR
TCTGGAGCTGAGTGTTTAGC+TGG 0.512958 8_2:+22776362 None:intergenic
TGTTTGGATTCACGTCCAAA+TGG 0.515848 8_2:+22776626 None:intergenic
TCAATCAAAGCATGTGGTGA+AGG 0.516797 8_2:-22769562 Msa1240330:CDS
CAGTTTGCAACTCTCTACAT+TGG 0.523193 8_2:+22768837 None:intergenic
GCCATGTTCAGCACAAGCTA+AGG 0.525758 8_2:-22774441 Msa1240330:CDS
CACCACTAGAGGTCGAGCAT+TGG 0.525762 8_2:+22770665 None:intergenic
CTTTCTCGTCAGAAACTTGG+TGG 0.528537 8_2:-22770784 Msa1240330:CDS
AACTTGGTGGGAGACCATCC+CGG 0.528539 8_2:-22770771 Msa1240330:CDS
TCACCATACTTGTTTCAAGA+AGG 0.531321 8_2:-22769383 Msa1240330:CDS
TCCTCCGCCCGAAGAAGAAG+AGG 0.537285 8_2:-22771694 Msa1240330:CDS
ATGTGGTGAAGGGATTTCAT+TGG 0.540076 8_2:-22769551 Msa1240330:CDS
TCTTTATCAAAATCATGTTA+GGG 0.540566 8_2:-22770289 Msa1240330:CDS
TTGATTAGCATGCCGAGGAT+GGG 0.541496 8_2:+22770836 None:intergenic
TGGATGAGGAACAAATTCAA+AGG 0.542191 8_2:-22774196 Msa1240330:CDS
CAACTAGAATCGAGTTTGGA+TGG 0.543878 8_2:-22776731 Msa1240330:five_prime_UTR
AGTATCATCAATGGATTCAT+CGG 0.546019 8_2:-22776396 Msa1240330:exon
TGACTCCATCTCTCATATCA+AGG 0.547119 8_2:+22769818 None:intergenic
AAAGTTCTTCACTACTACAA+AGG 0.550973 8_2:-22770066 Msa1240330:CDS
TGGTTGAGTTGCTAAGATGA+AGG 0.552541 8_2:-22768630 Msa1240330:three_prime_UTR
TTCAGACGAGGAGGATGATA+GGG 0.552622 8_2:-22774108 Msa1240330:CDS
TGTATTTGTCAGGTAACATG+TGG 0.553073 8_2:-22769138 Msa1240330:intron
TTGAAACCGAGTGAGATTGA+GGG 0.553679 8_2:+22776550 None:intergenic
TAGCCATGAAGTGGAAGGGT+TGG 0.555020 8_2:-22769693 Msa1240330:CDS
CATCCTCCCAATGCTTACAA+TGG 0.555508 8_2:-22772768 Msa1240330:CDS
ACAGTGAAATCTACCAGGCC+AGG 0.556543 8_2:+22770024 None:intergenic
TTCTCCAGGTATTTCATCTG+AGG 0.558494 8_2:-22774501 Msa1240330:intron
TTTCCCCAGCTGATTCACAT+AGG 0.559110 8_2:+22769767 None:intergenic
AGCTGCTGATTCTCCAGAAG+AGG 0.560162 8_2:-22769410 Msa1240330:CDS
GCAGACCTTGATATGAGAGA+TGG 0.560724 8_2:-22769823 Msa1240330:CDS
TGGAAAGGTTAGCCATGAAG+TGG 0.563673 8_2:-22769702 Msa1240330:CDS
GAAAGTTGAATCCTTCAACT+TGG 0.564597 8_2:+22770802 None:intergenic
CCAGGTATTTCATCTGAGGA+AGG 0.567377 8_2:-22774497 Msa1240330:intron
GACTGTCATTAGTGTTCCTG+AGG 0.570224 8_2:+22768921 None:intergenic
TGTTTATCTTGGTGTACAAG+AGG 0.574886 8_2:-22772625 Msa1240330:CDS
ACAACAGGGCATGGTGCCGC+AGG 0.575262 8_2:+22774140 None:intergenic
GGTTGAGAATACATTACAGA+AGG 0.577283 8_2:-22770145 Msa1240330:CDS
CGAATCGGACATATAAGTCC+TGG 0.578347 8_2:+22770935 None:intergenic
ACGGGCTAGAGGATATTTGG+AGG 0.579451 8_2:-22772572 Msa1240330:CDS
CTGACATATCAGCCCATCCT+CGG 0.580180 8_2:-22770848 Msa1240330:CDS
AAGGTTAGCCATGAAGTGGA+AGG 0.584042 8_2:-22769698 Msa1240330:CDS
AGAATATGGTAGTGTGACAA+AGG 0.585823 8_2:-22774360 Msa1240330:CDS
CAATCAAAGCATGTGGTGAA+GGG 0.586332 8_2:-22769561 Msa1240330:CDS
TCAATTATAACAACAGGGCA+TGG 0.588679 8_2:+22774131 None:intergenic
TGAAGGTTAAAAGGAGCACC+AGG 0.589607 8_2:-22770953 Msa1240330:intron
TGGTTGATGCTGAAGATGAC+GGG 0.589842 8_2:-22772590 Msa1240330:CDS
ACCTTAGCTTGTGCTGAACA+TGG 0.590439 8_2:+22774440 None:intergenic
TCCCAATGCTCGACCTCTAG+TGG 0.592202 8_2:-22770667 Msa1240330:CDS
AATTCAATATCAAATAGAGA+TGG 0.592810 8_2:-22769099 Msa1240330:three_prime_UTR
TGAACCTATGTGAATCAGCT+GGG 0.593499 8_2:-22769771 Msa1240330:CDS
TCAATGTTCTCAATCTTGTG+AGG 0.593862 8_2:-22770260 Msa1240330:CDS
TTCATTTGATTAGCATGCCG+AGG 0.593888 8_2:+22770831 None:intergenic
AGAGTTTCAAACGTGGCAAG+TGG 0.594177 8_2:-22770610 Msa1240330:CDS
TCTTCCTCTTCTTCTTCGGG+CGG 0.594398 8_2:+22771690 None:intergenic
TCTCCATAGTATGCATTAGG+AGG 0.594640 8_2:+22772711 None:intergenic
AATCTTCCCTCAATCTCACT+CGG 0.598976 8_2:-22776556 Msa1240330:five_prime_UTR
TGGTGCTCAAACTTACGCCC+AGG 0.602478 8_2:-22770002 Msa1240330:CDS
AAGAATCGATCAATAAGGGT+AGG 0.608375 8_2:+22774278 None:intergenic
ACAAGAGGAAGAAGATAATG+TGG 0.609892 8_2:-22772610 Msa1240330:CDS
TTTCTCGTCAGAAACTTGGT+GGG 0.610600 8_2:-22770783 Msa1240330:CDS
AAATGTCATAGATTTGGATG+AGG 0.611024 8_2:-22774210 Msa1240330:CDS
GTGGTTGATGCTGAAGATGA+CGG 0.612200 8_2:-22772591 Msa1240330:CDS
TTATCAAAATCATGTTAGGG+AGG 0.612213 8_2:-22770286 Msa1240330:CDS
TTTGGCTCAATCAAAGCATG+TGG 0.612350 8_2:-22769568 Msa1240330:CDS
ATTACTATTATCACACACAA+TGG 0.613137 8_2:+22770464 None:intergenic
ATAGCTTGACGAGTAACAGA+TGG 0.614442 8_2:+22769487 None:intergenic
CCTCTAGTGGTGCTTCCCAA+GGG 0.616113 8_2:-22770654 Msa1240330:CDS
TCTCGAGAGCCCGTTGTTAG+GGG 0.618363 8_2:-22769263 Msa1240330:CDS
CTACCATTTCCAAAGAAGAA+GGG 0.619057 8_2:-22776591 Msa1240330:five_prime_UTR
CAATAGCAATGTCAGAGCAG+AGG 0.619661 8_2:+22768693 None:intergenic
TGCTGAAGATGACGGGCTAG+AGG 0.620033 8_2:-22772583 Msa1240330:CDS
TTGAATCCTTCAACTTGGTG+CGG 0.621581 8_2:+22770807 None:intergenic
TATTTGGAGGGAGATGTCAA+TGG 0.623139 8_2:-22772559 Msa1240330:CDS
TTTGAATGGAATGAATATTG+TGG 0.623573 8_2:-22769340 Msa1240330:CDS
TCTCCATTGTAAGCATTGGG+AGG 0.624764 8_2:+22772765 None:intergenic
TTTACGTCTTCCCCTAACAA+CGG 0.627266 8_2:+22769253 None:intergenic
CTATGATCTATACACTGTGA+AGG 0.627350 8_2:-22770574 Msa1240330:CDS
GAACATCCAAGATGATGACA+CGG 0.628032 8_2:+22769518 None:intergenic
ATGCATGTTACCGATTGTGA+AGG 0.628417 8_2:+22776501 None:intergenic
GTGTTTCAACTTCAAATGCG+CGG 0.628851 8_2:+22769314 None:intergenic
TAGCTTGACGAGTAACAGAT+GGG 0.629929 8_2:+22769488 None:intergenic
TGCCTCCTAAAGATAACCCA+AGG 0.631547 8_2:-22772659 Msa1240330:CDS
GCTAAACACTCAGCTCCAGA+TGG 0.632896 8_2:-22776359 Msa1240330:intron
CGGGCTAGAGGATATTTGGA+GGG 0.633157 8_2:-22772571 Msa1240330:CDS
TATAATTGATTCAGACGAGG+AGG 0.633443 8_2:-22774117 Msa1240330:CDS
GCACCACAGTGAAATCTACC+AGG 0.638762 8_2:+22770019 None:intergenic
GAACTGTTTAGGGATTGGGA+TGG 0.642544 8_2:-22768769 Msa1240330:three_prime_UTR
CCCTTGGGAAGCACCACTAG+AGG 0.642587 8_2:+22770654 None:intergenic
AACTGGAGGTGTTAAAACAA+TGG 0.644165 8_2:-22770533 Msa1240330:CDS
TGAAAACTCTCTCTGTTCAG+CGG 0.645285 8_2:+22769630 None:intergenic
CTGAATCAATTATAACAACA+GGG 0.647689 8_2:+22774126 None:intergenic
AGGTTAGCCATGAAGTGGAA+GGG 0.648273 8_2:-22769697 Msa1240330:CDS
ATATGTTTGTCGTGTTTGTG+GGG 0.652598 8_2:-22771622 Msa1240330:CDS
CAGCAGATCCCAGCAACTGG+AGG 0.656947 8_2:-22770547 Msa1240330:CDS
GTATTTGTCAGGTAACATGT+GGG 0.658755 8_2:-22769137 Msa1240330:intron
TGCATACTATGGAGAAAGCG+CGG 0.658786 8_2:-22772703 Msa1240330:CDS
GGACCCTAGCCTGAATGCGT+CGG 0.659146 8_2:+22770199 None:intergenic
ACACTTGATGTGAAAGAATG+TGG 0.659776 8_2:-22769295 Msa1240330:CDS
AACATCCAAGATGATGACAC+GGG 0.663891 8_2:+22769519 None:intergenic
TAGGATATTTAGCAAAGTAG+GGG 0.668264 8_2:+22774297 None:intergenic
AAGAGAAAAGGATGTTCCTG+CGG 0.672492 8_2:-22774156 Msa1240330:CDS
GAAGTTTAACAATTCACCCG+AGG 0.674213 8_2:-22769602 Msa1240330:CDS
TGTTATAATTGATTCAGACG+AGG 0.676503 8_2:-22774120 Msa1240330:CDS
CTTGGTGGGAGACCATCCCG+GGG 0.683274 8_2:-22770769 Msa1240330:CDS
GAACCTATGTGAATCAGCTG+GGG 0.691335 8_2:-22769770 Msa1240330:CDS
ACAGTGTATAGATCATAGAG+CGG 0.752873 8_2:+22770579 None:intergenic
GGAAGAAAGAGTTTCAAACG+TGG 0.757529 8_2:-22770617 Msa1240330:CDS
AATGACAGTCAATCACAGTG+TGG 0.774958 8_2:-22768908 Msa1240330:three_prime_UTR
TGGCCTGGTAGATTTCACTG+TGG 0.783766 8_2:-22770022 Msa1240330:CDS
TTGGTGGGAGACCATCCCGG+GGG 0.791439 8_2:-22770768 Msa1240330:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATAAATAAAAAATAAA+GGG + chr8_2:22770451-22770470 None:intergenic 0.0%
