Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0674070 | XP_013455276.1 | 90.340 | 559 | 54 | 0 | 1 | 559 | 1 | 559 | 0.0 | 1022 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0674070 | sp|Q0WP01|PTR9_ARATH | 64.168 | 547 | 184 | 2 | 10 | 549 | 9 | 550 | 0.0 | 681 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0674070 | A0A072UI11 | 90.340 | 559 | 54 | 0 | 1 | 559 | 1 | 559 | 0.0 | 1022 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0013270 | Msa0674070 | 0.816600 | 5.087648e-52 | -8.615850e-47 |
| Msa0017710 | Msa0674070 | 0.801648 | 8.153652e-49 | -8.615850e-47 |
| Msa0098380 | Msa0674070 | 0.800747 | 1.246687e-48 | -8.615850e-47 |
| Msa0106540 | Msa0674070 | 0.801347 | 9.399598e-49 | -8.615850e-47 |
| Msa0614960 | Msa0674070 | 0.813673 | 2.272365e-51 | -8.615850e-47 |
| Msa0629160 | Msa0674070 | 0.802357 | 5.831030e-49 | -8.615850e-47 |
| Msa0647300 | Msa0674070 | 0.811584 | 6.507083e-51 | -8.615850e-47 |
| Msa0652590 | Msa0674070 | 0.825899 | 3.644454e-54 | -8.615850e-47 |
| Msa0655370 | Msa0674070 | 0.808474 | 3.042422e-50 | -8.615850e-47 |
| Msa0657340 | Msa0674070 | 0.800461 | 1.425714e-48 | -8.615850e-47 |
| Msa0666950 | Msa0674070 | 0.802729 | 4.887158e-49 | -8.615850e-47 |
| Msa0674070 | Msa0686830 | 0.817633 | 2.979502e-52 | -8.615850e-47 |
| Msa0674070 | Msa0699170 | 0.824869 | 6.388779e-54 | -8.615850e-47 |
| Msa0674070 | Msa0720810 | 0.801752 | 7.764550e-49 | -8.615850e-47 |
| Msa0674070 | Msa0733560 | 0.816317 | 5.884383e-52 | -8.615850e-47 |
| Msa0674070 | Msa0761950 | 0.805695 | 1.179056e-49 | -8.615850e-47 |
| Msa0674070 | Msa0766170 | 0.816079 | 6.653604e-52 | -8.615850e-47 |
| Msa0674070 | Msa0789780 | 0.808445 | 3.087140e-50 | -8.615850e-47 |
| Msa0674070 | Msa0802600 | 0.809599 | 1.747329e-50 | -8.615850e-47 |
| Msa0674070 | Msa0803880 | 0.832267 | 1.041996e-55 | -8.615850e-47 |
| Msa0674070 | Msa0829990 | 0.800863 | 1.180317e-48 | -8.615850e-47 |
| Msa0674070 | Msa0838210 | 0.831196 | 1.914827e-55 | -8.615850e-47 |
| Msa0674070 | Msa0841930 | 0.811023 | 8.611746e-51 | -8.615850e-47 |
| Msa0674070 | Msa0860510 | 0.804134 | 2.499500e-49 | -8.615850e-47 |
| Msa0674070 | Msa0873880 | 0.809694 | 1.666926e-50 | -8.615850e-47 |
| Msa0674070 | Msa0873940 | 0.800865 | 1.179392e-48 | -8.615850e-47 |
| Msa0674070 | Msa0880910 | 0.804250 | 2.364217e-49 | -8.615850e-47 |
| Msa0674070 | Msa0906680 | 0.810184 | 1.307473e-50 | -8.615850e-47 |
| Msa0674070 | Msa0921790 | 0.802608 | 5.176011e-49 | -8.615850e-47 |
| Msa0674070 | Msa0975950 | 0.800026 | 1.748420e-48 | -8.615850e-47 |
| Msa0674070 | Msa1016580 | -0.804286 | 2.323538e-49 | -8.615850e-47 |
| Msa0674070 | Msa1029860 | 0.817568 | 3.081947e-52 | -8.615850e-47 |
| Msa0674070 | Msa1035050 | 0.823938 | 1.057685e-53 | -8.615850e-47 |
| Msa0674070 | Msa1049400 | 0.813108 | 3.024931e-51 | -8.615850e-47 |
| Msa0674070 | Msa1075090 | 0.832449 | 9.394208e-56 | -8.615850e-47 |
| Msa0674070 | Msa1078120 | -0.817574 | 3.072999e-52 | -8.615850e-47 |
| Msa0674070 | Msa1095590 | 0.815454 | 9.166947e-52 | -8.615850e-47 |
| Msa0674070 | Msa1107220 | 0.824959 | 6.082673e-54 | -8.615850e-47 |
| Msa0674070 | Msa1108560 | 0.821785 | 3.357587e-53 | -8.615850e-47 |
| Msa0674070 | Msa1115980 | 0.823636 | 1.245219e-53 | -8.615850e-47 |
| Msa0674070 | Msa1129120 | -0.802886 | 4.533809e-49 | -8.615850e-47 |
| Msa0674070 | Msa1136630 | 0.818107 | 2.328715e-52 | -8.615850e-47 |
| Msa0674070 | Msa1136760 | 0.816294 | 5.955215e-52 | -8.615850e-47 |
| Msa0674070 | Msa1142390 | 0.801747 | 7.781432e-49 | -8.615850e-47 |
| Msa0674070 | Msa1147010 | 0.803941 | 2.740565e-49 | -8.615850e-47 |
| Msa0674070 | Msa1150760 | 0.804122 | 2.513668e-49 | -8.615850e-47 |
| Msa0674070 | Msa1160540 | 0.807722 | 4.399482e-50 | -8.615850e-47 |
| Msa0674070 | Msa1162430 | 0.833048 | 6.671226e-56 | -8.615850e-47 |
| Msa0674070 | Msa1165460 | 0.827892 | 1.217100e-54 | -8.615850e-47 |
| Msa0674070 | Msa1174280 | 0.808994 | 2.355576e-50 | -8.615850e-47 |
| Msa0674070 | Msa1185270 | 0.803188 | 3.926722e-49 | -8.615850e-47 |
| Msa0674070 | Msa1191270 | 0.814527 | 1.472473e-51 | -8.615850e-47 |
| Msa0674070 | Msa1191530 | -0.802628 | 5.125183e-49 | -8.615850e-47 |
| Msa0674070 | Msa1223960 | 0.804996 | 1.652049e-49 | -8.615850e-47 |
| Msa0674070 | Msa1223990 | 0.801121 | 1.045643e-48 | -8.615850e-47 |
| Msa0674070 | Msa1263110 | 0.821681 | 3.548174e-53 | -8.615850e-47 |
| Msa0674070 | Msa1273320 | 0.804982 | 1.662713e-49 | -8.615850e-47 |
| Msa0674070 | Msa1320160 | 0.814652 | 1.381600e-51 | -8.615850e-47 |
| Msa0674070 | Msa1322500 | 0.805260 | 1.454838e-49 | -8.615850e-47 |
| Msa0674070 | Msa1368420 | 0.806584 | 7.663747e-50 | -8.615850e-47 |
| Msa0674070 | Msa1383220 | 0.811103 | 8.277987e-51 | -8.615850e-47 |
| Msa0674070 | Msa1384130 | 0.804803 | 1.813025e-49 | -8.615850e-47 |
| Msa0674070 | Msa1388720 | -0.800748 | 1.246073e-48 | -8.615850e-47 |
| Msa0674070 | Msa1398140 | 0.805526 | 1.279631e-49 | -8.615850e-47 |
| Msa0674070 | Msa1405830 | 0.800875 | 1.173565e-48 | -8.615850e-47 |
| Msa0674070 | Msa1407810 | 0.809689 | 1.670914e-50 | -8.615850e-47 |
| Msa0674070 | Msa1437780 | 0.810165 | 1.320110e-50 | -8.615850e-47 |
| Msa0224870 | Msa0674070 | 0.814053 | 1.873643e-51 | -8.615850e-47 |
| Msa0380110 | Msa0674070 | 0.802258 | 6.111423e-49 | -8.615850e-47 |
| Msa0386910 | Msa0674070 | 0.801292 | 9.646290e-49 | -8.615850e-47 |
| Msa0403740 | Msa0674070 | -0.802697 | 4.960189e-49 | -8.615850e-47 |
| Msa0248320 | Msa0674070 | 0.804951 | 1.688215e-49 | -8.615850e-47 |
| Msa0257760 | Msa0674070 | 0.834782 | 2.456484e-56 | -8.615850e-47 |
| Msa0278460 | Msa0674070 | 0.800792 | 1.220362e-48 | -8.615850e-47 |
| Msa0303900 | Msa0674070 | 0.813832 | 2.096023e-51 | -8.615850e-47 |
| Msa0320170 | Msa0674070 | 0.801753 | 7.761337e-49 | -8.615850e-47 |
| Msa0333770 | Msa0674070 | 0.831037 | 2.094311e-55 | -8.615850e-47 |
| Msa0346170 | Msa0674070 | 0.802101 | 6.581698e-49 | -8.615850e-47 |
| Msa0348370 | Msa0674070 | 0.803416 | 3.522308e-49 | -8.615850e-47 |
| Msa0349100 | Msa0674070 | 0.802466 | 5.535911e-49 | -8.615850e-47 |
| Msa0357550 | Msa0674070 | 0.800254 | 1.570702e-48 | -8.615850e-47 |
| Msa0357560 | Msa0674070 | 0.815768 | 7.806896e-52 | -8.615850e-47 |
| Msa0364030 | Msa0674070 | -0.800915 | 1.151960e-48 | -8.615850e-47 |
| Msa0490100 | Msa0674070 | 0.826499 | 2.623159e-54 | -8.615850e-47 |
| Msa0491780 | Msa0674070 | 0.801541 | 8.574796e-49 | -8.615850e-47 |
| Msa0501080 | Msa0674070 | 0.808647 | 2.794972e-50 | -8.615850e-47 |
| Msa0531050 | Msa0674070 | 0.802164 | 6.389342e-49 | -8.615850e-47 |
| Msa0561830 | Msa0674070 | 0.817212 | 3.707208e-52 | -8.615850e-47 |
| Msa0567330 | Msa0674070 | 0.811967 | 5.370293e-51 | -8.615850e-47 |
| Msa0567570 | Msa0674070 | 0.802583 | 5.237390e-49 | -8.615850e-47 |
| Msa0576320 | Msa0674070 | 0.801778 | 7.666720e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0674070 | MtrunA17_Chr4g0014781 | 90.340 | 559 | 54 | 0 | 1 | 559 | 1 | 559 | 0.0 | 1022 |
| Msa0674070 | MtrunA17_Chr4g0014801 | 89.803 | 559 | 57 | 0 | 1 | 559 | 1 | 559 | 0.0 | 1002 |
| Msa0674070 | MtrunA17_Chr4g0014791 | 89.107 | 560 | 57 | 2 | 1 | 559 | 1 | 557 | 0.0 | 1001 |
| Msa0674070 | MtrunA17_Chr4g0014871 | 86.096 | 561 | 76 | 2 | 1 | 559 | 1 | 561 | 0.0 | 995 |
| Msa0674070 | MtrunA17_Chr4g0014841 | 87.478 | 559 | 68 | 1 | 1 | 559 | 1 | 557 | 0.0 | 983 |
| Msa0674070 | MtrunA17_Chr4g0014861 | 85.023 | 434 | 64 | 1 | 125 | 557 | 1 | 434 | 0.0 | 771 |
| Msa0674070 | MtrunA17_Chr3g0077151 | 66.912 | 544 | 169 | 4 | 13 | 554 | 12 | 546 | 0.0 | 720 |
| Msa0674070 | MtrunA17_Chr8g0353031 | 46.593 | 543 | 258 | 6 | 30 | 551 | 19 | 550 | 1.11e-161 | 473 |
| Msa0674070 | MtrunA17_Chr7g0241741 | 41.416 | 565 | 306 | 7 | 8 | 551 | 1 | 561 | 2.32e-157 | 461 |
| Msa0674070 | MtrunA17_Chr7g0261811 | 41.918 | 563 | 303 | 6 | 17 | 558 | 15 | 574 | 3.47e-155 | 457 |
| Msa0674070 | MtrunA17_Chr8g0375311 | 41.506 | 571 | 302 | 8 | 10 | 554 | 21 | 585 | 5.31e-155 | 456 |
