AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1281780


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1281780 MtrunA17_Chr8g0352611 98.403 313 5 0 1 313 1 313 0.0 627
Msa1281780 MtrunA17_Chr8g0352621 75.796 314 74 2 1 313 1 313 2.24e-175 487
Msa1281780 MtrunA17_Chr3g0083901 71.656 314 88 1 1 313 1 314 5.24e-167 466
Msa1281780 MtrunA17_Chr3g0083921 69.108 314 96 1 1 313 1 314 3.20e-160 449
Msa1281780 MtrunA17_Chr8g0352591 67.628 312 89 2 1 311 1 301 2.52e-148 419
Msa1281780 MtrunA17_Chr8g0382281 51.429 315 151 2 1 313 1 315 6.32e-102 301
Msa1281780 MtrunA17_Chr2g0293441 45.687 313 169 1 1 312 1 313 3.95e-99 294
Msa1281780 MtrunA17_Chr5g0425971 47.756 312 161 2 1 310 1 312 5.38e-98 291
Msa1281780 MtrunA17_Chr8g0352571 41.139 316 181 2 1 311 1 316 1.35e-76 237
Msa1281780 MtrunA17_Chr8g0393281 37.143 315 196 2 1 313 1 315 3.01e-69 218
Msa1281780 MtrunA17_Chr1g0162071 37.778 315 192 4 1 312 1 314 1.36e-66 211
Msa1281780 MtrunA17_Chr6g0479411 37.821 312 192 2 1 310 28 339 2.76e-65 208
Msa1281780 MtrunA17_Chr6g0479421 37.500 312 193 2 1 310 1 312 4.76e-63 202
Msa1281780 MtrunA17_Chr1g0210981 34.936 312 201 2 1 310 1 312 9.67e-59 191
Msa1281780 MtrunA17_Chr6g0479391 35.570 298 191 1 14 310 15 312 8.51e-57 186
Msa1281780 MtrunA17_Chr8g0352581 36.278 317 176 7 13 311 4 312 1.13e-50 170
Msa1281780 MtrunA17_Chr3g0084011 67.123 73 24 0 1 73 1 73 8.32e-30 109
Msa1281780 MtrunA17_Chr6g0461141 26.667 315 214 7 8 311 2 310 1.94e-27 108
Msa1281780 MtrunA17_Chr3g0084021 66.176 68 23 0 143 210 5 72 5.73e-24 93.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1281780 AT5G12380.1 55.305 311 138 1 1 310 1 311 2.09e-124 358
Msa1281780 AT5G10230.1 52.244 312 147 2 1 310 1 312 7.52e-107 314
Msa1281780 AT1G35720.1 50.789 317 151 4 1 313 1 316 3.28e-106 313
Msa1281780 AT5G10220.1 50.955 314 150 3 1 310 1 314 4.90e-102 302
Msa1281780 AT5G65020.1 51.118 313 150 3 1 310 1 313 6.15e-102 301
Msa1281780 AT5G65020.2 50.694 288 140 2 25 310 11 298 5.33e-93 278
Msa1281780 AT2G38760.1 41.824 318 177 3 1 310 1 318 2.38e-79 244
Msa1281780 AT1G68090.1 35.783 313 198 3 1 310 1 313 7.06e-60 194
Msa1281780 AT2G38750.2 33.766 308 178 7 25 313 2 302 1.35e-43 151
Msa1281780 AT2G38750.1 33.766 308 178 7 25 313 19 319 1.57e-43 152
Msa1281780 AT1G68090.2 34.400 250 161 3 1 247 1 250 4.62e-42 146

Find 88 sgRNAs with CRISPR-Local

Find 254 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTCAGTTTGAGCCAATTT+TGG 0.184328 8_3:+21516810 None:intergenic
TATTTGTTAGATTAAGATTA+AGG 0.238364 8_3:-21515778 Msa1281780:three_prime_UTR
AATTTAATTCAGAATGTCTT+AGG 0.274980 8_3:+21515706 None:intergenic
GACTTAAAGTTGTGATGTTT+TGG 0.291418 8_3:-21515995 Msa1281780:three_prime_UTR
TGGGGCTAGTGACTGCATTT+AGG 0.296540 8_3:-21516854 Msa1281780:CDS
GAAAGTTCTCCTTCTCTTGA+TGG 0.304190 8_3:-21516043 Msa1281780:three_prime_UTR
GCACTCCTTGGAGGAAGATT+TGG 0.307016 8_3:-21517084 Msa1281780:CDS
TGATGAGATCAATCCAAAAT+TGG 0.309418 8_3:-21516823 Msa1281780:CDS
CGTAAGCACGTCTCACATTA+AGG 0.309809 8_3:+21517120 None:intergenic
CGTCAAATTTCAGAAGTATA+TGG 0.319961 8_3:-21515744 Msa1281780:three_prime_UTR
TGCGGAACGTGATGCTGTTT+TGG 0.338707 8_3:-21517219 Msa1281780:CDS
CTCACATTAAGGAGCTCTTC+GGG 0.341349 8_3:+21517131 None:intergenic
CCTTGTAGTCAAGATCCTTA+TGG 0.357139 8_3:+21516737 None:intergenic
CAGCATCTTCATTGGGAGAA+TGG 0.357218 8_3:+21517766 None:intergenic
AATGGTTGCTGGGAGCAATA+AGG 0.357762 8_3:+21517784 None:intergenic
AGAAAATACATATTCAACTA+TGG 0.360880 8_3:-21517811 Msa1281780:exon
AAGTTCCTTCTCACTCTCTT+GGG 0.370043 8_3:-21516077 Msa1281780:CDS
GATGAAGAAATCTAAGTCTA+TGG 0.387403 8_3:+21517856 None:intergenic
GAAGTTCCTTCTCACTCTCT+TGG 0.389750 8_3:-21516078 Msa1281780:CDS
GTAATCCCCTGAAGTTTCCT+TGG 0.400457 8_3:+21516103 None:intergenic
GCTGTGGCCAAGGAAACTTC+AGG 0.407979 8_3:-21516110 Msa1281780:CDS