!! AATAAATAAATAAAAAATAA+AGG + chr8_2:22770452-22770471 None:intergenic 0.0%
!!! TTTTTAATGTAAATTGATTA+TGG - chr8_2:22769206-22769225 Msa1240330:intron 10.0%
!!! TTTTAATGTAAATTGATTAT+GGG - chr8_2:22769207-22769226 Msa1240330:intron 10.0%
!!! TATTTAATTTTTTTCTTTCT+TGG - chr8_2:22769408-22769427 Msa1240330:CDS 10.0%
!!! TTTATATTCATAATTTTTCT+GGG + chr8_2:22769741-22769760 None:intergenic 10.0%
!! CATTATGATAATAATATAAA+AGG + chr8_2:22769869-22769888 None:intergenic 10.0%
!! ATTATTATCATAATGTTATA+CGG - chr8_2:22769874-22769893 Msa1240330:CDS 10.0%
!! TAAGTACATATATTTATTAA+TGG + chr8_2:22770738-22770757 None:intergenic 10.0%
!! TAAATATATGTACTTATTAA+TGG - chr8_2:22770742-22770761 Msa1240330:CDS 10.0%
!!! TTTTGGAATATATAATTTTT+TGG - chr8_2:22771362-22771381 Msa1240330:intron 10.0%
!!! TTAAAAATATACCTTTATTT+GGG - chr8_2:22771413-22771432 Msa1240330:intron 10.0%
!! AAAATAAAATAATGTATGTT+TGG - chr8_2:22771710-22771729 Msa1240330:CDS 10.0%
!!! ATAATTTTTTTCATGTTGTT+TGG + chr8_2:22768673-22768692 None:intergenic 15.0%
!! AAACAACATGAAAAAAATTA+TGG - chr8_2:22768672-22768691 Msa1240330:three_prime_UTR 15.0%
!! ATGAGAAATTAAATGATAAA+TGG + chr8_2:22768903-22768922 None:intergenic 15.0%
!!! TATTTTCATCTATTTGTTAA+TGG - chr8_2:22769131-22769150 Msa1240330:intron 15.0%
!! ATTTACGGTAAAAAAAATAT+GGG + chr8_2:22769276-22769295 None:intergenic 15.0%
!!! TATCATTTGCTATAAAAAAA+AGG + chr8_2:22769514-22769533 None:intergenic 15.0%
!!! GTTTATATTCATAATTTTTC+TGG + chr8_2:22769742-22769761 None:intergenic 15.0%
!! GAAAAATTATGAATATAAAC+CGG - chr8_2:22769742-22769761 Msa1240330:CDS 15.0%
!! ATTAACACATAACTAAATAT+AGG + chr8_2:22769924-22769943 None:intergenic 15.0%
!! CATATATTTATTAATGGAAT+AGG + chr8_2:22770732-22770751 None:intergenic 15.0%
!!! CAAATAAAGGTATATTTTTA+AGG + chr8_2:22771414-22771433 None:intergenic 15.0%
!! CTTAAAAATATACCTTTATT+TGG - chr8_2:22771412-22771431 Msa1240330:intron 15.0%
!! CATAATAATTATTGGAATTT+AGG - chr8_2:22771902-22771921 Msa1240330:intron 15.0%
!!! AATATGTTCTGAAAATTAAA+TGG + chr8_2:22772256-22772275 None:intergenic 15.0%
!!! ATATCTTTTGTTTTATAAAG+CGG - chr8_2:22773108-22773127 Msa1240330:intron 15.0%
!!! AATGTGCTATTATATTATTT+TGG + chr8_2:22774227-22774246 None:intergenic 15.0%
!! AAATAATATAATAGCACATT+AGG - chr8_2:22774227-22774246 Msa1240330:CDS 15.0%
!! ATACAAATAAAACAAGAATT+AGG + chr8_2:22776201-22776220 None:intergenic 15.0%
!!! AATGATAAATGGTTGATTTT+AGG + chr8_2:22768892-22768911 None:intergenic 20.0%
!! AATAAAAACAAAAATTCAGC+TGG + chr8_2:22769115-22769134 None:intergenic 20.0%
!! CATTTACGGTAAAAAAAATA+TGG + chr8_2:22769277-22769296 None:intergenic 20.0%
!!! ATTTTAATCCAACTCATTTA+CGG + chr8_2:22769291-22769310 None:intergenic 20.0%
!!! AAATGAGTTGGATTAAAATA+TGG - chr8_2:22769292-22769311 Msa1240330:CDS 20.0%
!!! TAAGCAATATTTCACTTTTT+AGG - chr8_2:22769579-22769598 Msa1240330:CDS 20.0%
!!! TTTGTTTGTTGCTTATATTT+GGG - chr8_2:22769676-22769695 Msa1240330:CDS 20.0%
!!! TTTTTTTTTGGAAATGTGTT+GGG - chr8_2:22769960-22769979 Msa1240330:CDS 20.0%
!! TATTTATTGAACCGTTTATA+TGG - chr8_2:22770464-22770483 Msa1240330:CDS 20.0%
!! AAAGGCTTATATAATTCAAT+TGG + chr8_2:22770558-22770577 None:intergenic 20.0%
!! AACAAGAGAAAATATTCTAA+AGG + chr8_2:22770576-22770595 None:intergenic 20.0%
!! TCAAGTGTTATATATTGAAT+GGG + chr8_2:22770672-22770691 None:intergenic 20.0%
!! TTCAAGTGTTATATATTGAA+TGG + chr8_2:22770673-22770692 None:intergenic 20.0%
!! AAACGATACTTATAAACTAA+AGG + chr8_2:22770703-22770722 None:intergenic 20.0%
!!! AGAAGTTTTAAATAGTTTAG+AGG - chr8_2:22770967-22770986 Msa1240330:intron 20.0%
!!! GAAGTTTTAAATAGTTTAGA+GGG - chr8_2:22770968-22770987 Msa1240330:intron 20.0%
!! ATATTCCAAAAATAAAAGCA+GGG + chr8_2:22771353-22771372 None:intergenic 20.0%
!! TATATTCCAAAAATAAAAGC+AGG + chr8_2:22771354-22771373 None:intergenic 20.0%
!!! GTATTTCATTTTATCATTTG+TGG - chr8_2:22771473-22771492 Msa1240330:intron 20.0%
!! AAAAGATAAAAATTCAAGAC+AGG + chr8_2:22771527-22771546 None:intergenic 20.0%
!! CAAACAGTCATAATAATTAT+TGG - chr8_2:22771894-22771913 Msa1240330:intron 20.0%
!! AGAATTTCAGTTATAAAAGA+GGG - chr8_2:22771978-22771997 Msa1240330:intron 20.0%
!! ATGAAAAACAGAAAATTGAA+AGG + chr8_2:22772114-22772133 None:intergenic 20.0%
!! TAATACACAAAATCTTACAA+AGG + chr8_2:22772326-22772345 None:intergenic 20.0%
!!! TTTGTAAGATTTTGTGTATT+AGG - chr8_2:22772325-22772344 Msa1240330:intron 20.0%
!!! TCCTTAATAGTTATCTTTTA+AGG - chr8_2:22772947-22772966 Msa1240330:intron 20.0%
!! TCCTTAAAAGATAACTATTA+AGG + chr8_2:22772951-22772970 None:intergenic 20.0%
!!! TCTATAAGCTTTATTAGTAT+AGG - chr8_2:22773173-22773192 Msa1240330:intron 20.0%
!!! CTATAAGCTTTATTAGTATA+GGG - chr8_2:22773174-22773193 Msa1240330:intron 20.0%
!!! GCTATTATATTATTTTGGTT+GGG + chr8_2:22774222-22774241 None:intergenic 20.0%
!!! TGCTATTATATTATTTTGGT+TGG + chr8_2:22774223-22774242 None:intergenic 20.0%
!! AATTCTCATTATATATGTTC+TGG - chr8_2:22774296-22774315 Msa1240330:CDS 20.0%
!! TCTTTATCAAAATCATGTTA+GGG - chr8_2:22775065-22775084 Msa1240330:intron 20.0%
!!! TTGTTTTATTTGTATTTGTC+AGG - chr8_2:22776206-22776225 Msa1240330:intron 20.0%
!! AATTCAATATCAAATAGAGA+TGG - chr8_2:22776255-22776274 Msa1240330:intron 20.0%
!! AATAGAGATGGAATATTTAA+AGG - chr8_2:22776267-22776286 Msa1240330:intron 20.0%
!!! GTTTTAAGTTCTGTATATAT+TGG - chr8_2:22776704-22776723 Msa1240330:five_prime_UTR 20.0%
!!! TTTTTTTACCGTAAATGAGT+TGG - chr8_2:22769280-22769299 Msa1240330:CDS 25.0%
! TTTCTTGGAAAGATTATGTT+TGG - chr8_2:22769423-22769442 Msa1240330:CDS 25.0%
! ATATTGCTTATAATTGAGAC+CGG + chr8_2:22769569-22769588 None:intergenic 25.0%
! CATTGAATAACTAATGTATC+TGG + chr8_2:22769643-22769662 None:intergenic 25.0%
!! GTTTGTTTGTTGCTTATATT+TGG - chr8_2:22769675-22769694 Msa1240330:CDS 25.0%
!!! ACATTTTCATAAGCTTTTTC+CGG + chr8_2:22769764-22769783 None:intergenic 25.0%
! AATAATATAAAAGGCCTGTT+TGG + chr8_2:22769860-22769879 None:intergenic 25.0%
! CACATTTCCAAAAAAAAACA+GGG + chr8_2:22769958-22769977 None:intergenic 25.0%
! ACACATTTCCAAAAAAAAAC+AGG + chr8_2:22769959-22769978 None:intergenic 25.0%
!!! GTTTTTTTTTGGAAATGTGT+TGG - chr8_2:22769959-22769978 Msa1240330:CDS 25.0%
! CTAAAAACACAAAAAATGGT+GGG - chr8_2:22770418-22770437 Msa1240330:CDS 25.0%
! AAACTTAAGTTATCAAGTGA+TGG - chr8_2:22770887-22770906 Msa1240330:CDS 25.0%
! TTTCAAGAATCGATCAATAA+GGG + chr8_2:22771083-22771102 None:intergenic 25.0%
! AGATCAAAATGTCATAGATT+TGG - chr8_2:22771138-22771157 Msa1240330:intron 25.0%
! CTGAATCAATTATAACAACA+GGG + chr8_2:22771231-22771250 None:intergenic 25.0%
! TCTGAATCAATTATAACAAC+AGG + chr8_2:22771232-22771251 None:intergenic 25.0%
!!! CTTACAATCATTTTTAATGC+AGG + chr8_2:22771325-22771344 None:intergenic 25.0%
!!! TTTTAAGGATTACAAAAGCA+GGG + chr8_2:22771399-22771418 None:intergenic 25.0%
!!! TTTTTAAGGATTACAAAAGC+AGG + chr8_2:22771400-22771419 None:intergenic 25.0%
!! AGCAAAACAGTAAATGATTT+TGG + chr8_2:22771609-22771628 None:intergenic 25.0%
! CCAGAAATTGTATATTGTAA+TGG + chr8_2:22771645-22771664 None:intergenic 25.0%
! CCATTACAATATACAATTTC+TGG - chr8_2:22771642-22771661 Msa1240330:CDS 25.0%
! TACATAAATACAAAGCAACA+AGG + chr8_2:22771670-22771689 None:intergenic 25.0%
! CATAGGAGTAAAGAAAAAAA+AGG + chr8_2:22771773-22771792 None:intergenic 25.0%
! GAGAATTTCAGTTATAAAAG+AGG - chr8_2:22771977-22771996 Msa1240330:intron 25.0%