| Msa0674070 | MtrunA17_Chr4g0008651 | 41.007 | 556 | 301 | 6 | 17 | 552 | 22 | 570 | 1.20e-152 | 450 |
| Msa0674070 | MtrunA17_Chr4g0005901 | 39.716 | 564 | 315 | 6 | 10 | 552 | 13 | 572 | 1.21e-151 | 447 |
| Msa0674070 | MtrunA17_Chr8g0375291 | 42.370 | 557 | 293 | 8 | 10 | 542 | 21 | 573 | 3.47e-151 | 446 |
| Msa0674070 | MtrunA17_Chr7g0261791 | 41.472 | 557 | 301 | 6 | 17 | 551 | 17 | 570 | 8.56e-151 | 446 |
| Msa0674070 | MtrunA17_Chr3g0104011 | 41.476 | 569 | 300 | 8 | 10 | 552 | 3 | 564 | 2.97e-150 | 443 |
| Msa0674070 | MtrunA17_Chr3g0112671 | 39.680 | 562 | 304 | 8 | 10 | 551 | 14 | 560 | 1.40e-148 | 439 |
| Msa0674070 | MtrunA17_Chr7g0261881 | 39.076 | 563 | 319 | 6 | 17 | 558 | 15 | 574 | 5.83e-148 | 438 |
| Msa0674070 | MtrunA17_Chr7g0240381 | 40.395 | 557 | 297 | 8 | 17 | 552 | 17 | 559 | 9.02e-148 | 437 |
| Msa0674070 | MtrunA17_Chr1g0166791 | 41.652 | 557 | 299 | 8 | 17 | 551 | 12 | 564 | 1.61e-145 | 432 |
| Msa0674070 | MtrunA17_Chr3g0114501 | 40.395 | 557 | 311 | 7 | 17 | 554 | 10 | 564 | 1.06e-144 | 430 |
| Msa0674070 | MtrunA17_Chr8g0375351 | 40.780 | 564 | 302 | 8 | 17 | 554 | 28 | 585 | 3.58e-144 | 428 |
| Msa0674070 | MtrunA17_Chr1g0166711 | 42.266 | 556 | 296 | 8 | 17 | 551 | 13 | 564 | 1.56e-143 | 427 |
| Msa0674070 | MtrunA17_Chr3g0112611 | 39.755 | 571 | 310 | 10 | 3 | 551 | 11 | 569 | 1.75e-143 | 427 |
| Msa0674070 | MtrunA17_Chr7g0261771 | 40.288 | 556 | 308 | 6 | 17 | 551 | 19 | 571 | 4.75e-143 | 426 |
| Msa0674070 | MtrunA17_Chr8g0375341 | 40.177 | 565 | 304 | 10 | 17 | 555 | 28 | 584 | 1.79e-142 | 424 |
| Msa0674070 | MtrunA17_Chr1g0187241 | 39.856 | 557 | 309 | 7 | 17 | 551 | 14 | 566 | 2.82e-141 | 421 |
| Msa0674070 | MtrunA17_Chr8g0375361 | 40.354 | 565 | 309 | 7 | 17 | 557 | 27 | 587 | 1.42e-138 | 414 |
| Msa0674070 | MtrunA17_Chr8g0375321 | 38.830 | 564 | 313 | 8 | 17 | 554 | 25 | 582 | 1.46e-136 | 409 |
| Msa0674070 | MtrunA17_Chr8g0375331 | 39.024 | 574 | 313 | 9 | 1 | 548 | 1 | 563 | 1.46e-136 | 408 |
| Msa0674070 | MtrunA17_Chr1g0166741 | 39.106 | 537 | 294 | 8 | 17 | 531 | 15 | 540 | 9.54e-133 | 399 |
| Msa0674070 | MtrunA17_Chr7g0261851 | 38.819 | 559 | 312 | 6 | 17 | 551 | 16 | 568 | 3.55e-132 | 398 |
| Msa0674070 | MtrunA17_Chr1g0166771 | 40.275 | 509 | 271 | 8 | 48 | 534 | 10 | 507 | 2.96e-126 | 381 |
| Msa0674070 | MtrunA17_Chr5g0399061 | 37.565 | 575 | 328 | 8 | 12 | 559 | 10 | 580 | 3.14e-125 | 379 |
| Msa0674070 | MtrunA17_Chr3g0082631 | 42.796 | 465 | 232 | 8 | 111 | 553 | 9 | 461 | 1.62e-123 | 371 |
| Msa0674070 | MtrunA17_Chr5g0399071 | 38.947 | 570 | 309 | 11 | 21 | 559 | 17 | 578 | 4.89e-123 | 374 |
| Msa0674070 | MtrunA17_Chr4g0056431 | 37.457 | 582 | 330 | 7 | 8 | 559 | 4 | 581 | 8.48e-121 | 368 |
| Msa0674070 | MtrunA17_Chr5g0422881 | 36.852 | 559 | 321 | 9 | 28 | 559 | 19 | 572 | 2.87e-120 | 367 |
| Msa0674070 | MtrunA17_Chr3g0142101 | 36.201 | 558 | 323 | 8 | 9 | 545 | 15 | 560 | 4.83e-119 | 363 |
| Msa0674070 | MtrunA17_Chr7g0255611 | 35.563 | 568 | 329 | 11 | 1 | 541 | 7 | 564 | 4.78e-115 | 354 |
| Msa0674070 | MtrunA17_Chr7g0255621 | 36.266 | 557 | 320 | 11 | 25 | 553 | 16 | 565 | 6.36e-115 | 353 |
| Msa0674070 | MtrunA17_Chr7g0217461 | 36.942 | 582 | 330 | 12 | 10 | 559 | 5 | 581 | 7.36e-115 | 353 |
| Msa0674070 | MtrunA17_Chr6g0451841 | 37.761 | 527 | 292 | 9 | 48 | 552 | 24 | 536 | 1.18e-112 | 345 |
| Msa0674070 | MtrunA17_Chr7g0255601 | 34.386 | 570 | 343 | 9 | 9 | 551 | 7 | 572 | 2.44e-109 | 339 |
| Msa0674070 | MtrunA17_Chr4g0063591 | 39.493 | 552 | 305 | 8 | 16 | 545 | 9 | 553 | 6.25e-109 | 337 |
| Msa0674070 | MtrunA17_Chr7g0214461 | 34.364 | 550 | 327 | 10 | 23 | 548 | 72 | 611 | 1.75e-108 | 338 |
| Msa0674070 | MtrunA17_Chr5g0415791 | 35.548 | 557 | 317 | 9 | 29 | 551 | 29 | 577 | 5.68e-108 | 336 |
| Msa0674070 | MtrunA17_Chr1g0166731 | 40.700 | 457 | 246 | 8 | 116 | 551 | 9 | 461 | 3.75e-107 | 329 |
| Msa0674070 | MtrunA17_Chr5g0400371 | 34.896 | 576 | 339 | 10 | 3 | 548 | 86 | 655 | 2.53e-106 | 333 |
| Msa0674070 | MtrunA17_Chr7g0261661 | 39.427 | 454 | 251 | 6 | 119 | 551 | 3 | 453 | 3.07e-106 | 328 |
| Msa0674070 | MtrunA17_Chr3g0142091 | 35.943 | 562 | 323 | 11 | 20 | 558 | 17 | 564 | 1.26e-105 | 328 |
| Msa0674070 | MtrunA17_Chr1g0213711 | 33.795 | 577 | 340 | 12 | 9 | 559 | 1 | 561 | 7.84e-105 | 327 |
| Msa0674070 | MtrunA17_Chr4g0054891 | 34.568 | 567 | 330 | 10 | 10 | 546 | 91 | 646 | 6.29e-104 | 327 |
| Msa0674070 | MtrunA17_Chr5g0415961 | 33.735 | 581 | 345 | 10 | 11 | 558 | 6 | 579 | 1.06e-103 | 324 |
| Msa0674070 | MtrunA17_Chr7g0261751 | 38.004 | 471 | 233 | 8 | 17 | 430 | 19 | 487 | 7.68e-103 | 320 |
| Msa0674070 | MtrunA17_Chr8g0362711 | 34.982 | 566 | 327 | 9 | 18 | 550 | 13 | 570 | 4.48e-102 | 319 |
| Msa0674070 | MtrunA17_Chr4g0059971 | 35.584 | 548 | 321 | 10 | 35 | 552 | 40 | 585 | 1.01e-100 | 317 |
| Msa0674070 | MtrunA17_Chr7g0218851 | 33.095 | 559 | 324 | 12 | 23 | 548 | 40 | 581 | 3.04e-100 | 315 |
| Msa0674070 | MtrunA17_Chr2g0276751 | 35.626 | 567 | 333 | 11 | 10 | 558 | 19 | 571 | 6.19e-100 | 314 |
| Msa0674070 | MtrunA17_Chr2g0284701 | 33.560 | 587 | 351 | 11 | 2 | 551 | 4 | 588 | 2.55e-99 | 313 |
| Msa0674070 | MtrunA17_Chr1g0157601 | 34.559 | 544 | 319 | 10 | 33 | 548 | 19 | 553 | 1.64e-97 | 307 |
| Msa0674070 | MtrunA17_Chr1g0157611 | 34.281 | 563 | 331 | 10 | 16 | 548 | 1 | 554 | 1.67e-97 | 307 |
| Msa0674070 | MtrunA17_Chr8g0379971 | 34.581 | 561 | 310 | 11 | 15 | 522 | 6 | 562 | 1.77e-97 | 308 |
| Msa0674070 | MtrunA17_Chr3g0133341 | 33.636 | 550 | 333 | 9 | 25 | 551 | 10 | 550 | 4.33e-96 | 303 |
| Msa0674070 | MtrunA17_Chr4g0059991 | 33.755 | 554 | 320 | 11 | 35 | 550 | 28 | 572 | 1.09e-95 | 303 |
| Msa0674070 | MtrunA17_Chr8g0390331 | 33.698 | 549 | 337 | 10 | 23 | 548 | 9 | 553 | 1.43e-95 | 303 |
| Msa0674070 | MtrunA17_Chr4g0011041 | 31.794 | 563 | 345 | 9 | 17 | 548 | 24 | 578 | 5.14e-95 | 301 |
| Msa0674070 | MtrunA17_Chr8g0362781 | 32.628 | 567 | 343 | 8 | 23 | 555 | 24 | 585 | 9.90e-95 | 301 |
| Msa0674070 | MtrunA17_Chr5g0439381 | 35.305 | 558 | 321 | 9 | 17 | 551 | 16 | 556 | 2.43e-94 | 300 |
| Msa0674070 | MtrunA17_Chr1g0147631 | 33.509 | 570 | 339 | 11 | 4 | 548 | 10 | 564 | 5.14e-93 | 296 |
| Msa0674070 | MtrunA17_Chr7g0214731 | 31.720 | 558 | 346 | 9 | 30 | 555 | 62 | 616 | 2.83e-92 | 296 |
| Msa0674070 | MtrunA17_Chr1g0157621 | 34.100 | 522 | 310 | 9 | 53 | 548 | 4 | 517 | 1.03e-91 | 292 |
| Msa0674070 | MtrunA17_Chr4g0060001 | 32.675 | 557 | 340 | 8 | 27 | 555 | 27 | 576 | 8.46e-91 | 291 |
| Msa0674070 | MtrunA17_Chr4g0059981 | 33.677 | 582 | 341 | 12 | 3 | 552 | 14 | 582 | 3.62e-90 | 289 |
| Msa0674070 | MtrunA17_Chr7g0240271 | 30.619 | 565 | 352 | 8 | 17 | 549 | 12 | 568 | 1.64e-87 | 282 |
| Msa0674070 | MtrunA17_Chr4g0011471 | 31.818 | 528 | 323 | 9 | 50 | 548 | 37 | 556 | 9.52e-87 | 279 |
| Msa0674070 | MtrunA17_Chr4g0003761 | 33.273 | 553 | 332 | 13 | 25 | 550 | 27 | 569 | 1.13e-86 | 280 |
| Msa0674070 | MtrunA17_Chr2g0331471 | 33.972 | 574 | 334 | 17 | 10 | 550 | 68 | 629 | 5.03e-86 | 281 |
| Msa0674070 | MtrunA17_Chr2g0331521 | 30.536 | 560 | 355 | 10 | 17 | 548 | 10 | 563 | 1.52e-85 | 277 |
| Msa0674070 | MtrunA17_Chr4g0069581 | 34.497 | 487 | 286 | 10 | 87 | 552 | 44 | 518 | 5.45e-85 | 275 |
| Msa0674070 | MtrunA17_Chr2g0331511 | 31.690 | 568 | 350 | 12 | 10 | 548 | 4 | 562 | 8.34e-85 | 276 |
| Msa0674070 | MtrunA17_Chr2g0331481 | 32.404 | 574 | 344 | 15 | 10 | 550 | 4 | 566 | 1.30e-84 | 275 |
| Msa0674070 | MtrunA17_Chr8g0379991 | 34.867 | 565 | 304 | 11 | 58 | 559 | 9 | 572 | 8.59e-84 | 271 |
| Msa0674070 | MtrunA17_Chr1g0177591 | 32.664 | 548 | 332 | 15 | 21 | 550 | 36 | 564 | 1.64e-83 | 271 |
| Msa0674070 | MtrunA17_Chr7g0271221 | 31.919 | 542 | 342 | 10 | 29 | 553 | 17 | 548 | 1.16e-82 | 269 |
| Msa0674070 | MtrunA17_Chr1g0193391 | 30.935 | 556 | 355 | 11 | 17 | 553 | 3 | 548 | 4.98e-82 | 268 |
| Msa0674070 | MtrunA17_Chr8g0362801 | 34.483 | 464 | 268 | 8 | 119 | 551 | 3 | 461 | 6.42e-82 | 264 |
| Msa0674070 | MtrunA17_Chr2g0331461 | 31.414 | 573 | 351 | 15 | 10 | 550 | 4 | 566 | 1.04e-78 | 260 |