CATATACTTCTGAAATTTGA+CGG 0.410726 8_3:+21515745 None:intergenic
TGGTTGTATGGTATGGTTGA+TGG 0.412752 8_3:-21515905 Msa1281780:three_prime_UTR
TAGAGCTTCAGCATCTTCAT+TGG 0.413067 8_3:+21517758 None:intergenic
ATGGAGAAATAAATGTATCT+TGG 0.423065 8_3:+21518064 None:intergenic
AGATCCTTATGGCTTCTTCA+TGG 0.424810 8_3:+21516748 None:intergenic
TCTCACATTAAGGAGCTCTT+CGG 0.434874 8_3:+21517130 None:intergenic
TTCATTGGGAGAATGGTTGC+TGG 0.439937 8_3:+21517773 None:intergenic
AGAGCTTCAGCATCTTCATT+GGG 0.446820 8_3:+21517759 None:intergenic
AAGGACTTGCCTGGCGAAGA+TGG 0.449423 8_3:+21517045 None:intergenic
TACAGGACAAATACACCTTC+CGG 0.469164 8_3:-21518014 Msa1281780:five_prime_UTR
AAATTGGCTCAAACTGAAGC+TGG 0.471786 8_3:-21516807 Msa1281780:CDS
TGAGATCAAAGGAGACTTTG+AGG 0.477521 8_3:-21517394 Msa1281780:intron
ATGGTTGCTGGGAGCAATAA+GGG 0.478955 8_3:+21517785 None:intergenic
TACCTCTGGCCATCTTCGCC+AGG 0.485111 8_3:-21517054 Msa1281780:intron
TATTATATGGTTGTATGGTA+TGG 0.485186 8_3:-21515912 Msa1281780:three_prime_UTR
TTAATCTTTACAGAAGCTGT+TGG 0.488422 8_3:-21516577 Msa1281780:intron
TTGGTTTATCTTGTTGAATG+TGG 0.489020 8_3:-21515976 Msa1281780:three_prime_UTR
CAGATAAAATTAAAACGGTA+TGG 0.489169 8_3:+21518045 None:intergenic
TTACAGAAGCTGTTGGATGA+AGG 0.491044 8_3:-21516570 Msa1281780:intron
TCTTGAGCATGCTGTGGCCA+AGG 0.493656 8_3:-21516120 Msa1281780:CDS
TATACATATAATAGTGATCA+AGG 0.498067 8_3:-21517920 Msa1281780:five_prime_UTR
TGAGGATCTTATCAAACGAT+TGG 0.500715 8_3:-21517421 Msa1281780:CDS
AGGATCTGATGAATTTCAAA+AGG 0.509384 8_3:-21516550 Msa1281780:CDS
GACATCAGATAAAATTAAAA+CGG 0.510190 8_3:+21518040 None:intergenic
CAAACGCTACAAGCACTCCT+TGG 0.517630 8_3:-21517096 Msa1281780:CDS
CCATAAGGATCTTGACTACA+AGG 0.517780 8_3:-21516737 Msa1281780:CDS
TTATGAAGGCATTTATAATG+AGG 0.522283 8_3:-21517439 Msa1281780:CDS
GATTTGGCTGCACATACCTC+TGG 0.527814 8_3:-21517068 Msa1281780:CDS
CGAGATGCAATCAAGAAGGT+TGG 0.532695 8_3:-21516239 Msa1281780:CDS
GTGACTGCATTTAGGTATGT+TGG 0.533407 8_3:-21516846 Msa1281780:CDS
GAAGCCATGAAGAAGCCATA+AGG 0.541126 8_3:-21516752 Msa1281780:CDS
AAATAATATCTCTACATACA+TGG 0.541773 8_3:+21515796 None:intergenic
CAAATCAGAAAAGCTTATGA+AGG 0.541965 8_3:-21517453 Msa1281780:CDS
CTGTGGCCAAGGAAACTTCA+GGG 0.542389 8_3:-21516109 Msa1281780:CDS
TCATGTCAAGTACTATGAAA+AGG 0.546698 8_3:-21516496 Msa1281780:intron
ACGCTACAAGCACTCCTTGG+AGG 0.551063 8_3:-21517093 Msa1281780:CDS
GAGTCAGTGAAAGAGAAGAA+AGG 0.551826 8_3:-21516774 Msa1281780:CDS
AAAACTGTGATAACAATACT+TGG 0.555304 8_3:-21517501 Msa1281780:CDS
TCATTGGGAGAATGGTTGCT+GGG 0.565172 8_3:+21517774 None:intergenic
TTTATTATATACCTTAGTGA+TGG 0.566723 8_3:+21516659 None:intergenic
TCATGGTACTTCCATCACTA+AGG 0.567292 8_3:-21516670 Msa1281780:intron
AGATGCTGAAGCTCTAAGAA+AGG 0.567867 8_3:-21517751 Msa1281780:CDS
ACGGGTGAGCGCATCCTCAT+CGG 0.568327 8_3:+21516214 None:intergenic
AAAACAGCATCACGTTCCGC+AGG 0.584641 8_3:+21517221 None:intergenic
AGTTCCTTCTCACTCTCTTG+GGG 0.584889 8_3:-21516076 Msa1281780:CDS
AACAGAAAGCTGTGTACCGT+TGG 0.585865 8_3:-21517253 Msa1281780:intron
GCAAATGTTGCTATCAAGAG+TGG 0.587800 8_3:-21517197 Msa1281780:CDS
CGATTGGAATCTGAGATCAA+AGG 0.597023 8_3:-21517405 Msa1281780:CDS
TGTTCTTCTTGAGCATGCTG+TGG 0.597154 8_3:-21516126 Msa1281780:CDS
ATCATTGAAGCAACGAATGG+TGG 0.602219 8_3:+21516518 None:intergenic
TGCAGCCAAATCTTCCTCCA+AGG 0.611461 8_3:+21517079 None:intergenic
CACATTAAGGAGCTCTTCGG+GGG 0.612141 8_3:+21517133 None:intergenic
CCGTTGGATACTTGAACCTG+CGG 0.614913 8_3:-21517237 Msa1281780:CDS
GAGCTCTGCTCACAATCACA+CGG 0.617837 8_3:+21516195 None:intergenic
GCTCTAAGAAAGGCTTTCGA+AGG 0.621766 8_3:-21517741 Msa1281780:intron
GCACAAGCTCCATCAAGAGA+AGG 0.623200 8_3:+21516034 None:intergenic
GGTGCGAGATGCAATCAAGA+AGG 0.643809 8_3:-21516243 Msa1281780:CDS
TCACATTAAGGAGCTCTTCG+GGG 0.651841 8_3:+21517132 None:intergenic
CTTTCCCCAAGAGAGTGAGA+AGG 0.653124 8_3:+21516072 None:intergenic