! GAATTTCAGTTATAAAAGAG+GGG - chr8_2:22771979-22771998 Msa1240330:intron 25.0%
! AATTTCAGTTATAAAAGAGG+GGG - chr8_2:22771980-22771999 Msa1240330:intron 25.0%
!!! TATTGATGAACTTTTTCCAT+AGG - chr8_2:22772272-22772291 Msa1240330:intron 25.0%
!!! ATTGATGAACTTTTTCCATA+GGG - chr8_2:22772273-22772292 Msa1240330:intron 25.0%
!! AATATTCCTTTTCCCATTTT+GGG + chr8_2:22772505-22772524 None:intergenic 25.0%
!! TAATATTCCTTTTCCCATTT+TGG + chr8_2:22772506-22772525 None:intergenic 25.0%
!!! AAAGATAAAGGTGTTTATCT+TGG - chr8_2:22772718-22772737 Msa1240330:CDS 25.0%
! TATTAGTATAGGGTATATGT+AGG - chr8_2:22773184-22773203 Msa1240330:intron 25.0%
!! AATAGCTTGTATACATATCT+TGG - chr8_2:22773414-22773433 Msa1240330:intron 25.0%
!!! AATTTAACTCTAAGAGCATT+TGG - chr8_2:22773438-22773457 Msa1240330:intron 25.0%
! CTTGTATTGAAACTCAAATA+TGG + chr8_2:22773779-22773798 None:intergenic 25.0%
!! CATATTTGAGTTTCAATACA+AGG - chr8_2:22773777-22773796 Msa1240330:intron 25.0%
! TGTCTTAAAATTAGATGCAT+AGG - chr8_2:22774042-22774061 Msa1240330:CDS 25.0%
!! ATAGGTTGAATATTTCAACA+AGG - chr8_2:22774060-22774079 Msa1240330:CDS 25.0%
!!! TTCAGTTTTGTAAAACATTC+AGG - chr8_2:22774181-22774200 Msa1240330:CDS 25.0%
! ATATTTGTGATACTTGTAGT+TGG - chr8_2:22774323-22774342 Msa1240330:CDS 25.0%
! TATTTGTGATACTTGTAGTT+GGG - chr8_2:22774324-22774343 Msa1240330:CDS 25.0%
! AACCTTCAACAAAATTGATA+CGG + chr8_2:22774389-22774408 None:intergenic 25.0%
!! CAATTTTGTTGAAGGTTAAA+AGG - chr8_2:22774392-22774411 Msa1240330:CDS 25.0%
!!! AACAAAAGTATCCTTTTCTT+AGG - chr8_2:22774850-22774869 Msa1240330:intron 25.0%
! ATTACTATTATCACACACAA+TGG + chr8_2:22774893-22774912 None:intergenic 25.0%
!! TCATCTAAAATGAGAATTGA+GGG + chr8_2:22774958-22774977 None:intergenic 25.0%
!! TCAATTCTCATTTTAGATGA+GGG - chr8_2:22774958-22774977 Msa1240330:intron 25.0%
! ATATCTGTATTCTCATTTCT+TGG + chr8_2:22774991-22775010 None:intergenic 25.0%
! AAGAAATGAGAATACAGATA+TGG - chr8_2:22774990-22775009 Msa1240330:intron 25.0%
! CTCTTTATCAAAATCATGTT+AGG - chr8_2:22775064-22775083 Msa1240330:intron 25.0%
!! GTTTCCATCTTTAAAAACTT+CGG + chr8_2:22775120-22775139 None:intergenic 25.0%
!!! CAACTTTCCTTTTAAAATCT+GGG + chr8_2:22775236-22775255 None:intergenic 25.0%
!! AAGTTCAAATTTTCTTCTGT+AGG - chr8_2:22775417-22775436 Msa1240330:intron 25.0%
!!! TCTATTGCCTTTGAAATATT+TGG - chr8_2:22775632-22775651 Msa1240330:intron 25.0%
! AACCTTTCCAAATATTTCAA+AGG + chr8_2:22775642-22775661 None:intergenic 25.0%
! TTTGAATGGAATGAATATTG+TGG - chr8_2:22776014-22776033 Msa1240330:intron 25.0%
! TGCAAAAAGGTAAATAAAAG+TGG + chr8_2:22776148-22776167 None:intergenic 25.0%
!! TTTTCGTATGATATGCAAAA+AGG + chr8_2:22776161-22776180 None:intergenic 25.0%
!!! GTTTTTTTTCCCTTCTTCTT+TGG + chr8_2:22768775-22768794 None:intergenic 30.0%
! TTTTCGCATAGTATCATCAA+TGG - chr8_2:22768949-22768968 Msa1240330:three_prime_UTR 30.0%
! AGTATCATCAATGGATTCAT+CGG - chr8_2:22768958-22768977 Msa1240330:three_prime_UTR 30.0%
ATGAAGAATGATATACCATC+TGG + chr8_2:22769013-22769032 None:intergenic 30.0%
! ATAAGGTGTTCATCAAAACA+GGG + chr8_2:22769449-22769468 None:intergenic 30.0%
! AATAAGGTGTTCATCAAAAC+AGG + chr8_2:22769450-22769469 None:intergenic 30.0%
TGTGCTATAAACTGCAAATA+AGG + chr8_2:22769466-22769485 None:intergenic 30.0%
! CATTGATTAACCGATGTATT+TGG - chr8_2:22769604-22769623 Msa1240330:CDS 30.0%
GTCATATAGACCAAATACAT+CGG + chr8_2:22769617-22769636 None:intergenic 30.0%
! ATGTTATACGGTCTATGTTT+TGG - chr8_2:22769886-22769905 Msa1240330:CDS 30.0%
AATGACAAAATGACTCAAGT+CGG - chr8_2:22770072-22770091 Msa1240330:CDS 30.0%
AATCCTGTGTTATGAAATGT+TGG - chr8_2:22770327-22770346 Msa1240330:CDS 30.0%
!!! TTTTTGTGTTTTTAGCAGGA+AGG + chr8_2:22770413-22770432 None:intergenic 30.0%
!!! CCATTTTTTGTGTTTTTAGC+AGG + chr8_2:22770417-22770436 None:intergenic 30.0%
CCTGCTAAAAACACAAAAAA+TGG - chr8_2:22770414-22770433 Msa1240330:CDS 30.0%
GCTAAAAACACAAAAAATGG+TGG - chr8_2:22770417-22770436 Msa1240330:CDS 30.0%
! TACTTGTAATTAGCTTCCTT+AGG - chr8_2:22770598-22770617 Msa1240330:CDS 30.0%
TGAAGCAAAATATGCCTTAA+TGG - chr8_2:22770795-22770814 Msa1240330:CDS 30.0%
GAAGCAAAATATGCCTTAAT+GGG - chr8_2:22770796-22770815 Msa1240330:CDS 30.0%
! TAATCCATTTCATTTTCTCC+AGG - chr8_2:22770839-22770858 Msa1240330:CDS 30.0%
AATACCTGGAGAAAATGAAA+TGG + chr8_2:22770846-22770865 None:intergenic 30.0%
AAAACTTCTGTGATTGCATA+CGG + chr8_2:22770956-22770975 None:intergenic 30.0%
!! GTTTTAAATAGTTTAGAGGG+TGG - chr8_2:22770971-22770990 Msa1240330:intron 30.0%
!!! TTGCATTTTTCGGGTTATAA+GGG + chr8_2:22771029-22771048 None:intergenic 30.0%
TAGGATATTTAGCAAAGTAG+GGG + chr8_2:22771060-22771079 None:intergenic 30.0%
GTAGGATATTTAGCAAAGTA+GGG + chr8_2:22771061-22771080 None:intergenic 30.0%
CTTTCAAGAATCGATCAATA+AGG + chr8_2:22771084-22771103 None:intergenic 30.0%
! TATTGATCGATTCTTGAAAG+TGG - chr8_2:22771084-22771103 Msa1240330:intron 30.0%
AAATGTCATAGATTTGGATG+AGG - chr8_2:22771144-22771163 Msa1240330:intron 30.0%
! TGTTATAATTGATTCAGACG+AGG - chr8_2:22771234-22771253 Msa1240330:intron 30.0%
!! ATGAAGTTGTTTTGCCAAAA+CGG - chr8_2:22771293-22771312 Msa1240330:intron 30.0%
!!! CAGTAAATGATTTTGGAACT+GGG + chr8_2:22771602-22771621 None:intergenic 30.0%
!!! ACAGTAAATGATTTTGGAAC+TGG + chr8_2:22771603-22771622 None:intergenic 30.0%
GTAAAGAAAAAAAAGGAAGG+TGG + chr8_2:22771766-22771785 None:intergenic 30.0%
GGAGTAAAGAAAAAAAAGGA+AGG + chr8_2:22771769-22771788 None:intergenic 30.0%
ATTTCAGTTATAAAAGAGGG+GGG - chr8_2:22771981-22772000 Msa1240330:intron 30.0%
AAAGTTGCTAAGAGTTGTTT+AGG - chr8_2:22772026-22772045 Msa1240330:intron 30.0%
!! ACAGTGTTACTTTCAAATCT+TGG - chr8_2:22772168-22772187 Msa1240330:intron 30.0%
!! CAGTGTTACTTTCAAATCTT+GGG - chr8_2:22772169-22772188 Msa1240330:intron 30.0%
!! AGTGTTACTTTCAAATCTTG+GGG - chr8_2:22772170-22772189 Msa1240330:intron 30.0%
TGAAAGACGAACAATATACA+AGG - chr8_2:22772227-22772246 Msa1240330:intron 30.0%
! ATGCAATTTGTTTCTTGAGA+AGG - chr8_2:22772399-22772418 Msa1240330:intron 30.0%
! ATATTCCTTTTCCCATTTTG+GGG + chr8_2:22772504-22772523 None:intergenic 30.0%
AAGAATTGTTGCAAGAGAAT+AGG + chr8_2:22772555-22772574 None:intergenic 30.0%
TCTTGCAACAATTCTTTACA+GGG - chr8_2:22772559-22772578 Msa1240330:CDS 30.0%
AAACACCTTTATCTTTCCTT+GGG + chr8_2:22772714-22772733 None:intergenic 30.0%
TAAACACCTTTATCTTTCCT+TGG + chr8_2:22772715-22772734 None:intergenic 30.0%
!! CAATAGAAACTTCTAAAGTG+CGG - chr8_2:22772818-22772837 Msa1240330:intron 30.0%
TTGTTAGTGTTCACTGAAAA+TGG - chr8_2:22773142-22773161 Msa1240330:intron 30.0%
GTATATGTAGGTATATATGC+TGG - chr8_2:22773196-22773215 Msa1240330:intron 30.0%
AATGCAAATTCACATATCTC+AGG + chr8_2:22773486-22773505 None:intergenic 30.0%
! AGTATCTCTTAGAGTTCTTT+TGG - chr8_2:22773592-22773611 Msa1240330:intron 30.0%
! GTATCTCTTAGAGTTCTTTT+GGG - chr8_2:22773593-22773612 Msa1240330:intron 30.0%
!! TTTGTTCTAAAAGACGATCT+TGG - chr8_2:22773709-22773728 Msa1240330:intron 30.0%
!!! GCGTTGAGTTTTAAAGTTTT+TGG - chr8_2:22773866-22773885 Msa1240330:intron 30.0%
CCAAAAAAACATTCATGCAT+AGG + chr8_2:22773970-22773989 None:intergenic 30.0%
!!! CCTATGCATGAATGTTTTTT+TGG - chr8_2:22773967-22773986 Msa1240330:intron 30.0%
TTAAATAATCTCCTCTGTTG+TGG - chr8_2:22774131-22774150 Msa1240330:CDS 30.0%
TAAATAATCTCCTCTGTTGT+GGG - chr8_2:22774132-22774151 Msa1240330:CDS 30.0%
