Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0860510 | XP_024639458.1 | 85.526 | 456 | 65 | 1 | 1 | 456 | 1 | 455 | 0.0 | 812 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0860510 | sp|Q9SD53|Y3720_ARATH | 29.530 | 447 | 278 | 16 | 20 | 451 | 34 | 458 | 8.75e-45 | 166 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0860510 | A0A396HXR1 | 85.526 | 456 | 65 | 1 | 1 | 456 | 1 | 455 | 0.0 | 812 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0013270 | Msa0860510 | 0.824135 | 9.507677e-54 | -8.615850e-47 |
Msa0072180 | Msa0860510 | 0.803643 | 3.160779e-49 | -8.615850e-47 |
Msa0629160 | Msa0860510 | 0.803275 | 3.768451e-49 | -8.615850e-47 |
Msa0674070 | Msa0860510 | 0.804134 | 2.499500e-49 | -8.615850e-47 |
Msa0739720 | Msa0860510 | 0.837930 | 3.887561e-57 | -8.615850e-47 |
Msa0491780 | Msa0860510 | 0.806817 | 6.843321e-50 | -8.615850e-47 |
Msa0860510 | Msa1029860 | 0.802612 | 5.165176e-49 | -8.615850e-47 |
Msa0860510 | Msa1108560 | 0.805941 | 1.046816e-49 | -8.615850e-47 |
Msa0860510 | Msa1281780 | 0.801180 | 1.016939e-48 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0860510 | MtrunA17_Chr5g0439641 | 85.526 | 456 | 65 | 1 | 1 | 456 | 1 | 455 | 0.0 | 812 |
Msa0860510 | MtrunA17_Chr5g0439721 | 64.680 | 453 | 144 | 6 | 1 | 453 | 1 | 437 | 0.0 | 595 |
Msa0860510 | MtrunA17_Chr5g0440401 | 63.514 | 222 | 81 | 0 | 235 | 456 | 1 | 222 | 7.81e-101 | 300 |
Msa0860510 | MtrunA17_Chr5g0439681 | 74.194 | 186 | 47 | 1 | 271 | 455 | 130 | 315 | 3.37e-94 | 287 |
Msa0860510 | MtrunA17_Chr5g0439661 | 67.188 | 192 | 62 | 1 | 5 | 196 | 1 | 191 | 4.63e-90 | 272 |
Msa0860510 | MtrunA17_Chr5g0401791 | 33.974 | 468 | 276 | 13 | 6 | 453 | 77 | 531 | 4.88e-75 | 244 |
Msa0860510 | MtrunA17_Chr8g0354871 | 50.000 | 240 | 95 | 4 | 230 | 454 | 158 | 387 | 3.58e-70 | 227 |
Msa0860510 | MtrunA17_Chr8g0354871 | 56.716 | 67 | 13 | 2 | 124 | 190 | 1 | 51 | 3.85e-11 | 64.7 |
Msa0860510 | MtrunA17_Chr5g0440391 | 73.109 | 119 | 30 | 2 | 1 | 119 | 1 | 117 | 1.90e-55 | 180 |
Msa0860510 | MtrunA17_Chr8g0335021 | 28.821 | 458 | 263 | 15 | 30 | 451 | 25 | 455 | 1.52e-45 | 164 |
Msa0860510 | MtrunA17_Chr7g0265891 | 29.206 | 428 | 268 | 12 | 34 | 452 | 53 | 454 | 3.67e-45 | 163 |
Msa0860510 | MtrunA17_Chr8g0334971 | 28.795 | 448 | 268 | 13 | 18 | 441 | 14 | 434 | 4.06e-44 | 160 |
Msa0860510 | MtrunA17_Chr8g0335061 | 27.171 | 449 | 276 | 14 | 25 | 449 | 20 | 441 | 5.80e-43 | 157 |
Msa0860510 | MtrunA17_Chr2g0300311 | 29.638 | 469 | 247 | 17 | 7 | 445 | 30 | 445 | 3.54e-41 | 153 |
Msa0860510 | MtrunA17_Chr6g0452601 | 25.858 | 437 | 286 | 12 | 27 | 453 | 15 | 423 | 1.52e-40 | 150 |
Msa0860510 | MtrunA17_Chr6g0457371 | 27.830 | 424 | 262 | 14 | 34 | 453 | 27 | 410 | 1.56e-40 | 149 |
Msa0860510 | MtrunA17_Chr2g0297831 | 29.095 | 464 | 255 | 19 | 7 | 445 | 47 | 461 | 4.07e-40 | 150 |
Msa0860510 | MtrunA17_Chr6g0452611 | 28.029 | 421 | 267 | 10 | 30 | 448 | 22 | 408 | 2.03e-39 | 146 |
Msa0860510 | MtrunA17_Chr6g0452551 | 26.478 | 423 | 270 | 12 | 30 | 448 | 23 | 408 | 2.30e-39 | 146 |
Msa0860510 | MtrunA17_Chr8g0334951 | 26.667 | 435 | 269 | 12 | 25 | 439 | 22 | 426 | 1.34e-38 | 145 |
Msa0860510 | MtrunA17_Chr7g0238511 | 29.691 | 421 | 242 | 17 | 49 | 448 | 46 | 433 | 3.74e-38 | 144 |
Msa0860510 | MtrunA17_Chr6g0452561 | 25.754 | 431 | 272 | 11 | 34 | 448 | 27 | 425 | 5.55e-37 | 140 |
Msa0860510 | MtrunA17_Chr6g0452531 | 25.747 | 435 | 283 | 11 | 27 | 454 | 15 | 416 | 2.82e-36 | 138 |
Msa0860510 | MtrunA17_Chr6g0452161 | 27.842 | 431 | 272 | 12 | 34 | 455 | 27 | 427 | 5.37e-36 | 137 |
Msa0860510 | MtrunA17_Chr6g0452501 | 25.754 | 431 | 285 | 9 | 25 | 453 | 18 | 415 | 7.81e-36 | 137 |
Msa0860510 | MtrunA17_Chr8g0354881 | 61.616 | 99 | 37 | 1 | 4 | 102 | 13 | 110 | 8.23e-36 | 128 |
Msa0860510 | MtrunA17_Chr7g0238111 | 28.261 | 460 | 258 | 18 | 23 | 455 | 21 | 435 | 3.55e-35 | 135 |
Msa0860510 | MtrunA17_Chr6g0452591 | 25.696 | 467 | 282 | 14 | 1 | 453 | 30 | 445 | 5.32e-35 | 135 |
Msa0860510 | MtrunA17_Chr8g0352511 | 28.166 | 458 | 264 | 19 | 32 | 444 | 29 | 466 | 5.75e-35 | 135 |
Msa0860510 | MtrunA17_Chr8g0335011 | 24.528 | 477 | 296 | 11 | 25 | 448 | 29 | 494 | 3.01e-34 | 134 |
Msa0860510 | MtrunA17_Chr7g0238231 | 27.371 | 464 | 253 | 13 | 49 | 449 | 46 | 488 | 3.83e-34 | 133 |
Msa0860510 | MtrunA17_Chr8g0334911 | 26.218 | 431 | 266 | 14 | 29 | 437 | 25 | 425 | 1.61e-33 | 130 |
Msa0860510 | MtrunA17_Chr8g0335071 | 25.991 | 454 | 275 | 16 | 33 | 454 | 38 | 462 | 1.79e-33 | 131 |
Msa0860510 | MtrunA17_Chr6g0452571 | 29.275 | 345 | 197 | 11 | 120 | 455 | 49 | 355 | 2.82e-33 | 129 |
Msa0860510 | MtrunA17_Chr3g0138001 | 26.813 | 455 | 289 | 13 | 12 | 454 | 4 | 426 | 3.86e-33 | 131 |
Msa0860510 | MtrunA17_Chr8g0354591 | 27.155 | 464 | 259 | 19 | 32 | 447 | 24 | 456 | 4.50e-33 | 130 |
Msa0860510 | MtrunA17_Chr7g0238241 | 28.894 | 443 | 249 | 13 | 49 | 448 | 45 | 464 | 1.57e-31 | 125 |
Msa0860510 | MtrunA17_Chr7g0238131 | 27.586 | 435 | 250 | 17 | 54 | 447 | 1 | 411 | 7.87e-31 | 123 |
Msa0860510 | MtrunA17_Chr7g0238101 | 28.041 | 485 | 252 | 19 | 28 | 447 | 23 | 475 | 1.22e-30 | 123 |
Msa0860510 | MtrunA17_Chr5g0439691 | 56.250 | 112 | 38 | 2 | 165 | 276 | 2 | 102 | 1.02e-29 | 111 |
Msa0860510 | MtrunA17_Chr7g0238211 | 38.333 | 180 | 101 | 4 | 277 | 449 | 5 | 181 | 1.41e-29 | 114 |
Msa0860510 | MtrunA17_Chr8g0354581 | 26.940 | 464 | 267 | 19 | 32 | 447 | 24 | 463 | 6.53e-29 | 118 |
Msa0860510 | MtrunA17_Chr7g0238251 | 25.918 | 490 | 262 | 14 | 31 | 449 | 29 | 488 | 3.32e-28 | 116 |
Msa0860510 | MtrunA17_Chr2g0296801 | 31.579 | 171 | 116 | 1 | 276 | 445 | 175 | 345 | 4.23e-27 | 111 |
Msa0860510 | MtrunA17_Chr6g0452541 | 33.333 | 189 | 123 | 3 | 268 | 453 | 51 | 239 | 6.70e-27 | 108 |
Msa0860510 | MtrunA17_Chr7g0218171 | 32.584 | 178 | 118 | 2 | 278 | 453 | 125 | 302 | 1.11e-26 | 109 |