TACCATGAGTCTCTCTATAG+CGG 0.656028 8_3:+21516685 None:intergenic
CAAGAAGGTTGGAACCGATG+AGG 0.660964 8_3:-21516228 Msa1281780:CDS
AGCTCTGCTCACAATCACAC+GGG 0.668833 8_3:+21516196 None:intergenic
CCGCAGGTTCAAGTATCCAA+CGG 0.670302 8_3:+21517237 None:intergenic
ATGATCATTGAAGCAACGAA+TGG 0.676992 8_3:+21516515 None:intergenic
AACCGCTATAGAGAGACTCA+TGG 0.679537 8_3:-21516687 Msa1281780:CDS
TGCCTGGCGAAGATGGCCAG+AGG 0.681136 8_3:+21517052 None:intergenic
TGTGGCCAAGGAAACTTCAG+GGG 0.706591 8_3:-21516108 Msa1281780:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAGTACTATTTTATTATA+TGG - chr8_3:21517816-21517835 Msa1281780:five_prime_UTR 10.0%
!!! TAAAGTACTATTTTATTATA+TGG - chr8_3:21517816-21517835 Msa1281780:five_prime_UTR 10.0%
!!! TTAAAATGTTTATTTTTGAC+CGG + chr8_3:21515749-21515768 None:intergenic 15.0%
!! TAATGTTGTATTAAAATTGA+TGG - chr8_3:21516183-21516202 Msa1281780:CDS 15.0%
!! CAATTACATATATGAAAATT+AGG - chr8_3:21516790-21516809 Msa1281780:CDS 15.0%
!!! TTAATTTTGATACATTGTTA+AGG - chr8_3:21517299-21517318 Msa1281780:intron 15.0%
!!! TATTTTATTATATGGTTGTA+TGG - chr8_3:21517824-21517843 Msa1281780:five_prime_UTR 15.0%
!!! TATTTGTTAGATTAAGATTA+AGG - chr8_3:21517963-21517982 Msa1281780:five_prime_UTR 15.0%
!!! TTAAAATGTTTATTTTTGAC+CGG + chr8_3:21515749-21515768 None:intergenic 15.0%
!! TAATGTTGTATTAAAATTGA+TGG - chr8_3:21516183-21516202 Msa1281780:CDS 15.0%
!! CAATTACATATATGAAAATT+AGG - chr8_3:21516790-21516809 Msa1281780:CDS 15.0%
!!! TTAATTTTGATACATTGTTA+AGG - chr8_3:21517299-21517318 Msa1281780:intron 15.0%
!!! TATTTTATTATATGGTTGTA+TGG - chr8_3:21517824-21517843 Msa1281780:five_prime_UTR 15.0%
!!! TATTTGTTAGATTAAGATTA+AGG - chr8_3:21517963-21517982 Msa1281780:five_prime_UTR 15.0%
!! GACATCAGATAAAATTAAAA+CGG + chr8_3:21515704-21515723 None:intergenic 20.0%
!! TATACATATAATAGTGATCA+AGG - chr8_3:21515821-21515840 Msa1281780:three_prime_UTR 20.0%
!! AGAAAATACATATTCAACTA+TGG - chr8_3:21515930-21515949 Msa1281780:three_prime_UTR 20.0%
!! ATCTATAAACAAGAAAAAAG+GGG + chr8_3:21516035-21516054 None:intergenic 20.0%
!! GATCTATAAACAAGAAAAAA+GGG + chr8_3:21516036-21516055 None:intergenic 20.0%
!! TGATCTATAAACAAGAAAAA+AGG + chr8_3:21516037-21516056 None:intergenic 20.0%
!!! ATGTTTTTCAATGTTAATCA+TGG + chr8_3:21516375-21516394 None:intergenic 20.0%
!! TTTATTATATACCTTAGTGA+TGG + chr8_3:21517085-21517104 None:intergenic 20.0%
!! AAATAATATCTCTACATACA+TGG + chr8_3:21517948-21517967 None:intergenic 20.0%
!! AATTTAATTCAGAATGTCTT+AGG + chr8_3:21518038-21518057 None:intergenic 20.0%
!! GACATCAGATAAAATTAAAA+CGG + chr8_3:21515704-21515723 None:intergenic 20.0%
!! TATACATATAATAGTGATCA+AGG - chr8_3:21515821-21515840 Msa1281780:three_prime_UTR 20.0%
!! AGAAAATACATATTCAACTA+TGG - chr8_3:21515930-21515949 Msa1281780:three_prime_UTR 20.0%
!! ATCTATAAACAAGAAAAAAG+GGG + chr8_3:21516035-21516054 None:intergenic 20.0%
!! GATCTATAAACAAGAAAAAA+GGG + chr8_3:21516036-21516055 None:intergenic 20.0%
!! TGATCTATAAACAAGAAAAA+AGG + chr8_3:21516037-21516056 None:intergenic 20.0%
!!! ATGTTTTTCAATGTTAATCA+TGG + chr8_3:21516375-21516394 None:intergenic 20.0%
!! TTTATTATATACCTTAGTGA+TGG + chr8_3:21517085-21517104 None:intergenic 20.0%
!! AAATAATATCTCTACATACA+TGG + chr8_3:21517948-21517967 None:intergenic 20.0%
!! AATTTAATTCAGAATGTCTT+AGG + chr8_3:21518038-21518057 None:intergenic 20.0%
! ATGGAGAAATAAATGTATCT+TGG + chr8_3:21515680-21515699 None:intergenic 25.0%
! CAGATAAAATTAAAACGGTA+TGG + chr8_3:21515699-21515718 None:intergenic 25.0%
! AGATATAATCTATAGGACTA+TGG + chr8_3:21516062-21516081 None:intergenic 25.0%
! TCATGACAGATATAATCTAT+AGG + chr8_3:21516069-21516088 None:intergenic 25.0%
!!! ATGATTCATTTTTGTAGGAT+GGG - chr8_3:21516206-21516225 Msa1281780:CDS 25.0%
! AAAACTGTGATAACAATACT+TGG - chr8_3:21516240-21516259 Msa1281780:CDS 25.0%
!!! TTATGAAGGCATTTATAATG+AGG - chr8_3:21516302-21516321 Msa1281780:intron 25.0%
