AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0491780


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0491780 MtrunA17_Chr3g0083921 95.397 239 11 0 1 239 76 314 7.54e-171 473
Msa0491780 MtrunA17_Chr8g0352621 69.038 239 74 0 1 239 75 313 2.49e-125 357
Msa0491780 MtrunA17_Chr3g0083901 68.354 237 75 0 1 237 76 312 3.22e-120 345
Msa0491780 MtrunA17_Chr8g0352611 68.619 239 74 1 1 239 76 313 2.92e-117 337
Msa0491780 MtrunA17_Chr8g0352591 66.245 237 69 1 1 237 76 301 1.58e-109 317
Msa0491780 MtrunA17_Chr8g0382281 50.847 236 116 0 4 239 80 315 2.42e-73 225
Msa0491780 MtrunA17_Chr2g0293441 45.957 235 127 0 4 238 79 313 9.26e-73 224
Msa0491780 MtrunA17_Chr5g0425971 45.923 233 126 0 4 236 80 312 1.03e-68 214
Msa0491780 MtrunA17_Chr8g0352571 38.819 237 142 1 4 237 80 316 3.34e-50 166
Msa0491780 MtrunA17_Chr8g0352581 38.589 241 133 4 4 237 80 312 3.65e-46 155
Msa0491780 MtrunA17_Chr8g0393281 35.443 237 151 2 4 239 80 315 2.88e-43 148
Msa0491780 MtrunA17_Chr1g0162071 33.333 234 154 2 4 236 80 312 2.36e-42 146
Msa0491780 MtrunA17_Chr3g0084021 96.970 66 2 0 69 134 5 70 4.27e-41 135
Msa0491780 MtrunA17_Chr6g0479411 35.319 235 148 4 4 236 107 339 7.19e-41 142
Msa0491780 MtrunA17_Chr6g0479421 36.596 235 145 4 4 236 80 312 6.95e-40 139
Msa0491780 MtrunA17_Chr1g0210981 36.321 212 134 1 26 236 101 312 3.01e-38 135
Msa0491780 MtrunA17_Chr6g0479391 33.333 234 154 2 4 236 80 312 1.52e-35 128
Msa0491780 MtrunA17_Chr6g0461141 28.085 235 165 3 4 234 73 307 2.48e-28 109
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0491780 AT5G12380.1 53.648 233 108 0 4 236 79 311 1.09e-86 260
Msa0491780 AT5G10230.1 50.215 233 116 0 4 236 80 312 3.27e-76 233
Msa0491780 AT1G35720.1 49.367 237 119 1 4 239 80 316 3.88e-76 233
Msa0491780 AT5G10220.1 50.213 235 115 1 4 236 80 314 1.32e-73 226
Msa0491780 AT5G65020.2 47.863 234 121 1 4 236 65 298 1.56e-71 221
Msa0491780 AT5G65020.1 47.863 234 121 1 4 236 80 313 2.44e-71 221
Msa0491780 AT2G38760.1 41.841 239 133 2 4 236 80 318 2.15e-57 185
Msa0491780 AT1G68090.1 32.906 234 156 1 4 236 80 313 6.41e-40 140
Msa0491780 AT2G38750.2 34.979 243 145 5 4 239 66 302 2.36e-38 135
Msa0491780 AT2G38750.1 34.979 243 145 5 4 239 83 319 3.23e-38 135
Msa0491780 AT1G68090.2 29.240 171 120 1 4 173 80 250 6.64e-22 91.3

Find 51 sgRNAs with CRISPR-Local

Find 603 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGGGTTGGTGAGTTCATTT+AGG 0.261066 3_4:+14733682 Msa0491780:CDS
TAGCAACTTTCAATTGCTAT+AGG 0.339675 3_4:+14733838 Msa0491780:CDS
AGCAATGTATAGATGGATAT+TGG 0.374279 3_4:+14733266 None:intergenic
AGCAGAACGTGAAGCTTTGT+TGG 0.406487 3_4:+14733293 Msa0491780:CDS
CTCAAATTGAAAAGTTCATC+AGG 0.424291 3_4:-14733384 None:intergenic
GTGAGTTCATTTAGGTATGG+TGG 0.426066 3_4:+14733690 Msa0491780:CDS
TACAGAGAGCAATGTATAGA+TGG 0.433157 3_4:+14733259 None:intergenic
CTCCAAGTCCTTCTCAGCCC+TGG 0.436107 3_4:-14743349 None:intergenic
AACAAAGCTTCACGTTCTGC+TGG 0.445499 3_4:-14733291 None:intergenic
GAAATTTCTCCTTACTCTGA+TGG 0.445732 3_4:+14743452 Msa0491780:CDS
TTGCAGAAATTGTCCGATGA+AGG 0.446312 3_4:+14742686 Msa0491780:intron
ACGAAGATGGCCATTGGTAT+TGG 0.448667 3_4:-14733457 None:intergenic
ATGGTCATTGATGCAGCTAA+TGG 0.457405 3_4:-14742741 None:intergenic
GAGTGAGGTCAATGCAAGTT+TGG 0.459503 3_4:+14733713 Msa0491780:CDS
TACCAATGGCCATCTTCGTC+AGG 0.461380 3_4:+14733461 Msa0491780:CDS
CTTCTCTCCCCATCAGAGTA+AGG 0.466949 3_4:-14743461 None:intergenic
AAATTTCTCCTTACTCTGAT+GGG 0.467181 3_4:+14743453 Msa0491780:CDS
CAATCGATATAAACGTTCCT+TGG 0.468735 3_4:+14733419 Msa0491780:CDS
CACCAGGGCTGAGAAGGACT+TGG 0.474764 3_4:+14743347 Msa0491780:CDS
TTGGTGAGTTCATTTAGGTA+TGG 0.492091 3_4:+14733687 Msa0491780:CDS
TGAGTTCATTTAGGTATGGT+GGG 0.493783 3_4:+14733691 Msa0491780:CDS
TATGACTTGCCTGACGAAGA+TGG 0.518374 3_4:-14733470 None:intergenic
CGCAATGCGATGGAAACTGT+TGG 0.526003 3_4:+14743291 Msa0491780:CDS
CCATAATAAGTACTATGAAA+AGG 0.528583 3_4:+14742760 Msa0491780:CDS
GATTGTCACCAGGGCTGAGA+AGG 0.535488 3_4:+14743341 Msa0491780:CDS
CATAAACTATCATGTGATTG+TGG 0.538495 3_4:+14733341 Msa0491780:CDS
TGGCCACTGCATGCTCAAGT+TGG 0.542716 3_4:-14743407 None:intergenic
CAGGGCTGAGAAGGACTTGG+AGG 0.543973 3_4:+14743350 Msa0491780:CDS
TCGATATAAACGTTCCTTGG+AGG 0.552747 3_4:+14733422 Msa0491780:CDS
CCATGGCATTGCTATCACTA+AGG 0.565040 3_4:+14733866 Msa0491780:CDS
TGCCTGACGAAGATGGCCAT+TGG 0.588390 3_4:-14733463 None:intergenic
GGACTTGGAGGACATAAGAA+AGG 0.590987 3_4:+14743362 Msa0491780:CDS
GTAGGTTCTACGCAATGCGA+TGG 0.594107 3_4:+14743281 Msa0491780:intron
GGTAGCCACGTCTTCCTCCA+AGG 0.596837 3_4:-14733436 None:intergenic
TCACCCGTGTGATTGTCACC+AGG 0.598018 3_4:+14743331 Msa0491780:CDS
AATTTCTCCTTACTCTGATG+GGG 0.599634 3_4:+14743454 Msa0491780:CDS
CAGCCCTGGTGACAATCACA+CGG 0.607678 3_4:-14743335 None:intergenic
ATTTAGGTATGGTGGGAGTG+AGG 0.611981 3_4:+14733698 Msa0491780:CDS
ACGTTCCTTGGAGGAAGACG+TGG 0.626271 3_4:+14733431 Msa0491780:CDS
AAAGCTATCAGATCCTTCAT+CGG 0.630218 3_4:-14742699 None:intergenic
ACGGGTGAGTACATCCTCAT+CGG 0.635961 3_4:-14743316 None:intergenic
CCTTAGTGATAGCAATGCCA+TGG 0.636508 3_4:-14733866 None:intergenic
CACCCGTGTGATTGTCACCA+GGG 0.641846 3_4:+14743332 Msa0491780:CDS
GACGTGGCTACCAATACCAA+TGG 0.642397 3_4:+14733447 Msa0491780:CDS
AATTGCTATAGGCATGACCA+TGG 0.650398 3_4:+14733849 Msa0491780:CDS
TAATCAGAATTCTTACAACA+AGG 0.662171 3_4:+14733799 Msa0491780:CDS
TGAAGCTGATATGCTTCATG+AGG 0.671008 3_4:+14733743 Msa0491780:CDS
TGTCCAACTTGAGCATGCAG+TGG 0.682514 3_4:+14743404 Msa0491780:CDS
AGGATCTGATAGCTTTCACA+AGG 0.686055 3_4:+14742706 Msa0491780:CDS
AGCCCTGGTGACAATCACAC+GGG 0.718478 3_4:-14743334 None:intergenic
GGAAACTGTTGGAACCGATG+AGG 0.724042 3_4:+14743302 Msa0491780:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTATTTATTAATTTTATT+AGG - chr3_4:14741283-14741302 None:intergenic 0.0%
!! AATAAAATTAATAAATAATA+AGG + chr3_4:14741283-14741302 Msa0491780:intron 0.0%
!!! TATTATTTATTAATTTTATT+AGG - chr3_4:14741283-14741302 None:intergenic 0.0%
!! AATAAAATTAATAAATAATA+AGG + chr3_4:14741283-14741302 Msa0491780:intron 0.0%
!! CATTATTATAAAAACATTTA+AGG - chr3_4:14733903-14733922 None:intergenic 10.0%
!!! ATTTTGTAAAAATAATGAAA+AGG - chr3_4:14735332-14735351 None:intergenic 10.0%
!! ACATCAAAATAAAAATAAAT+GGG + chr3_4:14735742-14735761 Msa0491780:intron 10.0%
!! AGAAAATAAATTTAACAAAA+TGG - chr3_4:14736231-14736250 None:intergenic 10.0%
!!! ATTTTTATTTAATTGACTTT+GGG - chr3_4:14736282-14736301 None:intergenic 10.0%
!!! AATTTTTATTTAATTGACTT+TGG - chr3_4:14736283-14736302 None:intergenic 10.0%
!!! TCAAAATTCTTTTTTTTTTT+TGG - chr3_4:14737109-14737128 None:intergenic 10.0%
!! AATAATAATAAATATCATCA+AGG - chr3_4:14737133-14737152 None:intergenic 10.0%
!!! TTTTAATCTTCAATTATATT+TGG - chr3_4:14737975-14737994 None:intergenic 10.0%
!!! TTTTCTAAATAAATTATGAA+TGG + chr3_4:14738336-14738355 Msa0491780:intron 10.0%