TAGCACATTAGGACATATTA+TGG - chr8_2:22774238-22774257 Msa1240330:CDS 30.0%
ATTTGTGATACTTGTAGTTG+GGG - chr8_2:22774325-22774344 Msa1240330:CDS 30.0%
! TACCGTATCAATTTTGTTGA+AGG - chr8_2:22774384-22774403 Msa1240330:CDS 30.0%
! AGTTTCATGCAAAGTTTTCT+AGG - chr8_2:22774658-22774677 Msa1240330:intron 30.0%
ACTGTTTGTATCCTAAGAAA+AGG + chr8_2:22774864-22774883 None:intergenic 30.0%
GAACTTTAAGCAATATCTCT+TGG + chr8_2:22774936-22774955 None:intergenic 30.0%
! CTCATCTAAAATGAGAATTG+AGG + chr8_2:22774959-22774978 None:intergenic 30.0%
! CTCAATTCTCATTTTAGATG+AGG - chr8_2:22774957-22774976 Msa1240330:intron 30.0%
! TTTTCTAGGTGTTTGTACTT+TGG + chr8_2:22775028-22775047 None:intergenic 30.0%
TTATCAAAATCATGTTAGGG+AGG - chr8_2:22775068-22775087 Msa1240330:intron 30.0%
!!! GCAACTTTCCTTTTAAAATC+TGG + chr8_2:22775237-22775256 None:intergenic 30.0%
AAAGTTCTTCACTACTACAA+AGG - chr8_2:22775288-22775307 Msa1240330:intron 30.0%
TTCCATATCTGATCATATCA+TGG - chr8_2:22775497-22775516 Msa1240330:intron 30.0%
ATCCATGATATGATCAGATA+TGG + chr8_2:22775502-22775521 None:intergenic 30.0%
!! TGCCTTTGAAATATTTGGAA+AGG - chr8_2:22775637-22775656 Msa1240330:intron 30.0%
AAAGAAATCTTCGTGATTTC+AGG - chr8_2:22775693-22775712 Msa1240330:intron 30.0%
!! CCAAAAAATATTTTTGCCTC+GGG + chr8_2:22775771-22775790 None:intergenic 30.0%
!! GCCAAAAAATATTTTTGCCT+CGG + chr8_2:22775772-22775791 None:intergenic 30.0%
AGGAGTTAATCTCAAAAATG+TGG - chr8_2:22775991-22776010 Msa1240330:intron 30.0%
TCTCAAAAATGTGGTTTGAA+TGG - chr8_2:22776000-22776019 Msa1240330:intron 30.0%
ACGTAAAAGCTCTGTATAAA+AGG - chr8_2:22776117-22776136 Msa1240330:intron 30.0%
CCTAGAACTAAAAAACTACA+AGG + chr8_2:22776313-22776332 None:intergenic 30.0%
!!! CCTTGTAGTTTTTTAGTTCT+AGG - chr8_2:22776310-22776329 Msa1240330:intron 30.0%
!!! TGATTACTTTTTCTCTGTCT+AGG - chr8_2:22776364-22776383 Msa1240330:CDS 30.0%
AACATACAGTGAACTGTTTA+GGG - chr8_2:22776575-22776594 Msa1240330:five_prime_UTR 30.0%
AAACGCACATTTAAGCCATT+TGG - chr8_2:22768713-22768732 Msa1240330:three_prime_UTR 35.0%
GTAGTGGTTAAGTATGTGTT+TGG + chr8_2:22768747-22768766 None:intergenic 35.0%
! TTCTTCTTTGGAAATGGTAG+TGG + chr8_2:22768763-22768782 None:intergenic 35.0%
ACTACCATTTCCAAAGAAGA+AGG - chr8_2:22768762-22768781 Msa1240330:three_prime_UTR 35.0%
CTACCATTTCCAAAGAAGAA+GGG - chr8_2:22768763-22768782 Msa1240330:three_prime_UTR 35.0%
! TTTCCCTTCTTCTTTGGAAA+TGG + chr8_2:22768769-22768788 None:intergenic 35.0%
GAAGGAGAAGAGTGAAATTA+GGG + chr8_2:22768838-22768857 None:intergenic 35.0%
TGAAGGAGAAGAGTGAAATT+AGG + chr8_2:22768839-22768858 None:intergenic 35.0%
ATAAGGCATGGTTGTTGATA+AGG - chr8_2:22769371-22769390 Msa1240330:CDS 35.0%
!!! TTGTTTTTGTTTACTCCCTC+CGG - chr8_2:22769547-22769566 Msa1240330:CDS 35.0%
! TTGTTGCTTATATTTGGGAC+TGG - chr8_2:22769681-22769700 Msa1240330:CDS 35.0%
!! TTGGGAGAACTTTTGAAAAC+AGG + chr8_2:22769792-22769811 None:intergenic 35.0%
!!! CATAAGTTTTGAGGCTGTTT+GGG + chr8_2:22769810-22769829 None:intergenic 35.0%
! ATCTACTGGCATAAGTTTTG+AGG + chr8_2:22769819-22769838 None:intergenic 35.0%
GCTTACTTGAGTATATCTAC+TGG + chr8_2:22769833-22769852 None:intergenic 35.0%
TATAAAAGGCCTGTTTGGAT+TGG + chr8_2:22769855-22769874 None:intergenic 35.0%
!! TTGAGTCATTTTGTCATTGG+AGG + chr8_2:22770070-22770089 None:intergenic 35.0%
!! GACTTGAGTCATTTTGTCAT+TGG + chr8_2:22770073-22770092 None:intergenic 35.0%
AAGCAATCCACTTGTTTAGA+CGG - chr8_2:22770153-22770172 Msa1240330:CDS 35.0%
ATCAAAGTGGTATACACTCA+AGG + chr8_2:22770353-22770372 None:intergenic 35.0%
!! ACCACTTTGATTTGATTCTG+TGG - chr8_2:22770362-22770381 Msa1240330:CDS 35.0%
!! CCACTTTGATTTGATTCTGT+GGG - chr8_2:22770363-22770382 Msa1240330:CDS 35.0%
!! CACTTTGATTTGATTCTGTG+GGG - chr8_2:22770364-22770383 Msa1240330:CDS 35.0%
AGCTCGTCAATCCATATAAA+CGG + chr8_2:22770478-22770497 None:intergenic 35.0%
CATGATACAAATGCCCATTA+AGG + chr8_2:22770812-22770831 None:intergenic 35.0%
! AGAATATGGTAGTGTGACAA+AGG - chr8_2:22770994-22771013 Msa1240330:intron 35.0%
!!! CTTGCATTTTTCGGGTTATA+AGG + chr8_2:22771030-22771049 None:intergenic 35.0%
ACCCGAAAAATGCAAGTATT+AGG - chr8_2:22771034-22771053 Msa1240330:intron 35.0%
! GCCTAATACTTGCATTTTTC+GGG + chr8_2:22771038-22771057 None:intergenic 35.0%
! GGCCTAATACTTGCATTTTT+CGG + chr8_2:22771039-22771058 None:intergenic 35.0%
GGTAGGATATTTAGCAAAGT+AGG + chr8_2:22771062-22771081 None:intergenic 35.0%
AAGAATCGATCAATAAGGGT+AGG + chr8_2:22771079-22771098 None:intergenic 35.0%
!! CTATGACATTTTGATCTGAG+TGG + chr8_2:22771135-22771154 None:intergenic 35.0%
TGGATGAGGAACAAATTCAA+AGG - chr8_2:22771158-22771177 Msa1240330:intron 35.0%
GGATGAGGAACAAATTCAAA+GGG - chr8_2:22771159-22771178 Msa1240330:intron 35.0%
! GGAACATCCTTTTCTCTTTT+TGG + chr8_2:22771196-22771215 None:intergenic 35.0%
TCAATTATAACAACAGGGCA+TGG + chr8_2:22771226-22771245 None:intergenic 35.0%
! TATAATTGATTCAGACGAGG+AGG - chr8_2:22771237-22771256 Msa1240330:intron 35.0%
!!! CTTTGCCCTGCTTTTATTTT+TGG - chr8_2:22771345-22771364 Msa1240330:intron 35.0%
GGGATATACAACCCAAATAA+AGG + chr8_2:22771427-22771446 None:intergenic 35.0%
! AGACAAAAGGTGCAACATTT+AGG + chr8_2:22771572-22771591 None:intergenic 35.0%
AAAGGAAGGTGGAAATAACA+TGG + chr8_2:22771755-22771774 None:intergenic 35.0%
TTCTTAATGACTAACCCTCT+AGG + chr8_2:22771957-22771976 None:intergenic 35.0%
TGTTCGTCTTTCAACAACTA+TGG + chr8_2:22772220-22772239 None:intergenic 35.0%
TTGTTGCAAGAGAATAGGAA+AGG + chr8_2:22772550-22772569 None:intergenic 35.0%
CTCTTGCAACAATTCTTTAC+AGG - chr8_2:22772558-22772577 Msa1240330:CDS 35.0%
CTTTCTCCATTGTAAGCATT+GGG + chr8_2:22772595-22772614 None:intergenic 35.0%
ACTTTCTCCATTGTAAGCAT+TGG + chr8_2:22772596-22772615 None:intergenic 35.0%
CTTTCTCCATAGTATGCATT+AGG + chr8_2:22772649-22772668 None:intergenic 35.0%
TCTTTCCTTGGGTTATCTTT+AGG + chr8_2:22772703-22772722 None:intergenic 35.0%
GATAACCCAAGGAAAGATAA+AGG - chr8_2:22772706-22772725 Msa1240330:CDS 35.0%
! TGTTTATCTTGGTGTACAAG+AGG - chr8_2:22772729-22772748 Msa1240330:CDS 35.0%
ACAAGAGGAAGAAGATAATG+TGG - chr8_2:22772744-22772763 Msa1240330:CDS 35.0%
TCATCTTCCTTGTTCAGATA+AGG - chr8_2:22772983-22773002 Msa1240330:intron 35.0%
CATCTTCCTTGTTCAGATAA+GGG - chr8_2:22772984-22773003 Msa1240330:intron 35.0%
ATCTTCCTTGTTCAGATAAG+GGG - chr8_2:22772985-22773004 Msa1240330:intron 35.0%
ATAAGGGGGAAATGGAAAAA+TGG - chr8_2:22773000-22773019 Msa1240330:intron 35.0%
TAAGGGGGAAATGGAAAAAT+GGG - chr8_2:22773001-22773020 Msa1240330:intron 35.0%
!!! TGGAAAAATGGGCTATTTTG+TGG - chr8_2:22773012-22773031 Msa1240330:intron 35.0%
!!! GGAAAAATGGGCTATTTTGT+GGG - chr8_2:22773013-22773032 Msa1240330:intron 35.0%
!!! GAAAAATGGGCTATTTTGTG+GGG - chr8_2:22773014-22773033 Msa1240330:intron 35.0%
!!! AAAAATGGGCTATTTTGTGG+GGG - chr8_2:22773015-22773034 Msa1240330:intron 35.0%
AGCATAACAGAGAGAAAGAA+AGG + chr8_2:22773319-22773338 None:intergenic 35.0%
ATCTTCTTCCTCTTCTTCTT+CGG + chr8_2:22773671-22773690 None:intergenic 35.0%
GATATGTTTGTCGTGTTTGT+GGG - chr8_2:22773731-22773750 Msa1240330:intron 35.0%
ATATGTTTGTCGTGTTTGTG+GGG - chr8_2:22773732-22773751 Msa1240330:intron 35.0%
!!! TCTATGCACGAATGCTTTTT+TGG - chr8_2:22773811-22773830 Msa1240330:intron 35.0%
ATTAGGACATATTATGGCCT+GGG - chr8_2:22774244-22774263 Msa1240330:CDS 35.0%
! CTTTTCAAAGCAATTAACCC+AGG + chr8_2:22774264-22774283 None:intergenic 35.0%