! TTAGAAGAGTTAATGGAAAA+AGG + chr8_3:21516718-21516737 None:intergenic 25.0%
! CATATTGTTAGAAGAGTTAA+TGG + chr8_3:21516725-21516744 None:intergenic 25.0%
! CAATATGCAATACTATATCA+TGG - chr8_3:21516738-21516757 Msa1281780:CDS 25.0%
!!! ATATCATGGTTTTAAAATCG+CGG - chr8_3:21516752-21516771 Msa1281780:CDS 25.0%
! TGTGATATTTCTTGAAATCA+TGG - chr8_3:21516825-21516844 Msa1281780:CDS 25.0%
! GTTGTACATTGAAAACAAAT+TGG - chr8_3:21517327-21517346 Msa1281780:intron 25.0%
! TATTATATGGTTGTATGGTA+TGG - chr8_3:21517829-21517848 Msa1281780:five_prime_UTR 25.0%
!!! CATATACTTCTGAAATTTGA+CGG + chr8_3:21517999-21518018 None:intergenic 25.0%
! TGGAGAAATAAATGTATCTT+GGG + chr8_3:21515679-21515698 None:intergenic 25.0%
! ATGGAGAAATAAATGTATCT+TGG + chr8_3:21515680-21515699 None:intergenic 25.0%
! CAGATAAAATTAAAACGGTA+TGG + chr8_3:21515699-21515718 None:intergenic 25.0%
! AGATATAATCTATAGGACTA+TGG + chr8_3:21516062-21516081 None:intergenic 25.0%
! TCATGACAGATATAATCTAT+AGG + chr8_3:21516069-21516088 None:intergenic 25.0%
!!! ATGATTCATTTTTGTAGGAT+GGG - chr8_3:21516206-21516225 Msa1281780:CDS 25.0%
! AAAACTGTGATAACAATACT+TGG - chr8_3:21516240-21516259 Msa1281780:CDS 25.0%
!!! TTATGAAGGCATTTATAATG+AGG - chr8_3:21516302-21516321 Msa1281780:intron 25.0%
! TTAGAAGAGTTAATGGAAAA+AGG + chr8_3:21516718-21516737 None:intergenic 25.0%
! CATATTGTTAGAAGAGTTAA+TGG + chr8_3:21516725-21516744 None:intergenic 25.0%
! CAATATGCAATACTATATCA+TGG - chr8_3:21516738-21516757 Msa1281780:CDS 25.0%
!!! ATATCATGGTTTTAAAATCG+CGG - chr8_3:21516752-21516771 Msa1281780:CDS 25.0%
! TGTGATATTTCTTGAAATCA+TGG - chr8_3:21516825-21516844 Msa1281780:CDS 25.0%
! GTTGTACATTGAAAACAAAT+TGG - chr8_3:21517327-21517346 Msa1281780:intron 25.0%
! TATTATATGGTTGTATGGTA+TGG - chr8_3:21517829-21517848 Msa1281780:five_prime_UTR 25.0%
!!! CATATACTTCTGAAATTTGA+CGG + chr8_3:21517999-21518018 None:intergenic 25.0%
!! TTTTATCTGATGTCACTTAC+AGG - chr8_3:21515710-21515729 Msa1281780:three_prime_UTR 30.0%
!!! AATGTTTATTTTTGACCGGA+AGG + chr8_3:21515745-21515764 None:intergenic 30.0%
GATGAAGAAATCTAAGTCTA+TGG + chr8_3:21515888-21515907 None:intergenic 30.0%
!! GATGGATGATTCATTTTTGT+AGG - chr8_3:21516201-21516220 Msa1281780:CDS 30.0%
!! GATGATTCATTTTTGTAGGA+TGG - chr8_3:21516205-21516224 Msa1281780:CDS 30.0%
!! TGATTCATTTTTGTAGGATG+GGG - chr8_3:21516207-21516226 Msa1281780:CDS 30.0%
CAAATCAGAAAAGCTTATGA+AGG - chr8_3:21516288-21516307 Msa1281780:intron 30.0%
CAAAAACTACAATGTCATTG+TGG - chr8_3:21516567-21516586 Msa1281780:CDS 30.0%
! ATCATGGTTTCTTGATTTTG+TGG - chr8_3:21516841-21516860 Msa1281780:CDS 30.0%
TGATGAGATCAATCCAAAAT+TGG - chr8_3:21516918-21516937 Msa1281780:intron 30.0%
CAGCTTCTGTAAAGATTAAA+GGG + chr8_3:21517163-21517182 None:intergenic 30.0%
ACAGCTTCTGTAAAGATTAA+AGG + chr8_3:21517164-21517183 None:intergenic 30.0%
TTAATCTTTACAGAAGCTGT+TGG - chr8_3:21517164-21517183 Msa1281780:CDS 30.0%
AGGATCTGATGAATTTCAAA+AGG - chr8_3:21517191-21517210 Msa1281780:CDS 30.0%
TCATGTCAAGTACTATGAAA+AGG - chr8_3:21517245-21517264 Msa1281780:CDS 30.0%
! CTAGCAGAACATTTTATGAA+TGG + chr8_3:21517355-21517374 None:intergenic 30.0%
! ACATTTTCTGATCATATCGT+AGG - chr8_3:21517474-21517493 Msa1281780:CDS 30.0%
!! AAACATCTGAGATGACTTTT+AGG + chr8_3:21517579-21517598 None:intergenic 30.0%
! GACTTAAAGTTGTGATGTTT+TGG - chr8_3:21517746-21517765 Msa1281780:CDS 30.0%
TTGGTTTATCTTGTTGAATG+TGG - chr8_3:21517765-21517784 Msa1281780:CDS 30.0%
! CGTCAAATTTCAGAAGTATA+TGG - chr8_3:21517997-21518016 Msa1281780:five_prime_UTR 30.0%
GGAGAAATAAATGTATCTTG+GGG + chr8_3:21515678-21515697 None:intergenic 30.0%
!! TTTTATCTGATGTCACTTAC+AGG - chr8_3:21515710-21515729 Msa1281780:three_prime_UTR 30.0%
!!! AATGTTTATTTTTGACCGGA+AGG + chr8_3:21515745-21515764 None:intergenic 30.0%
GATGAAGAAATCTAAGTCTA+TGG + chr8_3:21515888-21515907 None:intergenic 30.0%
!! GATGGATGATTCATTTTTGT+AGG - chr8_3:21516201-21516220 Msa1281780:CDS 30.0%
