AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0106630


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0106630 MtrunA17_Chr1g0162841 95.641 390 17 0 1 390 1 390 0.0 769
Msa0106630 MtrunA17_Chr3g0113931 34.028 144 94 1 72 215 15 157 3.16e-24 104
Msa0106630 MtrunA17_Chr4g0040351 27.517 149 102 2 57 205 1 143 7.33e-13 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0106630 AT2G33560.2 55.087 403 158 6 2 390 3 396 4.03e-150 430
Msa0106630 AT2G33560.1 55.224 402 158 7 2 390 3 395 1.38e-149 429
Msa0106630 AT5G05510.1 33.571 140 92 1 72 211 19 157 1.85e-21 96.3
Msa0106630 AT2G20635.1 38.519 135 82 1 79 212 11 145 1.64e-19 90.5

Find 112 sgRNAs with CRISPR-Local

Find 271 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATTTCATGTAACAATTTA+TGG 0.081181 1_3:+16163517 Msa0106630:three_prime_UTR
TGCAAAATGGAAATCCTTTA+AGG 0.118247 1_3:+16162561 Msa0106630:CDS
AGCATTTGAATCTTTATAAA+TGG 0.182533 1_3:-16162443 None:intergenic
GGCGAAAATCAGCACCTTAA+AGG 0.243628 1_3:-16162575 None:intergenic
TCCCACAGCGAACTGGAATT+AGG 0.287201 1_3:+16162709 Msa0106630:CDS
CGTGTTCCAACTATGAATTT+TGG 0.294547 1_3:-16159647 None:intergenic
ACAATGCAATTCCTGCAAAA+TGG 0.312255 1_3:+16162548 Msa0106630:CDS
TTGGCATTCGGAACGGTATA+AGG 0.315818 1_3:+16161059 Msa0106630:CDS
CATTTCATGTAACAATTTAT+GGG 0.315985 1_3:+16163518 Msa0106630:three_prime_UTR
AGCAATGTGTCCGTGCATTT+TGG 0.329337 1_3:+16161040 Msa0106630:CDS
AAACACATGTGTAGCTTTCC+AGG 0.334465 1_3:-16163551 None:intergenic
GAGGACTTACCCTCTGCTTT+CGG 0.357727 1_3:-16163239 None:intergenic
ATAATCAGTTTGTACTTGTA+TGG 0.359054 1_3:+16163630 Msa0106630:three_prime_UTR
CCCACAGCGAACTGGAATTA+GGG 0.370316 1_3:+16162710 Msa0106630:CDS
CTTCTCGCCAAGGGAGATAA+TGG 0.383418 1_3:+16161961 Msa0106630:CDS
GGCAGAAAATTGCTTTGATA+AGG 0.384613 1_3:+16161221 Msa0106630:intron
AGATTTCTTGAGGTAATTAT+CGG 0.385309 1_3:-16159859 None:intergenic
GAGGCACCTGTGCGTAGCTT+TGG 0.395057 1_3:+16161934 Msa0106630:CDS
CAGAACCATTACTGTTCAAT+GGG 0.401858 1_3:-16162077 None:intergenic
TTGCCTAGTCTTCAAATTTG+AGG 0.403651 1_3:-16163258 None:intergenic
TTCTTTGAAAGTTTCCCATT+CGG 0.413014 1_3:-16159772 None:intergenic
AGCATATGAAATGTAGAAAT+CGG 0.414170 1_3:-16161292 None:intergenic
GCAGAACCATTACTGTTCAA+TGG 0.418471 1_3:-16162078 None:intergenic
CAGAAAGATTACTGCTCAAA+GGG 0.419258 1_3:-16162113 None:intergenic
ATCTTTCTGTTAAGAATGAT+AGG 0.426195 1_3:+16162127 Msa0106630:CDS
GCTCTTCCAAAATTCATAGT+TGG 0.438635 1_3:+16159641 Msa0106630:five_prime_UTR
ATCCAGACCCGTCACACTCT+TGG 0.440039 1_3:+16162488 Msa0106630:CDS
CATTTCATATGCTTCGCACT+TGG 0.440560 1_3:+16161302 Msa0106630:CDS