!!! TTTTTTTTAACAAATCAAAA+TGG + chr3_4:14738622-14738641 Msa0491780:intron 10.0%
!!! TATGTTTTTTTGAATTATAT+AGG - chr3_4:14740071-14740090 None:intergenic 10.0%
!! ATAAAATATCCATATATTAT+AGG + chr3_4:14740196-14740215 Msa0491780:intron 10.0%
!! TAAAATATCCATATATTATA+GGG + chr3_4:14740197-14740216 Msa0491780:intron 10.0%
!! ATAAAATATCCATATATTAT+AGG + chr3_4:14740196-14740215 Msa0491780:intron 10.0%
!! TAAAATATCCATATATTATA+GGG + chr3_4:14740197-14740216 Msa0491780:intron 10.0%
!! ATTAATAAATAATAAGGATA+AGG + chr3_4:14741289-14741308 Msa0491780:intron 10.0%
!! ATTAATAAATAATAAGGATA+AGG + chr3_4:14741289-14741308 Msa0491780:intron 10.0%
!! CTTAACAAAATTAATAAATA+AGG + chr3_4:14741682-14741701 Msa0491780:intron 10.0%
!!! TTTTTTTTTTTTATGTATGT+TGG + chr3_4:14743077-14743096 Msa0491780:intron 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_4:14734270-14734289 Msa0491780:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_4:14734270-14734289 Msa0491780:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_4:14734270-14734289 Msa0491780:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_4:14734270-14734289 Msa0491780:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_4:14734270-14734289 Msa0491780:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_4:14734270-14734289 Msa0491780:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_4:14734270-14734289 Msa0491780:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_4:14734270-14734289 Msa0491780:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_4:14734270-14734289 Msa0491780:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_4:14734270-14734289 Msa0491780:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_4:14734270-14734289 Msa0491780:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_4:14734270-14734289 Msa0491780:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_4:14734270-14734289 Msa0491780:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_4:14734270-14734289 Msa0491780:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_4:14734270-14734289 Msa0491780:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_4:14734270-14734289 Msa0491780:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_4:14734270-14734289 Msa0491780:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_4:14734270-14734289 Msa0491780:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_4:14734270-14734289 Msa0491780:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_4:14734270-14734289 Msa0491780:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_4:14734270-14734289 Msa0491780:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_4:14734270-14734289 Msa0491780:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_4:14734270-14734289 Msa0491780:intron 100.0%
!! ATATCTCTTATGAATAAAAT+CGG - chr3_4:14733616-14733635 None:intergenic 15.0%
!! ATAAAAACATTTAAGGATAT+TGG - chr3_4:14733896-14733915 None:intergenic 15.0%
!! ATTTCGTAAAAATAATGAAA+TGG + chr3_4:14734654-14734673 Msa0491780:intron 15.0%
!!! ATTAATTACTTTTTAGCAAA+TGG - chr3_4:14734829-14734848 None:intergenic 15.0%
!!! TTTATAATTTGCCAAATATA+TGG + chr3_4:14735459-14735478 Msa0491780:intron 15.0%
!! TGTAACCAAAAAAAAATAAA+AGG + chr3_4:14735516-14735535 Msa0491780:intron 15.0%
!!! TTATGCCTTTTATTTTTTTT+TGG - chr3_4:14735524-14735543 None:intergenic 15.0%
!!! TTATTTTTATTTTGATGTCA+TGG - chr3_4:14735740-14735759 None:intergenic 15.0%
!! GACATCAAAATAAAAATAAA+TGG + chr3_4:14735741-14735760 Msa0491780:intron 15.0%
!! ATTTAACAAAATGGTTATAT+TGG - chr3_4:14736222-14736241 None:intergenic 15.0%
!! ACATATCTATTAATTCATTA+AGG + chr3_4:14738297-14738316 Msa0491780:intron 15.0%
!! CATATCTATTAATTCATTAA+GGG + chr3_4:14738298-14738317 Msa0491780:intron 15.0%
!! AAGATTATGTATAAAATGAT+TGG - chr3_4:14739064-14739083 None:intergenic 15.0%
!!! ATGATTAGAAAACAAATTTT+TGG - chr3_4:14739091-14739110 None:intergenic 15.0%
!! TAAATGTATAGAAAATGTTT+AGG - chr3_4:14739132-14739151 None:intergenic 15.0%
!! AGGCATAAAATAAAATTTAA+AGG + chr3_4:14739690-14739709 Msa0491780:intron 15.0%
!! GGCATAAAATAAAATTTAAA+GGG + chr3_4:14739691-14739710 Msa0491780:intron 15.0%
!! CTTAAAAAAAAAATGTGTTA+AGG - chr3_4:14739805-14739824 None:intergenic 15.0%
!!! CTTAACACATTTTTTTTTTA+AGG + chr3_4:14739803-14739822 Msa0491780:intron 15.0%
!! CATTTCTACTAATTATTAAA+TGG - chr3_4:14739904-14739923 None:intergenic 15.0%
!!! TTTAACTTTTTCAAAAACAA+TGG - chr3_4:14740407-14740426 None:intergenic 15.0%
!! ATAGTTATTAATTAGATTAG+TGG + chr3_4:14740640-14740659 Msa0491780:intron 15.0%
!!! TTATTAGTTATGTTAGTTTT+AGG + chr3_4:14740681-14740700 Msa0491780:intron 15.0%
!!! CATTTTGAAACAAATTTTAT+TGG - chr3_4:14740829-14740848 None:intergenic 15.0%
!! TATTAGAGAGAAAAATATTT+AGG + chr3_4:14741356-14741375 Msa0491780:intron 15.0%
!! ATTAGAGAGAAAAATATTTA+GGG + chr3_4:14741357-14741376 Msa0491780:intron 15.0%
!!! TTGTCTTTTTTTATAAAGTA+AGG + chr3_4:14741754-14741773 Msa0491780:intron 15.0%
!!! TGTCTTTTTTTATAAAGTAA+GGG + chr3_4:14741755-14741774 Msa0491780:intron 15.0%
!! AAATAGAATGAAATAATCAT+TGG - chr3_4:14741803-14741822 None:intergenic 15.0%
!! ATATACATATTGTTATCAAA+GGG - chr3_4:14742219-14742238 None:intergenic 15.0%
!! AATATACATATTGTTATCAA+AGG - chr3_4:14742220-14742239 None:intergenic 15.0%
!!! TATGTGTTTTTTTATGATTT+TGG - chr3_4:14742431-14742450 None:intergenic 15.0%
!! CTAAATTGATTAATCTTAAA+AGG + chr3_4:14742823-14742842 Msa0491780:intron 15.0%
!! TTATTAATCTCTTACTATAT+GGG - chr3_4:14742850-14742869 None:intergenic 15.0%
!! ATTATTAATCTCTTACTATA+TGG - chr3_4:14742851-14742870 None:intergenic 15.0%
!!! TTTTTTTTAAGAAGTCAAAA+TGG - chr3_4:14743211-14743230 None:intergenic 15.0%
!!! TTTGACTTCTTAAAAAAAAA+AGG + chr3_4:14743212-14743231 Msa0491780:intron 15.0%
!!! CTTTTATAAATAAGATCAGA+GGG - chr3_4:14733505-14733524 None:intergenic 20.0%
!!! TCTTTTATAAATAAGATCAG+AGG - chr3_4:14733506-14733525 None:intergenic 20.0%
!! GAAAATAAGATTATCAACTT+TGG - chr3_4:14734224-14734243 None:intergenic 20.0%
!! AATTAAAAAAGCAAGCAATT+TGG - chr3_4:14734320-14734339 None:intergenic 20.0%
!!! GTTTTATAATTTGCCAAATA+TGG - chr3_4:14735457-14735476 None:intergenic 20.0%
!! AAGATTGTATTCCATATAAA+AGG - chr3_4:14734581-14734600 None:intergenic 20.0%
!!! GTTTATAACTTTTTAGCAAA+TGG + chr3_4:14735088-14735107 Msa0491780:intron 20.0%
!! TAATGAAAAGGTTTATGAAA+AGG - chr3_4:14735320-14735339 None:intergenic 20.0%
!! ATGATTGTATTCCATATAAA+AGG + chr3_4:14735405-14735424 Msa0491780:intron 20.0%
!!! TCATAGAATTTTGTCTAATT+TGG - chr3_4:14735602-14735621 None:intergenic 20.0%
!!! ATTCTATGAAAGTACAAAAA+AGG + chr3_4:14735613-14735632 Msa0491780:intron 20.0%
!! AAGTTAATGTCTCAAAAATT+CGG - chr3_4:14735650-14735669 None:intergenic 20.0%
!! AGCATTTAAATTTCAATCAA+CGG + chr3_4:14736082-14736101 Msa0491780:intron 20.0%
!!! GAATTTCTAAGAAAATATAG+AGG - chr3_4:14736371-14736390 None:intergenic 20.0%