| Msa0674070 | MtrunA17_Chr7g0261731 | 40.663 | 332 | 174 | 5 | 17 | 327 | 19 | 348 | 1.40e-78 | 251 |
| Msa0674070 | MtrunA17_Chr7g0240281 | 30.700 | 557 | 344 | 8 | 27 | 549 | 22 | 570 | 1.06e-76 | 253 |
| Msa0674070 | MtrunA17_Chr3g0112631 | 42.066 | 271 | 151 | 3 | 286 | 551 | 3 | 272 | 6.27e-74 | 237 |
| Msa0674070 | MtrunA17_Chr2g0326211 | 31.818 | 572 | 331 | 14 | 16 | 552 | 1 | 548 | 1.01e-71 | 239 |
| Msa0674070 | MtrunA17_Chr5g0415841 | 32.794 | 433 | 265 | 6 | 137 | 551 | 35 | 459 | 3.16e-71 | 236 |
| Msa0674070 | MtrunA17_Chr2g0325951 | 30.298 | 571 | 341 | 13 | 16 | 552 | 1 | 548 | 1.03e-69 | 234 |
| Msa0674070 | MtrunA17_Chr2g0325961 | 31.414 | 573 | 333 | 12 | 16 | 552 | 1 | 549 | 2.42e-69 | 233 |
| Msa0674070 | MtrunA17_Chr1g0177611 | 32.301 | 452 | 271 | 14 | 117 | 550 | 1 | 435 | 9.79e-67 | 223 |
| Msa0674070 | MtrunA17_Chr7g0235521 | 31.096 | 447 | 276 | 7 | 127 | 549 | 19 | 457 | 1.81e-65 | 221 |
| Msa0674070 | MtrunA17_Chr7g0240181 | 30.872 | 447 | 277 | 7 | 127 | 549 | 19 | 457 | 2.65e-64 | 218 |
| Msa0674070 | MtrunA17_Chr7g0240131 | 30.872 | 447 | 277 | 7 | 127 | 549 | 19 | 457 | 2.97e-64 | 218 |
| Msa0674070 | MtrunA17_Chr7g0240211 | 30.872 | 447 | 277 | 7 | 127 | 549 | 19 | 457 | 3.30e-64 | 217 |
| Msa0674070 | MtrunA17_Chr1g0177631 | 31.858 | 452 | 273 | 13 | 117 | 550 | 1 | 435 | 3.88e-62 | 211 |
| Msa0674070 | MtrunA17_Chr4g0014851 | 82.759 | 116 | 19 | 1 | 1 | 115 | 1 | 116 | 1.59e-61 | 200 |
| Msa0674070 | MtrunA17_Chr3g0142111 | 40.520 | 269 | 149 | 3 | 9 | 268 | 26 | 292 | 4.01e-59 | 200 |
| Msa0674070 | MtrunA17_Chr4g0060071 | 38.376 | 271 | 162 | 4 | 282 | 551 | 32 | 298 | 7.01e-59 | 198 |
| Msa0674070 | MtrunA17_Chr7g0240151 | 29.530 | 447 | 265 | 8 | 127 | 549 | 19 | 439 | 1.09e-57 | 199 |
| Msa0674070 | MtrunA17_Chr7g0234151 | 30.524 | 439 | 276 | 8 | 116 | 548 | 3 | 418 | 2.88e-53 | 186 |
| Msa0674070 | MtrunA17_Chr7g0234181 | 30.751 | 413 | 263 | 7 | 137 | 548 | 23 | 413 | 5.14e-52 | 183 |
| Msa0674070 | MtrunA17_Chr7g0234381 | 30.612 | 441 | 273 | 10 | 116 | 548 | 3 | 418 | 6.33e-52 | 183 |
| Msa0674070 | MtrunA17_Chr7g0261721 | 42.500 | 200 | 114 | 1 | 352 | 551 | 3 | 201 | 5.57e-51 | 175 |
| Msa0674070 | MtrunA17_Chr3g0142121 | 36.015 | 261 | 155 | 5 | 287 | 545 | 12 | 262 | 2.94e-50 | 174 |
| Msa0674070 | MtrunA17_Chr3g0112651 | 37.705 | 183 | 96 | 5 | 116 | 283 | 21 | 200 | 1.20e-31 | 121 |
| Msa0674070 | MtrunA17_Chr1g0166721 | 52.525 | 99 | 47 | 0 | 17 | 115 | 13 | 111 | 7.39e-29 | 112 |
| Msa0674070 | MtrunA17_Chr3g0112661 | 42.241 | 116 | 66 | 1 | 17 | 132 | 19 | 133 | 1.09e-27 | 108 |
| Msa0674070 | MtrunA17_Chr7g0261671 | 44.444 | 99 | 55 | 0 | 17 | 115 | 20 | 118 | 2.43e-25 | 100 |
| Msa0674070 | MtrunA17_Chr1g0147591 | 31.500 | 200 | 117 | 7 | 141 | 324 | 3 | 198 | 1.26e-24 | 101 |
| Msa0674070 | MtrunA17_Chr2g0326221 | 27.826 | 230 | 136 | 3 | 322 | 551 | 24 | 223 | 1.37e-20 | 90.9 |
| Msa0674070 | MtrunA17_Chr4g0060061 | 34.211 | 114 | 74 | 1 | 137 | 249 | 15 | 128 | 6.89e-19 | 83.2 |
| Msa0674070 | MtrunA17_Chr3g0082621 | 40.000 | 90 | 54 | 0 | 44 | 133 | 1 | 90 | 8.09e-18 | 78.6 |
| Msa0674070 | MtrunA17_Chr7g0261831 | 35.099 | 151 | 79 | 4 | 252 | 388 | 4 | 149 | 5.21e-17 | 80.1 |
| Msa0674070 | MtrunA17_Chr1g0147581 | 36.842 | 114 | 64 | 2 | 413 | 525 | 10 | 116 | 2.30e-16 | 75.5 |
| Msa0674070 | MtrunA17_Chr7g0240221 | 26.263 | 99 | 73 | 0 | 17 | 115 | 15 | 113 | 2.00e-12 | 64.3 |
| Msa0674070 | MtrunA17_Chr7g0240191 | 26.263 | 99 | 73 | 0 | 17 | 115 | 15 | 113 | 2.00e-12 | 64.3 |
| Msa0674070 | MtrunA17_Chr7g0240161 | 26.263 | 99 | 73 | 0 | 17 | 115 | 15 | 113 | 2.00e-12 | 64.3 |
| Msa0674070 | MtrunA17_Chr4g0060051 | 33.010 | 103 | 69 | 0 | 10 | 112 | 3 | 105 | 2.29e-12 | 64.3 |
| Msa0674070 | MtrunA17_Chr7g0240141 | 25.253 | 99 | 74 | 0 | 17 | 115 | 15 | 113 | 7.50e-12 | 62.8 |
| Msa0674070 | MtrunA17_Chr7g0261821 | 42.857 | 63 | 36 | 0 | 489 | 551 | 1 | 63 | 2.68e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0674070 | AT1G22540.1 | 64.168 | 547 | 184 | 2 | 10 | 549 | 9 | 550 | 0.0 | 681 |
| Msa0674070 | AT1G72125.1 | 58.696 | 552 | 221 | 5 | 12 | 556 | 10 | 561 | 0.0 | 623 |
| Msa0674070 | AT1G72120.1 | 58.036 | 560 | 220 | 8 | 1 | 552 | 1 | 553 | 0.0 | 607 |
| Msa0674070 | AT1G72140.1 | 56.000 | 550 | 212 | 5 | 16 | 551 | 19 | 552 | 0.0 | 599 |
| Msa0674070 | AT1G22550.1 | 55.654 | 566 | 229 | 6 | 1 | 552 | 3 | 560 | 0.0 | 593 |
| Msa0674070 | AT1G22570.1 | 55.851 | 564 | 221 | 7 | 10 | 552 | 5 | 561 | 0.0 | 577 |
| Msa0674070 | AT1G22570.2 | 56.061 | 528 | 208 | 6 | 42 | 552 | 4 | 524 | 0.0 | 545 |
| Msa0674070 | AT1G72130.1 | 53.271 | 535 | 222 | 8 | 29 | 555 | 23 | 537 | 0.0 | 536 |
| Msa0674070 | AT3G54450.1 | 44.936 | 543 | 268 | 8 | 29 | 551 | 11 | 542 | 5.83e-166 | 483 |
| Msa0674070 | AT5G01180.2 | 40.357 | 560 | 308 | 7 | 17 | 554 | 11 | 566 | 6.25e-150 | 442 |
| Msa0674070 | AT5G01180.3 | 40.357 | 560 | 308 | 7 | 17 | 554 | 11 | 566 | 6.25e-150 | 442 |
| Msa0674070 | AT5G01180.1 | 40.357 | 560 | 308 | 7 | 17 | 554 | 11 | 566 | 6.25e-150 | 442 |
| Msa0674070 | AT3G54140.1 | 40.283 | 566 | 311 | 7 | 10 | 552 | 3 | 564 | 1.45e-148 | 439 |
| Msa0674070 | AT3G54140.2 | 40.283 | 566 | 311 | 7 | 10 | 552 | 3 | 564 | 1.45e-148 | 439 |
| Msa0674070 | AT1G72130.2 | 52.326 | 430 | 178 | 7 | 133 | 555 | 10 | 419 | 2.83e-148 | 433 |
| Msa0674070 | AT1G72130.3 | 52.326 | 430 | 178 | 7 | 133 | 555 | 10 | 419 | 2.83e-148 | 433 |
| Msa0674070 | AT2G02040.1 | 40.278 | 576 | 316 | 8 | 3 | 554 | 13 | 584 | 7.59e-146 | 433 |
| Msa0674070 | AT2G37900.1 | 41.197 | 568 | 290 | 11 | 10 | 551 | 17 | 566 | 2.39e-145 | 431 |
| Msa0674070 | AT3G53960.1 | 40.172 | 580 | 308 | 10 | 3 | 551 | 2 | 573 | 2.19e-144 | 430 |
| Msa0674070 | AT1G62200.1 | 41.304 | 552 | 285 | 7 | 17 | 541 | 38 | 577 | 9.09e-142 | 422 |
| Msa0674070 | AT2G40460.1 | 39.714 | 559 | 312 | 8 | 11 | 551 | 4 | 555 | 2.85e-137 | 410 |
| Msa0674070 | AT1G62200.2 | 39.243 | 581 | 285 | 8 | 17 | 541 | 38 | 606 | 3.25e-135 | 407 |
| Msa0674070 | AT1G62200.3 | 39.243 | 581 | 285 | 8 | 17 | 541 | 52 | 620 | 5.25e-135 | 407 |
| Msa0674070 | AT2G02020.1 | 39.964 | 563 | 295 | 11 | 1 | 550 | 10 | 542 | 4.88e-133 | 399 |
| Msa0674070 | AT5G46040.1 | 39.065 | 535 | 303 | 5 | 17 | 531 | 13 | 544 | 9.26e-133 | 399 |
| Msa0674070 | AT5G46050.1 | 38.489 | 556 | 317 | 6 | 17 | 551 | 13 | 564 | 1.89e-131 | 396 |
| Msa0674070 | AT5G14940.1 | 39.963 | 543 | 294 | 10 | 29 | 548 | 5 | 538 | 9.73e-127 | 382 |
| Msa0674070 | AT2G37900.2 | 41.468 | 504 | 251 | 11 | 74 | 551 | 2 | 487 | 2.29e-125 | 377 |
| Msa0674070 | AT2G02020.2 | 38.968 | 562 | 281 | 13 | 1 | 550 | 10 | 521 | 6.47e-119 | 362 |
| Msa0674070 | AT3G01350.1 | 38.603 | 544 | 298 | 9 | 33 | 546 | 9 | 546 | 2.13e-116 | 356 |
| Msa0674070 | AT1G68570.1 | 37.454 | 542 | 304 | 7 | 40 | 551 | 32 | 568 | 1.78e-112 | 347 |
| Msa0674070 | AT1G68570.2 | 37.430 | 537 | 301 | 7 | 45 | 551 | 7 | 538 | 5.57e-112 | 345 |
| Msa0674070 | AT1G69870.1 | 36.738 | 558 | 308 | 10 | 28 | 551 | 48 | 594 | 1.08e-111 | 346 |
| Msa0674070 | AT2G26690.1 | 38.156 | 553 | 310 | 8 | 16 | 545 | 9 | 552 | 4.93e-110 | 340 |
| Msa0674070 | AT1G12110.1 | 34.583 | 587 | 338 | 10 | 3 | 559 | 7 | 577 | 1.15e-109 | 340 |
| Msa0674070 | AT1G32450.1 | 34.151 | 571 | 339 | 8 | 10 | 548 | 16 | 581 | 8.20e-108 | 336 |
| Msa0674070 | AT4G21680.1 | 35.993 | 564 | 326 | 13 | 17 | 550 | 14 | 572 | 1.27e-104 | 327 |
| Msa0674070 | AT3G16180.1 | 35.063 | 559 | 319 | 12 | 25 | 548 | 16 | 565 | 4.12e-100 | 315 |
| Msa0674070 | AT2G26690.2 | 37.452 | 526 | 297 | 8 | 43 | 545 | 3 | 519 | 7.16e-100 | 313 |
| Msa0674070 | AT1G52190.1 | 34.375 | 544 | 315 | 10 | 40 | 548 | 30 | 566 | 1.04e-99 | 315 |
| Msa0674070 | AT1G18880.1 | 34.767 | 558 | 321 | 11 | 35 | 558 | 23 | 571 | 2.47e-99 | 313 |
| Msa0674070 | AT1G59740.1 | 35.140 | 572 | 332 | 12 | 3 | 546 | 12 | 572 | 5.20e-99 | 312 |
| Msa0674070 | AT3G21670.1 | 35.791 | 556 | 316 | 11 | 21 | 551 | 19 | 558 | 2.61e-98 | 310 |