CTATGCCAAGTTCAAATGTC+TGG 0.447120 1_3:-16161353 None:intergenic
CGGGTCTGGATGAGGTGGGC+AGG 0.447626 1_3:-16162476 None:intergenic
AATGCTAGAAACTCTGTCTC+TGG 0.451174 1_3:-16159732 None:intergenic
CCTCCAGGTGGAGATAGCTC+AGG 0.451234 1_3:+16161000 Msa0106630:CDS
AGCCAAGAGTGTGACGGGTC+TGG 0.456101 1_3:-16162490 None:intergenic
ATCTGGGGAGGCTGCTATGC+GGG 0.457917 1_3:-16163449 None:intergenic
GACTAGGCAAGACGACGAAA+AGG 0.475024 1_3:+16163271 Msa0106630:CDS
CTAGCATTGAAGAGAGAAAC+GGG 0.485326 1_3:+16159747 Msa0106630:CDS
TTTCAGGTCCCACAGCGAAC+TGG 0.488532 1_3:+16162702 Msa0106630:intron
TCTAGCATTGAAGAGAGAAA+CGG 0.489301 1_3:+16159746 Msa0106630:CDS
CACTCTTGGCTCAAACTTGG+TGG 0.494308 1_3:+16162502 Msa0106630:CDS
GAAGAGAAACCGAGTTACTA+AGG 0.496845 1_3:+16163406 Msa0106630:intron
AGGTGGAGATAGCTCAGGGC+TGG 0.499562 1_3:+16161005 Msa0106630:CDS
TCACACTCTTGGCTCAAACT+TGG 0.500855 1_3:+16162499 Msa0106630:CDS
GGTTGAGAATGTTAACGTTA+CGG 0.502066 1_3:-16159818 None:intergenic
GCGAAGATCCTCTTCTCCCT+TGG 0.503308 1_3:+16160017 Msa0106630:CDS
AGTCCTCAAATTTGAAGACT+AGG 0.504667 1_3:+16163255 Msa0106630:CDS
GAATCTTTATAAATGGAAAG+TGG 0.506850 1_3:-16162436 None:intergenic
CCCTAATTCCAGTTCGCTGT+GGG 0.510029 1_3:-16162710 None:intergenic
ACGACGAAAAGGACTTCAAA+AGG 0.511321 1_3:+16163282 Msa0106630:CDS
TGATAGCATGTTGCTGCAAA+GGG 0.512872 1_3:-16163497 None:intergenic
CTATGCGGGAAGTTGCGTAA+TGG 0.514966 1_3:-16163435 None:intergenic
ATTACTGCTCAAAGGGGCCA+AGG 0.521220 1_3:-16162106 None:intergenic
TTGTGTTGTAGGTGCGCCCT+TGG 0.521457 1_3:+16162053 Msa0106630:intron
GAGAGAAACGGGAACCGAAT+GGG 0.521715 1_3:+16159758 Msa0106630:CDS
GACCTAACCATTATCTCCCT+TGG 0.523632 1_3:-16161968 None:intergenic
CACTCTAACCAAGGGAGAAG+AGG 0.525625 1_3:-16160025 None:intergenic
TTGGCCCCATTGAACAGTAA+TGG 0.526038 1_3:+16162072 Msa0106630:CDS
TGGATCCTTCCTTAGTAACT+CGG 0.526271 1_3:-16163415 None:intergenic
ACAGAAAGATTACTGCTCAA+AGG 0.527970 1_3:-16162114 None:intergenic
GTTCAAGAAGCGTTTCCTCC+AGG 0.530661 1_3:+16160985 Msa0106630:CDS
AACGTGAGACCTTTGAAAAG+AGG 0.533683 1_3:+16159795 Msa0106630:CDS
ATCAACAAACACCGGGATGC+AGG 0.534208 1_3:-16162754 None:intergenic
TAATGGTTCTGCTAAGCCCT+TGG 0.541098 1_3:+16162089 Msa0106630:CDS
GTTTGAGCCAAGAGTGTGAC+GGG 0.542618 1_3:-16162495 None:intergenic
GCTAACCAGACATTTGAACT+TGG 0.546783 1_3:+16161348 Msa0106630:CDS
TTTGGAACTCTTCTCGCCAA+GGG 0.546864 1_3:+16161952 Msa0106630:CDS
GAGTGTGACGGGTCTGGATG+AGG 0.550155 1_3:-16162484 None:intergenic
ATTACTGTTCAATGGGGCCA+AGG 0.550814 1_3:-16162070 None:intergenic
CTCCAGGTGGAGATAGCTCA+GGG 0.552572 1_3:+16161001 Msa0106630:CDS
GTTGAATAAGAGATTTCTTG+AGG 0.555118 1_3:-16159869 None:intergenic