!!! AAACGCATCCACTTTTTCTT+TGG + chr8_2:22774452-22774471 None:intergenic 35.0%
AAAGAAAAAGTGGATGCGTT+TGG - chr8_2:22774451-22774470 Msa1240330:CDS 35.0%
GATTGCTGAAGAAGATTTCT+TGG - chr8_2:22774480-22774499 Msa1240330:CDS 35.0%
GAAAGTTGAATCCTTCAACT+TGG + chr8_2:22774555-22774574 None:intergenic 35.0%
ACAGTGTATAGATCATAGAG+CGG + chr8_2:22774778-22774797 None:intergenic 35.0%
CTATGATCTATACACTGTGA+AGG - chr8_2:22774780-22774799 Msa1240330:intron 35.0%
!! AACTGGAGGTGTTAAAACAA+TGG - chr8_2:22774821-22774840 Msa1240330:intron 35.0%
! CCAGACAATACAACTTTTCT+AGG + chr8_2:22775042-22775061 None:intergenic 35.0%
CCTAGAAAAGTTGTATTGTC+TGG - chr8_2:22775039-22775058 Msa1240330:intron 35.0%
TCAATGTTCTCAATCTTGTG+AGG - chr8_2:22775094-22775113 Msa1240330:intron 35.0%
GGTTGAGAATACATTACAGA+AGG - chr8_2:22775209-22775228 Msa1240330:intron 35.0%
! AGAAGGACCCAGATTTTAAA+AGG - chr8_2:22775226-22775245 Msa1240330:intron 35.0%
GTAGTAGTGAAGAACTTTAC+TGG + chr8_2:22775286-22775305 None:intergenic 35.0%
TCATCACATTTCTCTGCAAT+TGG + chr8_2:22775474-22775493 None:intergenic 35.0%
! TGAACAGAGAGAGTTTTCAA+TGG - chr8_2:22775728-22775747 Msa1240330:intron 35.0%
!!! CCCGAGGCAAAAATATTTTT+TGG - chr8_2:22775768-22775787 Msa1240330:intron 35.0%
! AAGACTTTCTTTTTCTGTCC+TGG + chr8_2:22775909-22775928 None:intergenic 35.0%
TCACCATACTTGTTTCAAGA+AGG - chr8_2:22775971-22775990 Msa1240330:intron 35.0%
ACTCCTTCTTGAAACAAGTA+TGG + chr8_2:22775977-22775996 None:intergenic 35.0%
ACACTTGATGTGAAAGAATG+TGG - chr8_2:22776059-22776078 Msa1240330:intron 35.0%
TGTATTTGTCAGGTAACATG+TGG - chr8_2:22776216-22776235 Msa1240330:intron 35.0%
GTATTTGTCAGGTAACATGT+GGG - chr8_2:22776217-22776236 Msa1240330:intron 35.0%
TATATCCTGTTCTACTCAAC+AGG - chr8_2:22776339-22776358 Msa1240330:intron 35.0%
! TTTTCTCTGTCTAGGAGTTT+CGG - chr8_2:22776372-22776391 Msa1240330:CDS 35.0%
CAACATACAGTGAACTGTTT+AGG - chr8_2:22776574-22776593 Msa1240330:five_prime_UTR 35.0%
TGTTTGGATTCACGTCCAAA+TGG + chr8_2:22768731-22768750 None:intergenic 40.0%
! GTGAGATTGAGGGAAGATTT+TGG + chr8_2:22768797-22768816 None:intergenic 40.0%
AATCTTCCCTCAATCTCACT+CGG - chr8_2:22768798-22768817 Msa1240330:three_prime_UTR 40.0%
TTGAAACCGAGTGAGATTGA+GGG + chr8_2:22768807-22768826 None:intergenic 40.0%
ATTGAAACCGAGTGAGATTG+AGG + chr8_2:22768808-22768827 None:intergenic 40.0%
TCACTCTTCTCCTTCACAAT+CGG - chr8_2:22768843-22768862 Msa1240330:three_prime_UTR 40.0%
! ATGCATGTTACCGATTGTGA+AGG + chr8_2:22768856-22768875 None:intergenic 40.0%
! ACTAAGTGGTCTTGACTACA+TGG + chr8_2:22769349-22769368 None:intergenic 40.0%
ATGTAGTCAAGACCACTTAG+TGG - chr8_2:22769348-22769367 Msa1240330:CDS 40.0%
! TCAAGACCACTTAGTGGATA+AGG - chr8_2:22769354-22769373 Msa1240330:CDS 40.0%
TGCTTATAATTGAGACCGGA+GGG + chr8_2:22769565-22769584 None:intergenic 40.0%
TTGCTTATAATTGAGACCGG+AGG + chr8_2:22769566-22769585 None:intergenic 40.0%
! TTGCTTATATTTGGGACTGG+TGG - chr8_2:22769684-22769703 Msa1240330:CDS 40.0%
! TGCTTATATTTGGGACTGGT+GGG - chr8_2:22769685-22769704 Msa1240330:CDS 40.0%
!!! GCATAAGTTTTGAGGCTGTT+TGG + chr8_2:22769811-22769830 None:intergenic 40.0%
TCAAGTAAGCCAATCCAAAC+AGG - chr8_2:22769843-22769862 Msa1240330:CDS 40.0%
!!! TGCGCAACCCTGTTTTTTTT+TGG - chr8_2:22769948-22769967 Msa1240330:CDS 40.0%
AGGTCAGGCAGTAACAAAAA+GGG + chr8_2:22769988-22770007 None:intergenic 40.0%
AAGGTCAGGCAGTAACAAAA+AGG + chr8_2:22769989-22770008 None:intergenic 40.0%
!! GTAAAAAGGAGTGGACTGAA+AGG + chr8_2:22770008-22770027 None:intergenic 40.0%
! AAATGACTCAAGTCGGTTTC+AGG - chr8_2:22770079-22770098 Msa1240330:CDS 40.0%
CCTAGAAAGTGAAAAACCCT+CGG + chr8_2:22770109-22770128 None:intergenic 40.0%
AATCCACTTGTTTAGACGGA+GGG - chr8_2:22770157-22770176 Msa1240330:CDS 40.0%
!!! TTTAGACGGAGGGTTTTAGA+GGG - chr8_2:22770167-22770186 Msa1240330:CDS 40.0%
AATTCCTCCAGTGCTTGAAT+TGG - chr8_2:22770288-22770307 Msa1240330:CDS 40.0%
AGGCCAACATTTCATAACAC+AGG + chr8_2:22770333-22770352 None:intergenic 40.0%
CCCACAGAATCAAATCAAAG+TGG + chr8_2:22770366-22770385 None:intergenic 40.0%
GTCAGGATATGGGAACAATT+AGG + chr8_2:22770391-22770410 None:intergenic 40.0%
TGCTGAATGGAGTTGAAAAC+CGG - chr8_2:22770497-22770516 Msa1240330:CDS 40.0%
ACTTAAACATGACGCTACCA+AGG + chr8_2:22770529-22770548 None:intergenic 40.0%
TTCTCCAGGTATTTCATCTG+AGG - chr8_2:22770853-22770872 Msa1240330:CDS 40.0%
AGTTTAGAGGGTGGAGAATA+TGG - chr8_2:22770980-22770999 Msa1240330:intron 40.0%
TAGCGCACCAAAAAGAGAAA+AGG - chr8_2:22771186-22771205 Msa1240330:intron 40.0%
AAGAGAAAAGGATGTTCCTG+CGG - chr8_2:22771198-22771217 Msa1240330:intron 40.0%
!! TTTGGGTTGTATATCCCTTC+TGG - chr8_2:22771430-22771449 Msa1240330:intron 40.0%
! TTGGGTTGTATATCCCTTCT+GGG - chr8_2:22771431-22771450 Msa1240330:intron 40.0%
ACTGGGACACTTAAGACAAA+AGG + chr8_2:22771585-22771604 None:intergenic 40.0%
AACACATGTACAGGAACTCA+GGG + chr8_2:22771808-22771827 None:intergenic 40.0%
AAGTGCAGTTACTGAAGAGA+AGG - chr8_2:22771928-22771947 Msa1240330:intron 40.0%
TTTAGGAGAGAAGTTCTCTC+TGG - chr8_2:22772043-22772062 Msa1240330:intron 40.0%
TCTCCATAGTATGCATTAGG+AGG + chr8_2:22772646-22772665 None:intergenic 40.0%
TTCCTTGGGTTATCTTTAGG+AGG + chr8_2:22772700-22772719 None:intergenic 40.0%
TATTTGGAGGGAGATGTCAA+TGG - chr8_2:22772795-22772814 Msa1240330:intron 40.0%
! AGATTTTTCCCCTACTCGTT+TGG - chr8_2:22772891-22772910 Msa1240330:intron 40.0%
! GATTTTTCCCCTACTCGTTT+GGG - chr8_2:22772892-22772911 Msa1240330:intron 40.0%
AACAATGACCCAAACGAGTA+GGG + chr8_2:22772903-22772922 None:intergenic 40.0%
AAACAATGACCCAAACGAGT+AGG + chr8_2:22772904-22772923 None:intergenic 40.0%
TCTTCCTTGTTCAGATAAGG+GGG - chr8_2:22772986-22773005 Msa1240330:intron 40.0%
ATTTCCCCCTTATCTGAACA+AGG + chr8_2:22772993-22773012 None:intergenic 40.0%
TTGTTCAGATAAGGGGGAAA+TGG - chr8_2:22772992-22773011 Msa1240330:intron 40.0%
ACACCAATTCCTTCTTTCGA+TGG - chr8_2:22773064-22773083 Msa1240330:intron 40.0%
ACTCCATCGAAAGAAGGAAT+TGG + chr8_2:22773070-22773089 None:intergenic 40.0%
GTAACAACTCCATCGAAAGA+AGG + chr8_2:22773076-22773095 None:intergenic 40.0%
ATCTGCAGAAACATCCTAGT+AGG + chr8_2:22773641-22773660 None:intergenic 40.0%
TCTTCTTCCTCTTCTTCTTC+GGG + chr8_2:22773670-22773689 None:intergenic 40.0%
GGATATGTTTGTCGTGTTTG+TGG - chr8_2:22773730-22773749 Msa1240330:intron 40.0%
GTTTGTGGGGTTATTGATAG+AGG - chr8_2:22773745-22773764 Msa1240330:intron 40.0%
TTTGGTTGGGTAAGACTAAG+AGG + chr8_2:22774209-22774228 None:intergenic 40.0%
CATTAGGACATATTATGGCC+TGG - chr8_2:22774243-22774262 Msa1240330:CDS 40.0%
!! TTCTTTGGCTTTCGACGAAT+CGG + chr8_2:22774437-22774456 None:intergenic 40.0%
GTCGAAAGCCAAAGAAAAAG+TGG - chr8_2:22774441-22774460 Msa1240330:CDS 40.0%
TTCATTTGATTAGCATGCCG+AGG + chr8_2:22774526-22774545 None:intergenic 40.0%
! TTGAATCCTTCAACTTGGTG+CGG + chr8_2:22774550-22774569 None:intergenic 40.0%
CAACTTTCTCGTCAGAAACT+TGG - chr8_2:22774567-22774586 Msa1240330:intron 40.0%
TTTCTCGTCAGAAACTTGGT+GGG - chr8_2:22774571-22774590 Msa1240330:intron 40.0%
CAAGTCGACAATATTCCCTT+GGG + chr8_2:22774718-22774737 None:intergenic 40.0%
GGAAGAAAGAGTTTCAAACG+TGG - chr8_2:22774737-22774756 Msa1240330:intron 40.0%
! TTTTAACACCTCCAGTTGCT+GGG + chr8_2:22774818-22774837 None:intergenic 40.0%
AGGTGTTTGTACTTTGGCAA+GGG + chr8_2:22775022-22775041 None:intergenic 40.0%