| Msa0674070 | AT1G27040.1 | 32.509 | 566 | 354 | 8 | 6 | 550 | 2 | 560 | 6.42e-98 | 308 |
| Msa0674070 | AT5G46050.2 | 38.208 | 424 | 249 | 4 | 137 | 551 | 33 | 452 | 2.18e-97 | 304 |
| Msa0674070 | AT1G27040.2 | 32.793 | 555 | 345 | 8 | 17 | 550 | 9 | 556 | 2.67e-97 | 307 |
| Msa0674070 | AT1G33440.1 | 36.077 | 571 | 319 | 11 | 7 | 548 | 14 | 567 | 2.77e-96 | 305 |
| Msa0674070 | AT1G69850.1 | 32.530 | 581 | 350 | 9 | 9 | 551 | 3 | 579 | 3.80e-96 | 305 |
| Msa0674070 | AT2G26690.3 | 37.087 | 515 | 292 | 8 | 54 | 545 | 2 | 507 | 4.05e-95 | 300 |
| Msa0674070 | AT5G62730.1 | 31.922 | 567 | 357 | 10 | 1 | 551 | 32 | 585 | 6.44e-94 | 299 |
| Msa0674070 | AT5G62680.1 | 33.394 | 551 | 328 | 10 | 35 | 551 | 47 | 592 | 4.58e-93 | 297 |
| Msa0674070 | AT1G27040.3 | 33.081 | 529 | 326 | 8 | 43 | 550 | 7 | 528 | 3.64e-91 | 290 |
| Msa0674070 | AT1G27080.1 | 33.094 | 556 | 330 | 10 | 29 | 556 | 12 | 553 | 3.87e-90 | 289 |
| Msa0674070 | AT3G47960.1 | 32.734 | 556 | 323 | 12 | 35 | 551 | 65 | 608 | 6.69e-89 | 287 |
| Msa0674070 | AT5G13400.1 | 31.261 | 563 | 353 | 8 | 20 | 551 | 52 | 611 | 3.09e-88 | 285 |
| Msa0674070 | AT5G62730.2 | 32.015 | 531 | 338 | 9 | 37 | 551 | 3 | 526 | 8.15e-88 | 281 |
| Msa0674070 | AT5G19640.1 | 32.353 | 544 | 319 | 13 | 32 | 548 | 60 | 581 | 4.50e-87 | 281 |
| Msa0674070 | AT5G28470.2 | 30.991 | 555 | 346 | 12 | 28 | 554 | 14 | 559 | 2.93e-84 | 273 |
| Msa0674070 | AT1G69860.1 | 33.880 | 549 | 316 | 11 | 35 | 554 | 22 | 552 | 3.98e-83 | 270 |
| Msa0674070 | AT1G27080.2 | 33.078 | 523 | 308 | 10 | 62 | 556 | 3 | 511 | 1.98e-82 | 267 |
| Msa0674070 | AT5G28470.1 | 30.811 | 555 | 345 | 13 | 28 | 554 | 14 | 557 | 9.02e-82 | 266 |
| Msa0674070 | AT3G25280.1 | 32.781 | 543 | 318 | 12 | 21 | 548 | 11 | 521 | 5.13e-80 | 261 |
| Msa0674070 | AT3G25260.1 | 33.455 | 550 | 317 | 13 | 12 | 548 | 2 | 515 | 1.91e-78 | 256 |
| Msa0674070 | AT3G45680.1 | 31.533 | 574 | 333 | 15 | 11 | 555 | 2 | 544 | 1.01e-71 | 240 |
| Msa0674070 | AT3G45650.1 | 29.840 | 563 | 346 | 16 | 17 | 555 | 8 | 545 | 5.71e-71 | 238 |
| Msa0674070 | AT3G45710.1 | 30.866 | 554 | 322 | 13 | 31 | 552 | 21 | 545 | 8.55e-70 | 234 |
| Msa0674070 | AT3G45700.1 | 30.309 | 551 | 328 | 14 | 30 | 555 | 15 | 534 | 8.16e-69 | 232 |
| Msa0674070 | AT3G45650.2 | 28.523 | 589 | 346 | 17 | 17 | 555 | 8 | 571 | 1.22e-65 | 224 |
| Msa0674070 | AT3G45660.1 | 30.210 | 523 | 310 | 13 | 58 | 552 | 48 | 543 | 2.31e-63 | 218 |
| Msa0674070 | AT3G45660.3 | 30.210 | 523 | 310 | 13 | 58 | 552 | 48 | 543 | 2.31e-63 | 218 |
| Msa0674070 | AT3G45720.1 | 30.642 | 545 | 319 | 14 | 40 | 555 | 28 | 542 | 3.88e-63 | 217 |
| Msa0674070 | AT5G11570.1 | 27.746 | 519 | 301 | 10 | 40 | 548 | 22 | 476 | 4.19e-63 | 215 |
| Msa0674070 | AT3G45660.2 | 30.210 | 523 | 310 | 13 | 58 | 552 | 69 | 564 | 4.79e-63 | 217 |
| Msa0674070 | AT3G45690.1 | 29.533 | 535 | 292 | 15 | 30 | 540 | 17 | 490 | 8.39e-57 | 199 |
| Msa0674070 | AT2G38100.2 | 28.679 | 530 | 312 | 17 | 59 | 558 | 2 | 495 | 3.48e-48 | 175 |
| Msa0674070 | AT2G38100.1 | 29.333 | 525 | 315 | 17 | 59 | 558 | 18 | 511 | 5.43e-48 | 175 |
| Msa0674070 | AT2G38100.3 | 29.333 | 525 | 315 | 17 | 59 | 558 | 24 | 517 | 5.72e-48 | 175 |
Find 123 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCTTTCTTTCTTTATTA+AGG | 0.104112 | 4_4:-21106840 | None:intergenic |
| AACCTTGTGTTCAAGCTTTC+GGG | 0.149446 | 4_4:+21109229 | Msa0674070:CDS |
| TACTAAGATTGATTCCAATT+TGG | 0.152420 | 4_4:+21110541 | Msa0674070:CDS |
| TGGGCTACAACTTTAGTTTA+TGG | 0.166899 | 4_4:+21110561 | Msa0674070:CDS |
| TGTTAATATCAAATAATATA+TGG | 0.172615 | 4_4:+21111336 | Msa0674070:three_prime_UTR |
| CTTCTAGCTCTGTGCTCTTT+AGG | 0.180783 | 4_4:-21109276 | None:intergenic |
| GGACATTTATTGACGGATTA+TGG | 0.187042 | 4_4:+21111452 | Msa0674070:three_prime_UTR |
| CTAGAAGCTCATTCTTTAAT+TGG | 0.206643 | 4_4:+21109292 | Msa0674070:CDS |
| GCTACAAGTTTCATCTTCTT+TGG | 0.207090 | 4_4:-21110490 | None:intergenic |
| GATAACATTAGTTGGGTTCT+TGG | 0.227701 | 4_4:+21109375 | Msa0674070:CDS |
| CCCATGCTTCTTAGTTCATT+TGG | 0.244157 | 4_4:-21111011 | None:intergenic |
| TTTCTTTCTTTCTTTATTAA+GGG | 0.245106 | 4_4:-21106839 | None:intergenic |
| GCTTCTCTACTTCCTATCTT+TGG | 0.259450 | 4_4:+21108539 | Msa0674070:CDS |
| ATTAGTTGGGTTCTTGGATT+TGG | 0.259493 | 4_4:+21109381 | Msa0674070:CDS |
| GAAAGACAACAATTTCAAAA+TGG | 0.266196 | 4_4:-21111408 | None:intergenic |
| GACATATAGGTTTAACATTA+AGG | 0.274752 | 4_4:+21109458 | Msa0674070:CDS |
| CTGCTGAAAATGTGAATATC+TGG | 0.276082 | 4_4:+21108507 | Msa0674070:CDS |
| TAACTTATCAACAACGGATT+TGG | 0.276561 | 4_4:+21109548 | Msa0674070:CDS |
| TTAGGTCCAAATCTGGTTAT+TGG | 0.277876 | 4_4:+21107059 | Msa0674070:CDS |
| AAACCTTGTGTTCAAGCTTT+CGG | 0.279638 | 4_4:+21109228 | Msa0674070:CDS |
| ACTAAGATTGATTCCAATTT+GGG | 0.281055 | 4_4:+21110542 | Msa0674070:CDS |
| ACCTACAATTTAACCTTAAT+CGG | 0.292775 | 4_4:-21111281 | None:intergenic |
| AAGAGTCCCTTTATTAGAAT+TGG | 0.299704 | 4_4:+21109489 | Msa0674070:CDS |
| GCATGAAAATGCTCTATATT+TGG | 0.301247 | 4_4:+21111368 | Msa0674070:three_prime_UTR |
| ACTAAAGTTGTAGCCCAAAT+TGG | 0.304028 | 4_4:-21110555 | None:intergenic |
| TACAAGACCAATTCTAATAA+AGG | 0.306966 | 4_4:-21109496 | None:intergenic |
| CCATGCTTCTTAGTTCATTT+GGG | 0.311879 | 4_4:-21111010 | None:intergenic |
| CTTGCTGGATTAAGTGTGTT+GGG | 0.320199 | 4_4:+21111185 | Msa0674070:CDS |
| TGCTTCTCTTATCTATATCT+TGG | 0.321108 | 4_4:+21108610 | Msa0674070:CDS |
| ACAAGGATAGTCACCGATTA+AGG | 0.328728 | 4_4:+21111268 | Msa0674070:exon |
| ATGGAGAGAACAATATTTCC+TGG | 0.329908 | 4_4:+21110633 | Msa0674070:CDS |
| GCTCAGTTAGCTCTTGTTGA+TGG | 0.342685 | 4_4:+21107007 | Msa0674070:CDS |
| GCACTCTATTTGAGTATTGT+TGG | 0.352342 | 4_4:+21111038 | Msa0674070:CDS |
| TCATCTTCTTTGGATCCCTT+TGG | 0.353258 | 4_4:-21110480 | None:intergenic |
| GTTAATATCAAATAATATAT+GGG | 0.355240 | 4_4:+21111337 | Msa0674070:three_prime_UTR |
| CGTTATCTACGATTGCATAT+TGG | 0.358179 | 4_4:+21110716 | Msa0674070:CDS |
| ATCACAATGCTTCAAAGAAT+TGG | 0.359553 | 4_4:+21110777 | Msa0674070:CDS |
| AAAGAAGTGAATTATTCAAT+AGG | 0.359764 | 4_4:+21106946 | Msa0674070:five_prime_UTR |
| AGCTTCTAACAAAACTTCAT+TGG | 0.359790 | 4_4:-21106987 | None:intergenic |
| AAAGACAACAATTTCAAAAT+GGG | 0.361065 | 4_4:-21111407 | None:intergenic |
| GCAGAGAGGGTATCATATTA+TGG | 0.365676 | 4_4:+21108425 | Msa0674070:CDS |
| TTGTTGCAGCTATAAGAAAT+TGG | 0.372408 | 4_4:+21109520 | Msa0674070:CDS |
| TGATCTCCAATAACCAGATT+TGG | 0.395184 | 4_4:-21107065 | None:intergenic |
| CTCATTGGAACAGTTGCAAT+TGG | 0.397891 | 4_4:-21110897 | None:intergenic |
| CAACTGTTCCAATGAGTATA+TGG | 0.398189 | 4_4:+21110904 | Msa0674070:CDS |
| AGATCAGCTTGGTTTATCAT+AGG | 0.400187 | 4_4:+21107082 | Msa0674070:CDS |
| TATTCAATAGGTTTGTTTGA+TGG | 0.423664 | 4_4:+21106958 | Msa0674070:exon |
| CCACTAGCAAGATCTATAAC+TGG | 0.427746 | 4_4:+21110741 | Msa0674070:CDS |
| ACAAGACCAATTCTAATAAA+GGG | 0.428166 | 4_4:-21109495 | None:intergenic |
| CTCCATAGAACTCCCTTGCT+TGG | 0.430946 | 4_4:-21110616 | None:intergenic |
| GAAAATATTAGTGGCAAAGA+TGG | 0.431214 | 4_4:+21111101 | Msa0674070:CDS |
| TGCTCGGAACAAGGACATAT+AGG | 0.436004 | 4_4:+21109445 | Msa0674070:CDS |
| ACTTGCTGGATTAAGTGTGT+TGG | 0.452550 | 4_4:+21111184 | Msa0674070:CDS |
| CACCAAGCAAGGGAGTTCTA+TGG | 0.456626 | 4_4:+21110614 | Msa0674070:CDS |
| GCGTCTCTTCAAACGATAAA+CGG | 0.459809 | 4_4:+21110672 | Msa0674070:CDS |
| AAATAATATATGGGATTGAA+TGG | 0.460451 | 4_4:+21111346 | Msa0674070:three_prime_UTR |
| TTCTTTCTTTCTTTATTAAG+GGG | 0.462459 | 4_4:-21106838 | None:intergenic |
| ATATACAAGATAACATTAGT+TGG | 0.471533 | 4_4:+21109367 | Msa0674070:CDS |
| CCTGCAGTTAGGTCCAAATC+TGG | 0.471649 | 4_4:+21107052 | Msa0674070:CDS |
| GAAGCTCATTCTTTAATTGG+TGG | 0.474451 | 4_4:+21109295 | Msa0674070:CDS |
| ACCAACCACCATATACTCAT+TGG | 0.479829 | 4_4:-21110912 | None:intergenic |
| TTTACATTCTTCACCAAGCA+AGG | 0.480785 | 4_4:+21110603 | Msa0674070:CDS |
| GTTGCAGTGCTCTGCTTGAG+TGG | 0.480805 | 4_4:-21108482 | None:intergenic |