Msa0860510 | MtrunA17_Chr7g0238051 | 34.359 | 195 | 115 | 4 | 258 | 447 | 175 | 361 | 1.95e-26 | 109 |
Msa0860510 | MtrunA17_Chr7g0238091 | 36.158 | 177 | 105 | 5 | 277 | 447 | 41 | 215 | 7.34e-26 | 105 |
Msa0860510 | MtrunA17_Chr8g0352491 | 34.884 | 172 | 93 | 5 | 291 | 444 | 10 | 180 | 4.10e-24 | 99.0 |
Msa0860510 | MtrunA17_Chr7g0238191 | 26.419 | 458 | 268 | 16 | 23 | 448 | 16 | 436 | 2.59e-23 | 102 |
Msa0860510 | MtrunA17_Chr7g0238181 | 27.434 | 339 | 202 | 11 | 124 | 455 | 57 | 358 | 2.87e-23 | 100 |
Msa0860510 | MtrunA17_Chr1g0170351 | 25.200 | 500 | 251 | 24 | 30 | 453 | 25 | 477 | 4.72e-23 | 101 |
Msa0860510 | MtrunA17_Chr7g0238141 | 25.935 | 428 | 261 | 11 | 49 | 448 | 45 | 444 | 7.97e-23 | 100 |
Msa0860510 | MtrunA17_Chr7g0238171 | 35.227 | 176 | 107 | 4 | 277 | 447 | 342 | 515 | 8.19e-23 | 101 |
Msa0860510 | MtrunA17_Chr7g0232521 | 36.416 | 173 | 104 | 3 | 277 | 444 | 42 | 213 | 1.44e-21 | 92.8 |
Msa0860510 | MtrunA17_Chr2g0297821 | 32.044 | 181 | 114 | 5 | 275 | 447 | 1 | 180 | 1.66e-21 | 91.7 |
Msa0860510 | MtrunA17_Chr7g0238081 | 33.898 | 177 | 103 | 4 | 277 | 448 | 5 | 172 | 2.86e-21 | 90.9 |
Msa0860510 | MtrunA17_Chr3g0118601 | 30.588 | 170 | 114 | 3 | 278 | 444 | 277 | 445 | 1.14e-20 | 94.4 |
Msa0860510 | MtrunA17_Chr8g0354621 | 35.135 | 148 | 81 | 3 | 314 | 447 | 4 | 150 | 1.48e-20 | 88.2 |
Msa0860510 | MtrunA17_Chr7g0238281 | 34.091 | 176 | 109 | 4 | 277 | 447 | 6 | 179 | 1.00e-17 | 80.9 |
Msa0860510 | MtrunA17_Chr4g0002901 | 30.097 | 206 | 126 | 8 | 260 | 454 | 361 | 559 | 5.60e-17 | 83.6 |
Msa0860510 | MtrunA17_Chr4g0002901 | 30.909 | 165 | 104 | 6 | 33 | 192 | 43 | 202 | 4.64e-11 | 65.1 |
Msa0860510 | MtrunA17_Chr4g0002911 | 29.557 | 203 | 125 | 8 | 263 | 454 | 362 | 557 | 9.37e-16 | 79.7 |
Msa0860510 | MtrunA17_Chr4g0002911 | 30.556 | 216 | 129 | 7 | 33 | 240 | 43 | 245 | 3.97e-13 | 71.2 |
Msa0860510 | MtrunA17_Chr7g0242181 | 29.500 | 200 | 100 | 8 | 7 | 188 | 17 | 193 | 3.00e-13 | 71.6 |
Msa0860510 | MtrunA17_Chr4g0006121 | 25.000 | 256 | 136 | 9 | 234 | 448 | 66 | 306 | 1.48e-12 | 68.2 |
Msa0860510 | MtrunA17_Chr7g0242151 | 29.341 | 167 | 100 | 5 | 30 | 188 | 27 | 183 | 1.81e-12 | 69.3 |
Msa0860510 | MtrunA17_Chr4g0002861 | 29.000 | 200 | 134 | 5 | 259 | 452 | 360 | 557 | 1.88e-12 | 69.3 |
Msa0860510 | MtrunA17_Chr4g0002861 | 29.224 | 219 | 130 | 9 | 33 | 241 | 43 | 246 | 4.80e-12 | 68.2 |
Msa0860510 | MtrunA17_Chr7g0242071 | 28.994 | 169 | 94 | 4 | 30 | 188 | 27 | 179 | 3.98e-12 | 68.2 |
Msa0860510 | MtrunA17_Chr7g0220521 | 26.842 | 190 | 132 | 4 | 259 | 444 | 350 | 536 | 5.58e-12 | 67.8 |
Msa0860510 | MtrunA17_Chr7g0220521 | 28.571 | 168 | 110 | 5 | 33 | 195 | 42 | 204 | 5.46e-11 | 64.7 |
Msa0860510 | MtrunA17_Chr3g0091831 | 22.222 | 396 | 248 | 16 | 23 | 386 | 34 | 401 | 3.63e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0860510 | AT3G50120.1 | 35.747 | 442 | 254 | 12 | 29 | 453 | 100 | 528 | 1.24e-83 | 267 |
Msa0860510 | AT3G50170.1 | 35.000 | 460 | 265 | 13 | 9 | 453 | 96 | 536 | 2.33e-81 | 261 |
Msa0860510 | AT3G50140.1 | 32.684 | 462 | 282 | 11 | 5 | 453 | 91 | 536 | 4.45e-80 | 258 |
Msa0860510 | AT3G50150.1 | 35.227 | 440 | 250 | 10 | 29 | 453 | 87 | 506 | 1.45e-79 | 256 |
Msa0860510 | AT3G50160.1 | 33.929 | 448 | 264 | 11 | 7 | 453 | 82 | 498 | 3.12e-78 | 252 |
Msa0860510 | AT3G50180.1 | 32.473 | 465 | 268 | 11 | 1 | 452 | 153 | 584 | 5.33e-73 | 241 |
Msa0860510 | AT3G50130.1 | 33.406 | 458 | 272 | 15 | 9 | 452 | 122 | 560 | 2.67e-71 | 236 |
Msa0860510 | AT3G50190.1 | 29.890 | 455 | 279 | 12 | 5 | 455 | 74 | 492 | 2.61e-63 | 213 |
Msa0860510 | AT4G31980.1 | 32.220 | 419 | 244 | 12 | 31 | 445 | 292 | 674 | 2.72e-55 | 195 |
Msa0860510 | AT2G36430.1 | 30.986 | 426 | 267 | 10 | 33 | 454 | 46 | 448 | 1.77e-52 | 183 |
Msa0860510 | AT3G47250.3 | 29.501 | 461 | 291 | 16 | 8 | 453 | 36 | 477 | 6.10e-52 | 182 |
Msa0860510 | AT3G47250.2 | 29.501 | 461 | 291 | 16 | 8 | 453 | 36 | 477 | 6.10e-52 | 182 |
Msa0860510 | AT3G47250.1 | 29.501 | 461 | 291 | 16 | 8 | 453 | 36 | 477 | 6.10e-52 | 182 |
Msa0860510 | AT5G22540.1 | 29.754 | 447 | 279 | 14 | 16 | 453 | 15 | 435 | 2.98e-51 | 179 |
Msa0860510 | AT3G47200.1 | 29.530 | 447 | 278 | 16 | 20 | 451 | 34 | 458 | 8.89e-46 | 166 |
Msa0860510 | AT3G47200.2 | 29.530 | 447 | 278 | 16 | 20 | 451 | 34 | 458 | 8.89e-46 | 166 |
Msa0860510 | AT5G11290.2 | 28.571 | 413 | 263 | 11 | 34 | 445 | 35 | 416 | 4.74e-44 | 160 |
Msa0860510 | AT5G22550.2 | 27.623 | 467 | 266 | 15 | 34 | 453 | 46 | 487 | 1.19e-43 | 160 |
Msa0860510 | AT3G50140.2 | 30.383 | 339 | 207 | 11 | 7 | 333 | 93 | 414 | 8.17e-43 | 156 |
Msa0860510 | AT3G44710.1 | 28.395 | 486 | 277 | 19 | 20 | 453 | 35 | 501 | 1.10e-42 | 158 |
Msa0860510 | AT3G50170.2 | 32.817 | 323 | 184 | 12 | 9 | 317 | 96 | 399 | 3.35e-41 | 152 |
Msa0860510 | AT3G50150.2 | 29.570 | 372 | 209 | 12 | 6 | 351 | 66 | 410 | 2.39e-38 | 145 |
Msa0860510 | AT5G22560.1 | 25.620 | 484 | 278 | 15 | 34 | 453 | 49 | 514 | 5.38e-38 | 145 |
Msa0860510 | AT3G50190.4 | 29.846 | 325 | 191 | 11 | 7 | 331 | 76 | 363 | 4.38e-37 | 140 |
Msa0860510 | AT3G50190.3 | 29.846 | 325 | 191 | 11 | 7 | 331 | 76 | 363 | 4.38e-37 | 140 |
Msa0860510 | AT3G50190.2 | 30.323 | 310 | 180 | 10 | 7 | 316 | 76 | 349 | 6.74e-37 | 139 |
Msa0860510 | AT3G47210.1 | 27.869 | 427 | 273 | 14 | 9 | 430 | 70 | 466 | 1.03e-36 | 140 |
Msa0860510 | AT2G28580.6 | 27.650 | 434 | 270 | 12 | 34 | 450 | 43 | 449 | 1.35e-35 | 137 |
Msa0860510 | AT2G28580.1 | 27.650 | 434 | 270 | 12 | 34 | 450 | 111 | 517 | 2.91e-35 | 137 |
Msa0860510 | AT2G28580.2 | 27.650 | 434 | 270 | 12 | 34 | 450 | 125 | 531 | 3.42e-35 | 137 |
Msa0860510 | AT2G28580.4 | 27.488 | 422 | 269 | 12 | 34 | 450 | 125 | 514 | 1.69e-34 | 135 |
Msa0860510 | AT2G28580.5 | 27.488 | 422 | 269 | 12 | 34 | 450 | 111 | 500 | 1.90e-34 | 135 |
Msa0860510 | AT2G44930.1 | 27.815 | 453 | 260 | 18 | 34 | 455 | 86 | 502 | 3.90e-34 | 134 |