!! GATGATTCATTTTTGTAGGA+TGG - chr8_3:21516205-21516224 Msa1281780:CDS 30.0%
!! TGATTCATTTTTGTAGGATG+GGG - chr8_3:21516207-21516226 Msa1281780:CDS 30.0%
CAAATCAGAAAAGCTTATGA+AGG - chr8_3:21516288-21516307 Msa1281780:intron 30.0%
CAAAAACTACAATGTCATTG+TGG - chr8_3:21516567-21516586 Msa1281780:CDS 30.0%
! ATCATGGTTTCTTGATTTTG+TGG - chr8_3:21516841-21516860 Msa1281780:CDS 30.0%
TGATGAGATCAATCCAAAAT+TGG - chr8_3:21516918-21516937 Msa1281780:intron 30.0%
CAGCTTCTGTAAAGATTAAA+GGG + chr8_3:21517163-21517182 None:intergenic 30.0%
ACAGCTTCTGTAAAGATTAA+AGG + chr8_3:21517164-21517183 None:intergenic 30.0%
TTAATCTTTACAGAAGCTGT+TGG - chr8_3:21517164-21517183 Msa1281780:CDS 30.0%
AGGATCTGATGAATTTCAAA+AGG - chr8_3:21517191-21517210 Msa1281780:CDS 30.0%
TCATGTCAAGTACTATGAAA+AGG - chr8_3:21517245-21517264 Msa1281780:CDS 30.0%
! CTAGCAGAACATTTTATGAA+TGG + chr8_3:21517355-21517374 None:intergenic 30.0%
! ACATTTTCTGATCATATCGT+AGG - chr8_3:21517474-21517493 Msa1281780:CDS 30.0%
!! AAACATCTGAGATGACTTTT+AGG + chr8_3:21517579-21517598 None:intergenic 30.0%
! GACTTAAAGTTGTGATGTTT+TGG - chr8_3:21517746-21517765 Msa1281780:CDS 30.0%
TTGGTTTATCTTGTTGAATG+TGG - chr8_3:21517765-21517784 Msa1281780:CDS 30.0%
! CGTCAAATTTCAGAAGTATA+TGG - chr8_3:21517997-21518016 Msa1281780:five_prime_UTR 30.0%
TGAGGATCTTATCAAACGAT+TGG - chr8_3:21516320-21516339 Msa1281780:intron 35.0%
!!! ATTTTTCGAGCAGCTTTTAG+TGG - chr8_3:21516867-21516886 Msa1281780:intron 35.0%
!!! TTTTTCGAGCAGCTTTTAGT+GGG - chr8_3:21516868-21516887 Msa1281780:intron 35.0%
ATGATCATTGAAGCAACGAA+TGG + chr8_3:21517229-21517248 None:intergenic 35.0%
! TTTTCTGATCATATCGTAGG+TGG - chr8_3:21517477-21517496 Msa1281780:CDS 35.0%
!!! GTTGATGGTTCATTTTGACT+TGG - chr8_3:21517851-21517870 Msa1281780:five_prime_UTR 35.0%
TGAGGATCTTATCAAACGAT+TGG - chr8_3:21516320-21516339 Msa1281780:intron 35.0%
!!! ATTTTTCGAGCAGCTTTTAG+TGG - chr8_3:21516867-21516886 Msa1281780:intron 35.0%
!!! TTTTTCGAGCAGCTTTTAGT+GGG - chr8_3:21516868-21516887 Msa1281780:intron 35.0%
ATGATCATTGAAGCAACGAA+TGG + chr8_3:21517229-21517248 None:intergenic 35.0%
! TTTTCTGATCATATCGTAGG+TGG - chr8_3:21517477-21517496 Msa1281780:CDS 35.0%
!!! GTTGATGGTTCATTTTGACT+TGG - chr8_3:21517851-21517870 Msa1281780:five_prime_UTR 35.0%
TACAGGACAAATACACCTTC+CGG - chr8_3:21515727-21515746 Msa1281780:three_prime_UTR 40.0%
AGAGCTTCAGCATCTTCATT+GGG + chr8_3:21515985-21516004 None:intergenic 40.0%
TAGAGCTTCAGCATCTTCAT+TGG + chr8_3:21515986-21516005 None:intergenic 40.0%
!! AGATGCTGAAGCTCTAAGAA+AGG - chr8_3:21515990-21516009 Msa1281780:three_prime_UTR 40.0%
! CGATTGGAATCTGAGATCAA+AGG - chr8_3:21516336-21516355 Msa1281780:intron 40.0%
TGAGATCAAAGGAGACTTTG+AGG - chr8_3:21516347-21516366 Msa1281780:intron 40.0%
GCAAATGTTGCTATCAAGAG+TGG - chr8_3:21516544-21516563 Msa1281780:CDS 40.0%
TCTCACATTAAGGAGCTCTT+CGG + chr8_3:21516614-21516633 None:intergenic 40.0%
TAATGGAAAAAGGACTTGCC+TGG + chr8_3:21516708-21516727 None:intergenic 40.0%
!! TTTTCGAGCAGCTTTTAGTG+GGG - chr8_3:21516869-21516888 Msa1281780:intron 40.0%
GTGACTGCATTTAGGTATGT+TGG - chr8_3:21516895-21516914 Msa1281780:intron 40.0%
! GCTTCAGTTTGAGCCAATTT+TGG + chr8_3:21516934-21516953 None:intergenic 40.0%
! AAATTGGCTCAAACTGAAGC+TGG - chr8_3:21516934-21516953 Msa1281780:intron 40.0%
GAGTCAGTGAAAGAGAAGAA+AGG - chr8_3:21516967-21516986 Msa1281780:intron 40.0%
AGATCCTTATGGCTTCTTCA+TGG + chr8_3:21516996-21517015 None:intergenic 40.0%
CCTTGTAGTCAAGATCCTTA+TGG + chr8_3:21517007-21517026 None:intergenic 40.0%
CCATAAGGATCTTGACTACA+AGG - chr8_3:21517004-21517023 Msa1281780:intron 40.0%
TACCATGAGTCTCTCTATAG+CGG + chr8_3:21517059-21517078 None:intergenic 40.0%
TCATGGTACTTCCATCACTA+AGG - chr8_3:21517071-21517090 Msa1281780:CDS 40.0%
TTACAGAAGCTGTTGGATGA+AGG - chr8_3:21517171-21517190 Msa1281780:CDS 40.0%