!! ATTAACAACTTCAAATATGT+TGG + chr3_4:14736511-14736530 Msa0491780:intron 20.0%
!!! CATTAGTCTAATATCATAAT+TGG + chr3_4:14736871-14736890 Msa0491780:intron 20.0%
!!! CTTTTTTTTTTTTGGTACAA+AGG - chr3_4:14737101-14737120 None:intergenic 20.0%
!!! ATGTTATGAAATAGATTTTC+AGG - chr3_4:14737309-14737328 None:intergenic 20.0%
!!! AATAGTCATTTTAAGCAATT+AGG + chr3_4:14737445-14737464 Msa0491780:intron 20.0%
!!! ATAGTCATTTTAAGCAATTA+GGG + chr3_4:14737446-14737465 Msa0491780:intron 20.0%
!! AAGAAAAGAAAAGGTAAAAA+AGG - chr3_4:14737590-14737609 None:intergenic 20.0%
!! TTAAAATAAGTTAGAACTGA+AGG + chr3_4:14737770-14737789 Msa0491780:intron 20.0%
!! ACAAAGAAGAAATAAGAAAA+TGG + chr3_4:14737949-14737968 Msa0491780:intron 20.0%
!! AAGAAGATAGTAAATTGTTA+TGG + chr3_4:14738085-14738104 Msa0491780:intron 20.0%
!! AAAGAAACCAATAAATGAAA+TGG + chr3_4:14738257-14738276 Msa0491780:intron 20.0%
!! AAAAAGATAATACCACAATT+AGG + chr3_4:14738359-14738378 Msa0491780:intron 20.0%
!! AAAAGATAATACCACAATTA+GGG + chr3_4:14738360-14738379 Msa0491780:intron 20.0%
!! AAAAATTAGGGTAAAAAGTA+GGG + chr3_4:14738408-14738427 Msa0491780:intron 20.0%
!!! GTAATTTTTCATTTTTTTCC+TGG - chr3_4:14738754-14738773 None:intergenic 20.0%
!! TTCAAGATAATGATCTATTT+GGG - chr3_4:14738940-14738959 None:intergenic 20.0%
!!! TCTTTTCATGAACTATTAAT+TGG - chr3_4:14738978-14738997 None:intergenic 20.0%
!! AATGTTTAGGAATGATTTAA+GGG - chr3_4:14739119-14739138 None:intergenic 20.0%
!! AAATGTTTAGGAATGATTTA+AGG - chr3_4:14739120-14739139 None:intergenic 20.0%
!!! TTATTTTATGCCTATTATCA+TGG - chr3_4:14739683-14739702 None:intergenic 20.0%
!! AAAAAAAATGTGTTAAGGTA+AGG - chr3_4:14739800-14739819 None:intergenic 20.0%
!! AACAATGCATTATTATATTC+AGG + chr3_4:14739957-14739976 Msa0491780:intron 20.0%
!! ACAATGCATTATTATATTCA+GGG + chr3_4:14739958-14739977 Msa0491780:intron 20.0%
!!! TGTTTTTTCCCTATAATATA+TGG - chr3_4:14740208-14740227 None:intergenic 20.0%
!!! TGTTTTTTCCCTATAATATA+TGG - chr3_4:14740208-14740227 None:intergenic 20.0%
!!! GATTTTTTTATCATTTGCTT+TGG - chr3_4:14740534-14740553 None:intergenic 20.0%
!! TACGGTTAAAGATTATTTAT+TGG - chr3_4:14740962-14740981 None:intergenic 20.0%
!! AAAAAATCTACAGAAACAAT+AGG + chr3_4:14741242-14741261 Msa0491780:intron 20.0%
!!! TTTGCTTTGAAAAATATTCA+CGG + chr3_4:14741542-14741561 Msa0491780:intron 20.0%
!! ACAAATATGTAGATTATAGT+TGG + chr3_4:14741885-14741904 Msa0491780:intron 20.0%
!!! TTTGTTTTTCCATATTTCTT+CGG + chr3_4:14741934-14741953 Msa0491780:intron 20.0%
!! TTGAACTATTTATCCTTAAT+TGG - chr3_4:14742537-14742556 None:intergenic 20.0%
!!! TAACTGACTTTTTAGTAATT+TGG - chr3_4:14742628-14742647 None:intergenic 20.0%
!!! TTTTTGGACTTAAATTTCAA+AGG + chr3_4:14742899-14742918 Msa0491780:intron 20.0%
!!! CGGTTTTATAAAAGACATTT+GGG - chr3_4:14733596-14733615 None:intergenic 25.0%
!!! TCGGTTTTATAAAAGACATT+TGG - chr3_4:14733597-14733616 None:intergenic 25.0%
! GAGATATTTGTGTTCATAAA+AGG + chr3_4:14733629-14733648 Msa0491780:intron 25.0%
!!! AAAGGTGTTGTGATTATTTT+TGG + chr3_4:14733647-14733666 Msa0491780:intron 25.0%
! TAATCAGAATTCTTACAACA+AGG + chr3_4:14733799-14733818 Msa0491780:CDS 25.0%
! AGTTAGAGATTTCTCTTATT+TGG + chr3_4:14734035-14734054 Msa0491780:intron 25.0%
!! TTTCTGTTTTCTCTTCAAAA+GGG + chr3_4:14734107-14734126 Msa0491780:intron 25.0%
! AAAAAAGTCTAACATGCTAT+TGG + chr3_4:14734151-14734170 Msa0491780:intron 25.0%
! CAATATGGTAAAACATACAT+GGG - chr3_4:14734251-14734270 None:intergenic 25.0%
!! CATGTATGTTTTACCATATT+GGG + chr3_4:14734250-14734269 Msa0491780:intron 25.0%
!! ATGTATGTTTTACCATATTG+GGG + chr3_4:14734251-14734270 Msa0491780:intron 25.0%
!! AATTCTATGAAAGTACGAAA+GGG - chr3_4:14734410-14734429 None:intergenic 25.0%
!! AAATTCTATGAAAGTACGAA+AGG - chr3_4:14734411-14734430 None:intergenic 25.0%
! AACAAAACTGACAAAACTAA+AGG + chr3_4:14734475-14734494 Msa0491780:intron 25.0%
!! TTTAGCAACAACCTTTTATA+TGG + chr3_4:14734567-14734586 Msa0491780:intron 25.0%
!! TTTAGCAACAACCTTTTATA+TGG - chr3_4:14734567-14734586 None:intergenic 25.0%
! TTGCTAAATCTGAGAAAAAA+TGG + chr3_4:14735431-14735450 Msa0491780:intron 25.0%
! TAAATCTGAGAAAAAATGGA+GGG + chr3_4:14735435-14735454 Msa0491780:intron 25.0%
! TGGTTCTTTAACCATATATT+TGG - chr3_4:14735473-14735492 None:intergenic 25.0%
!!! TTATTTTTGTGACGTCTATT+TGG - chr3_4:14736257-14736276 None:intergenic 25.0%
!! TCATTTGCTACTAATATTCA+TGG + chr3_4:14736580-14736599 Msa0491780:intron 25.0%
! GTTAACATATTTGTCTATGT+TGG + chr3_4:14736604-14736623 Msa0491780:intron 25.0%
! ATCGAATTAAAATTACACGT+TGG + chr3_4:14736710-14736729 Msa0491780:intron 25.0%
! ATGTTGAAACACTATTTGAA+AGG - chr3_4:14736765-14736784 None:intergenic 25.0%
! TAAAACCGTCACTAATTAAT+CGG - chr3_4:14736835-14736854 None:intergenic 25.0%
! AATGAATGCAGTATAATGAA+AGG + chr3_4:14736899-14736918 Msa0491780:intron 25.0%
!! CATATACTATTGACTATCAA+TGG + chr3_4:14736931-14736950 Msa0491780:intron 25.0%
!!! GAAAGAAAAAAAGCTCTAAA+TGG - chr3_4:14737058-14737077 None:intergenic 25.0%
!!! TAGAGCTTTTTTTCTTTCTT+TGG + chr3_4:14737060-14737079 Msa0491780:intron 25.0%
! CTAAGTAGCAATTGTTAAAT+TGG + chr3_4:14737183-14737202 Msa0491780:intron 25.0%
!! AAGAATATAAAGTGGTTCTA+AGG + chr3_4:14737263-14737282 Msa0491780:intron 25.0%
!!! TGGTTCTAAGGAATATAAAA+AGG + chr3_4:14737275-14737294 Msa0491780:intron 25.0%
! ATGTACTAAAGCCTATATTA+TGG + chr3_4:14737332-14737351 Msa0491780:intron 25.0%
!!! TTAGTCTTGAAGAAAAGAAA+AGG - chr3_4:14737599-14737618 None:intergenic 25.0%
! GCTATCTTTAAATTTCTTCT+TGG + chr3_4:14738032-14738051 Msa0491780:intron 25.0%
! GAGGGATATAATAAGTATAA+TGG + chr3_4:14738149-14738168 Msa0491780:intron 25.0%
!!! TAATGGATTGTTACTAATTG+AGG + chr3_4:14738166-14738185 Msa0491780:intron 25.0%
!!! AATGGATTGTTACTAATTGA+GGG + chr3_4:14738167-14738186 Msa0491780:intron 25.0%
! ACTAATTGAGGGAAAATAAA+AGG + chr3_4:14738178-14738197 Msa0491780:intron 25.0%
! CTAATTGAGGGAAAATAAAA+GGG + chr3_4:14738179-14738198 Msa0491780:intron 25.0%
! ACCAATAAATGAAATGGAAT+AGG + chr3_4:14738263-14738282 Msa0491780:intron 25.0%
! TCCTATTCCATTTCATTTAT+TGG - chr3_4:14738267-14738286 None:intergenic 25.0%
! TGATTAAGGAGGAAAAATTA+GGG + chr3_4:14738396-14738415 Msa0491780:intron 25.0%
! GAAAAATTAGGGTAAAAAGT+AGG + chr3_4:14738407-14738426 Msa0491780:intron 25.0%
! AAAATGATATATTTGGAAGC+AGG - chr3_4:14738604-14738623 None:intergenic 25.0%
! TAGTTATTGTAACAGACTTT+GGG - chr3_4:14738708-14738727 None:intergenic 25.0%
!!! TTTCATTTTTTTCCTGGTAA+AGG - chr3_4:14738748-14738767 None:intergenic 25.0%
! GTTCAAGATAATGATCTATT+TGG - chr3_4:14738941-14738960 None:intergenic 25.0%
! GATAGATTCCTTAAACAATA+TGG - chr3_4:14739179-14739198 None:intergenic 25.0%
! AGGAATCTATCTACATATTT+AGG + chr3_4:14739188-14739207 Msa0491780:intron 25.0%
! AGGTTAATAATGAGAAAGAA+TGG + chr3_4:14739267-14739286 Msa0491780:intron 25.0%
! TTAGAAAATAGAGAAACTGA+GGG - chr3_4:14739396-14739415 None:intergenic 25.0%
! AGTGATGAATGAATAAAATG+AGG + chr3_4:14739431-14739450 Msa0491780:intron 25.0%