Msa0860510 | AT5G11290.1 | 27.321 | 377 | 243 | 10 | 70 | 445 | 1 | 347 | 8.65e-33 | 127 |
Msa0860510 | AT5G22550.1 | 25.054 | 463 | 234 | 14 | 34 | 453 | 46 | 438 | 8.93e-33 | 129 |
Msa0860510 | AT1G67150.4 | 25.740 | 439 | 270 | 16 | 30 | 450 | 4 | 404 | 5.19e-30 | 121 |
Msa0860510 | AT1G67150.1 | 25.740 | 439 | 270 | 16 | 30 | 450 | 4 | 404 | 5.19e-30 | 121 |
Msa0860510 | AT1G67150.2 | 25.508 | 443 | 270 | 16 | 30 | 450 | 4 | 408 | 2.21e-29 | 119 |
Msa0860510 | AT2G28580.3 | 26.542 | 373 | 230 | 12 | 34 | 388 | 125 | 471 | 1.05e-23 | 103 |
Msa0860510 | AT1G65985.1 | 23.904 | 456 | 253 | 16 | 27 | 426 | 9 | 426 | 8.51e-23 | 100 |
Msa0860510 | AT1G65985.2 | 23.904 | 456 | 253 | 16 | 27 | 426 | 9 | 426 | 8.51e-23 | 100 |
Msa0860510 | AT1G67150.3 | 23.516 | 438 | 238 | 14 | 30 | 450 | 4 | 361 | 7.06e-22 | 97.1 |
Msa0860510 | AT3G60470.1 | 33.146 | 178 | 117 | 2 | 278 | 454 | 364 | 540 | 4.68e-20 | 93.2 |
Msa0860510 | AT3G02645.1 | 27.011 | 174 | 123 | 2 | 258 | 427 | 325 | 498 | 1.92e-15 | 79.0 |
Msa0860510 | AT3G44695.1 | 23.497 | 183 | 136 | 3 | 275 | 453 | 27 | 209 | 3.05e-12 | 66.2 |
Find 95 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCATCATTTCAATGAATTT+TGG | 0.154210 | 5_4:-59276367 | None:intergenic |
GGGGAAATGTATGCATATTT+TGG | 0.178569 | 5_4:+59277583 | Msa0860510:CDS |
TTTGGTCCTTATTACCATTA+TGG | 0.187428 | 5_4:+59276178 | Msa0860510:CDS |
TCTTGATGGTTGTTTCATTT+TGG | 0.199274 | 5_4:+59276390 | Msa0860510:CDS |
CTTGGGGTTTGAAGGCATTT+TGG | 0.201739 | 5_4:-59276147 | None:intergenic |
ACAAGTCACTTGATCCAATT+TGG | 0.235857 | 5_4:+59276332 | Msa0860510:CDS |
GGAGGAGAATTTAAAGCTTA+TGG | 0.239916 | 5_4:+59276201 | Msa0860510:CDS |
GGTGTGTTGTTTGTCCAAAT+TGG | 0.287142 | 5_4:-59276346 | None:intergenic |
GTTCAAATGCAATGAGATTA+AGG | 0.289752 | 5_4:-59277856 | None:intergenic |
TGTACTGTCATCTAATTTCA+TGG | 0.291456 | 5_4:-59277822 | None:intergenic |
TTGGTCCTTATTACCATTAT+GGG | 0.293233 | 5_4:+59276179 | Msa0860510:CDS |
TCCTCCCCATAATGGTAATA+AGG | 0.297104 | 5_4:-59276184 | None:intergenic |
GCGATCCATGGAAATTTCTT+TGG | 0.298736 | 5_4:-59278038 | None:intergenic |
TGCTCAATTGTTCAACTCAT+TGG | 0.355403 | 5_4:+59278015 | Msa0860510:CDS |
CATTCCCAAGAGCATTGATT+AGG | 0.356438 | 5_4:-59277982 | None:intergenic |
TCCTTCTCATGAGCTATTGT+AGG | 0.360207 | 5_4:-59276070 | None:intergenic |
AGCATGTCACGCTTTATATA+TGG | 0.364935 | 5_4:-59276505 | None:intergenic |
ATTGAAATGATGATTCTTGA+TGG | 0.377780 | 5_4:+59276376 | Msa0860510:CDS |
GTACGAGTCTCTCAACTCTT+TGG | 0.379734 | 5_4:-59276311 | None:intergenic |
TTAAATTCTCCTCCCCATAA+TGG | 0.380138 | 5_4:-59276192 | None:intergenic |
CGTTGGAATAACAACTCAAT+AGG | 0.398267 | 5_4:-59276274 | None:intergenic |
AAACCCCAAGCAATTTCCTT+TGG | 0.409307 | 5_4:+59276160 | Msa0860510:CDS |
AAGAAGAAAATCGAAGAGTT+GGG | 0.409513 | 5_4:+59277563 | Msa0860510:CDS |
GAGGGTACTTTGTAAATTGA+AGG | 0.411214 | 5_4:-59276106 | None:intergenic |
AAGGAGGTATCCTTCATGAT+TGG | 0.412501 | 5_4:-59277536 | None:intergenic |
GGAAATTGCTTGGGGTTTGA+AGG | 0.414602 | 5_4:-59276155 | None:intergenic |
TGAAGCTTACTCCAGCCTCT+TGG | 0.417799 | 5_4:-59277736 | None:intergenic |
AGGACCAAAGGAAATTGCTT+GGG | 0.418110 | 5_4:-59276164 | None:intergenic |
GGGATCCTAATCAATGCTCT+TGG | 0.431163 | 5_4:+59277977 | Msa0860510:CDS |
ATCCCACTTCGACTGAGAAA+TGG | 0.438339 | 5_4:-59277959 | None:intergenic |
CAAGAAGAAAATCGAAGAGT+TGG | 0.442960 | 5_4:+59277562 | Msa0860510:CDS |
GATCGAAGGAAACGTCTTGG+AGG | 0.445532 | 5_4:-59277778 | None:intergenic |
AGCTCATGAGAAGGAACAAT+GGG | 0.450143 | 5_4:+59276078 | Msa0860510:CDS |
GAATAACAGTAAGAGCAAAA+AGG | 0.453820 | 5_4:-59278195 | None:intergenic |
TCATTCTTATCATAGTCAAT+CGG | 0.460865 | 5_4:-59276445 | None:intergenic |
CATTCTTATCATAGTCAATC+GGG | 0.465502 | 5_4:-59276444 | None:intergenic |
TTCATGATTGGGAATGGCCA+TGG | 0.466871 | 5_4:-59277524 | None:intergenic |
GCAATGGAGCTCCAAGAGGC+TGG | 0.474190 | 5_4:+59277725 | Msa0860510:CDS |
AGGAGGTATCCTTCATGATT+GGG | 0.478474 | 5_4:-59277535 | None:intergenic |
CTGTCATCTAATTTCATGGC+CGG | 0.481878 | 5_4:-59277818 | None:intergenic |
GATAAGAATGATCATGTGTT+TGG | 0.482566 | 5_4:+59276457 | Msa0860510:CDS |
AATGTATGAAGAACCGTCAT+AGG | 0.496770 | 5_4:-59276547 | None:intergenic |
AGCTGGTCAATACTATCAAA+AGG | 0.496857 | 5_4:+59278231 | Msa0860510:CDS |
GGATCCTAATCAATGCTCTT+GGG | 0.503806 | 5_4:+59277978 | Msa0860510:CDS |
TGGCCACTTGATTCAAGCGT+TGG | 0.507528 | 5_4:-59276291 | None:intergenic |
GAACGTCTCCACGTTGGAGC+TGG | 0.513702 | 5_4:+59277875 | Msa0860510:CDS |
AAGTTCTCCATCGCGATCCA+TGG | 0.513748 | 5_4:-59278050 | None:intergenic |
TCATAAAATTTCTTAACCCA+TGG | 0.516784 | 5_4:+59277507 | Msa0860510:CDS |
AAGGACCAAAGGAAATTGCT+TGG | 0.525829 | 5_4:-59276165 | None:intergenic |
GATCATGTGTTTGGTGAACA+TGG | 0.539005 | 5_4:+59276466 | Msa0860510:CDS |
CTCGATCGAAGGAAACGTCT+TGG | 0.541118 | 5_4:-59277781 | None:intergenic |
TCATGATTGGGAATGGCCAT+GGG | 0.543094 | 5_4:-59277523 | None:intergenic |
GTAGAAAACCCTGGAAAAGT+TGG | 0.544452 | 5_4:+59278104 | Msa0860510:CDS |
TGGTCCTTATTACCATTATG+GGG | 0.545288 | 5_4:+59276180 | Msa0860510:CDS |
TTATCTTATTCGATCTGCAA+TGG | 0.546155 | 5_4:+59277709 | Msa0860510:CDS |
GTCCAACTCCGTGACTTGTG+AGG | 0.551771 | 5_4:-59276125 | None:intergenic |
ATTGGCCAAAGAAATTTCCA+TGG | 0.557444 | 5_4:+59278033 | Msa0860510:CDS |
CACCATCATCGACACTGCTA+AGG | 0.559015 | 5_4:+59277931 | Msa0860510:CDS |
TGTCATCTAATTTCATGGCC+GGG | 0.559673 | 5_4:-59277817 | None:intergenic |
ATCCTTAGCAGTGTCGATGA+TGG | 0.562676 | 5_4:-59277933 | None:intergenic |
ATTCCAACGCTTGAATCAAG+TGG | 0.566802 | 5_4:+59276288 | Msa0860510:CDS |
TCGAGGTGTTCTTAGACTCC+CGG | 0.578966 | 5_4:+59277799 | Msa0860510:CDS |
GTATCCTTCATGATTGGGAA+TGG | 0.579571 | 5_4:-59277530 | None:intergenic |
TTCCATTTCTCAGTCGAAGT+GGG | 0.580235 | 5_4:+59277957 | Msa0860510:CDS |