ATCATTGAAGCAACGAATGG+TGG + chr8_3:21517226-21517245 None:intergenic 40.0%
AAGTTCCTTCTCACTCTCTT+GGG - chr8_3:21517664-21517683 Msa1281780:intron 40.0%
GAAAGTTCTCCTTCTCTTGA+TGG - chr8_3:21517698-21517717 Msa1281780:intron 40.0%
TGGTTGTATGGTATGGTTGA+TGG - chr8_3:21517836-21517855 Msa1281780:five_prime_UTR 40.0%
TACAGGACAAATACACCTTC+CGG - chr8_3:21515727-21515746 Msa1281780:three_prime_UTR 40.0%
AGAGCTTCAGCATCTTCATT+GGG + chr8_3:21515985-21516004 None:intergenic 40.0%
TAGAGCTTCAGCATCTTCAT+TGG + chr8_3:21515986-21516005 None:intergenic 40.0%
!! AGATGCTGAAGCTCTAAGAA+AGG - chr8_3:21515990-21516009 Msa1281780:three_prime_UTR 40.0%
! CGATTGGAATCTGAGATCAA+AGG - chr8_3:21516336-21516355 Msa1281780:intron 40.0%
TGAGATCAAAGGAGACTTTG+AGG - chr8_3:21516347-21516366 Msa1281780:intron 40.0%
GCAAATGTTGCTATCAAGAG+TGG - chr8_3:21516544-21516563 Msa1281780:CDS 40.0%
TCTCACATTAAGGAGCTCTT+CGG + chr8_3:21516614-21516633 None:intergenic 40.0%
TAATGGAAAAAGGACTTGCC+TGG + chr8_3:21516708-21516727 None:intergenic 40.0%
!! TTTTCGAGCAGCTTTTAGTG+GGG - chr8_3:21516869-21516888 Msa1281780:intron 40.0%
GTGACTGCATTTAGGTATGT+TGG - chr8_3:21516895-21516914 Msa1281780:intron 40.0%
! GCTTCAGTTTGAGCCAATTT+TGG + chr8_3:21516934-21516953 None:intergenic 40.0%
! AAATTGGCTCAAACTGAAGC+TGG - chr8_3:21516934-21516953 Msa1281780:intron 40.0%
GAGTCAGTGAAAGAGAAGAA+AGG - chr8_3:21516967-21516986 Msa1281780:intron 40.0%
AGATCCTTATGGCTTCTTCA+TGG + chr8_3:21516996-21517015 None:intergenic 40.0%
CCTTGTAGTCAAGATCCTTA+TGG + chr8_3:21517007-21517026 None:intergenic 40.0%
CCATAAGGATCTTGACTACA+AGG - chr8_3:21517004-21517023 Msa1281780:intron 40.0%
TACCATGAGTCTCTCTATAG+CGG + chr8_3:21517059-21517078 None:intergenic 40.0%
TCATGGTACTTCCATCACTA+AGG - chr8_3:21517071-21517090 Msa1281780:CDS 40.0%
TTACAGAAGCTGTTGGATGA+AGG - chr8_3:21517171-21517190 Msa1281780:CDS 40.0%
ATCATTGAAGCAACGAATGG+TGG + chr8_3:21517226-21517245 None:intergenic 40.0%
AAGTTCCTTCTCACTCTCTT+GGG - chr8_3:21517664-21517683 Msa1281780:intron 40.0%
GAAAGTTCTCCTTCTCTTGA+TGG - chr8_3:21517698-21517717 Msa1281780:intron 40.0%
TGGTTGTATGGTATGGTTGA+TGG - chr8_3:21517836-21517855 Msa1281780:five_prime_UTR 40.0%
ATGGTTGCTGGGAGCAATAA+GGG + chr8_3:21515959-21515978 None:intergenic 45.0%
AATGGTTGCTGGGAGCAATA+AGG + chr8_3:21515960-21515979 None:intergenic 45.0%
TCATTGGGAGAATGGTTGCT+GGG + chr8_3:21515970-21515989 None:intergenic 45.0%
TTCATTGGGAGAATGGTTGC+TGG + chr8_3:21515971-21515990 None:intergenic 45.0%
CAGCATCTTCATTGGGAGAA+TGG + chr8_3:21515978-21515997 None:intergenic 45.0%
!! GCTCTAAGAAAGGCTTTCGA+AGG - chr8_3:21516000-21516019 Msa1281780:three_prime_UTR 45.0%
AACAGAAAGCTGTGTACCGT+TGG - chr8_3:21516488-21516507 Msa1281780:intron 45.0%
TCACATTAAGGAGCTCTTCG+GGG + chr8_3:21516612-21516631 None:intergenic 45.0%
CTCACATTAAGGAGCTCTTC+GGG + chr8_3:21516613-21516632 None:intergenic 45.0%
CGTAAGCACGTCTCACATTA+AGG + chr8_3:21516624-21516643 None:intergenic 45.0%
GAAGCCATGAAGAAGCCATA+AGG - chr8_3:21516989-21517008 Msa1281780:intron 45.0%
AACCGCTATAGAGAGACTCA+TGG - chr8_3:21517054-21517073 Msa1281780:intron 45.0%
CGAGATGCAATCAAGAAGGT+TGG - chr8_3:21517502-21517521 Msa1281780:CDS 45.0%
TGTTCTTCTTGAGCATGCTG+TGG - chr8_3:21517615-21517634 Msa1281780:intron 45.0%
GTAATCCCCTGAAGTTTCCT+TGG + chr8_3:21517641-21517660 None:intergenic 45.0%
GAAGTTCCTTCTCACTCTCT+TGG - chr8_3:21517663-21517682 Msa1281780:intron 45.0%
AGTTCCTTCTCACTCTCTTG+GGG - chr8_3:21517665-21517684 Msa1281780:intron 45.0%
ATGGTTGCTGGGAGCAATAA+GGG + chr8_3:21515959-21515978 None:intergenic 45.0%
AATGGTTGCTGGGAGCAATA+AGG + chr8_3:21515960-21515979 None:intergenic 45.0%
TCATTGGGAGAATGGTTGCT+GGG + chr8_3:21515970-21515989 None:intergenic 45.0%
TTCATTGGGAGAATGGTTGC+TGG + chr8_3:21515971-21515990 None:intergenic 45.0%
CAGCATCTTCATTGGGAGAA+TGG + chr8_3:21515978-21515997 None:intergenic 45.0%
!! GCTCTAAGAAAGGCTTTCGA+AGG - chr8_3:21516000-21516019 Msa1281780:three_prime_UTR 45.0%