! AATAAAATGAGGAAGATAAC+CGG + chr3_4:14739442-14739461 Msa0491780:intron 25.0%
! ATTTCACTACTAATAACAAC+CGG - chr3_4:14739464-14739483 None:intergenic 25.0%
! CAATGCATTATTATATTCAG+GGG + chr3_4:14739959-14739978 Msa0491780:intron 25.0%
! CCTTATAAAGATGAATAACT+GGG - chr3_4:14740006-14740025 None:intergenic 25.0%
! ACCTTATAAAGATGAATAAC+TGG - chr3_4:14740007-14740026 None:intergenic 25.0%
! ATTTGATTATTACACCATGT+TGG - chr3_4:14740231-14740250 None:intergenic 25.0%
! AATTAAAAAAGCAAGCAATC+TGG + chr3_4:14740370-14740389 Msa0491780:intron 25.0%
! TTTCAAAAACAATGGCATAT+GGG - chr3_4:14740399-14740418 None:intergenic 25.0%
!! TTTTCAAAAACAATGGCATA+TGG - chr3_4:14740400-14740419 None:intergenic 25.0%
!! TTTCTTTTTGCAAGTTTGTA+TGG - chr3_4:14740556-14740575 None:intergenic 25.0%
!!! TAGTTTTAGGTTTTGAATTG+TGG + chr3_4:14740694-14740713 Msa0491780:intron 25.0%
! TCAAAAATTAATGCAGTTCA+TGG + chr3_4:14741126-14741145 Msa0491780:intron 25.0%
! GGTTCCTAACAAATTATTTA+CGG + chr3_4:14741147-14741166 Msa0491780:intron 25.0%
!! AAACCTAATTTGTAAATGAG+CGG + chr3_4:14741632-14741651 Msa0491780:intron 25.0%
! AAATTGTATGAGAGAAAAGT+TGG - chr3_4:14741717-14741736 None:intergenic 25.0%
! TGAACATTGTTATATGTAGA+AGG - chr3_4:14742108-14742127 None:intergenic 25.0%
!! GGAAGAATCTAAAATTACAT+GGG - chr3_4:14742459-14742478 None:intergenic 25.0%
!! TGGAAGAATCTAAAATTACA+TGG - chr3_4:14742460-14742479 None:intergenic 25.0%
! TGAAATATGTCTTCCAATTA+AGG + chr3_4:14742521-14742540 Msa0491780:intron 25.0%
! AAAATTATCTCAATCAGACT+TGG - chr3_4:14742573-14742592 None:intergenic 25.0%
!!! CTTTTTAGTAATTTGGAGTT+TGG - chr3_4:14742621-14742640 None:intergenic 25.0%
!! CCTTTTCATAGTACTTATTA+TGG - chr3_4:14742763-14742782 None:intergenic 25.0%
! CCATAATAAGTACTATGAAA+AGG + chr3_4:14742760-14742779 Msa0491780:CDS 25.0%
!!! TTTTTTATGTATGTTGGAAG+AGG + chr3_4:14743083-14743102 Msa0491780:intron 25.0%
!! TTTTTATGTATGTTGGAAGA+GGG + chr3_4:14743084-14743103 Msa0491780:intron 25.0%
! ACTTTGTGTCTATTATATGT+AGG + chr3_4:14743263-14743282 Msa0491780:intron 25.0%
CATAAACTATCATGTGATTG+TGG + chr3_4:14733341-14733360 Msa0491780:CDS 30.0%
CTCAAATTGAAAAGTTCATC+AGG - chr3_4:14733387-14733406 None:intergenic 30.0%
! GATGTCTCTAGTTCAAATAT+TGG + chr3_4:14733546-14733565 Msa0491780:intron 30.0%
!!! ATTATTTTTGGAGCAGCTTT+TGG + chr3_4:14733659-14733678 Msa0491780:intron 30.0%
TAGCAACTTTCAATTGCTAT+AGG + chr3_4:14733838-14733857 Msa0491780:CDS 30.0%
GTTGAAAAGATAGAACTAAC+TGG + chr3_4:14733939-14733958 Msa0491780:intron 30.0%
! ATTTCTCTTATTTGGCAAGA+AGG + chr3_4:14734043-14734062 Msa0491780:intron 30.0%
! TTTCTCTTATTTGGCAAGAA+GGG + chr3_4:14734044-14734063 Msa0491780:intron 30.0%
AAAGAGAGAAGAGTAAAAGA+TGG + chr3_4:14734074-14734093 Msa0491780:intron 30.0%
AAGAGAGAAGAGTAAAAGAT+GGG + chr3_4:14734075-14734094 Msa0491780:intron 30.0%
! AAGAGAAAACAGAAAGGTAT+GGG - chr3_4:14734102-14734121 None:intergenic 30.0%
!! CTTTTGAAGAGAAAACAGAA+AGG - chr3_4:14734108-14734127 None:intergenic 30.0%
! CTTTCTGTTTTCTCTTCAAA+AGG + chr3_4:14734106-14734125 Msa0491780:intron 30.0%
CCAATATGGTAAAACATACA+TGG - chr3_4:14734252-14734271 None:intergenic 30.0%
! CCATGTATGTTTTACCATAT+TGG + chr3_4:14734249-14734268 Msa0491780:intron 30.0%
! TGTATGTTTTACCATATTGG+GGG + chr3_4:14734252-14734271 Msa0491780:intron 30.0%
! ATTCTATGAAAGTACGAAAG+GGG - chr3_4:14734409-14734428 None:intergenic 30.0%
! TCATAGAATTTTGCCTAACT+TGG + chr3_4:14734420-14734439 Msa0491780:intron 30.0%
ATATGGTTAAGTACCATTGT+GGG - chr3_4:14734513-14734532 None:intergenic 30.0%
AATATGGTTAAGTACCATTG+TGG - chr3_4:14734514-14734533 None:intergenic 30.0%
CAATGGTACTTAACCATATT+TGG + chr3_4:14734514-14734533 Msa0491780:intron 30.0%
TGTTGCTAAATCTAGGAAAA+CGG - chr3_4:14734557-14734576 None:intergenic 30.0%
AAAAGGTTGTTGCTAAATCT+AGG - chr3_4:14735422-14735441 None:intergenic 30.0%
ACATATACATAACCTATGAG+CGG + chr3_4:14734903-14734922 Msa0491780:intron 30.0%
! AACAACTCTGTCAATTTTGT+TGG - chr3_4:14734961-14734980 None:intergenic 30.0%
AACAAAATTGACAGAGTTGT+TGG + chr3_4:14734960-14734979 Msa0491780:intron 30.0%
!!! TTTTTAGCAAATGGCTTTGA+TGG + chr3_4:14735097-14735116 Msa0491780:intron 30.0%
CTAAATCTGAGAAAAAATGG+AGG + chr3_4:14735434-14735453 Msa0491780:intron 30.0%
ATATGGTTAAAGAACCATTG+TGG + chr3_4:14735476-14735495 Msa0491780:intron 30.0%
!! ACATTAACTTGTGTAGTTCT+TGG + chr3_4:14735660-14735679 Msa0491780:intron 30.0%
ATTCCTAAGAACATAGTCAT+TGG + chr3_4:14735821-14735840 Msa0491780:intron 30.0%
!! ATACTATGTGAACTTGCTTT+TGG - chr3_4:14735951-14735970 None:intergenic 30.0%
TTTAAATGCTGCTATTGTCA+AGG - chr3_4:14736072-14736091 None:intergenic 30.0%
! ACTTACTTGTGAAGGTATAA+AGG - chr3_4:14736122-14736141 None:intergenic 30.0%
AAGTAAACACTTACTTGTGA+AGG - chr3_4:14736130-14736149 None:intergenic 30.0%
ATTCTCAATTACTAGACGTA+CGG + chr3_4:14736418-14736437 Msa0491780:intron 30.0%
!!! GTAGCAAATGAAGAGTTTTT+TGG - chr3_4:14736571-14736590 None:intergenic 30.0%
TCTATGTTGGAAAATGTTTG+TGG + chr3_4:14736617-14736636 Msa0491780:intron 30.0%
AAAACCGTCACTAATTAATC+GGG - chr3_4:14736834-14736853 None:intergenic 30.0%
! ATACTATTGACTATCAATGG+TGG + chr3_4:14736934-14736953 Msa0491780:intron 30.0%
GAATGACAACTATTTAGAAG+CGG + chr3_4:14736989-14737008 Msa0491780:intron 30.0%
!! AAAGCTCTAAATGGCAAAAT+AGG - chr3_4:14737049-14737068 None:intergenic 30.0%
AGTAGCAATTGTTAAATTGG+AGG + chr3_4:14737186-14737205 Msa0491780:intron 30.0%
GTAGCAATTGTTAAATTGGA+GGG + chr3_4:14737187-14737206 Msa0491780:intron 30.0%
CATCCACTAAGAATATAAAG+TGG + chr3_4:14737255-14737274 Msa0491780:intron 30.0%
GAACCACTTTATATTCTTAG+TGG - chr3_4:14737261-14737280 None:intergenic 30.0%
TGTCTTTAGTGCCATAATAT+AGG - chr3_4:14737346-14737365 None:intergenic 30.0%
!!! TGTAGTTTTGATAAGTTGAC+TGG - chr3_4:14737537-14737556 None:intergenic 30.0%
TATCAAAACTACAACTGCAT+TGG + chr3_4:14737544-14737563 Msa0491780:intron 30.0%
CTATGTGAAACATAAACATG+TGG - chr3_4:14737629-14737648 None:intergenic 30.0%
TATGTTTCATGTACTCTCTA+TGG - chr3_4:14737652-14737671 None:intergenic 30.0%
AGCTGAATGAGCTATATTAA+AGG - chr3_4:14737697-14737716 None:intergenic 30.0%
ATCAGTAATTTGAAGAGGAA+TGG - chr3_4:14737721-14737740 None:intergenic 30.0%
TTTCGATCAGTAATTTGAAG+AGG - chr3_4:14737726-14737745 None:intergenic 30.0%
AAGGCTGAATTTCTAAATGA+GGG + chr3_4:14737880-14737899 Msa0491780:intron 30.0%
GTTATGGAAAGCAAAATTGA+TGG + chr3_4:14738101-14738120 Msa0491780:intron 30.0%
AAAACGTAAGAAGAAATGAG+AGG + chr3_4:14738130-14738149 Msa0491780:intron 30.0%
AAACGTAAGAAGAAATGAGA+GGG + chr3_4:14738131-14738150 Msa0491780:intron 30.0%
AGGGAAAATAAAAGGGTTAA+TGG + chr3_4:14738186-14738205 Msa0491780:intron 30.0%
GAAAATAAAAGGGTTAATGG+TGG + chr3_4:14738189-14738208 Msa0491780:intron 30.0%
GTGATTAAGGAGGAAAAATT+AGG + chr3_4:14738395-14738414 Msa0491780:intron 30.0%
! TAAAAAGTAGGGTTTAGGTT+AGG + chr3_4:14738419-14738438 Msa0491780:intron 30.0%