CAAAGTACCCTCACAAGTCA+CGG | 0.580405 | 5_4:+59276117 | Msa0860510:CDS |
ATTCAGACTATATACACAGC+TGG | 0.584635 | 5_4:+59278214 | Msa0860510:CDS |
ACCCTCACAAGTCACGGAGT+TGG | 0.588381 | 5_4:+59276123 | Msa0860510:CDS |
GGACCAAAGGAAATTGCTTG+GGG | 0.594003 | 5_4:-59276163 | None:intergenic |
TCCAACTCCGTGACTTGTGA+GGG | 0.598517 | 5_4:-59276124 | None:intergenic |
AGAAGAAAATCGAAGAGTTG+GGG | 0.601535 | 5_4:+59277564 | Msa0860510:CDS |
TAGCTCATGAGAAGGAACAA+TGG | 0.605621 | 5_4:+59276077 | Msa0860510:CDS |
TCTAAGAACACCTCGATCGA+AGG | 0.606026 | 5_4:-59277792 | None:intergenic |
GTTCCATTTCTCAGTCGAAG+TGG | 0.609730 | 5_4:+59277956 | Msa0860510:CDS |
ATAATGGTAATAAGGACCAA+AGG | 0.614397 | 5_4:-59276176 | None:intergenic |
TCCTTATTACCATTATGGGG+AGG | 0.615898 | 5_4:+59276183 | Msa0860510:CDS |
ATGGCCATTCCCAATCATGA+AGG | 0.618512 | 5_4:+59277526 | Msa0860510:CDS |
CAAGACGTTTCCTTCGATCG+AGG | 0.619027 | 5_4:+59277782 | Msa0860510:CDS |
GCTTCAAGAAAAGCGAAACA+AGG | 0.619990 | 5_4:+59277753 | Msa0860510:CDS |
TCCTACAATAGCTCATGAGA+AGG | 0.627480 | 5_4:+59276069 | Msa0860510:CDS |
GAAATTTCCATGGATCGCGA+TGG | 0.630278 | 5_4:+59278043 | Msa0860510:CDS |
GCATTTGAACGTCTCCACGT+TGG | 0.633567 | 5_4:+59277869 | Msa0860510:CDS |
ACATGGAGTTAGAAATCAAG+TGG | 0.634087 | 5_4:+59276011 | None:intergenic |
AATGAAGAGATGAAGAACAA+TGG | 0.634106 | 5_4:+59276046 | Msa0860510:CDS |
AGCACTACTGTAGAAAACCC+TGG | 0.644845 | 5_4:+59278095 | Msa0860510:CDS |
ATGGAGAACTTGAGATGGTG+AGG | 0.645009 | 5_4:+59278062 | Msa0860510:CDS |
TGAGAATCAGATACCTATGA+CGG | 0.647100 | 5_4:+59276534 | Msa0860510:CDS |
ATCTGCAATGGAGCTCCAAG+AGG | 0.651366 | 5_4:+59277721 | Msa0860510:CDS |
TCGCGATGGAGAACTTGAGA+TGG | 0.652534 | 5_4:+59278057 | Msa0860510:CDS |
GTTTGAAATCAACATTGTGG+AGG | 0.654113 | 5_4:+59276576 | Msa0860510:CDS |
ACAAGAGACACCATAGCCCA+AGG | 0.660534 | 5_4:-59278160 | None:intergenic |
CCACGTTGGAGCTGGTAACG+AGG | 0.664570 | 5_4:+59277883 | Msa0860510:CDS |
ATCATGTGTTTGGTGAACAT+GGG | 0.674935 | 5_4:+59276467 | Msa0860510:CDS |
TGAGTTTGAAATCAACATTG+TGG | 0.693644 | 5_4:+59276573 | Msa0860510:CDS |
TGGAGAACTTGAGATGGTGA+GGG | 0.695825 | 5_4:+59278063 | Msa0860510:CDS |
CCTCGTTACCAGCTCCAACG+TGG | 0.696903 | 5_4:-59277883 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATTAAATAGGAAAAATAA+TGG | - | chr5_4:59277384-59277403 | None:intergenic | 10.0% |
!! | TAATTAAATAGGAAAAATAA+TGG | - | chr5_4:59277384-59277403 | None:intergenic | 10.0% |
!! | ATAATGAAACTTTATAATCT+AGG | - | chr5_4:59276675-59276694 | None:intergenic | 15.0% |
!! | TCTAATCTTTAAATACAAAA+TGG | - | chr5_4:59276765-59276784 | None:intergenic | 15.0% |
!! | AGCTATAAACATAATTAAAT+AGG | - | chr5_4:59277395-59277414 | None:intergenic | 15.0% |
!!! | AAGAAATTTGTTAAATTTTG+AGG | + | chr5_4:59277673-59277692 | Msa0860510:CDS | 15.0% |
!!! | AACATCTTTTATATGTTTTA+TGG | + | chr5_4:59277907-59277926 | Msa0860510:CDS | 15.0% |
!! | ATAATGAAACTTTATAATCT+AGG | - | chr5_4:59276675-59276694 | None:intergenic | 15.0% |
!! | TCTAATCTTTAAATACAAAA+TGG | - | chr5_4:59276765-59276784 | None:intergenic | 15.0% |
!! | AGCTATAAACATAATTAAAT+AGG | - | chr5_4:59277395-59277414 | None:intergenic | 15.0% |
!!! | AAGAAATTTGTTAAATTTTG+AGG | + | chr5_4:59277673-59277692 | Msa0860510:CDS | 15.0% |
!!! | AACATCTTTTATATGTTTTA+TGG | + | chr5_4:59277907-59277926 | Msa0860510:CDS | 15.0% |
!!! | TCTCTTTAAAAAATGAAGAA+GGG | - | chr5_4:59276245-59276264 | None:intergenic | 20.0% |
!!! | ATCTCTTTAAAAAATGAAGA+AGG | - | chr5_4:59276246-59276265 | None:intergenic | 20.0% |
!!! | ATCATCATTTCAATGAATTT+TGG | - | chr5_4:59276370-59276389 | None:intergenic | 20.0% |
!!! | GTAATTGATTTGTAAAATGT+TGG | - | chr5_4:59276643-59276662 | None:intergenic | 20.0% |
!! | AATAATGTATATTGTCAACT+AGG | + | chr5_4:59277000-59277019 | Msa0860510:intron | 20.0% |
!!! | AGTAGTACAATCTTTTTTTT+TGG | - | chr5_4:59277192-59277211 | None:intergenic | 20.0% |
!!! | CAATTTTATATGAAACATAC+AGG | + | chr5_4:59277454-59277473 | Msa0860510:intron | 20.0% |
!!! | TTTCTTTTTGATTCTTTTAG+CGG | - | chr5_4:59277659-59277678 | None:intergenic | 20.0% |
!!! | TCTCTTTAAAAAATGAAGAA+GGG | - | chr5_4:59276245-59276264 | None:intergenic | 20.0% |
!!! | ATCTCTTTAAAAAATGAAGA+AGG | - | chr5_4:59276246-59276265 | None:intergenic | 20.0% |
!!! | ATCATCATTTCAATGAATTT+TGG | - | chr5_4:59276370-59276389 | None:intergenic | 20.0% |
!!! | GTAATTGATTTGTAAAATGT+TGG | - | chr5_4:59276643-59276662 | None:intergenic | 20.0% |
!! | AATAATGTATATTGTCAACT+AGG | + | chr5_4:59277000-59277019 | Msa0860510:intron | 20.0% |
!!! | AGTAGTACAATCTTTTTTTT+TGG | - | chr5_4:59277192-59277211 | None:intergenic | 20.0% |
!!! | CAATTTTATATGAAACATAC+AGG | + | chr5_4:59277454-59277473 | Msa0860510:intron | 20.0% |
!!! | TTTCTTTTTGATTCTTTTAG+CGG | - | chr5_4:59277659-59277678 | None:intergenic | 20.0% |
!!! | CTTCATTTTTTAAAGAGATG+TGG | + | chr5_4:59276247-59276266 | Msa0860510:CDS | 25.0% |
! | ATTGAAATGATGATTCTTGA+TGG | + | chr5_4:59276376-59276395 | Msa0860510:CDS | 25.0% |
!!! | TTTCATTTTGGAGATTTTGA+GGG | + | chr5_4:59276402-59276421 | Msa0860510:CDS | 25.0% |
! | TCATTCTTATCATAGTCAAT+CGG | - | chr5_4:59276448-59276467 | None:intergenic | 25.0% |
! | CAAAGATAAAACATATGCAT+TGG | - | chr5_4:59276839-59276858 | None:intergenic | 25.0% |
! | AATATCATGTAAGATGTTGT+TGG | - | chr5_4:59276931-59276950 | None:intergenic | 25.0% |
! | TGTGAATGAGTAGAAAAATA+TGG | + | chr5_4:59276960-59276979 | Msa0860510:intron | 25.0% |
!! | TTTTTGCTTATAATAGTGAC+CGG | - | chr5_4:59277146-59277165 | None:intergenic | 25.0% |
! | CATTCATTTAATGATGTATG+TGG | + | chr5_4:59277072-59277091 | Msa0860510:intron | 25.0% |
! | CATTCATTTAATGATGTATG+TGG | - | chr5_4:59277072-59277091 | None:intergenic | 25.0% |
!! | TTTTTGCTTATAATAGTGAC+CGG | + | chr5_4:59277146-59277165 | Msa0860510:intron | 25.0% |
! | CCTTGAGTATAAAAATTCAA+AGG | - | chr5_4:59277338-59277357 | None:intergenic | 25.0% |