AACAGAAAGCTGTGTACCGT+TGG - chr8_3:21516488-21516507 Msa1281780:intron 45.0%
TCACATTAAGGAGCTCTTCG+GGG + chr8_3:21516612-21516631 None:intergenic 45.0%
CTCACATTAAGGAGCTCTTC+GGG + chr8_3:21516613-21516632 None:intergenic 45.0%
CGTAAGCACGTCTCACATTA+AGG + chr8_3:21516624-21516643 None:intergenic 45.0%
GAAGCCATGAAGAAGCCATA+AGG - chr8_3:21516989-21517008 Msa1281780:intron 45.0%
AACCGCTATAGAGAGACTCA+TGG - chr8_3:21517054-21517073 Msa1281780:intron 45.0%
CGAGATGCAATCAAGAAGGT+TGG - chr8_3:21517502-21517521 Msa1281780:CDS 45.0%
TGTTCTTCTTGAGCATGCTG+TGG - chr8_3:21517615-21517634 Msa1281780:intron 45.0%
GTAATCCCCTGAAGTTTCCT+TGG + chr8_3:21517641-21517660 None:intergenic 45.0%
GAAGTTCCTTCTCACTCTCT+TGG - chr8_3:21517663-21517682 Msa1281780:intron 45.0%
AGTTCCTTCTCACTCTCTTG+GGG - chr8_3:21517665-21517684 Msa1281780:intron 45.0%
CCGCAGGTTCAAGTATCCAA+CGG + chr8_3:21516507-21516526 None:intergenic 50.0%
CCGTTGGATACTTGAACCTG+CGG - chr8_3:21516504-21516523 Msa1281780:CDS 50.0%
AAAACAGCATCACGTTCCGC+AGG + chr8_3:21516523-21516542 None:intergenic 50.0%
!! TGCGGAACGTGATGCTGTTT+TGG - chr8_3:21516522-21516541 Msa1281780:CDS 50.0%
CACATTAAGGAGCTCTTCGG+GGG + chr8_3:21516611-21516630 None:intergenic 50.0%
CAAACGCTACAAGCACTCCT+TGG - chr8_3:21516645-21516664 Msa1281780:intron 50.0%
GCACTCCTTGGAGGAAGATT+TGG - chr8_3:21516657-21516676 Msa1281780:intron 50.0%
TGCAGCCAAATCTTCCTCCA+AGG + chr8_3:21516665-21516684 None:intergenic 50.0%
GATTTGGCTGCACATACCTC+TGG - chr8_3:21516673-21516692 Msa1281780:CDS 50.0%
! TGGGGCTAGTGACTGCATTT+AGG - chr8_3:21516887-21516906 Msa1281780:intron 50.0%
GGTGCGAGATGCAATCAAGA+AGG - chr8_3:21517498-21517517 Msa1281780:CDS 50.0%
CAAGAAGGTTGGAACCGATG+AGG - chr8_3:21517513-21517532 Msa1281780:CDS 50.0%
AGCTCTGCTCACAATCACAC+GGG + chr8_3:21517548-21517567 None:intergenic 50.0%
GAGCTCTGCTCACAATCACA+CGG + chr8_3:21517549-21517568 None:intergenic 50.0%
CTGTGGCCAAGGAAACTTCA+GGG - chr8_3:21517632-21517651 Msa1281780:intron 50.0%
TGTGGCCAAGGAAACTTCAG+GGG - chr8_3:21517633-21517652 Msa1281780:intron 50.0%
CTTTCCCCAAGAGAGTGAGA+AGG + chr8_3:21517672-21517691 None:intergenic 50.0%
GCACAAGCTCCATCAAGAGA+AGG + chr8_3:21517710-21517729 None:intergenic 50.0%
CCGCAGGTTCAAGTATCCAA+CGG + chr8_3:21516507-21516526 None:intergenic 50.0%
CCGTTGGATACTTGAACCTG+CGG - chr8_3:21516504-21516523 Msa1281780:CDS 50.0%
AAAACAGCATCACGTTCCGC+AGG + chr8_3:21516523-21516542 None:intergenic 50.0%
!! TGCGGAACGTGATGCTGTTT+TGG - chr8_3:21516522-21516541 Msa1281780:CDS 50.0%
CACATTAAGGAGCTCTTCGG+GGG + chr8_3:21516611-21516630 None:intergenic 50.0%
CAAACGCTACAAGCACTCCT+TGG - chr8_3:21516645-21516664 Msa1281780:intron 50.0%
GCACTCCTTGGAGGAAGATT+TGG - chr8_3:21516657-21516676 Msa1281780:intron 50.0%
TGCAGCCAAATCTTCCTCCA+AGG + chr8_3:21516665-21516684 None:intergenic 50.0%
GATTTGGCTGCACATACCTC+TGG - chr8_3:21516673-21516692 Msa1281780:CDS 50.0%
! TGGGGCTAGTGACTGCATTT+AGG - chr8_3:21516887-21516906 Msa1281780:intron 50.0%
GGTGCGAGATGCAATCAAGA+AGG - chr8_3:21517498-21517517 Msa1281780:CDS 50.0%
CAAGAAGGTTGGAACCGATG+AGG - chr8_3:21517513-21517532 Msa1281780:CDS 50.0%
AGCTCTGCTCACAATCACAC+GGG + chr8_3:21517548-21517567 None:intergenic 50.0%
GAGCTCTGCTCACAATCACA+CGG + chr8_3:21517549-21517568 None:intergenic 50.0%
CTGTGGCCAAGGAAACTTCA+GGG - chr8_3:21517632-21517651 Msa1281780:intron 50.0%
TGTGGCCAAGGAAACTTCAG+GGG - chr8_3:21517633-21517652 Msa1281780:intron 50.0%
CTTTCCCCAAGAGAGTGAGA+AGG + chr8_3:21517672-21517691 None:intergenic 50.0%
GCACAAGCTCCATCAAGAGA+AGG + chr8_3:21517710-21517729 None:intergenic 50.0%
ACGCTACAAGCACTCCTTGG+AGG - chr8_3:21516648-21516667 Msa1281780:intron 55.0%
AAGGACTTGCCTGGCGAAGA+TGG + chr8_3:21516699-21516718 None:intergenic 55.0%
TCTTGAGCATGCTGTGGCCA+AGG - chr8_3:21517621-21517640 Msa1281780:intron 55.0%