CTAGTTATTGTAACAGACTT+TGG - chr3_4:14738709-14738728 None:intergenic 30.0%
!! TTGCGTTTGTTTTTCATGAT+TGG - chr3_4:14738809-14738828 None:intergenic 30.0%
TCATGAAAAACAAACGCAAT+TGG + chr3_4:14738810-14738829 Msa0491780:intron 30.0%
! TGAAGCTGAATTCCTTTTTA+TGG - chr3_4:14738854-14738873 None:intergenic 30.0%
TAACTGTATCTTCCAAAATG+CGG - chr3_4:14738907-14738926 None:intergenic 30.0%
AAGATAATGATCTATTTGGG+AGG - chr3_4:14738937-14738956 None:intergenic 30.0%
!! GTGAATCTTGAAAGTTTTAG+AGG - chr3_4:14739012-14739031 None:intergenic 30.0%
CTTAGAAAATAGAGAAACTG+AGG - chr3_4:14739397-14739416 None:intergenic 30.0%
TTTCCGTTTACCATGATAAT+AGG + chr3_4:14739670-14739689 Msa0491780:intron 30.0%
ATGCCTATTATCATGGTAAA+CGG - chr3_4:14739676-14739695 None:intergenic 30.0%
TAGCATGACAAATTGTGTTA+AGG - chr3_4:14739832-14739851 None:intergenic 30.0%
CCCAGTTATTCATCTTTATA+AGG + chr3_4:14740003-14740022 Msa0491780:intron 30.0%
!!! GGCAAATCGTTTTTTTTATC+AGG - chr3_4:14740050-14740069 None:intergenic 30.0%
TTCAAAAACAATGGCATATG+GGG - chr3_4:14740398-14740417 None:intergenic 30.0%
AAAGACCGAAATTGAATTTC+CGG - chr3_4:14740506-14740525 None:intergenic 30.0%
AAAAACATGAGACATGAACT+TGG + chr3_4:14740578-14740597 Msa0491780:intron 30.0%
TATCAATTGAGCTGTTTGTT+TGG + chr3_4:14740753-14740772 Msa0491780:intron 30.0%
ATCAATTGAGCTGTTTGTTT+GGG + chr3_4:14740754-14740773 Msa0491780:intron 30.0%
AATCTTTAACCGTAAGATCA+TGG + chr3_4:14740968-14740987 Msa0491780:intron 30.0%
ATCTTTAACCGTAAGATCAT+GGG + chr3_4:14740969-14740988 Msa0491780:intron 30.0%
!! GCTACCGTAAATAATTTGTT+AGG - chr3_4:14741154-14741173 None:intergenic 30.0%
! CCCTAATTTTCATTCAAACT+CGG - chr3_4:14741176-14741195 None:intergenic 30.0%
CCGAGTTTGAATGAAAATTA+GGG + chr3_4:14741173-14741192 Msa0491780:intron 30.0%
! AACCTAATTTGTAAATGAGC+GGG + chr3_4:14741633-14741652 Msa0491780:intron 30.0%
TAAATGAGCGGGAAAAAATT+AGG + chr3_4:14741644-14741663 Msa0491780:intron 30.0%
! TTCACAATGAATGTCGTTTA+AGG - chr3_4:14741848-14741867 None:intergenic 30.0%
AACGACATTCATTGTGAAAA+CGG + chr3_4:14741850-14741869 Msa0491780:intron 30.0%
! TTTTTCCGAAAGTAATCTAG+TGG + chr3_4:14742030-14742049 Msa0491780:intron 30.0%
CCACATTTATTCACCTTAAA+CGG - chr3_4:14742068-14742087 None:intergenic 30.0%
ATGAATGAGCATAACTTAGT+TGG - chr3_4:14742133-14742152 None:intergenic 30.0%
TAATCTCACAACTTGGTTAA+TGG - chr3_4:14742174-14742193 None:intergenic 30.0%
AGTCCAAAAAAATGACATAG+AGG + chr3_4:14742497-14742516 Msa0491780:intron 30.0%
!!! CAACCTCTATGTCATTTTTT+TGG - chr3_4:14742503-14742522 None:intergenic 30.0%
TTGGACTTAAATTTCAAAGG+TGG + chr3_4:14742902-14742921 Msa0491780:intron 30.0%
ACTTAAATTTCAAAGGTGGT+TGG + chr3_4:14742906-14742925 Msa0491780:intron 30.0%
TTTACAAGATTGTGTTGTGT+TGG + chr3_4:14742958-14742977 Msa0491780:intron 30.0%
!!! GTAATCTCCTGAAGTTTTTT+TGG - chr3_4:14743430-14743449 None:intergenic 30.0%
AAATTTCTCCTTACTCTGAT+GGG + chr3_4:14743453-14743472 Msa0491780:CDS 30.0%
CAATCGATATAAACGTTCCT+TGG + chr3_4:14733419-14733438 Msa0491780:CDS 35.0%
TTGGTGAGTTCATTTAGGTA+TGG + chr3_4:14733687-14733706 Msa0491780:CDS 35.0%
TGAGTTCATTTAGGTATGGT+GGG + chr3_4:14733691-14733710 Msa0491780:CDS 35.0%
GAAGAGAAAACAGAAAGGTA+TGG - chr3_4:14734103-14734122 None:intergenic 35.0%
TTCAAAAGGGAGAAGAAAGA+TGG + chr3_4:14734120-14734139 Msa0491780:intron 35.0%
ATGGTAAAACATACATGGGA+GGG - chr3_4:14734247-14734266 None:intergenic 35.0%
TATGGTAAAACATACATGGG+AGG - chr3_4:14734248-14734267 None:intergenic 35.0%
! GTATGTTTTACCATATTGGG+GGG + chr3_4:14734253-14734272 Msa0491780:intron 35.0%
! TATGTTTTACCATATTGGGG+GGG + chr3_4:14734254-14734273 Msa0491780:intron 35.0%
TTCAAAACACCAACATTCGT+GGG - chr3_4:14735566-14735585 None:intergenic 35.0%
GTTGCTAAATCTAGGAAAAC+GGG - chr3_4:14734556-14734575 None:intergenic 35.0%
!!! CATGTCGCTTCATTTTGATT+AGG + chr3_4:14734788-14734807 Msa0491780:intron 35.0%
AGAATGAGAAATTATCCCCT+TGG - chr3_4:14734938-14734957 None:intergenic 35.0%
CACATATACATAACCATGAG+CGG - chr3_4:14735018-14735037 None:intergenic 35.0%
!!! CATGTCGCTTCATTTTGATT+AGG - chr3_4:14734788-14734807 None:intergenic 35.0%
GGTGGTATCAGTTTATGAAA+AGG - chr3_4:14735186-14735205 None:intergenic 35.0%
TTCAAAACACCAACATTCGT+GGG + chr3_4:14735566-14735585 Msa0491780:intron 35.0%
!! TTAACTTGTGTAGTTCTTGG+CGG + chr3_4:14735663-14735682 Msa0491780:intron 35.0%
!!! GTGTTTTTGGTAGTGATGAA+AGG - chr3_4:14735847-14735866 None:intergenic 35.0%
TTCAAAGTTAAGACCAGCTA+GGG - chr3_4:14735871-14735890 None:intergenic 35.0%
GTTCACATAGTATGTAAGCA+TGG + chr3_4:14735958-14735977 Msa0491780:intron 35.0%
! TTGTGAAGGTATAAAGGTAG+TGG - chr3_4:14736116-14736135 None:intergenic 35.0%
TTCTCAATTACTAGACGTAC+GGG + chr3_4:14736419-14736438 Msa0491780:intron 35.0%
AACATTGCATTGTGCGTTTA+AGG + chr3_4:14736780-14736799 Msa0491780:intron 35.0%
AATGAAACTTCAAGCCTTCA+AGG + chr3_4:14736805-14736824 Msa0491780:intron 35.0%
AATTAATCGGGTTACCTTGA+AGG - chr3_4:14736822-14736841 None:intergenic 35.0%
GTAACCCGATTAATTAGTGA+CGG + chr3_4:14736827-14736846 Msa0491780:intron 35.0%
! TGAGTACTTTTGTGAGTAGT+TGG - chr3_4:14737026-14737045 None:intergenic 35.0%
GAATCAATTCTGCTCTTTAG+CGG - chr3_4:14737236-14737255 None:intergenic 35.0%
ATATGCTAGATTAGAGTGAG+AGG + chr3_4:14737389-14737408 Msa0491780:intron 35.0%
TATGCTAGATTAGAGTGAGA+GGG + chr3_4:14737390-14737409 Msa0491780:intron 35.0%
!! CATTGGTGGTGTCAATATTT+AGG + chr3_4:14737561-14737580 Msa0491780:intron 35.0%
ATCAATTGAGAGAGAGAGAA+AGG + chr3_4:14737854-14737873 Msa0491780:intron 35.0%
TCAATTGAGAGAGAGAGAAA+GGG + chr3_4:14737855-14737874 Msa0491780:intron 35.0%
GAAGGCTGAATTTCTAAATG+AGG + chr3_4:14737879-14737898 Msa0491780:intron 35.0%
TTTCCTCCTTAATCACATAG+TGG - chr3_4:14738391-14738410 None:intergenic 35.0%
TAGGGTAAAAAGTAGGGTTT+AGG + chr3_4:14738414-14738433 Msa0491780:intron 35.0%
! TTTAGGTTAGGAGACTTAGT+AGG + chr3_4:14738431-14738450 Msa0491780:intron 35.0%
ATTTGGAAGCAGGCATAAAT+CGG - chr3_4:14738594-14738613 None:intergenic 35.0%
!! CGTTTGTTTTTCATGATTGG+TGG - chr3_4:14738806-14738825 None:intergenic 35.0%
ATTGGTACAAAATTCGACGA+TGG + chr3_4:14738828-14738847 Msa0491780:intron 35.0%
! ACCTTTTCGACAATATTGTG+AGG + chr3_4:14738873-14738892 Msa0491780:intron 35.0%
TCCTCACAATATTGTCGAAA+AGG - chr3_4:14738877-14738896 None:intergenic 35.0%
GCTTACGTCCATATTGTTTA+AGG + chr3_4:14739168-14739187 Msa0491780:intron 35.0%
ACTTACTGCTTTCTAACAAG+AGG + chr3_4:14739247-14739266 Msa0491780:intron 35.0%
GACTAGCAATTAGACTTCAT+CGG - chr3_4:14739309-14739328 None:intergenic 35.0%
AGTCTAATTGCTAGTCCTTA+AGG + chr3_4:14739313-14739332 Msa0491780:intron 35.0%
!! AGAATAGTGCCACTTGTTTA+GGG - chr3_4:14739503-14739522 None:intergenic 35.0%
!! AAGAATAGTGCCACTTGTTT+AGG - chr3_4:14739504-14739523 None:intergenic 35.0%
AACAAGTGGCACTATTCTTA+AGG + chr3_4:14739505-14739524 Msa0491780:intron 35.0%
GTGAAACTGACCATATAACT+AGG + chr3_4:14739536-14739555 Msa0491780:intron 35.0%