!! | CCTTTGAATTTTTATACTCA+AGG | + | chr5_4:59277335-59277354 | Msa0860510:intron | 25.0% |
!! | TAGAAAAATGTTGTGTTGAT+TGG | + | chr5_4:59277416-59277435 | Msa0860510:intron | 25.0% |
! | TCATAAAATTTCTTAACCCA+TGG | + | chr5_4:59277507-59277526 | Msa0860510:CDS | 25.0% |
!! | TACAGAAAAAGTATGATACA+AGG | + | chr5_4:59277611-59277630 | Msa0860510:CDS | 25.0% |
!!! | TTCTTTTTGATTCTTTTAGC+GGG | - | chr5_4:59277658-59277677 | None:intergenic | 25.0% |
!!! | CACTTATTTTAGAAATCCTT+GGG | + | chr5_4:59278144-59278163 | Msa0860510:CDS | 25.0% |
!!! | CTTCATTTTTTAAAGAGATG+TGG | + | chr5_4:59276247-59276266 | Msa0860510:CDS | 25.0% |
! | ATTGAAATGATGATTCTTGA+TGG | + | chr5_4:59276376-59276395 | Msa0860510:CDS | 25.0% |
!!! | TTTCATTTTGGAGATTTTGA+GGG | + | chr5_4:59276402-59276421 | Msa0860510:CDS | 25.0% |
! | TCATTCTTATCATAGTCAAT+CGG | - | chr5_4:59276448-59276467 | None:intergenic | 25.0% |
! | CAAAGATAAAACATATGCAT+TGG | - | chr5_4:59276839-59276858 | None:intergenic | 25.0% |
! | AATATCATGTAAGATGTTGT+TGG | - | chr5_4:59276931-59276950 | None:intergenic | 25.0% |
! | TGTGAATGAGTAGAAAAATA+TGG | + | chr5_4:59276960-59276979 | Msa0860510:intron | 25.0% |
!! | TTTTTGCTTATAATAGTGAC+CGG | - | chr5_4:59277146-59277165 | None:intergenic | 25.0% |
! | CATTCATTTAATGATGTATG+TGG | + | chr5_4:59277072-59277091 | Msa0860510:intron | 25.0% |
! | CATTCATTTAATGATGTATG+TGG | - | chr5_4:59277072-59277091 | None:intergenic | 25.0% |
!! | TTTTTGCTTATAATAGTGAC+CGG | + | chr5_4:59277146-59277165 | Msa0860510:intron | 25.0% |
! | CCTTGAGTATAAAAATTCAA+AGG | - | chr5_4:59277338-59277357 | None:intergenic | 25.0% |
!! | CCTTTGAATTTTTATACTCA+AGG | + | chr5_4:59277335-59277354 | Msa0860510:intron | 25.0% |
!! | TAGAAAAATGTTGTGTTGAT+TGG | + | chr5_4:59277416-59277435 | Msa0860510:intron | 25.0% |
! | TCATAAAATTTCTTAACCCA+TGG | + | chr5_4:59277507-59277526 | Msa0860510:CDS | 25.0% |
!! | TACAGAAAAAGTATGATACA+AGG | + | chr5_4:59277611-59277630 | Msa0860510:CDS | 25.0% |
!!! | TTCTTTTTGATTCTTTTAGC+GGG | - | chr5_4:59277658-59277677 | None:intergenic | 25.0% |
!!! | CACTTATTTTAGAAATCCTT+GGG | + | chr5_4:59278144-59278163 | Msa0860510:CDS | 25.0% |
AATGAAGAGATGAAGAACAA+TGG | + | chr5_4:59276046-59276065 | Msa0860510:CDS | 30.0% | |
ATAATGGTAATAAGGACCAA+AGG | - | chr5_4:59276179-59276198 | None:intergenic | 30.0% | |
TTTGGTCCTTATTACCATTA+TGG | + | chr5_4:59276178-59276197 | Msa0860510:CDS | 30.0% | |
TTGGTCCTTATTACCATTAT+GGG | + | chr5_4:59276179-59276198 | Msa0860510:CDS | 30.0% | |
!! | TCTTGATGGTTGTTTCATTT+TGG | + | chr5_4:59276390-59276409 | Msa0860510:CDS | 30.0% |
!! | GTTTCATTTTGGAGATTTTG+AGG | + | chr5_4:59276401-59276420 | Msa0860510:CDS | 30.0% |
CATTCTTATCATAGTCAATC+GGG | - | chr5_4:59276447-59276466 | None:intergenic | 30.0% | |
GATAAGAATGATCATGTGTT+TGG | + | chr5_4:59276457-59276476 | Msa0860510:CDS | 30.0% | |
! | TGAGTTTGAAATCAACATTG+TGG | + | chr5_4:59276573-59276592 | Msa0860510:CDS | 30.0% |
! | ACTTTATAATCTAGGACGAA+CGG | - | chr5_4:59276667-59276686 | None:intergenic | 30.0% |
AAAGGAAAAATTGTGTCTCA+AGG | - | chr5_4:59277320-59277339 | None:intergenic | 30.0% | |
! | TTCGATTTTCTTCTTGAACA+AGG | - | chr5_4:59277558-59277577 | None:intergenic | 30.0% |
AAGAAGAAAATCGAAGAGTT+GGG | + | chr5_4:59277563-59277582 | Msa0860510:CDS | 30.0% | |
!! | TCTTTTTGATTCTTTTAGCG+GGG | - | chr5_4:59277657-59277676 | None:intergenic | 30.0% |
TTATCTTATTCGATCTGCAA+TGG | + | chr5_4:59277709-59277728 | Msa0860510:CDS | 30.0% | |
TGTACTGTCATCTAATTTCA+TGG | - | chr5_4:59277825-59277844 | None:intergenic | 30.0% | |
GTTCAAATGCAATGAGATTA+AGG | - | chr5_4:59277859-59277878 | None:intergenic | 30.0% | |
!!! | GCACTTATTTTAGAAATCCT+TGG | + | chr5_4:59278143-59278162 | Msa0860510:CDS | 30.0% |
GAATAACAGTAAGAGCAAAA+AGG | - | chr5_4:59278198-59278217 | None:intergenic | 30.0% | |
AATGAAGAGATGAAGAACAA+TGG | + | chr5_4:59276046-59276065 | Msa0860510:CDS | 30.0% | |
ATAATGGTAATAAGGACCAA+AGG | - | chr5_4:59276179-59276198 | None:intergenic | 30.0% | |
TTTGGTCCTTATTACCATTA+TGG | + | chr5_4:59276178-59276197 | Msa0860510:CDS | 30.0% | |
TTGGTCCTTATTACCATTAT+GGG | + | chr5_4:59276179-59276198 | Msa0860510:CDS | 30.0% | |
!! | TCTTGATGGTTGTTTCATTT+TGG | + | chr5_4:59276390-59276409 | Msa0860510:CDS | 30.0% |
!! | GTTTCATTTTGGAGATTTTG+AGG | + | chr5_4:59276401-59276420 | Msa0860510:CDS | 30.0% |
CATTCTTATCATAGTCAATC+GGG | - | chr5_4:59276447-59276466 | None:intergenic | 30.0% | |
GATAAGAATGATCATGTGTT+TGG | + | chr5_4:59276457-59276476 | Msa0860510:CDS | 30.0% | |
! | TGAGTTTGAAATCAACATTG+TGG | + | chr5_4:59276573-59276592 | Msa0860510:CDS | 30.0% |
! | ACTTTATAATCTAGGACGAA+CGG | - | chr5_4:59276667-59276686 | None:intergenic | 30.0% |
AAAGGAAAAATTGTGTCTCA+AGG | - | chr5_4:59277320-59277339 | None:intergenic | 30.0% | |
! | TTCGATTTTCTTCTTGAACA+AGG | - | chr5_4:59277558-59277577 | None:intergenic | 30.0% |
AAGAAGAAAATCGAAGAGTT+GGG | + | chr5_4:59277563-59277582 | Msa0860510:CDS | 30.0% | |
!! | TCTTTTTGATTCTTTTAGCG+GGG | - | chr5_4:59277657-59277676 | None:intergenic | 30.0% |
TTATCTTATTCGATCTGCAA+TGG | + | chr5_4:59277709-59277728 | Msa0860510:CDS | 30.0% | |
TGTACTGTCATCTAATTTCA+TGG | - | chr5_4:59277825-59277844 | None:intergenic | 30.0% | |
GTTCAAATGCAATGAGATTA+AGG | - | chr5_4:59277859-59277878 | None:intergenic | 30.0% | |
!!! | GCACTTATTTTAGAAATCCT+TGG | + | chr5_4:59278143-59278162 | Msa0860510:CDS | 30.0% |
GAATAACAGTAAGAGCAAAA+AGG | - | chr5_4:59278198-59278217 | None:intergenic | 30.0% | |
!! | GAGGGTACTTTGTAAATTGA+AGG | - | chr5_4:59276109-59276128 | None:intergenic | 35.0% |
TGGTCCTTATTACCATTATG+GGG | + | chr5_4:59276180-59276199 | Msa0860510:CDS | 35.0% | |
TTAAATTCTCCTCCCCATAA+TGG | - | chr5_4:59276195-59276214 | None:intergenic | 35.0% | |
! | GGAGGAGAATTTAAAGCTTA+TGG | + | chr5_4:59276201-59276220 | Msa0860510:CDS | 35.0% |