| TAATACAATTTCCAGGGACT+AGG | 0.483160 | 4_4:+21109093 | Msa0674070:intron |
| GTATCATATTATGGAATTCA+AGG | 0.491184 | 4_4:+21108434 | Msa0674070:CDS |
| TATACAAGATAACATTAGTT+GGG | 0.492477 | 4_4:+21109368 | Msa0674070:CDS |
| GCAAAGATGGACATGATAGT+TGG | 0.492895 | 4_4:+21111114 | Msa0674070:CDS |
| TGTTGAGATTAAAAGACTAA+AGG | 0.497601 | 4_4:+21110845 | Msa0674070:CDS |
| TCTTTGATAGAAAATATTAG+TGG | 0.498259 | 4_4:+21111092 | Msa0674070:CDS |
| ACAAAGGACAGCCTGCAGTT+AGG | 0.506012 | 4_4:+21107041 | Msa0674070:CDS |
| AACTTGATATCATATCTGAC+AGG | 0.508029 | 4_4:+21108458 | Msa0674070:CDS |
| CTGGTTATTGGAGATCAGCT+TGG | 0.508699 | 4_4:+21107071 | Msa0674070:CDS |
| GAAAATGTGAATATCTGGGC+TGG | 0.511314 | 4_4:+21108512 | Msa0674070:CDS |
| TCTTTCTTTCTTTATTAAGG+GGG | 0.517692 | 4_4:-21106837 | None:intergenic |
| AGGTGTGGAAGTGGCAGAGA+GGG | 0.526707 | 4_4:+21108412 | Msa0674070:intron |
| CCCAAATGAACTAAGAAGCA+TGG | 0.542573 | 4_4:+21111010 | Msa0674070:CDS |
| TTGCTGGATTAAGTGTGTTG+GGG | 0.546286 | 4_4:+21111186 | Msa0674070:CDS |
| AAGGCATTGCTAACACCAAA+GGG | 0.547881 | 4_4:+21110465 | Msa0674070:CDS |
| TATCTAGTTGCCATCGGACA+AGG | 0.552486 | 4_4:+21109198 | Msa0674070:CDS |
| GCAGGAGGTATGTCAAATCC+AGG | 0.552568 | 4_4:-21110651 | None:intergenic |
| TGAAGCATTGTGATACCTGA+GGG | 0.553587 | 4_4:-21110768 | None:intergenic |
| TCCAATGAGTATATGGTGGT+TGG | 0.556157 | 4_4:+21110911 | Msa0674070:CDS |
| AGAGACATAGCAATCAATCA+AGG | 0.558410 | 4_4:+21106861 | Msa0674070:five_prime_UTR |
| TCTATAACTGGAAAACCCTC+AGG | 0.558530 | 4_4:+21110753 | Msa0674070:CDS |
| ATGCTTCAAAGAATTGGCAC+TGG | 0.559271 | 4_4:+21110783 | Msa0674070:CDS |
| AACTTGTAGCTTTAGCGAGG+TGG | 0.563636 | 4_4:+21110503 | Msa0674070:CDS |
| GCCCCGAAAGCTTGAACACA+AGG | 0.567096 | 4_4:-21109231 | None:intergenic |
| CCAGTTATAGATCTTGCTAG+TGG | 0.572059 | 4_4:-21110741 | None:intergenic |
| TGCTGAAAATGTGAATATCT+GGG | 0.575036 | 4_4:+21108508 | Msa0674070:CDS |
| GGTGTTGCAAGCTTTCTAAG+TGG | 0.575161 | 4_4:+21111059 | Msa0674070:CDS |
| GCGAAATAACTTATCAACAA+CGG | 0.576311 | 4_4:+21109542 | Msa0674070:CDS |
| GAGAACAAAATGTGAGGGAA+GGG | 0.576360 | 4_4:-21109140 | None:intergenic |
| CAAGGCATTGCTAACACCAA+AGG | 0.579415 | 4_4:+21110464 | Msa0674070:CDS |
| CCAAATGAACTAAGAAGCAT+GGG | 0.579849 | 4_4:+21111011 | Msa0674070:CDS |
| TATCATATTATGGAATTCAA+GGG | 0.587902 | 4_4:+21108435 | Msa0674070:CDS |
| TTTATGTCCACCTTGTCCGA+TGG | 0.589781 | 4_4:-21109208 | None:intergenic |
| CATTGGTAGCTTCCTCAACA+AGG | 0.590057 | 4_4:+21110446 | Msa0674070:intron |
| GGAGAACAAAATGTGAGGGA+AGG | 0.590901 | 4_4:-21109141 | None:intergenic |
| TTGAAGCATTGTGATACCTG+AGG | 0.594873 | 4_4:-21110769 | None:intergenic |
| TTACATTCTTCACCAAGCAA+GGG | 0.595454 | 4_4:+21110604 | Msa0674070:CDS |
| TAGCGAGGTGGAAGAAGCAA+AGG | 0.597740 | 4_4:+21110515 | Msa0674070:CDS |
| ACCTTGTGTTCAAGCTTTCG+GGG | 0.599219 | 4_4:+21109230 | Msa0674070:CDS |
| TAGGTGTGGAAGTGGCAGAG+AGG | 0.601368 | 4_4:+21108411 | Msa0674070:intron |
| CCAGATTTGGACCTAACTGC+AGG | 0.604501 | 4_4:-21107052 | None:intergenic |
| GCGATGATCATTACAACACA+AGG | 0.605088 | 4_4:-21109408 | None:intergenic |
| AAGACAACAATTTCAAAATG+GGG | 0.607260 | 4_4:-21111406 | None:intergenic |
| CTGAGGAGAACAAAATGTGA+GGG | 0.608076 | 4_4:-21109145 | None:intergenic |
| TCACTCTATCTAGTTGCCAT+CGG | 0.608693 | 4_4:+21109192 | Msa0674070:CDS |
| CATAAAAGTGTCATCACACA+AGG | 0.610250 | 4_4:+21111251 | Msa0674070:CDS |
| AATAAGATTACTTGTGACTG+AGG | 0.611966 | 4_4:-21109162 | None:intergenic |
| CTAAAGGTAGCACAAGAGCA+TGG | 0.641511 | 4_4:+21110861 | Msa0674070:CDS |
| TGAAACTTGTAGCTTTAGCG+AGG | 0.646353 | 4_4:+21110500 | Msa0674070:CDS |
| ATCGTTTGAAGAGACGCAGG+AGG | 0.651425 | 4_4:-21110666 | None:intergenic |
| TTTATCGTTTGAAGAGACGC+AGG | 0.652472 | 4_4:-21110669 | None:intergenic |
| CTAGTTGCCATCGGACAAGG+TGG | 0.660681 | 4_4:+21109201 | Msa0674070:CDS |
| GATGGAGTCGTTGACTACAA+AGG | 0.676824 | 4_4:+21107025 | Msa0674070:CDS |
| GTGTTAGCAATGCCTTGTTG+AGG | 0.678778 | 4_4:-21110458 | None:intergenic |
| CGATGATCATTACAACACAA+GGG | 0.690961 | 4_4:-21109407 | None:intergenic |
| GATTTGGAAGAAGAATGTGA+TGG | 0.693639 | 4_4:+21109564 | Msa0674070:CDS |
| ACTTGATATCATATCTGACA+GGG | 0.694680 | 4_4:+21108459 | Msa0674070:CDS |
| TTGTGTTCAAGCTTTCGGGG+CGG | 0.695110 | 4_4:+21109233 | Msa0674070:CDS |
| CTGTTCCAATGAGTATATGG+TGG | 0.715883 | 4_4:+21110907 | Msa0674070:CDS |
| ACTGAGGAGAACAAAATGTG+AGG | 0.733234 | 4_4:-21109146 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTTTAAA+TGG | + | chr4_4:21108353-21108372 | Msa0674070:intron | 0.0% |
| !!! | TTTTTTTTAAACTAATCTAA+TGG | + | chr4_4:21107215-21107234 | Msa0674070:intron | 10.0% |
| !!! | TTTTTTTATTAATAATTGTG+TGG | + | chr4_4:21107499-21107518 | Msa0674070:intron | 10.0% |
| !!! | TTATTATTATTTATCTCTTT+TGG | + | chr4_4:21107580-21107599 | Msa0674070:intron | 10.0% |
| !!! | TATTATTATTTATCTCTTTT+GGG | + | chr4_4:21107581-21107600 | Msa0674070:intron | 10.0% |
| !! | TAGCTAAATATATATTATTA+GGG | + | chr4_4:21107709-21107728 | Msa0674070:intron | 10.0% |
| !!! | TTTGTTTTTATCATTAATAA+AGG | + | chr4_4:21107954-21107973 | Msa0674070:intron | 10.0% |
| !!! | AATTTTTCTATCTATATTTA+CGG | + | chr4_4:21110806-21110825 | Msa0674070:CDS | 10.0% |
| !! | TGTTAATATCAAATAATATA+TGG | + | chr4_4:21111336-21111355 | Msa0674070:three_prime_UTR | 10.0% |
| !! | GTTAATATCAAATAATATAT+GGG | + | chr4_4:21111337-21111356 | Msa0674070:three_prime_UTR | 10.0% |
| !! | TTTCTTTCTTTCTTTATTAA+GGG | - | chr4_4:21106842-21106861 | None:intergenic | 15.0% |
| !!! | TTCTATCTTTATTTAACTTT+CGG | - | chr4_4:21107657-21107676 | None:intergenic | 15.0% |
| !! | AGTTTACTTAAAATAAAACT+TGG | + | chr4_4:21107684-21107703 | Msa0674070:intron | 15.0% |
| !! | GTTTACTTAAAATAAAACTT+GGG | + | chr4_4:21107685-21107704 | Msa0674070:intron | 15.0% |
| !! | TTTACTTAAAATAAAACTTG+GGG | + | chr4_4:21107686-21107705 | Msa0674070:intron | 15.0% |
| !! | GTAGCTAAATATATATTATT+AGG | + | chr4_4:21107708-21107727 | Msa0674070:intron | 15.0% |
| !! | AGCTAAATATATATTATTAG+GGG | + | chr4_4:21107710-21107729 | Msa0674070:intron | 15.0% |
| !!! | ATTATTTTTTTTGAGTTAGT+AGG | - | chr4_4:21107756-21107775 | None:intergenic | 15.0% |
| !!! | TTTTTATCATTAATAAAGGT+TGG | + | chr4_4:21107958-21107977 | Msa0674070:intron | 15.0% |
| !! | AAAGAGATATAAAATTGATT+TGG | - | chr4_4:21108121-21108140 | None:intergenic | 15.0% |
| !!! | ATAAGCTAATTAAAGTTTTT+TGG | + | chr4_4:21108885-21108904 | Msa0674070:intron | 15.0% |
| !! | TCATATATCAAAATAATGAA+AGG | - | chr4_4:21108975-21108994 | None:intergenic | 15.0% |
| !!! | ATGTAGTTATTTCTTTTAAA+TGG | + | chr4_4:21110039-21110058 | Msa0674070:intron | 15.0% |
| !!! | CTTTCAATGTTTTAATTTAT+TGG | - | chr4_4:21110392-21110411 | None:intergenic | 15.0% |
| !! | ATTAAAACATTGAAAGATTA+TGG | + | chr4_4:21110396-21110415 | Msa0674070:intron | 15.0% |
| !! | TTCTTTCTTTCTTTATTAAG+GGG | - | chr4_4:21106841-21106860 | None:intergenic | 20.0% |
| !! | CTTTCTTTCTTTCTTTATTA+AGG | - | chr4_4:21106843-21106862 | None:intergenic | 20.0% |
| !! | AAAGAAGTGAATTATTCAAT+AGG | + | chr4_4:21106946-21106965 | Msa0674070:five_prime_UTR | 20.0% |
| !! | CTCTATTATATTGACAATAA+AGG | + | chr4_4:21107120-21107139 | Msa0674070:intron | 20.0% |
| !! | ATTATATTGACAATAAAGGT+TGG | + | chr4_4:21107124-21107143 | Msa0674070:intron | 20.0% |
| !! | ATAAAAAAAACAAGGTTAAG+TGG | - | chr4_4:21107488-21107507 | None:intergenic | 20.0% |
| !!! | TTTTATTAATAATTGTGTGG+TGG | + | chr4_4:21107502-21107521 | Msa0674070:intron | 20.0% |
| !! | TTTATTAATAATTGTGTGGT+GGG | + | chr4_4:21107503-21107522 | Msa0674070:intron | 20.0% |
| !! | ACAAAAAGTTTAATTGAGTT+GGG | - | chr4_4:21107896-21107915 | None:intergenic | 20.0% |
| !! | AACAAAAAGTTTAATTGAGT+TGG | - | chr4_4:21107897-21107916 | None:intergenic | 20.0% |
| !! | AAACAAAACAGAAAATTTCA+AGG | - | chr4_4:21107941-21107960 | None:intergenic | 20.0% |
| !!! | AGGAATAATAGAGTTTTTTT+TGG | - | chr4_4:21108077-21108096 | None:intergenic | 20.0% |
| !!! | GAATTATGAATGTTTTGTTT+AGG | + | chr4_4:21108392-21108411 | Msa0674070:intron | 20.0% |