GCTGTGGCCAAGGAAACTTC+AGG - chr8_3:21517631-21517650 Msa1281780:intron 55.0%
ACGCTACAAGCACTCCTTGG+AGG - chr8_3:21516648-21516667 Msa1281780:intron 55.0%
AAGGACTTGCCTGGCGAAGA+TGG + chr8_3:21516699-21516718 None:intergenic 55.0%
TCTTGAGCATGCTGTGGCCA+AGG - chr8_3:21517621-21517640 Msa1281780:intron 55.0%
GCTGTGGCCAAGGAAACTTC+AGG - chr8_3:21517631-21517650 Msa1281780:intron 55.0%
GAGCTCTTCGGGGGAGAGAA+TGG + chr8_3:21516602-21516621 None:intergenic 60.0%
TACCTCTGGCCATCTTCGCC+AGG - chr8_3:21516687-21516706 Msa1281780:CDS 60.0%
ACGGGTGAGCGCATCCTCAT+CGG + chr8_3:21517530-21517549 None:intergenic 60.0%
GAGCTCTTCGGGGGAGAGAA+TGG + chr8_3:21516602-21516621 None:intergenic 60.0%
TACCTCTGGCCATCTTCGCC+AGG - chr8_3:21516687-21516706 Msa1281780:CDS 60.0%
ACGGGTGAGCGCATCCTCAT+CGG + chr8_3:21517530-21517549 None:intergenic 60.0%
TGCCTGGCGAAGATGGCCAG+AGG + chr8_3:21516692-21516711 None:intergenic 65.0%
TGCCTGGCGAAGATGGCCAG+AGG + chr8_3:21516692-21516711 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 21515677 21518086 21515677 ID=Msa1281780;Name=Msa1281780
chr8_3 mRNA 21515677 21518086 21515677 ID=Msa1281780-mRNA-1;Parent=Msa1281780;Name=Msa1281780-mRNA-1;_AED=0.34;_eAED=0.34;_QI=272|1|1|1|1|1|6|387|313
chr8_3 exon 21515677 21516267 21515677 ID=Msa1281780-mRNA-1:exon:7844;Parent=Msa1281780-mRNA-1
chr8_3 exon 21516497 21516586 21516497 ID=Msa1281780-mRNA-1:exon:7843;Parent=Msa1281780-mRNA-1
chr8_3 exon 21516671 21516883 21516671 ID=Msa1281780-mRNA-1:exon:7842;Parent=Msa1281780-mRNA-1
chr8_3 exon 21517055 21517270 21517055 ID=Msa1281780-mRNA-1:exon:7841;Parent=Msa1281780-mRNA-1
chr8_3 exon 21517395 21517540 21517395 ID=Msa1281780-mRNA-1:exon:7840;Parent=Msa1281780-mRNA-1
chr8_3 exon 21517742 21518086 21517742 ID=Msa1281780-mRNA-1:exon:7839;Parent=Msa1281780-mRNA-1
chr8_3 five_prime_UTR 21517815 21518086 21517815 ID=Msa1281780-mRNA-1:five_prime_utr;Parent=Msa1281780-mRNA-1
chr8_3 CDS 21517742 21517814 21517742 ID=Msa1281780-mRNA-1:cds;Parent=Msa1281780-mRNA-1
chr8_3 CDS 21517395 21517540 21517395 ID=Msa1281780-mRNA-1:cds;Parent=Msa1281780-mRNA-1
chr8_3 CDS 21517055 21517270 21517055 ID=Msa1281780-mRNA-1:cds;Parent=Msa1281780-mRNA-1
chr8_3 CDS 21516671 21516883 21516671 ID=Msa1281780-mRNA-1:cds;Parent=Msa1281780-mRNA-1
chr8_3 CDS 21516497 21516586 21516497 ID=Msa1281780-mRNA-1:cds;Parent=Msa1281780-mRNA-1
chr8_3 CDS 21516064 21516267 21516064 ID=Msa1281780-mRNA-1:cds;Parent=Msa1281780-mRNA-1
chr8_3 three_prime_UTR 21515677 21516063 21515677 ID=Msa1281780-mRNA-1:three_prime_utr;Parent=Msa1281780-mRNA-1
Gene Sequence

>Msa1281780

ATGGCTACCCTTATTGCTCCCAGCAACCATTCTCCCAATGAAGATGCTGAAGCTCTAAGAAAGGCTTTCGAAGGATGGGGTACTGATGAGAAAACTGTGATAACAATACTTGGTCATAGAAACTCTAATCAGATACAGCAAATCAGAAAAGCTTATGAAGGCATTTATAATGAGGATCTTATCAAACGATTGGAATCTGAGATCAAAGGAGACTTTGAGAAAGCTGTGTACCGTTGGATACTTGAACCTGCGGAACGTGATGCTGTTTTGGCAAATGTTGCTATCAAGAGTGGCAAAAACTACAATGTCATTGTGGAAATTTCGACCATTCTCTCCCCCGAAGAGCTCCTTAATGTGAGACGTGCTTACGTCAAACGCTACAAGCACTCCTTGGAGGAAGATTTGGCTGCACATACCTCTGGCCATCTTCGCCAGCTTTTAGTGGGGCTAGTGACTGCATTTAGGTATGTTGGTGATGAGATCAATCCAAAATTGGCTCAAACTGAAGCTGGAATTCTTCATGAGTCAGTGAAAGAGAAGAAAGGAAGCCATGAAGAAGCCATAAGGATCTTGACTACAAGGAGCAAGACTCAGCTGATTGCGACATTCAACCGCTATAGAGAGACTCATGGTACTTCCATCACTAAGAAGCTGTTGGATGAAGGATCTGATGAATTTCAAAAGGCATTGTATACCACCATTCGTTGCTTCAATGATCATGTCAAGTACTATGAAAAGGTGGTGCGAGATGCAATCAAGAAGGTTGGAACCGATGAGGATGCGCTCACCCGTGTGATTGTGAGCAGAGCTCAGCATGACCTAAAAGTCATCTCAGATGTTTACTACAAAAGAAACAGTGTTCTTCTTGAGCATGCTGTGGCCAAGGAAACTTCAGGGGATTACAAGAAGTTCCTTCTCACTCTCTTGGGGAAAGAAGAATGA

Protein sequence

>Msa1281780

MATLIAPSNHSPNEDAEALRKAFEGWGTDEKTVITILGHRNSNQIQQIRKAYEGIYNEDLIKRLESEIKGDFEKAVYRWILEPAERDAVLANVAIKSGKNYNVIVEISTILSPEELLNVRRAYVKRYKHSLEEDLAAHTSGHLRQLLVGLVTAFRYVGDEINPKLAQTEAGILHESVKEKKGSHEEAIRILTTRSKTQLIATFNRYRETHGTSITKKLLDEGSDEFQKALYTTIRCFNDHVKYYEKVVRDAIKKVGTDEDALTRVIVSRAQHDLKVISDVYYKRNSVLLEHAVAKETSGDYKKFLLTLLGKEE*