CGTTGGAATAACAACTCAAT+AGG | - | chr5_4:59276277-59276296 | None:intergenic | 35.0% | |
ACAAGTCACTTGATCCAATT+TGG | + | chr5_4:59276332-59276351 | Msa0860510:CDS | 35.0% | |
! | ATCATGTGTTTGGTGAACAT+GGG | + | chr5_4:59276467-59276486 | Msa0860510:CDS | 35.0% |
AGCATGTCACGCTTTATATA+TGG | - | chr5_4:59276508-59276527 | None:intergenic | 35.0% | |
TGAGAATCAGATACCTATGA+CGG | + | chr5_4:59276534-59276553 | Msa0860510:CDS | 35.0% | |
AATGTATGAAGAACCGTCAT+AGG | - | chr5_4:59276550-59276569 | None:intergenic | 35.0% | |
! | GTTTGAAATCAACATTGTGG+AGG | + | chr5_4:59276576-59276595 | Msa0860510:CDS | 35.0% |
TCAACTAGGTCATCTATTGA+GGG | - | chr5_4:59276802-59276821 | None:intergenic | 35.0% | |
! | ATATGCATTGGTACATGTGT+CGG | - | chr5_4:59276827-59276846 | None:intergenic | 35.0% |
! | GATTTTCTTCTTGAACAAGG+AGG | - | chr5_4:59277555-59277574 | None:intergenic | 35.0% |
CAAGAAGAAAATCGAAGAGT+TGG | + | chr5_4:59277562-59277581 | Msa0860510:CDS | 35.0% | |
AGAAGAAAATCGAAGAGTTG+GGG | + | chr5_4:59277564-59277583 | Msa0860510:CDS | 35.0% | |
! | GGGGAAATGTATGCATATTT+TGG | + | chr5_4:59277583-59277602 | Msa0860510:CDS | 35.0% |
!! | CTTTTTGATTCTTTTAGCGG+GGG | - | chr5_4:59277656-59277675 | None:intergenic | 35.0% |
TGCTCAATTGTTCAACTCAT+TGG | + | chr5_4:59278015-59278034 | Msa0860510:CDS | 35.0% | |
ATTGGCCAAAGAAATTTCCA+TGG | + | chr5_4:59278033-59278052 | Msa0860510:CDS | 35.0% | |
!! | TTTTAGAAATCCTTGGGCTA+TGG | + | chr5_4:59278150-59278169 | Msa0860510:CDS | 35.0% |
ATTCAGACTATATACACAGC+TGG | + | chr5_4:59278214-59278233 | Msa0860510:CDS | 35.0% | |
AGCTGGTCAATACTATCAAA+AGG | + | chr5_4:59278231-59278250 | Msa0860510:CDS | 35.0% | |
!! | GAGGGTACTTTGTAAATTGA+AGG | - | chr5_4:59276109-59276128 | None:intergenic | 35.0% |
TGGTCCTTATTACCATTATG+GGG | + | chr5_4:59276180-59276199 | Msa0860510:CDS | 35.0% | |
TTAAATTCTCCTCCCCATAA+TGG | - | chr5_4:59276195-59276214 | None:intergenic | 35.0% | |
! | GGAGGAGAATTTAAAGCTTA+TGG | + | chr5_4:59276201-59276220 | Msa0860510:CDS | 35.0% |
CGTTGGAATAACAACTCAAT+AGG | - | chr5_4:59276277-59276296 | None:intergenic | 35.0% | |
ACAAGTCACTTGATCCAATT+TGG | + | chr5_4:59276332-59276351 | Msa0860510:CDS | 35.0% | |
! | ATCATGTGTTTGGTGAACAT+GGG | + | chr5_4:59276467-59276486 | Msa0860510:CDS | 35.0% |
AGCATGTCACGCTTTATATA+TGG | - | chr5_4:59276508-59276527 | None:intergenic | 35.0% | |
TGAGAATCAGATACCTATGA+CGG | + | chr5_4:59276534-59276553 | Msa0860510:CDS | 35.0% | |
AATGTATGAAGAACCGTCAT+AGG | - | chr5_4:59276550-59276569 | None:intergenic | 35.0% | |
! | GTTTGAAATCAACATTGTGG+AGG | + | chr5_4:59276576-59276595 | Msa0860510:CDS | 35.0% |
TCAACTAGGTCATCTATTGA+GGG | - | chr5_4:59276802-59276821 | None:intergenic | 35.0% | |
! | ATATGCATTGGTACATGTGT+CGG | - | chr5_4:59276827-59276846 | None:intergenic | 35.0% |
! | GATTTTCTTCTTGAACAAGG+AGG | - | chr5_4:59277555-59277574 | None:intergenic | 35.0% |
CAAGAAGAAAATCGAAGAGT+TGG | + | chr5_4:59277562-59277581 | Msa0860510:CDS | 35.0% | |
AGAAGAAAATCGAAGAGTTG+GGG | + | chr5_4:59277564-59277583 | Msa0860510:CDS | 35.0% | |
! | GGGGAAATGTATGCATATTT+TGG | + | chr5_4:59277583-59277602 | Msa0860510:CDS | 35.0% |
!! | CTTTTTGATTCTTTTAGCGG+GGG | - | chr5_4:59277656-59277675 | None:intergenic | 35.0% |
TGCTCAATTGTTCAACTCAT+TGG | + | chr5_4:59278015-59278034 | Msa0860510:CDS | 35.0% | |
ATTGGCCAAAGAAATTTCCA+TGG | + | chr5_4:59278033-59278052 | Msa0860510:CDS | 35.0% | |
!! | TTTTAGAAATCCTTGGGCTA+TGG | + | chr5_4:59278150-59278169 | Msa0860510:CDS | 35.0% |
ATTCAGACTATATACACAGC+TGG | + | chr5_4:59278214-59278233 | Msa0860510:CDS | 35.0% | |
AGCTGGTCAATACTATCAAA+AGG | + | chr5_4:59278231-59278250 | Msa0860510:CDS | 35.0% | |
TCCTACAATAGCTCATGAGA+AGG | + | chr5_4:59276069-59276088 | Msa0860510:CDS | 40.0% | |
TCCTTCTCATGAGCTATTGT+AGG | - | chr5_4:59276073-59276092 | None:intergenic | 40.0% | |
TAGCTCATGAGAAGGAACAA+TGG | + | chr5_4:59276077-59276096 | Msa0860510:CDS | 40.0% | |
AGCTCATGAGAAGGAACAAT+GGG | + | chr5_4:59276078-59276097 | Msa0860510:CDS | 40.0% | |
AAACCCCAAGCAATTTCCTT+TGG | + | chr5_4:59276160-59276179 | Msa0860510:CDS | 40.0% | |
AGGACCAAAGGAAATTGCTT+GGG | - | chr5_4:59276167-59276186 | None:intergenic | 40.0% | |
AAGGACCAAAGGAAATTGCT+TGG | - | chr5_4:59276168-59276187 | None:intergenic | 40.0% | |
TCCTTATTACCATTATGGGG+AGG | + | chr5_4:59276183-59276202 | Msa0860510:CDS | 40.0% | |
TCCTCCCCATAATGGTAATA+AGG | - | chr5_4:59276187-59276206 | None:intergenic | 40.0% | |
ATTCCAACGCTTGAATCAAG+TGG | + | chr5_4:59276288-59276307 | Msa0860510:CDS | 40.0% | |
!! | GGTGTGTTGTTTGTCCAAAT+TGG | - | chr5_4:59276349-59276368 | None:intergenic | 40.0% |
! | GATCATGTGTTTGGTGAACA+TGG | + | chr5_4:59276466-59276485 | Msa0860510:CDS | 40.0% |
GTCAACTAGGTCATCTATTG+AGG | - | chr5_4:59276803-59276822 | None:intergenic | 40.0% | |
TGCTTATAATAGTGACCGGA+GGG | - | chr5_4:59277150-59277169 | None:intergenic | 40.0% | |
TTGCTTATAATAGTGACCGG+AGG | - | chr5_4:59277149-59277168 | None:intergenic | 40.0% | |
TTGCTTATAATAGTGACCGG+AGG | + | chr5_4:59277149-59277168 | Msa0860510:intron | 40.0% | |
TGCTTATAATAGTGACCGGA+GGG | + | chr5_4:59277150-59277169 | Msa0860510:intron | 40.0% | |
TACAAAAGTAGTACACCCTC+CGG | - | chr5_4:59277168-59277187 | None:intergenic | 40.0% | |
GTATCCTTCATGATTGGGAA+TGG | - | chr5_4:59277533-59277552 | None:intergenic | 40.0% | |
!! | AGGAGGTATCCTTCATGATT+GGG | - | chr5_4:59277538-59277557 | None:intergenic | 40.0% |
!! | AAGGAGGTATCCTTCATGAT+TGG | - | chr5_4:59277539-59277558 | None:intergenic | 40.0% |
GCTTCAAGAAAAGCGAAACA+AGG | + | chr5_4:59277753-59277772 | Msa0860510:CDS | 40.0% | |
TGTCATCTAATTTCATGGCC+GGG | - | chr5_4:59277820-59277839 | None:intergenic | 40.0% | |
CTGTCATCTAATTTCATGGC+CGG | - | chr5_4:59277821-59277840 | None:intergenic | 40.0% | |
TTCCATTTCTCAGTCGAAGT+GGG | + | chr5_4:59277957-59277976 | Msa0860510:CDS | 40.0% | |