| !! | TATCATATTATGGAATTCAA+GGG | + | chr4_4:21108435-21108454 | Msa0674070:CDS | 20.0% |
| !!! | TTTTGTCTCTTCAATTTTTA+CGG | + | chr4_4:21108669-21108688 | Msa0674070:intron | 20.0% |
| !!! | AAAACTTTAATTAGCTTATC+AGG | - | chr4_4:21108884-21108903 | None:intergenic | 20.0% |
| !! | ATATACAAGATAACATTAGT+TGG | + | chr4_4:21109367-21109386 | Msa0674070:CDS | 20.0% |
| !! | TATACAAGATAACATTAGTT+GGG | + | chr4_4:21109368-21109387 | Msa0674070:CDS | 20.0% |
| !!! | GATCAAATTCATTGATTATA+TGG | - | chr4_4:21109909-21109928 | None:intergenic | 20.0% |
| !! | TGTTATGATCACTATATAAA+AGG | - | chr4_4:21110336-21110355 | None:intergenic | 20.0% |
| !! | TCTTTGATAGAAAATATTAG+TGG | + | chr4_4:21111092-21111111 | Msa0674070:CDS | 20.0% |
| !!! | GTTTTGTGATAATATCAATA+AGG | + | chr4_4:21111136-21111155 | Msa0674070:CDS | 20.0% |
| !!! | CACATCTTGATTATTTTTAT+TGG | + | chr4_4:21111159-21111178 | Msa0674070:CDS | 20.0% |
| !! | AAATAATATATGGGATTGAA+TGG | + | chr4_4:21111346-21111365 | Msa0674070:three_prime_UTR | 20.0% |
| !! | AAAGACAACAATTTCAAAAT+GGG | - | chr4_4:21111410-21111429 | None:intergenic | 20.0% |
| !!! | ATACTTTTACCTATGAAAAA+AGG | + | chr4_4:21111431-21111450 | Msa0674070:three_prime_UTR | 20.0% |
| !!! | AATAAATGTCCTTTTTTCAT+AGG | - | chr4_4:21111443-21111462 | None:intergenic | 20.0% |
| ! | TCTTTCTTTCTTTATTAAGG+GGG | - | chr4_4:21106840-21106859 | None:intergenic | 25.0% |
| !! | TATTCAATAGGTTTGTTTGA+TGG | + | chr4_4:21106958-21106977 | Msa0674070:exon | 25.0% |
| ! | TTAAACTAATCTAATGGAGT+AGG | + | chr4_4:21107221-21107240 | Msa0674070:intron | 25.0% |
| !!! | TTCTTTTGTTGTAGCTTTTT+TGG | - | chr4_4:21107389-21107408 | None:intergenic | 25.0% |
| ! | CAGTAAAACAATACAAAAGT+GGG | - | chr4_4:21107542-21107561 | None:intergenic | 25.0% |
| ! | ACAGTAAAACAATACAAAAG+TGG | - | chr4_4:21107543-21107562 | None:intergenic | 25.0% |
| ! | ATTATTTAATCGTGTCGTAT+AGG | - | chr4_4:21107623-21107642 | None:intergenic | 25.0% |
| ! | ACTATTTGAACCTTGAAATT+TGG | + | chr4_4:21107862-21107881 | Msa0674070:intron | 25.0% |
| ! | TAAAATAGTTTAGCTAGGTT+GGG | - | chr4_4:21108054-21108073 | None:intergenic | 25.0% |
| ! | TTTGGTAAAATAGTTTAGCT+AGG | - | chr4_4:21108059-21108078 | None:intergenic | 25.0% |
| !!! | GAGATATAAAATTGATTTGG+TGG | - | chr4_4:21108118-21108137 | None:intergenic | 25.0% |
| !!! | GAACTCACATATTTTAAATG+TGG | + | chr4_4:21108191-21108210 | Msa0674070:intron | 25.0% |
| ! | GTATCATATTATGGAATTCA+AGG | + | chr4_4:21108434-21108453 | Msa0674070:CDS | 25.0% |
| !!! | TTTTTTGCTGATTCTTTTCT+TGG | + | chr4_4:21108566-21108585 | Msa0674070:CDS | 25.0% |
| !! | ATTAGTTTCCCTTTATTCTA+TGG | + | chr4_4:21108819-21108838 | Msa0674070:intron | 25.0% |
| ! | GACATATAGGTTTAACATTA+AGG | + | chr4_4:21109458-21109477 | Msa0674070:CDS | 25.0% |
| ! | ACAAGACCAATTCTAATAAA+GGG | - | chr4_4:21109498-21109517 | None:intergenic | 25.0% |
| ! | TACAAGACCAATTCTAATAA+AGG | - | chr4_4:21109499-21109518 | None:intergenic | 25.0% |
| ! | TGAGTAAACACTTAAAGATT+TGG | - | chr4_4:21109969-21109988 | None:intergenic | 25.0% |
| ! | TTCAGAGAAGAATAAATACT+AGG | - | chr4_4:21110005-21110024 | None:intergenic | 25.0% |
| ! | AATAACAATAGTGTGTTTAG+CGG | - | chr4_4:21110098-21110117 | None:intergenic | 25.0% |
| ! | CTACAATTATCGTACATTAA+TGG | + | chr4_4:21110205-21110224 | Msa0674070:intron | 25.0% |
| ! | TGAGAGAAAGATTGATTATT+TGG | + | chr4_4:21110267-21110286 | Msa0674070:intron | 25.0% |
| ! | AATTTGATTACAATGAGTGT+TGG | + | chr4_4:21110307-21110326 | Msa0674070:intron | 25.0% |
| !! | TTATTGGAATTAGTTTGAGT+TGG | - | chr4_4:21110376-21110395 | None:intergenic | 25.0% |
| !! | TACTAAGATTGATTCCAATT+TGG | + | chr4_4:21110541-21110560 | Msa0674070:CDS | 25.0% |
| !! | ACTAAGATTGATTCCAATTT+GGG | + | chr4_4:21110542-21110561 | Msa0674070:CDS | 25.0% |
| !! | TAGTCTTTTAATCTCAACAA+AGG | - | chr4_4:21110844-21110863 | None:intergenic | 25.0% |
| ! | TGTTGAGATTAAAAGACTAA+AGG | + | chr4_4:21110845-21110864 | Msa0674070:CDS | 25.0% |
| !! | TCAAGAATTTTTCTATGATC+AGG | + | chr4_4:21110986-21111005 | Msa0674070:CDS | 25.0% |
| ! | ACCTACAATTTAACCTTAAT+CGG | - | chr4_4:21111284-21111303 | None:intergenic | 25.0% |
| ! | AAGACAACAATTTCAAAATG+GGG | - | chr4_4:21111409-21111428 | None:intergenic | 25.0% |
| ! | GAAAGACAACAATTTCAAAA+TGG | - | chr4_4:21111411-21111430 | None:intergenic | 25.0% |
| ! | GAAAAAAGGACATTTATTGA+CGG | + | chr4_4:21111445-21111464 | Msa0674070:three_prime_UTR | 25.0% |
| AGCTTCTAACAAAACTTCAT+TGG | - | chr4_4:21106990-21107009 | None:intergenic | 30.0% | |
| AAGCTAGCGATAATTCTATA+AGG | + | chr4_4:21107177-21107196 | Msa0674070:intron | 30.0% | |
| TACACTTGATTCAACAAGAA+CGG | + | chr4_4:21107295-21107314 | Msa0674070:intron | 30.0% | |
| ! | TAGTTTATTGCCGCATTTTT+CGG | - | chr4_4:21107327-21107346 | None:intergenic | 30.0% |
| !!! | CTATTCTAATGTGGCTTTTT+TGG | - | chr4_4:21107357-21107376 | None:intergenic | 30.0% |
| AAAAAGCCACATTAGAATAG+CGG | + | chr4_4:21107357-21107376 | Msa0674070:intron | 30.0% | |
| TAATAGTAGCTATTTATGCG+TGG | + | chr4_4:21107417-21107436 | Msa0674070:intron | 30.0% | |
| AATAGTAGCTATTTATGCGT+GGG | + | chr4_4:21107418-21107437 | Msa0674070:intron | 30.0% | |
| !!! | TAATTTTTTTTGGGGTAGCA+AGG | + | chr4_4:21107772-21107791 | Msa0674070:intron | 30.0% |
| !!! | AATTTTTTTTGGGGTAGCAA+GGG | + | chr4_4:21107773-21107792 | Msa0674070:intron | 30.0% |
| !! | GGTTTTATGACCAAATTTCA+AGG | - | chr4_4:21107875-21107894 | None:intergenic | 30.0% |
| GTAAAATAGTTTAGCTAGGT+TGG | - | chr4_4:21108055-21108074 | None:intergenic | 30.0% | |
| !! | ATAAAATTGATTTGGTGGCT+AGG | - | chr4_4:21108113-21108132 | None:intergenic | 30.0% |
| GACATTGCATAATATATGCA+GGG | - | chr4_4:21108239-21108258 | None:intergenic | 30.0% | |
| AGACATTGCATAATATATGC+AGG | - | chr4_4:21108240-21108259 | None:intergenic | 30.0% | |
| ! | ATAAATTTTACCAGTGTGTC+AGG | - | chr4_4:21108325-21108344 | None:intergenic | 30.0% |
| !!! | ATGAATGTTTTGTTTAGGTG+TGG | + | chr4_4:21108397-21108416 | Msa0674070:intron | 30.0% |
| AACTTGATATCATATCTGAC+AGG | + | chr4_4:21108458-21108477 | Msa0674070:CDS | 30.0% | |
| ACTTGATATCATATCTGACA+GGG | + | chr4_4:21108459-21108478 | Msa0674070:CDS | 30.0% | |
| TGCTGAAAATGTGAATATCT+GGG | + | chr4_4:21108508-21108527 | Msa0674070:CDS | 30.0% | |
| TGCTTCTCTTATCTATATCT+TGG | + | chr4_4:21108610-21108629 | Msa0674070:CDS | 30.0% | |
| AAACAGAGCCATAGAATAAA+GGG | - | chr4_4:21108830-21108849 | None:intergenic | 30.0% | |
| AGATTAGCATAAACCATGAA+AGG | - | chr4_4:21108945-21108964 | None:intergenic | 30.0% | |
| ! | ATTGGCTTAATACAATTTCC+AGG | + | chr4_4:21109086-21109105 | Msa0674070:intron | 30.0% |
| TTGGCTTAATACAATTTCCA+GGG | + | chr4_4:21109087-21109106 | Msa0674070:intron | 30.0% | |
| AATAAGATTACTTGTGACTG+AGG | - | chr4_4:21109165-21109184 | None:intergenic | 30.0% | |
| CTAGAAGCTCATTCTTTAAT+TGG | + | chr4_4:21109292-21109311 | Msa0674070:CDS | 30.0% | |
| ! | TGGTATTTTACTATGATTGC+AGG | + | chr4_4:21109315-21109334 | Msa0674070:CDS | 30.0% |
| !!! | GCTTTGATTGTTTTTTTGCT+CGG | + | chr4_4:21109429-21109448 | Msa0674070:CDS | 30.0% |
| AAGAGTCCCTTTATTAGAAT+TGG | + | chr4_4:21109489-21109508 | Msa0674070:CDS | 30.0% | |
| TTGTTGCAGCTATAAGAAAT+TGG | + | chr4_4:21109520-21109539 | Msa0674070:CDS | 30.0% | |
| GCGAAATAACTTATCAACAA+CGG | + | chr4_4:21109542-21109561 | Msa0674070:CDS | 30.0% | |
| ! | TAACTTATCAACAACGGATT+TGG | + | chr4_4:21109548-21109567 | Msa0674070:CDS | 30.0% |
| TTCCACAAGGATAAAATCAT+TGG | + | chr4_4:21109876-21109895 | Msa0674070:intron | 30.0% | |
| ! | AACCAATGATTTTATCCTTG+TGG | - | chr4_4:21109881-21109900 | None:intergenic | 30.0% |
| ! | CTTAAAGATTTGGAACTAGT+TGG | - | chr4_4:21109959-21109978 | None:intergenic | 30.0% |
| CCACTGTGATTAAATAAGAA+GGG | - | chr4_4:21110148-21110167 | None:intergenic | 30.0% | |
| ACCACTGTGATTAAATAAGA+AGG | - | chr4_4:21110149-21110168 | None:intergenic | 30.0% | |
| ATCACAATGCTTCAAAGAAT+TGG | + | chr4_4:21110777-21110796 | Msa0674070:CDS | 30.0% | |
| !! | GTTCCTCAATACTTTTTGTT+TGG | + | chr4_4:21110933-21110952 | Msa0674070:CDS | 30.0% |