AACTGACCATATAACTAGGA+AGG + chr3_4:14739540-14739559 Msa0491780:intron 35.0%
! TAGAGTATCATAGCATGACT+AGG - chr3_4:14739611-14739630 None:intergenic 35.0%
ACTCTAACTACTAGTACATG+TGG + chr3_4:14739625-14739644 Msa0491780:intron 35.0%
AGTGGACGACAAAATTTATG+TGG - chr3_4:14739777-14739796 None:intergenic 35.0%
AAATGTGTTAAGGTAAGGAG+TGG - chr3_4:14739795-14739814 None:intergenic 35.0%
ATAGGGAAAAAACACCAACA+TGG + chr3_4:14740214-14740233 Msa0491780:intron 35.0%
ATAGGGAAAAAACACCAACA+TGG + chr3_4:14740214-14740233 Msa0491780:intron 35.0%
! GTGTTTGTCTTTTACCATGT+TGG - chr3_4:14740315-14740334 None:intergenic 35.0%
TCAAAAACAATGGCATATGG+GGG - chr3_4:14740397-14740416 None:intergenic 35.0%
TGGATCAAGATCAAGCAATT+CGG - chr3_4:14740444-14740463 None:intergenic 35.0%
! TTCGGTGTATCAATAGTTGT+TGG - chr3_4:14740464-14740483 None:intergenic 35.0%
! TGTCAAGATTTTCACGCATT+CGG - chr3_4:14740482-14740501 None:intergenic 35.0%
GACAACCGGAAATTCAATTT+CGG + chr3_4:14740498-14740517 Msa0491780:intron 35.0%
!! GTTTTGAATTGTGGAACTCT+CGG + chr3_4:14740703-14740722 Msa0491780:intron 35.0%
TGACACTCATTGTAAAACAG+AGG - chr3_4:14740800-14740819 None:intergenic 35.0%
GCCGAGTTTGAATGAAAATT+AGG + chr3_4:14741172-14741191 Msa0491780:intron 35.0%
! CCCTAATTTTCATGCAAACT+CGG - chr3_4:14741386-14741405 None:intergenic 35.0%
CCGAGTTTGCATGAAAATTA+GGG + chr3_4:14741383-14741402 Msa0491780:intron 35.0%
TTCCCGCTCATTTACAAATT+AGG - chr3_4:14741638-14741657 None:intergenic 35.0%
! ACAATGAATGTCGTTTAAGG+CGG - chr3_4:14741845-14741864 None:intergenic 35.0%
ACATTCATTGTGAAAACGGA+GGG + chr3_4:14741854-14741873 Msa0491780:intron 35.0%
TTTCCATATTTCTTCGGTTG+AGG + chr3_4:14741940-14741959 Msa0491780:intron 35.0%
TTACCTCAACCGAAGAAATA+TGG - chr3_4:14741946-14741965 None:intergenic 35.0%
TCTAGCCACTAGATTACTTT+CGG - chr3_4:14742038-14742057 None:intergenic 35.0%
GCTAGAAAATTCACCGTTTA+AGG + chr3_4:14742052-14742071 Msa0491780:intron 35.0%
! CCGTTTAAGGTGAATAAATG+TGG + chr3_4:14742065-14742084 Msa0491780:intron 35.0%
TGTAGAAGGAGTTGAAACTT+CGG - chr3_4:14742094-14742113 None:intergenic 35.0%
! TGGTTAATGGTTTGGATTTC+AGG - chr3_4:14742161-14742180 None:intergenic 35.0%
TCACAACTTGGTTAATGGTT+TGG - chr3_4:14742169-14742188 None:intergenic 35.0%
GAGACTATAATCTCACAACT+TGG - chr3_4:14742181-14742200 None:intergenic 35.0%
! GCTAGTCATATTTTACCACT+TGG + chr3_4:14742279-14742298 Msa0491780:intron 35.0%
!! TATCAAAGTGTCGAGTCTAA+CGG - chr3_4:14742330-14742349 None:intergenic 35.0%
ACTTCACGTCGATCAAAAAT+TGG - chr3_4:14742480-14742499 None:intergenic 35.0%
AAAGCTATCAGATCCTTCAT+CGG - chr3_4:14742702-14742721 None:intergenic 35.0%
!!! GTTCTTGACGTTGCTATTTT+GGG + chr3_4:14742980-14742999 Msa0491780:intron 35.0%
!!! TTCTTGACGTTGCTATTTTG+GGG + chr3_4:14742981-14743000 Msa0491780:intron 35.0%
CGTTAAGTAGCAACATACAA+AGG - chr3_4:14743132-14743151 None:intergenic 35.0%
GAAATTTCTCCTTACTCTGA+TGG + chr3_4:14743452-14743471 Msa0491780:CDS 35.0%
AATTTCTCCTTACTCTGATG+GGG + chr3_4:14743454-14743473 Msa0491780:CDS 35.0%
TCGATATAAACGTTCCTTGG+AGG + chr3_4:14733422-14733441 Msa0491780:CDS 40.0%
!!! ATTTTTGGAGCAGCTTTTGG+TGG + chr3_4:14733662-14733681 Msa0491780:intron 40.0%
!!! TTTTTGGAGCAGCTTTTGGT+GGG + chr3_4:14733663-14733682 Msa0491780:intron 40.0%
GTGAGTTCATTTAGGTATGG+TGG + chr3_4:14733690-14733709 Msa0491780:CDS 40.0%
TGAAGCTGATATGCTTCATG+AGG + chr3_4:14733743-14733762 Msa0491780:CDS 40.0%
AATTGCTATAGGCATGACCA+TGG + chr3_4:14733849-14733868 Msa0491780:CDS 40.0%
TGGTAAAACATACATGGGAG+GGG - chr3_4:14734246-14734265 None:intergenic 40.0%
! ATGTTTTACCATATTGGGGG+GGG + chr3_4:14734255-14734274 Msa0491780:intron 40.0%
ATGGTAAAAGACAGACACGT+GGG - chr3_4:14734373-14734392 None:intergenic 40.0%
TACGAAAGGGGTAAAAACAC+CGG - chr3_4:14734397-14734416 None:intergenic 40.0%
! GGTTTAGGTTTGTCCAAGTT+AGG - chr3_4:14734436-14734455 None:intergenic 40.0%
AAACCTAAACCCACGAATGT+TGG + chr3_4:14734445-14734464 Msa0491780:intron 40.0%
GTTCAAAACACCAACATTCG+TGG - chr3_4:14735565-14735584 None:intergenic 40.0%
CTAAATCTAGGAAAACGGGA+GGG - chr3_4:14734552-14734571 None:intergenic 40.0%
GGCGGTATCAATTTGTGAAA+AGG + chr3_4:14734730-14734749 Msa0491780:intron 40.0%
ATTGACAGAGTTGTTGGAGA+TGG + chr3_4:14734966-14734985 Msa0491780:intron 40.0%
AAGAACCATTGTGGCACAAA+AGG + chr3_4:14735485-14735504 Msa0491780:intron 40.0%
! TTATGCCTTTTGTGCCACAA+TGG - chr3_4:14735493-14735512 None:intergenic 40.0%
GTTCAAAACACCAACATTCG+TGG + chr3_4:14735565-14735584 Msa0491780:intron 40.0%
AGGCCAATGACTATGTTCTT+AGG - chr3_4:14735827-14735846 None:intergenic 40.0%
GTTCAAAGTTAAGACCAGCT+AGG - chr3_4:14735872-14735891 None:intergenic 40.0%
CGCATGTGAGACTATAATTC+AGG + chr3_4:14735891-14735910 Msa0491780:intron 40.0%
!! GAACTTGCTTTTGGATTGCT+TGG - chr3_4:14735942-14735961 None:intergenic 40.0%
CTATTGTCAAGGTAAGGGAA+AGG - chr3_4:14736061-14736080 None:intergenic 40.0%
TGCTGCTATTGTCAAGGTAA+GGG - chr3_4:14736066-14736085 None:intergenic 40.0%
ATGCTGCTATTGTCAAGGTA+AGG - chr3_4:14736067-14736086 None:intergenic 40.0%
TGTCGAGGAAGAATTAGAAG+AGG - chr3_4:14736164-14736183 None:intergenic 40.0%
CTAATTCTTCCTCGACACTT+AGG + chr3_4:14736167-14736186 Msa0491780:intron 40.0%
! TTAACCAAACCTAAGTGTCG+AGG - chr3_4:14736179-14736198 None:intergenic 40.0%
TTAGAGTGAGAGGGCAAAAT+TGG + chr3_4:14737399-14737418 Msa0491780:intron 40.0%
TGAGAGGGCAAAATTGGAAT+AGG + chr3_4:14737405-14737424 Msa0491780:intron 40.0%
GAGAGGGCAAAATTGGAATA+GGG + chr3_4:14737406-14737425 Msa0491780:intron 40.0%
CAAAACTACAACTGCATTGG+TGG + chr3_4:14737547-14737566 Msa0491780:intron 40.0%
TCCTTAATCACATAGTGGTG+GGG - chr3_4:14738386-14738405 None:intergenic 40.0%
CTCCTTAATCACATAGTGGT+GGG - chr3_4:14738387-14738406 None:intergenic 40.0%
! GGGTGAATCACTCTTCTTTT+AGG - chr3_4:14738657-14738676 None:intergenic 40.0%
!! CTGGTAAAGGCATTTGTGTA+AGG - chr3_4:14738735-14738754 None:intergenic 40.0%
CTTACACAAATGCCTTTACC+AGG + chr3_4:14738733-14738752 Msa0491780:intron 40.0%
ACGACACCAATACAAAGAAG+TGG + chr3_4:14738774-14738793 Msa0491780:intron 40.0%
CGACACCAATACAAAGAAGT+GGG + chr3_4:14738775-14738794 Msa0491780:intron 40.0%
AGACACCCACTTCTTTGTAT+TGG - chr3_4:14738783-14738802 None:intergenic 40.0%
ATTCGACGATGGCCATAAAA+AGG + chr3_4:14738839-14738858 Msa0491780:intron 40.0%
! GAGGATCAATTACCGCATTT+TGG + chr3_4:14738892-14738911 Msa0491780:intron 40.0%
AGGACAAAGGATCAACCTTA+AGG - chr3_4:14739331-14739350 None:intergenic 40.0%
AGAGGTAGAAAAGAGGACAA+AGG - chr3_4:14739344-14739363 None:intergenic 40.0%
TCTTGGAAGAGGTAGAAAAG+AGG - chr3_4:14739351-14739370 None:intergenic 40.0%
!! ATTAGAGAGTGTCTTGGAAG+AGG - chr3_4:14739362-14739381 None:intergenic 40.0%
!! GGAAACATTAGAGAGTGTCT+TGG - chr3_4:14739368-14739387 None:intergenic 40.0%
GAAAATAGAGAAACTGAGGG+AGG - chr3_4:14739393-14739412 None:intergenic 40.0%
TGGCACTATTCTTAAGGAGT+GGG + chr3_4:14739511-14739530 Msa0491780:intron 40.0%