TAGGTGTTTGTACTTTGGCA+AGG + chr8_2:22775023-22775042 None:intergenic 40.0%
!! GAGGCCGAAGTTTTTAAAGA+TGG - chr8_2:22775113-22775132 Msa1240330:intron 40.0%
TCAACTTCAATCTTCTGCCT+GGG + chr8_2:22775372-22775391 None:intergenic 40.0%
! CTGCAATTGGCTTCAACTTT+GGG + chr8_2:22775461-22775480 None:intergenic 40.0%
! TCTGCAATTGGCTTCAACTT+TGG + chr8_2:22775462-22775481 None:intergenic 40.0%
TGACTCCATCTCTCATATCA+AGG + chr8_2:22775539-22775558 None:intergenic 40.0%
TGAACCTATGTGAATCAGCT+GGG - chr8_2:22775583-22775602 Msa1240330:intron 40.0%
TGAAAACTCTCTCTGTTCAG+CGG + chr8_2:22775727-22775746 None:intergenic 40.0%
GAAGTTTAACAATTCACCCG+AGG - chr8_2:22775752-22775771 Msa1240330:intron 40.0%
! TTTGGCTCAATCAAAGCATG+TGG - chr8_2:22775786-22775805 Msa1240330:intron 40.0%
TCAATCAAAGCATGTGGTGA+AGG - chr8_2:22775792-22775811 Msa1240330:intron 40.0%
CAATCAAAGCATGTGGTGAA+GGG - chr8_2:22775793-22775812 Msa1240330:intron 40.0%
ATGTGGTGAAGGGATTTCAT+TGG - chr8_2:22775803-22775822 Msa1240330:intron 40.0%
! GTGAAGGGATTTCATTGGTT+GGG - chr8_2:22775808-22775827 Msa1240330:intron 40.0%
! TGAAGGGATTTCATTGGTTG+GGG - chr8_2:22775809-22775828 Msa1240330:intron 40.0%
AACATCCAAGATGATGACAC+GGG + chr8_2:22775838-22775857 None:intergenic 40.0%
GAACATCCAAGATGATGACA+CGG + chr8_2:22775839-22775858 None:intergenic 40.0%
TAGCTTGACGAGTAACAGAT+GGG + chr8_2:22775869-22775888 None:intergenic 40.0%
ATAGCTTGACGAGTAACAGA+TGG + chr8_2:22775870-22775889 None:intergenic 40.0%
TCTGTTACTCGTCAAGCTAT+TGG - chr8_2:22775870-22775889 Msa1240330:intron 40.0%
! AAGCTATTGGTCGTGCTTTT+CGG - chr8_2:22775883-22775902 Msa1240330:intron 40.0%
GTGTTTCAACTTCAAATGCG+CGG + chr8_2:22776043-22776062 None:intergenic 40.0%
TTTACGTCTTCCCCTAACAA+CGG + chr8_2:22776104-22776123 None:intergenic 40.0%
TCAATCCTGTTGAGTAGAAC+AGG + chr8_2:22776347-22776366 None:intergenic 40.0%
CTTATTCACAAGTCTTCCTC+AGG - chr8_2:22776417-22776436 Msa1240330:intron 40.0%
AATGACAGTCAATCACAGTG+TGG - chr8_2:22776446-22776465 Msa1240330:intron 40.0%
CAGTTTGCAACTCTCTACAT+TGG + chr8_2:22776520-22776539 None:intergenic 40.0%
ACAGTGAACTGTTTAGGGAT+TGG - chr8_2:22776580-22776599 Msa1240330:five_prime_UTR 40.0%
CAGTGAACTGTTTAGGGATT+GGG - chr8_2:22776581-22776600 Msa1240330:five_prime_UTR 40.0%
! TGGTTGAGTTGCTAAGATGA+AGG - chr8_2:22776724-22776743 Msa1240330:five_prime_UTR 40.0%
! ACCACTTAGTGGATAAGGCA+TGG - chr8_2:22769359-22769378 Msa1240330:CDS 45.0%
ACCATGCCTTATCCACTAAG+TGG + chr8_2:22769363-22769382 None:intergenic 45.0%
! GCATGGTTGTTGATAAGGCA+TGG - chr8_2:22769376-22769395 Msa1240330:CDS 45.0%
GTCGTGCATGTAAAAAGGAG+TGG + chr8_2:22770017-22770036 None:intergenic 45.0%
GAACGGTCGTGCATGTAAAA+AGG + chr8_2:22770022-22770041 None:intergenic 45.0%
TACTACCTCCAACCAGTGAA+CGG + chr8_2:22770039-22770058 None:intergenic 45.0%
! CCGAGGGTTTTTCACTTTCT+AGG - chr8_2:22770106-22770125 Msa1240330:CDS 45.0%
CAATCCACTTGTTTAGACGG+AGG - chr8_2:22770156-22770175 Msa1240330:CDS 45.0%
AAACCCTCCGTCTAAACAAG+TGG + chr8_2:22770163-22770182 None:intergenic 45.0%
!! GTTTAGACGGAGGGTTTTAG+AGG - chr8_2:22770166-22770185 Msa1240330:CDS 45.0%
!!! TTAGACGGAGGGTTTTAGAG+GGG - chr8_2:22770168-22770187 Msa1240330:CDS 45.0%
!!! GAGGGTTTTAGAGGGGAAAT+GGG - chr8_2:22770175-22770194 Msa1240330:CDS 45.0%
GGAAATGGGAACTGAATGAC+TGG - chr8_2:22770189-22770208 Msa1240330:CDS 45.0%
TAGCAGGAAGGTCAGGATAT+GGG + chr8_2:22770401-22770420 None:intergenic 45.0%
TTAGCAGGAAGGTCAGGATA+TGG + chr8_2:22770402-22770421 None:intergenic 45.0%
!!! GTGTTTTTAGCAGGAAGGTC+AGG + chr8_2:22770408-22770427 None:intergenic 45.0%
!! TTGAAAACCGGTGTTGTCCT+TGG - chr8_2:22770509-22770528 Msa1240330:CDS 45.0%
GCATCTGTGCATTCATCCTA+AGG + chr8_2:22770617-22770636 None:intergenic 45.0%
GAATGCACAGATGCACATGT+TGG - chr8_2:22770623-22770642 Msa1240330:CDS 45.0%
GATGCACATGTTGGAACATG+TGG - chr8_2:22770632-22770651 Msa1240330:CDS 45.0%
CCTTCCTCAGATGAAATACC+TGG + chr8_2:22770860-22770879 None:intergenic 45.0%
CCAGGTATTTCATCTGAGGA+AGG - chr8_2:22770857-22770876 Msa1240330:CDS 45.0%
!! ACCTTAGCTTGTGCTGAACA+TGG + chr8_2:22770917-22770936 None:intergenic 45.0%
CTTGAAAGTGGTGACAGATC+AGG - chr8_2:22771096-22771115 Msa1240330:intron 45.0%
ATTCAGACGAGGAGGATGAT+AGG - chr8_2:22771245-22771264 Msa1240330:intron 45.0%
TTCAGACGAGGAGGATGATA+GGG - chr8_2:22771246-22771265 Msa1240330:intron 45.0%
AGGATTACAAAAGCAGGGCA+AGG + chr8_2:22771394-22771413 None:intergenic 45.0%
TGGGTTGTATATCCCTTCTG+GGG - chr8_2:22771432-22771451 Msa1240330:intron 45.0%
TCAGTCAAATGACCCCAGAA+GGG + chr8_2:22771447-22771466 None:intergenic 45.0%
TTCAGTCAAATGACCCCAGA+AGG + chr8_2:22771448-22771467 None:intergenic 45.0%
CAACACATGTACAGGAACTC+AGG + chr8_2:22771809-22771828 None:intergenic 45.0%
CTGAGTTCCTGTACATGTGT+TGG - chr8_2:22771807-22771826 Msa1240330:intron 45.0%
AATTGGGCCAACACATGTAC+AGG + chr8_2:22771817-22771836 None:intergenic 45.0%
! ACATGTGTTGGCCCAATTGT+TGG - chr8_2:22771819-22771838 Msa1240330:intron 45.0%
! CATGTGTTGGCCCAATTGTT+GGG - chr8_2:22771820-22771839 Msa1240330:intron 45.0%
AAGCTGTGCTTGTGTGGATT+GGG + chr8_2:22771846-22771865 None:intergenic 45.0%
TTCAAGAAGCTGTGCTTGTG+TGG + chr8_2:22771852-22771871 None:intergenic 45.0%
TTGAAGCCAGTAGAAGCTGT+GGG - chr8_2:22771867-22771886 Msa1240330:intron 45.0%
TGTATTCCCACAGCTTCTAC+TGG + chr8_2:22771876-22771895 None:intergenic 45.0%
TGAAGAGAAGGAAGCCTAGA+GGG - chr8_2:22771940-22771959 Msa1240330:intron 45.0%
AGAGAAGTTCTCTCTGGTCT+AGG - chr8_2:22772049-22772068 Msa1240330:intron 45.0%
TGGGGTTCTATCAGATGCTA+TGG - chr8_2:22772188-22772207 Msa1240330:intron 45.0%
TGAGCATCTAACGATCCCTA+TGG + chr8_2:22772291-22772310 None:intergenic 45.0%
! AAAGCCTTTTCCCACTACGT+GGG + chr8_2:22772457-22772476 None:intergenic 45.0%
TATCTAGCCGACCCCAAAAT+GGG - chr8_2:22772490-22772509 Msa1240330:intron 45.0%
!!! TCCTTTTCCCATTTTGGGGT+CGG + chr8_2:22772500-22772519 None:intergenic 45.0%
CATCCTCCCAATGCTTACAA+TGG - chr8_2:22772586-22772605 Msa1240330:CDS 45.0%
!! TCTCCATTGTAAGCATTGGG+AGG + chr8_2:22772592-22772611 None:intergenic 45.0%
CTGCCTCCTAATGCATACTA+TGG - chr8_2:22772640-22772659 Msa1240330:CDS 45.0%
TGCATACTATGGAGAAAGCG+CGG - chr8_2:22772651-22772670 Msa1240330:CDS 45.0%
TGCCTCCTAAAGATAACCCA+AGG - chr8_2:22772695-22772714 Msa1240330:CDS 45.0%
! GTGGTTGATGCTGAAGATGA+CGG - chr8_2:22772763-22772782 Msa1240330:CDS 45.0%
! TGGTTGATGCTGAAGATGAC+GGG - chr8_2:22772764-22772783 Msa1240330:CDS 45.0%
!! ATGACGGGCTAGAGGATATT+TGG - chr8_2:22772779-22772798 Msa1240330:intron 45.0%
ACAATGACCCAAACGAGTAG+GGG + chr8_2:22772902-22772921 None:intergenic 45.0%
!! TGAAGGTTAAAAGGAGCACC+AGG - chr8_2:22774401-22774420 Msa1240330:CDS 45.0%
CGAATCGGACATATAAGTCC+TGG + chr8_2:22774422-22774441 None:intergenic 45.0%
TTGATTAGCATGCCGAGGAT+GGG + chr8_2:22774521-22774540 None:intergenic 45.0%
TTTGATTAGCATGCCGAGGA+TGG + chr8_2:22774522-22774541 None:intergenic 45.0%
! ATGAAACCGCACCAAGTTGA+AGG - chr8_2:22774541-22774560 Msa1240330:intron 45.0%
CTTTCTCGTCAGAAACTTGG+TGG - chr8_2:22774570-22774589 Msa1240330:intron 45.0%
ATGAAAGTCTTTCCCGATCC+TGG + chr8_2:22774631-22774650 None:intergenic 45.0%
CCAAGTCGACAATATTCCCT+TGG + chr8_2:22774719-22774738 None:intergenic 45.0%
! CCAAGGGAATATTGTCGACT+TGG - chr8_2:22774716-22774735 Msa1240330:intron 45.0%
AGAGTTTCAAACGTGGCAAG+TGG - chr8_2:22774744-22774763 Msa1240330:intron 45.0%