| !! | ACTCCAAACAAAAAGTATTG+AGG | - | chr4_4:21110939-21110958 | None:intergenic | 30.0% |
| !!! | AGTTTCTGAGGTTTTTACTA+TGG | + | chr4_4:21110956-21110975 | Msa0674070:CDS | 30.0% |
| GAAAATATTAGTGGCAAAGA+TGG | + | chr4_4:21111101-21111120 | Msa0674070:CDS | 30.0% | |
| !! | TATTTTTATTGGCTACTTGC+TGG | + | chr4_4:21111170-21111189 | Msa0674070:CDS | 30.0% |
| ACCGATTAAGGTTAAATTGT+AGG | + | chr4_4:21111280-21111299 | Msa0674070:intron | 30.0% | |
| GCATGAAAATGCTCTATATT+TGG | + | chr4_4:21111368-21111387 | Msa0674070:three_prime_UTR | 30.0% | |
| AGAGACATAGCAATCAATCA+AGG | + | chr4_4:21106861-21106880 | Msa0674070:five_prime_UTR | 35.0% | |
| TTAGGTCCAAATCTGGTTAT+TGG | + | chr4_4:21107059-21107078 | Msa0674070:CDS | 35.0% | |
| TGATCTCCAATAACCAGATT+TGG | - | chr4_4:21107068-21107087 | None:intergenic | 35.0% | |
| AGATCAGCTTGGTTTATCAT+AGG | + | chr4_4:21107082-21107101 | Msa0674070:CDS | 35.0% | |
| CTAGCGATAATTCTATAAGG+TGG | + | chr4_4:21107180-21107199 | Msa0674070:intron | 35.0% | |
| ! | ACGGATTATACCGAAAAATG+CGG | + | chr4_4:21107314-21107333 | Msa0674070:intron | 35.0% |
| TACAATCCGCTATTCTAATG+TGG | - | chr4_4:21107366-21107385 | None:intergenic | 35.0% | |
| ATAGTAGCTATTTATGCGTG+GGG | + | chr4_4:21107419-21107438 | Msa0674070:intron | 35.0% | |
| !! | AGGTTGGTTTCAAAAAGAGT+TGG | + | chr4_4:21107974-21107993 | Msa0674070:intron | 35.0% |
| ! | CTCTTTGAACCTTGTAGTTT+TGG | + | chr4_4:21108003-21108022 | Msa0674070:intron | 35.0% |
| ACAGTCAAACCAAAACTACA+AGG | - | chr4_4:21108015-21108034 | None:intergenic | 35.0% | |
| ATAATGGTCAAGTAGTCTAG+TGG | + | chr4_4:21108165-21108184 | Msa0674070:intron | 35.0% | |
| CATAATATATGCAGGGTATG+GGG | - | chr4_4:21108232-21108251 | None:intergenic | 35.0% | |
| GCATAATATATGCAGGGTAT+GGG | - | chr4_4:21108233-21108252 | None:intergenic | 35.0% | |
| TGCATAATATATGCAGGGTA+TGG | - | chr4_4:21108234-21108253 | None:intergenic | 35.0% | |
| CTGCTGAAAATGTGAATATC+TGG | + | chr4_4:21108507-21108526 | Msa0674070:CDS | 35.0% | |
| !! | GCAAAAAAAGCACCAAAGAT+AGG | - | chr4_4:21108554-21108573 | None:intergenic | 35.0% |
| GACGATGATGAATATGATGA+TGG | - | chr4_4:21108757-21108776 | None:intergenic | 35.0% | |
| CAAACAGAGCCATAGAATAA+AGG | - | chr4_4:21108831-21108850 | None:intergenic | 35.0% | |
| ! | CTTTATTCTATGGCTCTGTT+TGG | + | chr4_4:21108829-21108848 | Msa0674070:intron | 35.0% |
| TAGAATATGTAGGCTCAGTT+TGG | - | chr4_4:21108916-21108935 | None:intergenic | 35.0% | |
| AAGGCAGTGTTAGAATATGT+AGG | - | chr4_4:21108926-21108945 | None:intergenic | 35.0% | |
| TATTCTAACACTGCCTTTCA+TGG | + | chr4_4:21108929-21108948 | Msa0674070:intron | 35.0% | |
| GAATAGACAGATAGCTATGT+CGG | + | chr4_4:21109043-21109062 | Msa0674070:intron | 35.0% | |
| !!! | CATGTTTTGATGTTGGTCAT+TGG | + | chr4_4:21109068-21109087 | Msa0674070:intron | 35.0% |
| TAATACAATTTCCAGGGACT+AGG | + | chr4_4:21109093-21109112 | Msa0674070:intron | 35.0% | |
| AAACCTTGTGTTCAAGCTTT+CGG | + | chr4_4:21109228-21109247 | Msa0674070:CDS | 35.0% | |
| GAAGCTCATTCTTTAATTGG+TGG | + | chr4_4:21109295-21109314 | Msa0674070:CDS | 35.0% | |
| GATAACATTAGTTGGGTTCT+TGG | + | chr4_4:21109375-21109394 | Msa0674070:CDS | 35.0% | |
| ATTAGTTGGGTTCTTGGATT+TGG | + | chr4_4:21109381-21109400 | Msa0674070:CDS | 35.0% | |
| CGATGATCATTACAACACAA+GGG | - | chr4_4:21109410-21109429 | None:intergenic | 35.0% | |
| !!! | TTGTTTTTTTGCTCGGAACA+AGG | + | chr4_4:21109436-21109455 | Msa0674070:CDS | 35.0% |
| GATTTGGAAGAAGAATGTGA+TGG | + | chr4_4:21109564-21109583 | Msa0674070:CDS | 35.0% | |
| ACAAGCTCAAGATTCTATCA+TGG | - | chr4_4:21109847-21109866 | None:intergenic | 35.0% | |
| TTGTGATACTACATTCCACA+AGG | + | chr4_4:21109863-21109882 | Msa0674070:intron | 35.0% | |
| ! | CCCTTCTTATTTAATCACAG+TGG | + | chr4_4:21110145-21110164 | Msa0674070:intron | 35.0% |
| GTACATTAATGGTTCATGCT+AGG | + | chr4_4:21110216-21110235 | Msa0674070:intron | 35.0% | |
| !! | TTAGCTTGTAACTTCTGCAT+TGG | + | chr4_4:21110429-21110448 | Msa0674070:intron | 35.0% |
| GCTACAAGTTTCATCTTCTT+TGG | - | chr4_4:21110493-21110512 | None:intergenic | 35.0% | |
| ACTAAAGTTGTAGCCCAAAT+TGG | - | chr4_4:21110558-21110577 | None:intergenic | 35.0% | |
| ! | TGGGCTACAACTTTAGTTTA+TGG | + | chr4_4:21110561-21110580 | Msa0674070:CDS | 35.0% |
| TTTACATTCTTCACCAAGCA+AGG | + | chr4_4:21110603-21110622 | Msa0674070:CDS | 35.0% | |
| TTACATTCTTCACCAAGCAA+GGG | + | chr4_4:21110604-21110623 | Msa0674070:CDS | 35.0% | |
| ATGGAGAGAACAATATTTCC+TGG | + | chr4_4:21110633-21110652 | Msa0674070:CDS | 35.0% | |
| CGTTATCTACGATTGCATAT+TGG | + | chr4_4:21110716-21110735 | Msa0674070:CDS | 35.0% | |
| CAACTGTTCCAATGAGTATA+TGG | + | chr4_4:21110904-21110923 | Msa0674070:CDS | 35.0% | |
| !! | CTTTTTGTTTGGAGTTTCTG+AGG | + | chr4_4:21110944-21110963 | Msa0674070:CDS | 35.0% |
| !! | TCTGAGGTTTTTACTATGGT+TGG | + | chr4_4:21110960-21110979 | Msa0674070:CDS | 35.0% |
| CCATGCTTCTTAGTTCATTT+GGG | - | chr4_4:21111013-21111032 | None:intergenic | 35.0% | |
| ! | CCAAATGAACTAAGAAGCAT+GGG | + | chr4_4:21111011-21111030 | Msa0674070:CDS | 35.0% |
| ! | GCACTCTATTTGAGTATTGT+TGG | + | chr4_4:21111038-21111057 | Msa0674070:CDS | 35.0% |
| !! | CATAAAAGTGTCATCACACA+AGG | + | chr4_4:21111251-21111270 | Msa0674070:CDS | 35.0% |
| !! | GGACATTTATTGACGGATTA+TGG | + | chr4_4:21111452-21111471 | Msa0674070:three_prime_UTR | 35.0% |
| CACAACACAACACACAACAT+GGG | - | chr4_4:21107447-21107466 | None:intergenic | 40.0% | |
| TCACAACACAACACACAACA+TGG | - | chr4_4:21107448-21107467 | None:intergenic | 40.0% | |
| !! | AATAATTGTGTGGTGGGTTG+TGG | + | chr4_4:21107509-21107528 | Msa0674070:intron | 40.0% |
| !! | ATAATTGTGTGGTGGGTTGT+GGG | + | chr4_4:21107510-21107529 | Msa0674070:intron | 40.0% |
| !! | AGTTTAGCTAGGTTGGGTTT+TGG | - | chr4_4:21108048-21108067 | None:intergenic | 40.0% |
| GGCTAGGATGAGAAAGTTTA+AGG | - | chr4_4:21108097-21108116 | None:intergenic | 40.0% | |
| !!! | GTTTTGTTTAGGTGTGGAAG+TGG | + | chr4_4:21108403-21108422 | Msa0674070:intron | 40.0% |
| !! | GCAGAGAGGGTATCATATTA+TGG | + | chr4_4:21108425-21108444 | Msa0674070:CDS | 40.0% |
| GAAAATGTGAATATCTGGGC+TGG | + | chr4_4:21108512-21108531 | Msa0674070:CDS | 40.0% | |
| GCTTCTCTACTTCCTATCTT+TGG | + | chr4_4:21108539-21108558 | Msa0674070:CDS | 40.0% | |
| ! | TAGCGTCTTCACACACATTT+TGG | + | chr4_4:21108716-21108735 | Msa0674070:intron | 40.0% |
| GATCTTGTGCTGAGAGAATA+CGG | - | chr4_4:21108795-21108814 | None:intergenic | 40.0% | |
| GAGAACAAAATGTGAGGGAA+GGG | - | chr4_4:21109143-21109162 | None:intergenic | 40.0% | |
| CTGAGGAGAACAAAATGTGA+GGG | - | chr4_4:21109148-21109167 | None:intergenic | 40.0% | |
| ACTGAGGAGAACAAAATGTG+AGG | - | chr4_4:21109149-21109168 | None:intergenic | 40.0% | |
| TCACTCTATCTAGTTGCCAT+CGG | + | chr4_4:21109192-21109211 | Msa0674070:CDS | 40.0% | |
| AACCTTGTGTTCAAGCTTTC+GGG | + | chr4_4:21109229-21109248 | Msa0674070:CDS | 40.0% | |
| GCGATGATCATTACAACACA+AGG | - | chr4_4:21109411-21109430 | None:intergenic | 40.0% | |
| GCTCAAGATTCTATCATGGT+GGG | - | chr4_4:21109843-21109862 | None:intergenic | 40.0% | |
| AGCTCAAGATTCTATCATGG+TGG | - | chr4_4:21109844-21109863 | None:intergenic | 40.0% | |
| AAGAAGGGAGTTGAACTATC+TGG | - | chr4_4:21110133-21110152 | None:intergenic | 40.0% | |
| !! | AAGGCATTGCTAACACCAAA+GGG | + | chr4_4:21110465-21110484 | Msa0674070:CDS | 40.0% |
| TCATCTTCTTTGGATCCCTT+TGG | - | chr4_4:21110483-21110502 | None:intergenic | 40.0% | |
| !! | TGAAACTTGTAGCTTTAGCG+AGG | + | chr4_4:21110500-21110519 | Msa0674070:CDS | 40.0% |
| TTTATCGTTTGAAGAGACGC+AGG | - | chr4_4:21110672-21110691 | None:intergenic | 40.0% | |
| GCGTCTCTTCAAACGATAAA+CGG | + | chr4_4:21110672-21110691 | Msa0674070:CDS | 40.0% | |
| CCAGTTATAGATCTTGCTAG+TGG | - | chr4_4:21110744-21110763 | None:intergenic | 40.0% | |
| CCACTAGCAAGATCTATAAC+TGG | + | chr4_4:21110741-21110760 | Msa0674070:CDS | 40.0% | |
| TCTATAACTGGAAAACCCTC+AGG | + | chr4_4:21110753-21110772 | Msa0674070:CDS | 40.0% | |
| !! | TGAAGCATTGTGATACCTGA+GGG | - | chr4_4:21110771-21110790 | None:intergenic | 40.0% |