GGATCCTAATCAATGCTCTT+GGG | + | chr5_4:59277978-59277997 | Msa0860510:CDS | 40.0% | |
!! | CATTCCCAAGAGCATTGATT+AGG | - | chr5_4:59277985-59278004 | None:intergenic | 40.0% |
GCGATCCATGGAAATTTCTT+TGG | - | chr5_4:59278041-59278060 | None:intergenic | 40.0% | |
GTAGAAAACCCTGGAAAAGT+TGG | + | chr5_4:59278104-59278123 | Msa0860510:CDS | 40.0% | |
TCCTACAATAGCTCATGAGA+AGG | + | chr5_4:59276069-59276088 | Msa0860510:CDS | 40.0% | |
TCCTTCTCATGAGCTATTGT+AGG | - | chr5_4:59276073-59276092 | None:intergenic | 40.0% | |
TAGCTCATGAGAAGGAACAA+TGG | + | chr5_4:59276077-59276096 | Msa0860510:CDS | 40.0% | |
AGCTCATGAGAAGGAACAAT+GGG | + | chr5_4:59276078-59276097 | Msa0860510:CDS | 40.0% | |
AAACCCCAAGCAATTTCCTT+TGG | + | chr5_4:59276160-59276179 | Msa0860510:CDS | 40.0% | |
AGGACCAAAGGAAATTGCTT+GGG | - | chr5_4:59276167-59276186 | None:intergenic | 40.0% | |
AAGGACCAAAGGAAATTGCT+TGG | - | chr5_4:59276168-59276187 | None:intergenic | 40.0% | |
TCCTTATTACCATTATGGGG+AGG | + | chr5_4:59276183-59276202 | Msa0860510:CDS | 40.0% | |
TCCTCCCCATAATGGTAATA+AGG | - | chr5_4:59276187-59276206 | None:intergenic | 40.0% | |
ATTCCAACGCTTGAATCAAG+TGG | + | chr5_4:59276288-59276307 | Msa0860510:CDS | 40.0% | |
!! | GGTGTGTTGTTTGTCCAAAT+TGG | - | chr5_4:59276349-59276368 | None:intergenic | 40.0% |
! | GATCATGTGTTTGGTGAACA+TGG | + | chr5_4:59276466-59276485 | Msa0860510:CDS | 40.0% |
GTCAACTAGGTCATCTATTG+AGG | - | chr5_4:59276803-59276822 | None:intergenic | 40.0% | |
TGCTTATAATAGTGACCGGA+GGG | - | chr5_4:59277150-59277169 | None:intergenic | 40.0% | |
TTGCTTATAATAGTGACCGG+AGG | - | chr5_4:59277149-59277168 | None:intergenic | 40.0% | |
TTGCTTATAATAGTGACCGG+AGG | + | chr5_4:59277149-59277168 | Msa0860510:intron | 40.0% | |
TGCTTATAATAGTGACCGGA+GGG | + | chr5_4:59277150-59277169 | Msa0860510:intron | 40.0% | |
TACAAAAGTAGTACACCCTC+CGG | - | chr5_4:59277168-59277187 | None:intergenic | 40.0% | |
GTATCCTTCATGATTGGGAA+TGG | - | chr5_4:59277533-59277552 | None:intergenic | 40.0% | |
!! | AGGAGGTATCCTTCATGATT+GGG | - | chr5_4:59277538-59277557 | None:intergenic | 40.0% |
!! | AAGGAGGTATCCTTCATGAT+TGG | - | chr5_4:59277539-59277558 | None:intergenic | 40.0% |
GCTTCAAGAAAAGCGAAACA+AGG | + | chr5_4:59277753-59277772 | Msa0860510:CDS | 40.0% | |
TGTCATCTAATTTCATGGCC+GGG | - | chr5_4:59277820-59277839 | None:intergenic | 40.0% | |
CTGTCATCTAATTTCATGGC+CGG | - | chr5_4:59277821-59277840 | None:intergenic | 40.0% | |
TTCCATTTCTCAGTCGAAGT+GGG | + | chr5_4:59277957-59277976 | Msa0860510:CDS | 40.0% | |
GGATCCTAATCAATGCTCTT+GGG | + | chr5_4:59277978-59277997 | Msa0860510:CDS | 40.0% | |
!! | CATTCCCAAGAGCATTGATT+AGG | - | chr5_4:59277985-59278004 | None:intergenic | 40.0% |
GCGATCCATGGAAATTTCTT+TGG | - | chr5_4:59278041-59278060 | None:intergenic | 40.0% | |
GTAGAAAACCCTGGAAAAGT+TGG | + | chr5_4:59278104-59278123 | Msa0860510:CDS | 40.0% | |
! | CAAAGTACCCTCACAAGTCA+CGG | + | chr5_4:59276117-59276136 | Msa0860510:CDS | 45.0% |
!!! | CTTGGGGTTTGAAGGCATTT+TGG | - | chr5_4:59276150-59276169 | None:intergenic | 45.0% |
GGAAATTGCTTGGGGTTTGA+AGG | - | chr5_4:59276158-59276177 | None:intergenic | 45.0% | |
GGACCAAAGGAAATTGCTTG+GGG | - | chr5_4:59276166-59276185 | None:intergenic | 45.0% | |
GTACGAGTCTCTCAACTCTT+TGG | - | chr5_4:59276314-59276333 | None:intergenic | 45.0% | |
CTAGGTCATCTATTGAGGGA+CGG | - | chr5_4:59276798-59276817 | None:intergenic | 45.0% | |
TACATGTGTCGGAGTCAACT+AGG | - | chr5_4:59276816-59276835 | None:intergenic | 45.0% | |
TCATGATTGGGAATGGCCAT+GGG | - | chr5_4:59277526-59277545 | None:intergenic | 45.0% | |
TTCATGATTGGGAATGGCCA+TGG | - | chr5_4:59277527-59277546 | None:intergenic | 45.0% | |
ATGGCCATTCCCAATCATGA+AGG | + | chr5_4:59277526-59277545 | Msa0860510:CDS | 45.0% | |
!!! | ATTCTTTTAGCGGGGGTGTT+GGG | - | chr5_4:59277649-59277668 | None:intergenic | 45.0% |
TCTAAGAACACCTCGATCGA+AGG | - | chr5_4:59277795-59277814 | None:intergenic | 45.0% | |
!! | ATCCTTAGCAGTGTCGATGA+TGG | - | chr5_4:59277936-59277955 | None:intergenic | 45.0% |
GTTCCATTTCTCAGTCGAAG+TGG | + | chr5_4:59277956-59277975 | Msa0860510:CDS | 45.0% | |
ATCCCACTTCGACTGAGAAA+TGG | - | chr5_4:59277962-59277981 | None:intergenic | 45.0% | |
GGGATCCTAATCAATGCTCT+TGG | + | chr5_4:59277977-59277996 | Msa0860510:CDS | 45.0% | |
GAAATTTCCATGGATCGCGA+TGG | + | chr5_4:59278043-59278062 | Msa0860510:CDS | 45.0% | |
ATGGAGAACTTGAGATGGTG+AGG | + | chr5_4:59278062-59278081 | Msa0860510:CDS | 45.0% | |
TGGAGAACTTGAGATGGTGA+GGG | + | chr5_4:59278063-59278082 | Msa0860510:CDS | 45.0% | |
AGCACTACTGTAGAAAACCC+TGG | + | chr5_4:59278095-59278114 | Msa0860510:CDS | 45.0% | |
! | CAAAGTACCCTCACAAGTCA+CGG | + | chr5_4:59276117-59276136 | Msa0860510:CDS | 45.0% |
!!! | CTTGGGGTTTGAAGGCATTT+TGG | - | chr5_4:59276150-59276169 | None:intergenic | 45.0% |
GGAAATTGCTTGGGGTTTGA+AGG | - | chr5_4:59276158-59276177 | None:intergenic | 45.0% | |
GGACCAAAGGAAATTGCTTG+GGG | - | chr5_4:59276166-59276185 | None:intergenic | 45.0% | |
GTACGAGTCTCTCAACTCTT+TGG | - | chr5_4:59276314-59276333 | None:intergenic | 45.0% | |
CTAGGTCATCTATTGAGGGA+CGG | - | chr5_4:59276798-59276817 | None:intergenic | 45.0% | |
TACATGTGTCGGAGTCAACT+AGG | - | chr5_4:59276816-59276835 | None:intergenic | 45.0% | |
TCATGATTGGGAATGGCCAT+GGG | - | chr5_4:59277526-59277545 | None:intergenic | 45.0% | |
TTCATGATTGGGAATGGCCA+TGG | - | chr5_4:59277527-59277546 | None:intergenic | 45.0% | |
ATGGCCATTCCCAATCATGA+AGG | + | chr5_4:59277526-59277545 | Msa0860510:CDS | 45.0% | |
!!! | ATTCTTTTAGCGGGGGTGTT+GGG | - | chr5_4:59277649-59277668 | None:intergenic | 45.0% |
TCTAAGAACACCTCGATCGA+AGG | - | chr5_4:59277795-59277814 | None:intergenic | 45.0% | |
!! | ATCCTTAGCAGTGTCGATGA+TGG | - | chr5_4:59277936-59277955 | None:intergenic | 45.0% |