!! GTTTTAACACCTCCAGTTGC+TGG + chr8_2:22774819-22774838 None:intergenic 45.0%
AGCGTTTCACGCTAGGTATA+TGG + chr8_2:22775179-22775198 None:intergenic 45.0%
CGTGAAACGCTTTGACGATT+TGG - chr8_2:22775188-22775207 Msa1240330:intron 45.0%
! GATTTTCTTGACGAGCTTCC+TGG - chr8_2:22775312-22775331 Msa1240330:intron 45.0%
CTCAACTTCAATCTTCTGCC+TGG + chr8_2:22775373-22775392 None:intergenic 45.0%
GCAGACCTTGATATGAGAGA+TGG - chr8_2:22775531-22775550 Msa1240330:intron 45.0%
CTGAACCTATGTGAATCAGC+TGG - chr8_2:22775582-22775601 Msa1240330:intron 45.0%
GAACCTATGTGAATCAGCTG+GGG - chr8_2:22775584-22775603 Msa1240330:intron 45.0%
! TTTCCCCAGCTGATTCACAT+AGG + chr8_2:22775590-22775609 None:intergenic 45.0%
ATCAGCTGGGGAAAAACTTC+TGG - chr8_2:22775596-22775615 Msa1240330:intron 45.0%
! TGGAAAGGTTAGCCATGAAG+TGG - chr8_2:22775652-22775671 Msa1240330:intron 45.0%
! AAGGTTAGCCATGAAGTGGA+AGG - chr8_2:22775656-22775675 Msa1240330:intron 45.0%
! AGGTTAGCCATGAAGTGGAA+GGG - chr8_2:22775657-22775676 Msa1240330:intron 45.0%
GGTGAAGGGATTTCATTGGT+TGG - chr8_2:22775807-22775826 Msa1240330:intron 45.0%
GTATGGTGATCTTCCTCTTC+TGG + chr8_2:22775960-22775979 None:intergenic 45.0%
TTACGTCTTCCCCTAACAAC+GGG + chr8_2:22776103-22776122 None:intergenic 45.0%
GACTGTCATTAGTGTTCCTG+AGG + chr8_2:22776436-22776455 None:intergenic 45.0%
GAACTGTTTAGGGATTGGGA+TGG - chr8_2:22776585-22776604 Msa1240330:five_prime_UTR 45.0%
CAATAGCAATGTCAGAGCAG+AGG + chr8_2:22776664-22776683 None:intergenic 45.0%
!!! TTTAAAAAATTTAGAATTAA+AGG - chr8_2:22770249-22770268 Msa1240330:CDS 5.0%
!! TAAATAAATAAAAAATAAAG+GGG + chr8_2:22770450-22770469 None:intergenic 5.0%
! TCTGGAGCTGAGTGTTTAGC+TGG + chr8_2:22768995-22769014 None:intergenic 50.0%
GCTAAACACTCAGCTCCAGA+TGG - chr8_2:22768995-22769014 Msa1240330:three_prime_UTR 50.0%
TCGCCAGTGTTCATGCATGT+TGG - chr8_2:22769249-22769268 Msa1240330:CDS 50.0%
GGTCCAACATGCATGAACAC+TGG + chr8_2:22769255-22769274 None:intergenic 50.0%
!! AAGGAGTGGACTGAAAGGTC+AGG + chr8_2:22770003-22770022 None:intergenic 50.0%
TTACATGCACGACCGTTCAC+TGG - chr8_2:22770024-22770043 Msa1240330:CDS 50.0%
!!! GGAGGGTTTTAGAGGGGAAA+TGG - chr8_2:22770174-22770193 Msa1240330:CDS 50.0%
TCCTCCAGTGCTTGAATTGG+AGG - chr8_2:22770291-22770310 Msa1240330:CDS 50.0%
CCTCCAGTGCTTGAATTGGA+GGG - chr8_2:22770292-22770311 Msa1240330:CDS 50.0%
CTCCAGTGCTTGAATTGGAG+GGG - chr8_2:22770293-22770312 Msa1240330:CDS 50.0%
TCCAGTGCTTGAATTGGAGG+GGG - chr8_2:22770294-22770313 Msa1240330:CDS 50.0%
TGGATTGACGAGCTGCTGAA+TGG - chr8_2:22770484-22770503 Msa1240330:CDS 50.0%
GCCATGTTCAGCACAAGCTA+AGG - chr8_2:22770913-22770932 Msa1240330:CDS 50.0%
!! AATGCAGGAGACTGCCGTTT+TGG + chr8_2:22771310-22771329 None:intergenic 50.0%
CAGGGTTCTGTCAGCATCAT+AGG + chr8_2:22771790-22771809 None:intergenic 50.0%
!! GTGGATTGGGCCCAACAATT+GGG + chr8_2:22771833-22771852 None:intergenic 50.0%
!! TGTGGATTGGGCCCAACAAT+TGG + chr8_2:22771834-22771853 None:intergenic 50.0%
GAAGCTGTGCTTGTGTGGAT+TGG + chr8_2:22771847-22771866 None:intergenic 50.0%
CTTGAAGCCAGTAGAAGCTG+TGG - chr8_2:22771866-22771885 Msa1240330:intron 50.0%
CTGAAGAGAAGGAAGCCTAG+AGG - chr8_2:22771939-22771958 Msa1240330:intron 50.0%
!! TAAAAGAGGGGGGTGTCTAG+AGG - chr8_2:22771991-22772010 Msa1240330:intron 50.0%
!! TCTAGGAGCTTAGCTCTGGT+AGG - chr8_2:22772066-22772085 Msa1240330:intron 50.0%
GGTAGGAGTTCTCTGAACTC+TGG - chr8_2:22772083-22772102 Msa1240330:intron 50.0%
! AAGCCTTTTCCCACTACGTG+GGG + chr8_2:22772456-22772475 None:intergenic 50.0%
! CAAAGCCTTTTCCCACTACG+TGG + chr8_2:22772458-22772477 None:intergenic 50.0%
GTATCTAGCCGACCCCAAAA+TGG - chr8_2:22772489-22772508 Msa1240330:intron 50.0%
!! ACGGGCTAGAGGATATTTGG+AGG - chr8_2:22772782-22772801 Msa1240330:intron 50.0%
! CGGGCTAGAGGATATTTGGA+GGG - chr8_2:22772783-22772802 Msa1240330:intron 50.0%
TCTTCCTCTTCTTCTTCGGG+CGG + chr8_2:22773667-22773686 None:intergenic 50.0%
CTCCTCTGTTGTGGGAAAAG+TGG - chr8_2:22774140-22774159 Msa1240330:CDS 50.0%
!! CACCACTTTTCCCACAACAG+AGG + chr8_2:22774145-22774164 None:intergenic 50.0%
CTCTGTTGTGGGAAAAGTGG+TGG - chr8_2:22774143-22774162 Msa1240330:CDS 50.0%
CTGACATATCAGCCCATCCT+CGG - chr8_2:22774506-22774525 Msa1240330:intron 50.0%
ACCACTAGAGGTCGAGCATT+GGG + chr8_2:22774691-22774710 None:intergenic 50.0%
! TCGTCAAAGCGTTTCACGCT+AGG + chr8_2:22775186-22775205 None:intergenic 50.0%
ACAGTGAAATCTACCAGGCC+AGG + chr8_2:22775333-22775352 None:intergenic 50.0%
TGGCCTGGTAGATTTCACTG+TGG - chr8_2:22775332-22775351 Msa1240330:intron 50.0%
GCACCACAGTGAAATCTACC+AGG + chr8_2:22775338-22775357 None:intergenic 50.0%
TAGCCATGAAGTGGAAGGGT+TGG - chr8_2:22775661-22775680 Msa1240330:intron 50.0%
ACTCCAACCCTTCCACTTCA+TGG + chr8_2:22775667-22775686 None:intergenic 50.0%
AAGTGGAAGGGTTGGAGTCT+CGG - chr8_2:22775669-22775688 Msa1240330:intron 50.0%
!! AGCTGCTGATTCTCCAGAAG+AGG - chr8_2:22775944-22775963 Msa1240330:intron 50.0%
TTTCTCGAGAGCCCGTTGTT+AGG - chr8_2:22776089-22776108 Msa1240330:intron 50.0%
TTCTCGAGAGCCCGTTGTTA+GGG - chr8_2:22776090-22776109 Msa1240330:intron 50.0%
ATGCACGACCGTTCACTGGT+TGG - chr8_2:22770028-22770047 Msa1240330:CDS 55.0%
! AGTCGGTTTCAGGTGAACCG+AGG - chr8_2:22770089-22770108 Msa1240330:CDS 55.0%
! GTCGGTTTCAGGTGAACCGA+GGG - chr8_2:22770090-22770109 Msa1240330:CDS 55.0%
!! CCCTCCAATTCAAGCACTGG+AGG + chr8_2:22770295-22770314 None:intergenic 55.0%
TCCCCCTCCAATTCAAGCAC+TGG + chr8_2:22770298-22770317 None:intergenic 55.0%
AGTGCTTGAATTGGAGGGGG+AGG - chr8_2:22770297-22770316 Msa1240330:CDS 55.0%
GTGCTTGAATTGGAGGGGGA+GGG - chr8_2:22770298-22770317 Msa1240330:CDS 55.0%
TGCTTGAATTGGAGGGGGAG+GGG - chr8_2:22770299-22770318 Msa1240330:CDS 55.0%
GACGCTACCAAGGACAACAC+CGG + chr8_2:22770519-22770538 None:intergenic 55.0%
CTGGTCTAGGAGCTTAGCTC+TGG - chr8_2:22772062-22772081 Msa1240330:intron 55.0%
ATCTAGCAGACCCCACGTAG+TGG - chr8_2:22772443-22772462 Msa1240330:intron 55.0%
TCTAGCAGACCCCACGTAGT+GGG - chr8_2:22772444-22772463 Msa1240330:intron 55.0%
! AGACCCCACGTAGTGGGAAA+AGG - chr8_2:22772450-22772469 Msa1240330:intron 55.0%
GCCGACCCCAAAATGGGAAA+AGG - chr8_2:22772496-22772515 Msa1240330:intron 55.0%
!! TGCTGAAGATGACGGGCTAG+AGG - chr8_2:22772771-22772790 Msa1240330:CDS 55.0%
! AACTTGGTGGGAGACCATCC+CGG - chr8_2:22774583-22774602 Msa1240330:intron 55.0%
TCCCAATGCTCGACCTCTAG+TGG - chr8_2:22774687-22774706 Msa1240330:intron 55.0%
CACCACTAGAGGTCGAGCAT+TGG + chr8_2:22774692-22774711 None:intergenic 55.0%
ACCTCTAGTGGTGCTTCCCA+AGG - chr8_2:22774699-22774718 Msa1240330:intron 55.0%
CCTCTAGTGGTGCTTCCCAA+GGG - chr8_2:22774700-22774719 Msa1240330:intron 55.0%
TGACAGCAGATCCCAGCAAC+TGG - chr8_2:22774804-22774823 Msa1240330:intron 55.0%
TGGTGCTCAAACTTACGCCC+AGG - chr8_2:22775352-22775371 Msa1240330:intron 55.0%
GGCATCCCGTGTCATCATCT+TGG - chr8_2:22775830-22775849 Msa1240330:intron 55.0%
! ATTGGTCGTGCTTTTCGGCC+AGG - chr8_2:22775888-22775907 Msa1240330:intron 55.0%
TCTCGAGAGCCCGTTGTTAG+GGG - chr8_2:22776091-22776110 Msa1240330:intron 55.0%
! CACGACCGTTCACTGGTTGG+AGG - chr8_2:22770031-22770050 Msa1240330:CDS 60.0%
!! GAGGGGGGTGTCTAGAGGTA+AGG - chr8_2:22771996-22772015 Msa1240330:intron 60.0%
TCCTCCGCCCGAAGAAGAAG+AGG - chr8_2:22773660-22773679 Msa1240330:intron 60.0%
TCCTCTTCTTCTTCGGGCGG+AGG + chr8_2:22773664-22773683 None:intergenic 60.0%