GCAACTCCTTCCTAGTTATA+TGG - chr3_4:14739549-14739568 None:intergenic 40.0%
ATCATAGCATGACTAGGCTT+TGG - chr3_4:14739605-14739624 None:intergenic 40.0%
CATGGTAAACGGAAATGACT+TGG - chr3_4:14739665-14739684 None:intergenic 40.0%
TTCTACCAACTGAGCTATCA+CGG - chr3_4:14739939-14739958 None:intergenic 40.0%
GCATTATTATATTCAGGGGC+CGG + chr3_4:14739963-14739982 Msa0491780:intron 40.0%
CATTATTATATTCAGGGGCC+GGG + chr3_4:14739964-14739983 Msa0491780:intron 40.0%
ATTATTATATTCAGGGGCCG+GGG + chr3_4:14739965-14739984 Msa0491780:intron 40.0%
AAGATGAATAACTGGGTGTC+CGG - chr3_4:14739999-14740018 None:intergenic 40.0%
CATGGTAAAAGACAAACACG+TGG + chr3_4:14740316-14740335 Msa0491780:intron 40.0%
AAGACAAACACGTGGAATTG+TGG + chr3_4:14740324-14740343 Msa0491780:intron 40.0%
AGACAAACACGTGGAATTGT+GGG + chr3_4:14740325-14740344 Msa0491780:intron 40.0%
TGGAATTGTGGGAATTGGTA+AGG + chr3_4:14740336-14740355 Msa0491780:intron 40.0%
TGCGTGAAAATCTTGACAAC+CGG + chr3_4:14740484-14740503 Msa0491780:intron 40.0%
CAGCTCAATTGATAAGCTGA+TGG - chr3_4:14740747-14740766 None:intergenic 40.0%
AGTCTAGTTGAGGGTAAAGT+TGG - chr3_4:14740896-14740915 None:intergenic 40.0%
TTGAACGACCCATGATCTTA+CGG - chr3_4:14740980-14740999 None:intergenic 40.0%
GCCGAGTTTGCATGAAAATT+AGG + chr3_4:14741382-14741401 Msa0491780:intron 40.0%
!! AATGTCGTTTAAGGCGGTTT+TGG - chr3_4:14741839-14741858 None:intergenic 40.0%
GACATTCATTGTGAAAACGG+AGG + chr3_4:14741853-14741872 Msa0491780:intron 40.0%
TTGCAGAAATTGTCCGATGA+AGG + chr3_4:14742686-14742705 Msa0491780:intron 40.0%
AGGATCTGATAGCTTTCACA+AGG + chr3_4:14742706-14742725 Msa0491780:CDS 40.0%
ATGGTCATTGATGCAGCTAA+TGG - chr3_4:14742744-14742763 None:intergenic 40.0%
!!! GGTTCTTGACGTTGCTATTT+TGG + chr3_4:14742979-14742998 Msa0491780:intron 40.0%
!!! TCTTGACGTTGCTATTTTGG+GGG + chr3_4:14742982-14743001 Msa0491780:intron 40.0%
!!! GTGGTGGAAGTTGTTTTTTG+TGG + chr3_4:14743029-14743048 Msa0491780:intron 40.0%
TTTGTGGCAGATTGTGATGT+TGG + chr3_4:14743045-14743064 Msa0491780:intron 40.0%
TAGTCTAGCATTTCTTGTGC+TGG + chr3_4:14743157-14743176 Msa0491780:intron 40.0%
!! TAGCATTTCTTGTGCTGGTT+AGG + chr3_4:14743162-14743181 Msa0491780:intron 40.0%
AACAAAGCTTCACGTTCTGC+TGG - chr3_4:14733294-14733313 None:intergenic 45.0%
! AGCAGAACGTGAAGCTTTGT+TGG + chr3_4:14733293-14733312 Msa0491780:CDS 45.0%
ACGAAGATGGCCATTGGTAT+TGG - chr3_4:14733460-14733479 None:intergenic 45.0%
! TATGACTTGCCTGACGAAGA+TGG - chr3_4:14733473-14733492 None:intergenic 45.0%
!!! TTTTGGAGCAGCTTTTGGTG+GGG + chr3_4:14733664-14733683 Msa0491780:intron 45.0%
!! TGGGGTTGGTGAGTTCATTT+AGG + chr3_4:14733682-14733701 Msa0491780:CDS 45.0%
! ATTTAGGTATGGTGGGAGTG+AGG + chr3_4:14733698-14733717 Msa0491780:CDS 45.0%
GAGTGAGGTCAATGCAAGTT+TGG + chr3_4:14733713-14733732 Msa0491780:CDS 45.0%
CCTTAGTGATAGCAATGCCA+TGG - chr3_4:14733869-14733888 None:intergenic 45.0%
CCATGGCATTGCTATCACTA+AGG + chr3_4:14733866-14733885 Msa0491780:CDS 45.0%
! TGTTTTACCATATTGGGGGG+GGG + chr3_4:14734256-14734275 Msa0491780:intron 45.0%
CATGGTAAAAGACAGACACG+TGG - chr3_4:14734374-14734393 None:intergenic 45.0%
! GTGTCTGTCTTTTACCATGC+CGG + chr3_4:14734375-14734394 Msa0491780:intron 45.0%
ACACCAACATTCGTGGGTTT+AGG - chr3_4:14735572-14735591 None:intergenic 45.0%
! GTATGCGTTTTGTCCCACAA+TGG + chr3_4:14734497-14734516 Msa0491780:intron 45.0%
GCTAAATCTAGGAAAACGGG+AGG - chr3_4:14734553-14734572 None:intergenic 45.0%
ACACCAAAGAACACGACTCT+TGG + chr3_4:14734709-14734728 Msa0491780:intron 45.0%
AGATGGAGAGATTATCCCCT+TGG + chr3_4:14734983-14735002 Msa0491780:intron 45.0%
ACACCAAAGAACACGACTCT+TGG - chr3_4:14734709-14734728 None:intergenic 45.0%
!! GAGTCGTGTTCTTTGGTGTT+AGG + chr3_4:14735208-14735227 Msa0491780:intron 45.0%
ACACCAACATTCGTGGGTTT+AGG + chr3_4:14735572-14735591 Msa0491780:intron 45.0%
CAACCTAAACCCACGAATGT+TGG - chr3_4:14735578-14735597 None:intergenic 45.0%
GTGTAGTTCTTGGCGGAAAA+AGG + chr3_4:14735670-14735689 Msa0491780:intron 45.0%
TACCAAAAACACACCCTAGC+TGG + chr3_4:14735855-14735874 Msa0491780:intron 45.0%
!! GGTATAAAGGTAGTGGAGCA+AGG - chr3_4:14736109-14736128 None:intergenic 45.0%
TCTTCCTCGACACTTAGGTT+TGG + chr3_4:14736172-14736191 Msa0491780:intron 45.0%
GGTGGCTAGTAACTAACTGA+TGG + chr3_4:14738207-14738226 Msa0491780:intron 45.0%
CCTCCTTAATCACATAGTGG+TGG - chr3_4:14738388-14738407 None:intergenic 45.0%
CCACCACTATGTGATTAAGG+AGG + chr3_4:14738385-14738404 Msa0491780:intron 45.0%
ATGCTTTAGCACACCTTGTG+CGG - chr3_4:14738679-14738698 None:intergenic 45.0%
ATAGAGAAACTGAGGGAGGA+AGG - chr3_4:14739389-14739408 None:intergenic 45.0%
CCACTTGTTTAGGGAGTTAG+TGG - chr3_4:14739494-14739513 None:intergenic 45.0%
CCACTAACTCCCTAAACAAG+TGG + chr3_4:14739491-14739510 Msa0491780:intron 45.0%
GTGGCACTATTCTTAAGGAG+TGG + chr3_4:14739510-14739529 Msa0491780:intron 45.0%
TCTACCAACTGAGCTATCAC+GGG - chr3_4:14739938-14739957 None:intergenic 45.0%
AGATGAATAACTGGGTGTCC+GGG - chr3_4:14739998-14740017 None:intergenic 45.0%
ACACGTGGAATTGTGGGAAT+TGG + chr3_4:14740331-14740350 Msa0491780:intron 45.0%
CGGGTCAAAAGTCTAGTTGA+GGG - chr3_4:14740905-14740924 None:intergenic 45.0%
ACGGGTCAAAAGTCTAGTTG+AGG - chr3_4:14740906-14740925 None:intergenic 45.0%
ACTCTTACAACGTGACCAAG+TGG - chr3_4:14742297-14742316 None:intergenic 45.0%
! AAGGTGGTTGGTTGTTGTGT+TGG + chr3_4:14742918-14742937 Msa0491780:intron 45.0%
! GCAGATTGTGATGTTGGTTG+AGG + chr3_4:14743051-14743070 Msa0491780:intron 45.0%
! TGTATGTTGGAAGAGGGTGT+TGG + chr3_4:14743090-14743109 Msa0491780:intron 45.0%
!! GTATGTTGGAAGAGGGTGTT+GGG + chr3_4:14743091-14743110 Msa0491780:intron 45.0%
GGACTTGGAGGACATAAGAA+AGG + chr3_4:14743362-14743381 Msa0491780:CDS 45.0%
GCAGTGGCCAAAAAAACTTC+AGG + chr3_4:14743420-14743439 Msa0491780:CDS 45.0%
!! ATATGTAAAATAAAAAAAAA+TGG + chr3_4:14736030-14736049 Msa0491780:intron 5.0%
!! TAAAAAAAAAATGATATATT+TGG - chr3_4:14738611-14738630 None:intergenic 5.0%
!! CAAATTATAATAAAATAAAT+CGG + chr3_4:14740162-14740181 Msa0491780:intron 5.0%
!! CAAATTATAATAAAATAAAT+CGG + chr3_4:14740162-14740181 Msa0491780:intron 5.0%
!!! TTTTAATTCATTTTTATTAT+TGG + chr3_4:14742238-14742257 Msa0491780:intron 5.0%
!!! TGTATTTTAATTATTTTTTA+CGG + chr3_4:14742356-14742375 Msa0491780:intron 5.0%
!!! TTTCAAATATAAATAATTTT+TGG + chr3_4:14742883-14742902 Msa0491780:intron 5.0%
GACGTGGCTACCAATACCAA+TGG + chr3_4:14733447-14733466 Msa0491780:CDS 50.0%
TACCAATGGCCATCTTCGTC+AGG + chr3_4:14733461-14733480 Msa0491780:CDS 50.0%
! GTTTTACCATATTGGGGGGG+GGG + chr3_4:14734257-14734276 Msa0491780:intron 50.0%
! TTTTACCATATTGGGGGGGG+GGG + chr3_4:14734258-14734277 Msa0491780:intron 50.0%
TGGGATTGTGGGAATTGGGA+AGG - chr3_4:14734354-14734373 None:intergenic 50.0%
CACGTGGGATTGTGGGAATT+GGG - chr3_4:14734358-14734377 None:intergenic 50.0%
ACACGTGGGATTGTGGGAAT+TGG - chr3_4:14734359-14734378 None:intergenic 50.0%
AGACAGACACGTGGGATTGT+GGG - chr3_4:14734365-14734384 None:intergenic 50.0%