GTTCCATTTCTCAGTCGAAG+TGG | + | chr5_4:59277956-59277975 | Msa0860510:CDS | 45.0% | |
ATCCCACTTCGACTGAGAAA+TGG | - | chr5_4:59277962-59277981 | None:intergenic | 45.0% | |
GGGATCCTAATCAATGCTCT+TGG | + | chr5_4:59277977-59277996 | Msa0860510:CDS | 45.0% | |
GAAATTTCCATGGATCGCGA+TGG | + | chr5_4:59278043-59278062 | Msa0860510:CDS | 45.0% | |
ATGGAGAACTTGAGATGGTG+AGG | + | chr5_4:59278062-59278081 | Msa0860510:CDS | 45.0% | |
TGGAGAACTTGAGATGGTGA+GGG | + | chr5_4:59278063-59278082 | Msa0860510:CDS | 45.0% | |
AGCACTACTGTAGAAAACCC+TGG | + | chr5_4:59278095-59278114 | Msa0860510:CDS | 45.0% | |
! | TCCAACTCCGTGACTTGTGA+GGG | - | chr5_4:59276127-59276146 | None:intergenic | 50.0% |
TGGCCACTTGATTCAAGCGT+TGG | - | chr5_4:59276294-59276313 | None:intergenic | 50.0% | |
GTCATCTATTGAGGGACGGA+GGG | - | chr5_4:59276794-59276813 | None:intergenic | 50.0% | |
CAACTAGGTTGTACACCCTC+CGG | + | chr5_4:59277015-59277034 | Msa0860510:intron | 50.0% | |
!! | GATTCTTTTAGCGGGGGTGT+TGG | - | chr5_4:59277650-59277669 | None:intergenic | 50.0% |
ATCTGCAATGGAGCTCCAAG+AGG | + | chr5_4:59277721-59277740 | Msa0860510:CDS | 50.0% | |
TGAAGCTTACTCCAGCCTCT+TGG | - | chr5_4:59277739-59277758 | None:intergenic | 50.0% | |
GATCGAAGGAAACGTCTTGG+AGG | - | chr5_4:59277781-59277800 | None:intergenic | 50.0% | |
CTCGATCGAAGGAAACGTCT+TGG | - | chr5_4:59277784-59277803 | None:intergenic | 50.0% | |
CAAGACGTTTCCTTCGATCG+AGG | + | chr5_4:59277782-59277801 | Msa0860510:CDS | 50.0% | |
! | TCGAGGTGTTCTTAGACTCC+CGG | + | chr5_4:59277799-59277818 | Msa0860510:CDS | 50.0% |
GCATTTGAACGTCTCCACGT+TGG | + | chr5_4:59277869-59277888 | Msa0860510:CDS | 50.0% | |
CACCATCATCGACACTGCTA+AGG | + | chr5_4:59277931-59277950 | Msa0860510:CDS | 50.0% | |
AAGTTCTCCATCGCGATCCA+TGG | - | chr5_4:59278053-59278072 | None:intergenic | 50.0% | |
TCGCGATGGAGAACTTGAGA+TGG | + | chr5_4:59278057-59278076 | Msa0860510:CDS | 50.0% | |
! | CTTGCACGCCAACTTTTCCA+GGG | - | chr5_4:59278115-59278134 | None:intergenic | 50.0% |
! | ACTTGCACGCCAACTTTTCC+AGG | - | chr5_4:59278116-59278135 | None:intergenic | 50.0% |
ACAAGAGACACCATAGCCCA+AGG | - | chr5_4:59278163-59278182 | None:intergenic | 50.0% | |
! | TCCAACTCCGTGACTTGTGA+GGG | - | chr5_4:59276127-59276146 | None:intergenic | 50.0% |
TGGCCACTTGATTCAAGCGT+TGG | - | chr5_4:59276294-59276313 | None:intergenic | 50.0% | |
GTCATCTATTGAGGGACGGA+GGG | - | chr5_4:59276794-59276813 | None:intergenic | 50.0% | |
CAACTAGGTTGTACACCCTC+CGG | + | chr5_4:59277015-59277034 | Msa0860510:intron | 50.0% | |
!! | GATTCTTTTAGCGGGGGTGT+TGG | - | chr5_4:59277650-59277669 | None:intergenic | 50.0% |
ATCTGCAATGGAGCTCCAAG+AGG | + | chr5_4:59277721-59277740 | Msa0860510:CDS | 50.0% | |
TGAAGCTTACTCCAGCCTCT+TGG | - | chr5_4:59277739-59277758 | None:intergenic | 50.0% | |
GATCGAAGGAAACGTCTTGG+AGG | - | chr5_4:59277781-59277800 | None:intergenic | 50.0% | |
CTCGATCGAAGGAAACGTCT+TGG | - | chr5_4:59277784-59277803 | None:intergenic | 50.0% | |
CAAGACGTTTCCTTCGATCG+AGG | + | chr5_4:59277782-59277801 | Msa0860510:CDS | 50.0% | |
! | TCGAGGTGTTCTTAGACTCC+CGG | + | chr5_4:59277799-59277818 | Msa0860510:CDS | 50.0% |
GCATTTGAACGTCTCCACGT+TGG | + | chr5_4:59277869-59277888 | Msa0860510:CDS | 50.0% | |
CACCATCATCGACACTGCTA+AGG | + | chr5_4:59277931-59277950 | Msa0860510:CDS | 50.0% | |
AAGTTCTCCATCGCGATCCA+TGG | - | chr5_4:59278053-59278072 | None:intergenic | 50.0% | |
TCGCGATGGAGAACTTGAGA+TGG | + | chr5_4:59278057-59278076 | Msa0860510:CDS | 50.0% | |
! | CTTGCACGCCAACTTTTCCA+GGG | - | chr5_4:59278115-59278134 | None:intergenic | 50.0% |
! | ACTTGCACGCCAACTTTTCC+AGG | - | chr5_4:59278116-59278135 | None:intergenic | 50.0% |
ACAAGAGACACCATAGCCCA+AGG | - | chr5_4:59278163-59278182 | None:intergenic | 50.0% | |
ACCCTCACAAGTCACGGAGT+TGG | + | chr5_4:59276123-59276142 | Msa0860510:CDS | 55.0% | |
! | GTCCAACTCCGTGACTTGTG+AGG | - | chr5_4:59276128-59276147 | None:intergenic | 55.0% |
GGTCATCTATTGAGGGACGG+AGG | - | chr5_4:59276795-59276814 | None:intergenic | 55.0% | |
ACCCTCACAAGTCACGGAGT+TGG | + | chr5_4:59276123-59276142 | Msa0860510:CDS | 55.0% | |
! | GTCCAACTCCGTGACTTGTG+AGG | - | chr5_4:59276128-59276147 | None:intergenic | 55.0% |
GGTCATCTATTGAGGGACGG+AGG | - | chr5_4:59276795-59276814 | None:intergenic | 55.0% | |
!!! | CTTTTAGCGGGGGTGTTGGG+TGG | - | chr5_4:59277646-59277665 | None:intergenic | 60.0% |
GCAATGGAGCTCCAAGAGGC+TGG | + | chr5_4:59277725-59277744 | Msa0860510:CDS | 60.0% | |
GAACGTCTCCACGTTGGAGC+TGG | + | chr5_4:59277875-59277894 | Msa0860510:CDS | 60.0% | |
CCTCGTTACCAGCTCCAACG+TGG | - | chr5_4:59277886-59277905 | None:intergenic | 60.0% | |
! | CCACGTTGGAGCTGGTAACG+AGG | + | chr5_4:59277883-59277902 | Msa0860510:CDS | 60.0% |
!!! | CTTTTAGCGGGGGTGTTGGG+TGG | - | chr5_4:59277646-59277665 | None:intergenic | 60.0% |
GCAATGGAGCTCCAAGAGGC+TGG | + | chr5_4:59277725-59277744 | Msa0860510:CDS | 60.0% | |
GAACGTCTCCACGTTGGAGC+TGG | + | chr5_4:59277875-59277894 | Msa0860510:CDS | 60.0% | |
CCTCGTTACCAGCTCCAACG+TGG | - | chr5_4:59277886-59277905 | None:intergenic | 60.0% | |
! | CCACGTTGGAGCTGGTAACG+AGG | + | chr5_4:59277883-59277902 | Msa0860510:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_4 | gene | 59276013 | 59278261 | 59276013 | ID=Msa0860510;Name=Msa0860510 |
chr5_4 | mRNA | 59276013 | 59278261 | 59276013 | ID=Msa0860510-mRNA-1;Parent=Msa0860510;Name=Msa0860510-mRNA-1;_AED=0.02;_eAED=0.03;_QI=0|0|0|1|1|1|2|0|456 |
chr5_4 | exon | 59276013 | 59276597 | 59276013 | ID=Msa0860510-mRNA-1:exon:18120;Parent=Msa0860510-mRNA-1 |
chr5_4 | exon | 59277476 | 59278261 | 59277476 | ID=Msa0860510-mRNA-1:exon:18121;Parent=Msa0860510-mRNA-1 |
chr5_4 | CDS | 59276013 | 59276597 | 59276013 | ID=Msa0860510-mRNA-1:cds;Parent=Msa0860510-mRNA-1 |
chr5_4 | CDS | 59277476 | 59278261 | 59277476 | ID=Msa0860510-mRNA-1:cds;Parent=Msa0860510-mRNA-1 |
Gene Sequence |
Protein sequence |