! ACTTGGTGGGAGACCATCCC+GGG - chr8_2:22774584-22774603 Msa1240330:intron 60.0%
ATGAGCCAGGATGCATCCCC+CGG + chr8_2:22774605-22774624 None:intergenic 60.0%
TGCATCCTGGCTCATGCTCC+AGG - chr8_2:22774610-22774629 Msa1240330:intron 60.0%
CCTGGCTCATGCTCCAGGAT+CGG - chr8_2:22774615-22774634 Msa1240330:intron 60.0%
CTGGCTCATGCTCCAGGATC+GGG - chr8_2:22774616-22774635 Msa1240330:intron 60.0%
!! CCCTTGGGAAGCACCACTAG+AGG + chr8_2:22774703-22774722 None:intergenic 60.0%
CAGCAGATCCCAGCAACTGG+AGG - chr8_2:22774807-22774826 Msa1240330:intron 60.0%
GCCTATCGTCCGACGCATTC+AGG - chr8_2:22775146-22775165 Msa1240330:intron 60.0%
GCCTGAATGCGTCGGACGAT+AGG + chr8_2:22775150-22775169 None:intergenic 60.0%
TCGTCCGACGCATTCAGGCT+AGG - chr8_2:22775151-22775170 Msa1240330:intron 60.0%
CGTCCGACGCATTCAGGCTA+GGG - chr8_2:22775152-22775171 Msa1240330:intron 60.0%
GGACCCTAGCCTGAATGCGT+CGG + chr8_2:22775158-22775177 None:intergenic 60.0%
TCTTGACGAGCTTCCTGGCC+TGG - chr8_2:22775317-22775336 Msa1240330:intron 60.0%
!! ACAACAGGGCATGGTGCCGC+AGG + chr8_2:22771217-22771236 None:intergenic 65.0%
CTTGGTGGGAGACCATCCCG+GGG - chr8_2:22774585-22774604 Msa1240330:intron 65.0%
TTGGTGGGAGACCATCCCGG+GGG - chr8_2:22774586-22774605 Msa1240330:intron 65.0%
TGAGCCAGGATGCATCCCCC+GGG + chr8_2:22774604-22774623 None:intergenic 65.0%
CCGATCCTGGAGCATGAGCC+AGG + chr8_2:22774618-22774637 None:intergenic 65.0%
CCAGGATGCATCCCCCGGGA+TGG + chr8_2:22774600-22774619 None:intergenic 70.0%
CCATCCCGGGGGATGCATCC+TGG - chr8_2:22774597-22774616 Msa1240330:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 22768626 22776750 22768626 ID=Msa1240330;Name=Msa1240330
chr8_2 mRNA 22768626 22776750 22768626 ID=Msa1240330-mRNA-1;Parent=Msa1240330;Name=Msa1240330-mRNA-1;_AED=0.02;_eAED=0.02;_QI=258|1|1|1|0.57|0.5|8|447|890
chr8_2 exon 22768626 22769015 22768626 ID=Msa1240330-mRNA-1:exon:8139;Parent=Msa1240330-mRNA-1
chr8_2 exon 22769088 22769148 22769088 ID=Msa1240330-mRNA-1:exon:8138;Parent=Msa1240330-mRNA-1
chr8_2 exon 22769238 22770970 22769238 ID=Msa1240330-mRNA-1:exon:8137;Parent=Msa1240330-mRNA-1
chr8_2 exon 22771578 22771730 22771578 ID=Msa1240330-mRNA-1:exon:8136;Parent=Msa1240330-mRNA-1
chr8_2 exon 22772542 22772796 22772542 ID=Msa1240330-mRNA-1:exon:8135;Parent=Msa1240330-mRNA-1
chr8_2 exon 22774037 22774515 22774037 ID=Msa1240330-mRNA-1:exon:8134;Parent=Msa1240330-mRNA-1
chr8_2 exon 22776360 22776427 22776360 ID=Msa1240330-mRNA-1:exon:8133;Parent=Msa1240330-mRNA-1
chr8_2 exon 22776512 22776750 22776512 ID=Msa1240330-mRNA-1:exon:8132;Parent=Msa1240330-mRNA-1
chr8_2 five_prime_UTR 22776512 22776750 22776512 ID=Msa1240330-mRNA-1:five_prime_utr;Parent=Msa1240330-mRNA-1
chr8_2 five_prime_UTR 22776409 22776427 22776409 ID=Msa1240330-mRNA-1:five_prime_utr;Parent=Msa1240330-mRNA-1
chr8_2 CDS 22776360 22776408 22776360 ID=Msa1240330-mRNA-1:cds;Parent=Msa1240330-mRNA-1
chr8_2 CDS 22774037 22774515 22774037 ID=Msa1240330-mRNA-1:cds;Parent=Msa1240330-mRNA-1
chr8_2 CDS 22772542 22772796 22772542 ID=Msa1240330-mRNA-1:cds;Parent=Msa1240330-mRNA-1
chr8_2 CDS 22771578 22771730 22771578 ID=Msa1240330-mRNA-1:cds;Parent=Msa1240330-mRNA-1
chr8_2 CDS 22769238 22770970 22769238 ID=Msa1240330-mRNA-1:cds;Parent=Msa1240330-mRNA-1
chr8_2 CDS 22769145 22769148 22769145 ID=Msa1240330-mRNA-1:cds;Parent=Msa1240330-mRNA-1
chr8_2 three_prime_UTR 22769088 22769144 22769088 ID=Msa1240330-mRNA-1:three_prime_utr;Parent=Msa1240330-mRNA-1
chr8_2 three_prime_UTR 22768626 22769015 22768626 ID=Msa1240330-mRNA-1:three_prime_utr;Parent=Msa1240330-mRNA-1
Gene Sequence

>Msa1240330

ATGGATTCATCGGTTCAGTTGTTACCAGCTAAACACTCAGCTCCAGATGGTATTTCATCTGAGGAAGGATGCAAAAAACTTAAGTTATCAAGTGATGGTTTGCCATGTTCAGCACAAGCTAAGGTTGTTGATTACAGTAATCCGTATGCAATCACAGAAGTTTTAAATAGTTTAGAGGGTGGAGAATATGGTAGTGTGACAAAGGATATTGATGCCCTTATAACCCGAAAAATGCAAGTATTAGGCCCCTACTTTGCTAAATATCCTACCCTTATTGATCGATTCTTGAAAGTGGTGACAGATCAGGATGAAAAAAGTCACCACTCAGATCAAAATGTCATAGATTTGGATGAGGAACAAATTCAAAGGGATGTTAGCGCACCAAAAAGAGAAAAGGATGTTCCTGCGGCACCATGCCCTGTTGTTATAATTGATTCAGACGAGGAGGATGATAGGGATCAGAAGTCTTTTCATGCGTATCATGAAGTTGTTTTGCCAAAACGGCAGTCTCCTGCATTAAAAATGATTGGATATCATCCTCCCAATGCTTACAATGGAGAAAGTTCAGATCTAAAATTTGAAACAAGTCTGCCTCCTAATGCATACTATGGAGAAAGCGCGGATAAAAAATTTGAAAAAAAACTGCCTCCTAAAGATAACCCAAGGAAAGATAAAGGTGTTTATCTTGGTGTACAAGAGGAAGAAGATAATGTGGTTGATGCTGAAGATGACGGGCTAGAGGATATTTGGAGGGAGATGTCAATGGCAATAGAAACTTCTAAAGATGTTTCTGCAGATCCTCCGCCCGAAGAAGAAGAGGAAGAAGATGCTGACTGCGATCACTCTTTTGTTCTAAAAGACGATCTTGGATATGTTTGTCGTGTTTGTGGGGTTATTGATAGAGGAATTGAAACCATATTTGAGTTTCAATACAAGGTTAAAAGGAGCACCAGGACTTATATGTCCGATTCGTCGAAAGCCAAAGAAAAAGTGGATGCGTTTGGAGTGAAGATTGCTGAAGAAGATTTCTTGGCAACTGACATATCAGCCCATCCTCGGCATGCTAATCAAATGAAACCGCACCAAGTTGAAGGATTCAACTTTCTCGTCAGAAACTTGGTGGGAGACCATCCCGGGGGATGCATCCTGGCTCATGCTCCAGGATCGGGAAAGACTTTCATGATTATCAGTTTCATGCAAAGTTTTCTAGGAAAGTATCCCAATGCTCGACCTCTAGTGGTGCTTCCCAAGGGAATATTGTCGACTTGGAAGAAAGAGTTTCAAACGTGGCAAGTGGAAGATATACCGCTCTATGATCTATACACTGTGAAGGCTGACAGCAGATCCCAGCAACTGGAGGTGTTAAAACAATGGATGAATAACAAAAGTATCCTTTTCTTAGGATACAAACAGTTTTCTTCCATTGTGTGTGATAATAGTAATAACAATGCATCAATATCATGCCAAGAGATATTGCTTAAAGTTCCCTCAATTCTCATTTTAGATGAGGGACACACTCCAAGAAATGAGAATACAGATATGGTACAGTCCCTTGCCAAAGTACAAACACCTAGAAAAGTTGTATTGTCTGGAACTCTTTATCAAAATCATGTTAGGGAGGTTTTCAATGTTCTCAATCTTGTGAGGCCGAAGTTTTTAAAGATGGAAACATCTAAGCCTATCGTCCGACGCATTCAGGCTAGGGTCCATATACCTAGCGTGAAACGCTTTGACGATTTGGTTGAGAATACATTACAGAAGGACCCAGATTTTAAAAGGAAAGTTGCTGTAATTCATGATTTGCGTGAGATGACCAGTAAAGTTCTTCACTACTACAAAGGCGATTTTCTTGACGAGCTTCCTGGCCTGGTAGATTTCACTGTGGTGCTCAAACTTACGCCCAGGCAGAAGATTGAAGTTGAGAAAGCAAAGAAGATGTATATTAGAAAGTTCAAATTTTCTTCTGTAGGCAGTGCAGTGTATCTGCACCCAAAGTTGAAGCCAATTGCAGAGAAATGTGATGAAAATTCCATATCTGATCATATCATGGATGATTTTATAGCAGACCTTGATATGAGAGATGGAGTCAAATCAAAGTTCTTTCGCAATATGCTGAACCTATGTGAATCAGCTGGGGAAAAACTTCTGGTGTTCAGTCAATATCTATTGCCTTTGAAATATTTGGAAAGGTTAGCCATGAAGTGGAAGGGTTGGAGTCTCGGAAAAGAAATCTTCGTGATTTCAGGAGAATCTTCCGCTGAACAGAGAGAGTTTTCAATGGAGAAGTTTAACAATTCACCCGAGGCAAAAATATTTTTTGGCTCAATCAAAGCATGTGGTGAAGGGATTTCATTGGTTGGGGCATCCCGTGTCATCATCTTGGATGTTCATCTCAACCCATCTGTTACTCGTCAAGCTATTGGTCGTGCTTTTCGGCCAGGACAGAAAAAGAAAGTCTTTGTGTATCGTTTGATAGCTGCTGATTCTCCAGAAGAGGAAGATCACCATACTTGTTTCAAGAAGGAGTTAATCTCAAAAATGTGGTTTGAATGGAATGAATATTGTGGTGACCGCGCATTTGAAGTTGAAACACTTGATGTGAAAGAATGTGGTGATCTATTTCTCGAGAGCCCGTTGTTAGGGGAAGACGTAAAAGCTCTGTATAAAAGGTAA
Protein sequence

>Msa1240330

MDSSVQLLPAKHSAPDGISSEEGCKKLKLSSDGLPCSAQAKVVDYSNPYAITEVLNSLEGGEYGSVTKDIDALITRKMQVLGPYFAKYPTLIDRFLKVVTDQDEKSHHSDQNVIDLDEEQIQRDVSAPKREKDVPAAPCPVVIIDSDEEDDRDQKSFHAYHEVVLPKRQSPALKMIGYHPPNAYNGESSDLKFETSLPPNAYYGESADKKFEKKLPPKDNPRKDKGVYLGVQEEEDNVVDAEDDGLEDIWREMSMAIETSKDVSADPPPEEEEEEDADCDHSFVLKDDLGYVCRVCGVIDRGIETIFEFQYKVKRSTRTYMSDSSKAKEKVDAFGVKIAEEDFLATDISAHPRHANQMKPHQVEGFNFLVRNLVGDHPGGCILAHAPGSGKTFMIISFMQSFLGKYPNARPLVVLPKGILSTWKKEFQTWQVEDIPLYDLYTVKADSRSQQLEVLKQWMNNKSILFLGYKQFSSIVCDNSNNNASISCQEILLKVPSILILDEGHTPRNENTDMVQSLAKVQTPRKVVLSGTLYQNHVREVFNVLNLVRPKFLKMETSKPIVRRIQARVHIPSVKRFDDLVENTLQKDPDFKRKVAVIHDLREMTSKVLHYYKGDFLDELPGLVDFTVVLKLTPRQKIEVEKAKKMYIRKFKFSSVGSAVYLHPKLKPIAEKCDENSISDHIMDDFIADLDMRDGVKSKFFRNMLNLCESAGEKLLVFSQYLLPLKYLERLAMKWKGWSLGKEIFVISGESSAEQREFSMEKFNNSPEAKIFFGSIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQKKKVFVYRLIAADSPEEEDHHTCFKKELISKMWFEWNEYCGDRAFEVETLDVKECGDLFLESPLLGEDVKALYKR*