| !! | TTGAAGCATTGTGATACCTG+AGG | - | chr4_4:21110772-21110791 | None:intergenic | 40.0% |
| ATGCTTCAAAGAATTGGCAC+TGG | + | chr4_4:21110783-21110802 | Msa0674070:CDS | 40.0% | |
| CTCATTGGAACAGTTGCAAT+TGG | - | chr4_4:21110900-21110919 | None:intergenic | 40.0% | |
| CTGTTCCAATGAGTATATGG+TGG | + | chr4_4:21110907-21110926 | Msa0674070:CDS | 40.0% | |
| TCCAATGAGTATATGGTGGT+TGG | + | chr4_4:21110911-21110930 | Msa0674070:CDS | 40.0% | |
| ACCAACCACCATATACTCAT+TGG | - | chr4_4:21110915-21110934 | None:intergenic | 40.0% | |
| CCCAAATGAACTAAGAAGCA+TGG | + | chr4_4:21111010-21111029 | Msa0674070:CDS | 40.0% | |
| CCCATGCTTCTTAGTTCATT+TGG | - | chr4_4:21111014-21111033 | None:intergenic | 40.0% | |
| GCAAAGATGGACATGATAGT+TGG | + | chr4_4:21111114-21111133 | Msa0674070:CDS | 40.0% | |
| ! | ACTTGCTGGATTAAGTGTGT+TGG | + | chr4_4:21111184-21111203 | Msa0674070:CDS | 40.0% |
| CTTGCTGGATTAAGTGTGTT+GGG | + | chr4_4:21111185-21111204 | Msa0674070:CDS | 40.0% | |
| TTGCTGGATTAAGTGTGTTG+GGG | + | chr4_4:21111186-21111205 | Msa0674070:CDS | 40.0% | |
| ! | ACAAGGATAGTCACCGATTA+AGG | + | chr4_4:21111268-21111287 | Msa0674070:exon | 40.0% |
| ! | GCTCAGTTAGCTCTTGTTGA+TGG | + | chr4_4:21107007-21107026 | Msa0674070:CDS | 45.0% |
| ! | GATGGAGTCGTTGACTACAA+AGG | + | chr4_4:21107025-21107044 | Msa0674070:CDS | 45.0% |
| CTGGTTATTGGAGATCAGCT+TGG | + | chr4_4:21107071-21107090 | Msa0674070:CDS | 45.0% | |
| !! | AGGTTGGTTTGACAAAGAGC+TGG | + | chr4_4:21107140-21107159 | Msa0674070:intron | 45.0% |
| ! | CAAAGAGCTGGTCTATACAG+CGG | + | chr4_4:21107152-21107171 | Msa0674070:intron | 45.0% |
| CGAATGGTAGTATAAGGGAG+GGG | - | chr4_4:21107802-21107821 | None:intergenic | 45.0% | |
| GCGAATGGTAGTATAAGGGA+GGG | - | chr4_4:21107803-21107822 | None:intergenic | 45.0% | |
| AGGGGCGAATGGTAGTATAA+GGG | - | chr4_4:21107807-21107826 | None:intergenic | 45.0% | |
| TTATACTACCATTCGCCCCT+GGG | + | chr4_4:21107807-21107826 | Msa0674070:intron | 45.0% | |
| ACATGCAGTGTATAGACCCA+GGG | - | chr4_4:21107826-21107845 | None:intergenic | 45.0% | |
| TAAACCAACTCCTGACACAC+TGG | + | chr4_4:21108312-21108331 | Msa0674070:intron | 45.0% | |
| TTTACCAGTGTGTCAGGAGT+TGG | - | chr4_4:21108319-21108338 | None:intergenic | 45.0% | |
| GCTCTGTTTGGCAAAACTAG+CGG | + | chr4_4:21108841-21108860 | Msa0674070:intron | 45.0% | |
| TATGTAGGCTCAGTTTGGCA+AGG | - | chr4_4:21108911-21108930 | None:intergenic | 45.0% | |
| !!! | GTCGGCTCATGTTTTGATGT+TGG | + | chr4_4:21109061-21109080 | Msa0674070:intron | 45.0% |
| GGAGAACAAAATGTGAGGGA+AGG | - | chr4_4:21109144-21109163 | None:intergenic | 45.0% | |
| TATCTAGTTGCCATCGGACA+AGG | + | chr4_4:21109198-21109217 | Msa0674070:CDS | 45.0% | |
| TTTATGTCCACCTTGTCCGA+TGG | - | chr4_4:21109211-21109230 | None:intergenic | 45.0% | |
| ACCTTGTGTTCAAGCTTTCG+GGG | + | chr4_4:21109230-21109249 | Msa0674070:CDS | 45.0% | |
| !! | CTTCTAGCTCTGTGCTCTTT+AGG | - | chr4_4:21109279-21109298 | None:intergenic | 45.0% |
| TGCTCGGAACAAGGACATAT+AGG | + | chr4_4:21109445-21109464 | Msa0674070:CDS | 45.0% | |
| ! | CATTGGTAGCTTCCTCAACA+AGG | + | chr4_4:21110446-21110465 | Msa0674070:intron | 45.0% |
| ! | GTGTTAGCAATGCCTTGTTG+AGG | - | chr4_4:21110461-21110480 | None:intergenic | 45.0% |
| !! | CAAGGCATTGCTAACACCAA+AGG | + | chr4_4:21110464-21110483 | Msa0674070:CDS | 45.0% |
| !! | AACTTGTAGCTTTAGCGAGG+TGG | + | chr4_4:21110503-21110522 | Msa0674070:CDS | 45.0% |
| CTAAAGGTAGCACAAGAGCA+TGG | + | chr4_4:21110861-21110880 | Msa0674070:CDS | 45.0% | |
| ! | GGTGTTGCAAGCTTTCTAAG+TGG | + | chr4_4:21111059-21111078 | Msa0674070:CDS | 45.0% |
| !! | TTTAAAAAAAAAATTATATG+TGG | - | chr4_4:21107206-21107225 | None:intergenic | 5.0% |
| !! | AATTATTAATAAAAAAAACA+AGG | - | chr4_4:21107496-21107515 | None:intergenic | 5.0% |
| !!! | TCAAAAAAAATAATTTTTTT+TGG | + | chr4_4:21107762-21107781 | Msa0674070:intron | 5.0% |
| !!! | CAAAAAAAATAATTTTTTTT+GGG | + | chr4_4:21107763-21107782 | Msa0674070:intron | 5.0% |
| !!! | AAAAAAAATAATTTTTTTTG+GGG | + | chr4_4:21107764-21107783 | Msa0674070:intron | 5.0% |
| !! | ATTATAAAAATGAATTAATT+TGG | - | chr4_4:21108150-21108169 | None:intergenic | 5.0% |
| !!! | AAATTAATTCATTTTTATAA+TGG | + | chr4_4:21108149-21108168 | Msa0674070:intron | 5.0% |
| ACAAAGGACAGCCTGCAGTT+AGG | + | chr4_4:21107041-21107060 | Msa0674070:CDS | 50.0% | |
| CCAGATTTGGACCTAACTGC+AGG | - | chr4_4:21107055-21107074 | None:intergenic | 50.0% | |
| CCTGCAGTTAGGTCCAAATC+TGG | + | chr4_4:21107052-21107071 | Msa0674070:CDS | 50.0% | |
| GGCGAATGGTAGTATAAGGG+AGG | - | chr4_4:21107804-21107823 | None:intergenic | 50.0% | |
| CAGGGGCGAATGGTAGTATA+AGG | - | chr4_4:21107808-21107827 | None:intergenic | 50.0% | |
| CTTATACTACCATTCGCCCC+TGG | + | chr4_4:21107806-21107825 | Msa0674070:intron | 50.0% | |
| CATGCAGTGTATAGACCCAG+GGG | - | chr4_4:21107825-21107844 | None:intergenic | 50.0% | |
| CACATGCAGTGTATAGACCC+AGG | - | chr4_4:21107827-21107846 | None:intergenic | 50.0% | |
| TGGTCAAGTAGTCTAGTGGC+TGG | + | chr4_4:21108169-21108188 | Msa0674070:intron | 50.0% | |
| GTGTTAACAAGCCTAGTCCC+TGG | - | chr4_4:21109107-21109126 | None:intergenic | 50.0% | |
| TTGTGTTCAAGCTTTCGGGG+CGG | + | chr4_4:21109233-21109252 | Msa0674070:CDS | 50.0% | |
| TAGCGAGGTGGAAGAAGCAA+AGG | + | chr4_4:21110515-21110534 | Msa0674070:CDS | 50.0% | |
| CACCAAGCAAGGGAGTTCTA+TGG | + | chr4_4:21110614-21110633 | Msa0674070:CDS | 50.0% | |
| CTCCATAGAACTCCCTTGCT+TGG | - | chr4_4:21110619-21110638 | None:intergenic | 50.0% | |
| ! | GCAGGAGGTATGTCAAATCC+AGG | - | chr4_4:21110654-21110673 | None:intergenic | 50.0% |
| ATCGTTTGAAGAGACGCAGG+AGG | - | chr4_4:21110669-21110688 | None:intergenic | 50.0% | |
| !! | TGTGTGGTGGGTTGTGGGTA+TGG | + | chr4_4:21107515-21107534 | Msa0674070:intron | 55.0% |
| !! | GTGTGGTGGGTTGTGGGTAT+GGG | + | chr4_4:21107516-21107535 | Msa0674070:intron | 55.0% |
| TGTATAGACCCAGGGGCGAA+TGG | - | chr4_4:21107818-21107837 | None:intergenic | 55.0% | |
| TAGGTGTGGAAGTGGCAGAG+AGG | + | chr4_4:21108411-21108430 | Msa0674070:intron | 55.0% | |
| AGGTGTGGAAGTGGCAGAGA+GGG | + | chr4_4:21108412-21108431 | Msa0674070:intron | 55.0% | |
| GTTGCAGTGCTCTGCTTGAG+TGG | - | chr4_4:21108485-21108504 | None:intergenic | 55.0% | |
| CTAGTTGCCATCGGACAAGG+TGG | + | chr4_4:21109201-21109220 | Msa0674070:CDS | 55.0% | |
| GCCCCGAAAGCTTGAACACA+AGG | - | chr4_4:21109234-21109253 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 21106830 | 21111491 | 21106830 | ID=Msa0674070;Name=Msa0674070 |
| chr4_4 | mRNA | 21106830 | 21111491 | 21106830 | ID=Msa0674070-mRNA-1;Parent=Msa0674070;Name=Msa0674070-mRNA-1;_AED=0.04;_eAED=0.04;_QI=147|1|1|1|0.75|0.6|5|189|559 |
| chr4_4 | exon | 21106830 | 21107103 | 21106830 | ID=Msa0674070-mRNA-1:exon:6023;Parent=Msa0674070-mRNA-1 |
| chr4_4 | exon | 21108414 | 21108631 | 21108414 | ID=Msa0674070-mRNA-1:exon:6024;Parent=Msa0674070-mRNA-1 |
| chr4_4 | exon | 21109108 | 21109619 | 21109108 | ID=Msa0674070-mRNA-1:exon:6025;Parent=Msa0674070-mRNA-1 |
| chr4_4 | exon | 21110455 | 21111297 | 21110455 | ID=Msa0674070-mRNA-1:exon:6026;Parent=Msa0674070-mRNA-1 |
| chr4_4 | exon | 21111323 | 21111491 | 21111323 | ID=Msa0674070-mRNA-1:exon:6027;Parent=Msa0674070-mRNA-1 |
| chr4_4 | five_prime_UTR | 21106830 | 21106976 | 21106830 | ID=Msa0674070-mRNA-1:five_prime_utr;Parent=Msa0674070-mRNA-1 |
| chr4_4 | CDS | 21106977 | 21107103 | 21106977 | ID=Msa0674070-mRNA-1:cds;Parent=Msa0674070-mRNA-1 |
| chr4_4 | CDS | 21108414 | 21108631 | 21108414 | ID=Msa0674070-mRNA-1:cds;Parent=Msa0674070-mRNA-1 |
| chr4_4 | CDS | 21109108 | 21109619 | 21109108 | ID=Msa0674070-mRNA-1:cds;Parent=Msa0674070-mRNA-1 |
| chr4_4 | CDS | 21110455 | 21111277 | 21110455 | ID=Msa0674070-mRNA-1:cds;Parent=Msa0674070-mRNA-1 |
| chr4_4 | three_prime_UTR | 21111278 | 21111297 | 21111278 | ID=Msa0674070-mRNA-1:three_prime_utr;Parent=Msa0674070-mRNA-1 |
| chr4_4 | three_prime_UTR | 21111323 | 21111491 | 21111323 | ID=Msa0674070-mRNA-1:three_prime_utr;Parent=Msa0674070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