AAGACAGACACGTGGGATTG+TGG - chr3_4:14734366-14734385 None:intergenic 50.0%
AAGGGGTAAAAACACCGGCA+TGG - chr3_4:14734392-14734411 None:intergenic 50.0%
CCAAAGAACACGACTCTTGG+CGG + chr3_4:14734712-14734731 Msa0491780:intron 50.0%
TGAGCGGTGAAGTAAGCCAA+GGG - chr3_4:14735002-14735021 None:intergenic 50.0%
ATGAGCGGTGAAGTAAGCCA+AGG - chr3_4:14735003-14735022 None:intergenic 50.0%
TTGGCTTACTTCACCGCTCA+TGG + chr3_4:14735002-14735021 Msa0491780:intron 50.0%
CCAAAGAACACGACTCTTGG+TGG - chr3_4:14734712-14734731 None:intergenic 50.0%
CCACCAAGAGTCGTGTTCTT+TGG + chr3_4:14735201-14735220 Msa0491780:intron 50.0%
! GACCAGCTAGGGTGTGTTTT+TGG - chr3_4:14735860-14735879 None:intergenic 50.0%
GAGAGAGAGAGAAAGGGAGA+AGG + chr3_4:14737861-14737880 Msa0491780:intron 50.0%
GCCCCACCACTATGTGATTA+AGG + chr3_4:14738382-14738401 Msa0491780:intron 50.0%
TGCTTTAGCACACCTTGTGC+GGG - chr3_4:14738678-14738697 None:intergenic 50.0%
AACTGAGCTATCACGGGACT+AGG - chr3_4:14739932-14739951 None:intergenic 50.0%
TAGTCCCGTGATAGCTCAGT+TGG + chr3_4:14739931-14739950 Msa0491780:intron 50.0%
GATGAATAACTGGGTGTCCG+GGG - chr3_4:14739997-14740016 None:intergenic 50.0%
GTAGGTTCTACGCAATGCGA+TGG + chr3_4:14743281-14743300 Msa0491780:intron 50.0%
CGCAATGCGATGGAAACTGT+TGG + chr3_4:14743291-14743310 Msa0491780:CDS 50.0%
GGAAACTGTTGGAACCGATG+AGG + chr3_4:14743302-14743321 Msa0491780:CDS 50.0%
ACGGGTGAGTACATCCTCAT+CGG - chr3_4:14743319-14743338 None:intergenic 50.0%
TGTCCAACTTGAGCATGCAG+TGG + chr3_4:14743404-14743423 Msa0491780:CDS 50.0%
CTTCTCTCCCCATCAGAGTA+AGG - chr3_4:14743464-14743483 None:intergenic 50.0%
ACGTTCCTTGGAGGAAGACG+TGG + chr3_4:14733431-14733450 Msa0491780:CDS 55.0%
TGCCTGACGAAGATGGCCAT+TGG - chr3_4:14733466-14733485 None:intergenic 55.0%
TTTACCATATTGGGGGGGGG+GGG + chr3_4:14734259-14734278 Msa0491780:intron 55.0%
CCGCCAAGAGTCGTGTTCTT+TGG - chr3_4:14734715-14734734 None:intergenic 55.0%
TGGCTTACTTCGCCGCTCAT+AGG - chr3_4:14734918-14734937 None:intergenic 55.0%
ATGAGCGGCGAAGTAAGCCA+AGG + chr3_4:14734918-14734937 Msa0491780:intron 55.0%
TGAGCGGCGAAGTAAGCCAA+GGG + chr3_4:14734919-14734938 Msa0491780:intron 55.0%
GAGCGGTGAAGTAAGCCAAG+GGG - chr3_4:14735001-14735020 None:intergenic 55.0%
! TAGTGGTGGGGCCCTAATTG+TGG - chr3_4:14738374-14738393 None:intergenic 55.0%
AGAGTGATTCACCCCGCACA+AGG + chr3_4:14738663-14738682 Msa0491780:intron 55.0%
GCTTTAGCACACCTTGTGCG+GGG - chr3_4:14738677-14738696 None:intergenic 55.0%
TCACCCGTGTGATTGTCACC+AGG + chr3_4:14743331-14743350 Msa0491780:CDS 55.0%
CACCCGTGTGATTGTCACCA+GGG + chr3_4:14743332-14743351 Msa0491780:CDS 55.0%
AGCCCTGGTGACAATCACAC+GGG - chr3_4:14743337-14743356 None:intergenic 55.0%
CAGCCCTGGTGACAATCACA+CGG - chr3_4:14743338-14743357 None:intergenic 55.0%
GATTGTCACCAGGGCTGAGA+AGG + chr3_4:14743341-14743360 Msa0491780:CDS 55.0%
TGGCCACTGCATGCTCAAGT+TGG - chr3_4:14743410-14743429 None:intergenic 55.0%
GGTAGCCACGTCTTCCTCCA+AGG - chr3_4:14733439-14733458 None:intergenic 60.0%
! GGAGCAGCTTTTGGTGGGGT+TGG + chr3_4:14733668-14733687 Msa0491780:intron 60.0%
TTACCATATTGGGGGGGGGG+GGG + chr3_4:14734260-14734279 Msa0491780:intron 60.0%
GAGCGGCGAAGTAAGCCAAG+GGG + chr3_4:14734920-14734939 Msa0491780:intron 60.0%
AGAAGACTCGTGCGTCGCAC+GGG - chr3_4:14740924-14740943 None:intergenic 60.0%
GAGAAGACTCGTGCGTCGCA+CGG - chr3_4:14740925-14740944 None:intergenic 60.0%
!! GTGTGCGAGCAGCGGATTGT+AGG + chr3_4:14743007-14743026 Msa0491780:intron 60.0%
!! TGCGAGCAGCGGATTGTAGG+TGG + chr3_4:14743010-14743029 Msa0491780:intron 60.0%
!! GAGCAGCGGATTGTAGGTGG+TGG + chr3_4:14743013-14743032 Msa0491780:intron 60.0%
CACCAGGGCTGAGAAGGACT+TGG + chr3_4:14743347-14743366 Msa0491780:CDS 60.0%
CTCCAAGTCCTTCTCAGCCC+TGG - chr3_4:14743352-14743371 None:intergenic 60.0%
CAGGGCTGAGAAGGACTTGG+AGG + chr3_4:14743350-14743369 Msa0491780:CDS 60.0%
TACCATATTGGGGGGGGGGG+GGG + chr3_4:14734261-14734280 Msa0491780:intron 65.0%
TGGGGGTTGTGTGCGAGCAG+CGG + chr3_4:14742999-14743018 Msa0491780:intron 65.0%
ACCATATTGGGGGGGGGGGG+GGG + chr3_4:14734262-14734281 Msa0491780:intron 70.0%
GGTGTCCGGGGTTCGAACCC+CGG - chr3_4:14739985-14740004 None:intergenic 70.0%
CCATATTGGGGGGGGGGGGG+GGG + chr3_4:14734263-14734282 Msa0491780:intron 75.0%
CATATTGGGGGGGGGGGGGG+GGG + chr3_4:14734264-14734283 Msa0491780:intron 75.0%
ATATTGGGGGGGGGGGGGGG+GGG + chr3_4:14734265-14734284 Msa0491780:intron 75.0%
AGGGGCCGGGGTTCGAACCC+CGG + chr3_4:14739977-14739996 Msa0491780:intron 75.0%
! CCCCCCCCCCCCCCCCAATA+TGG - chr3_4:14734266-14734285 None:intergenic 80.0%
! TATTGGGGGGGGGGGGGGGG+GGG + chr3_4:14734266-14734285 Msa0491780:intron 80.0%
! ATTGGGGGGGGGGGGGGGGG+GGG + chr3_4:14734267-14734286 Msa0491780:intron 85.0%
! TTGGGGGGGGGGGGGGGGGG+GGG + chr3_4:14734268-14734287 Msa0491780:intron 90.0%
! TGGGGGGGGGGGGGGGGGGG+GGG + chr3_4:14734269-14734288 Msa0491780:intron 95.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 14733270 14743488 14733270 ID=Msa0491780;Name=Msa0491780
chr3_4 mRNA 14733270 14743488 14733270 ID=Msa0491780-mRNA-1;Parent=Msa0491780;Name=Msa0491780-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|4|0|239
chr3_4 exon 14733270 14733482 14733270 ID=Msa0491780-mRNA-1:exon:4336;Parent=Msa0491780-mRNA-1
chr3_4 exon 14733675 14733887 14733675 ID=Msa0491780-mRNA-1:exon:4337;Parent=Msa0491780-mRNA-1
chr3_4 exon 14742692 14742781 14742692 ID=Msa0491780-mRNA-1:exon:4338;Parent=Msa0491780-mRNA-1
chr3_4 exon 14743285 14743488 14743285 ID=Msa0491780-mRNA-1:exon:4339;Parent=Msa0491780-mRNA-1
chr3_4 CDS 14733270 14733482 14733270 ID=Msa0491780-mRNA-1:cds;Parent=Msa0491780-mRNA-1
chr3_4 CDS 14733675 14733887 14733675 ID=Msa0491780-mRNA-1:cds;Parent=Msa0491780-mRNA-1
chr3_4 CDS 14742692 14742781 14742692 ID=Msa0491780-mRNA-1:cds;Parent=Msa0491780-mRNA-1
chr3_4 CDS 14743285 14743488 14743285 ID=Msa0491780-mRNA-1:cds;Parent=Msa0491780-mRNA-1
Gene Sequence

>Msa0491780

ATGTATAGATGGATATTGGAACCAGCAGAACGTGAAGCTTTGTTGGCAAATATAGCACTAAGAAATGCAAACATAAACTATCATGTGATTGTGGAAATTTCATGTGTCTCTTCACCTGATGAACTTTTCAATTTGAGACGTGCTTATCACAATCGATATAAACGTTCCTTGGAGGAAGACGTGGCTACCAATACCAATGGCCATCTTCGTCAGCTTTTGGTGGGGTTGGTGAGTTCATTTAGGTATGGTGGGAGTGAGGTCAATGCAAGTTTGGCACAATGTGAAGCTGATATGCTTCATGAGGCTATTAAAAACAAGAATCACAATCATGAAGAAGTAATCAGAATTCTTACAACAAGGAGCAAAACACAACTTGTAGCAACTTTCAATTGCTATAGGCATGACCATGGCATTGCTATCACTAAGAAATTGTCCGATGAAGGATCTGATAGCTTTCACAAGGCAGTGAGAATAGCCATTAGCTGCATCAATGACCATAATAAGTACTATGAAAAGGTTCTACGCAATGCGATGGAAACTGTTGGAACCGATGAGGATGTACTCACCCGTGTGATTGTCACCAGGGCTGAGAAGGACTTGGAGGACATAAGAAAGGTCTATTACAAGAGAAATAGTGTCCAACTTGAGCATGCAGTGGCCAAAAAAACTTCAGGAGATTACAAGAAATTTCTCCTTACTCTGATGGGGAGAGAAGAATAA

Protein sequence

>Msa0491780

MYRWILEPAEREALLANIALRNANINYHVIVEISCVSSPDELFNLRRAYHNRYKRSLEEDVATNTNGHLRQLLVGLVSSFRYGGSEVNASLAQCEADMLHEAIKNKNHNHEEVIRILTTRSKTQLVATFNCYRHDHGIAITKKLSDEGSDSFHKAVRIAISCINDHNKYYEKVLRNAMETVGTDEDVLTRVIVTRAEKDLEDIRKVYYKRNSVQLEHAVAKKTSGDYKKFLLTLMGREE*