CATTTGAACTTGGCATAGCT+AGG 0.559506 1_3:+16161358 Msa0106630:CDS
AGAAACCGAGTTACTAAGGA+AGG 0.560277 1_3:+16163410 Msa0106630:CDS
TTCTTGTACGCTCAATGTCA+AGG 0.562298 1_3:+16161773 Msa0106630:CDS
TGGAGATAGCTCAGGGCTGG+TGG 0.563908 1_3:+16161008 Msa0106630:CDS
TGTGACGGGTCTGGATGAGG+TGG 0.564742 1_3:-16162481 None:intergenic
GGAATTAGGGCTACAGTGGT+TGG 0.569381 1_3:+16162723 Msa0106630:CDS
CTTTGGAACTCTTCTCGCCA+AGG 0.569504 1_3:+16161951 Msa0106630:CDS
CATTCTTCATCAACAAACAC+CGG 0.569992 1_3:-16162762 None:intergenic
ATGATAGCATGTTGCTGCAA+AGG 0.571911 1_3:-16163498 None:intergenic
TGGTGCAAGTGCCTGCATCC+CGG 0.572563 1_3:+16162743 Msa0106630:CDS
CGGTGTGACACTTGAGAGCA+TGG 0.576550 1_3:-16159839 None:intergenic
ATGAATACTCACTCTAACCA+AGG 0.581627 1_3:-16160034 None:intergenic
AATCTCTTATTCAACAGCGA+AGG 0.583146 1_3:+16159877 Msa0106630:CDS
GCCCTAATTCCAGTTCGCTG+TGG 0.587920 1_3:-16162711 None:intergenic
AACACATGTGTAGCTTTCCA+GGG 0.588893 1_3:-16163550 None:intergenic
TATAAAGATTCAAATGCTAG+TGG 0.592975 1_3:+16162448 Msa0106630:CDS
AGAGAGAAACGGGAACCGAA+TGG 0.595749 1_3:+16159757 Msa0106630:CDS
AGAGTTCCAAAGCTACGCAC+AGG 0.601818 1_3:-16161940 None:intergenic
AGCCCTGAGCTATCTCCACC+TGG 0.603020 1_3:-16161003 None:intergenic
GTTCCGAATGCCAAAATGCA+CGG 0.610220 1_3:-16161050 None:intergenic
GATGGTGAAGGTGTATGAAG+TGG 0.612717 1_3:+16160962 Msa0106630:intron
TTTGTTGATGAAGAATGTCA+AGG 0.612992 1_3:+16162768 Msa0106630:CDS
TTCATTAAATCCGAAAGCAG+AGG 0.613152 1_3:+16163229 Msa0106630:CDS
TTACTGCTCAAAGGGGCCAA+GGG 0.614551 1_3:-16162105 None:intergenic
GTGACGGGTCTGGATGAGGT+GGG 0.615219 1_3:-16162480 None:intergenic
TGGTCGTGCCGAAAGAAACA+AGG 0.616341 1_3:+16162522 Msa0106630:CDS
TTACTGTTCAATGGGGCCAA+GGG 0.617013 1_3:-16162069 None:intergenic
TCATTAAATCCGAAAGCAGA+GGG 0.617997 1_3:+16163230 Msa0106630:CDS
ATGGTGAAGGTGTATGAAGT+GGG 0.619853 1_3:+16160963 Msa0106630:intron
CAAGAAGCGTTTCCTCCAGG+TGG 0.638066 1_3:+16160988 Msa0106630:CDS
AGATAATTAAAACTTCTGAA+AGG 0.639773 1_3:+16163468 Msa0106630:exon
TGAATACTCACTCTAACCAA+GGG 0.640887 1_3:-16160033 None:intergenic
AGCTTCAGCAACAACAACAA+TGG 0.642912 1_3:+16159683 Msa0106630:exon
AACTGGAATTAGGGCTACAG+TGG 0.642915 1_3:+16162719 Msa0106630:CDS
GAAGCGATTGATGATTACAA+AGG 0.660086 1_3:+16159995 Msa0106630:CDS
TTGTTGATGAAGAATGTCAA+GGG 0.663241 1_3:+16162769 Msa0106630:CDS
ATTTGCGATATCTCAAAGTG+TGG 0.664209 1_3:+16161085 Msa0106630:CDS
ATTCTTCATCAACAAACACC+GGG 0.674711 1_3:-16162761 None:intergenic
AGAAAGATTACTGCTCAAAG+GGG 0.678568 1_3:-16162112 None:intergenic
AGTTTGAGCCAAGAGTGTGA+CGG 0.680288 1_3:-16162496 None:intergenic
TATCTGGGGAGGCTGCTATG+CGG 0.695957 1_3:-16163450 None:intergenic
CCTGAGCTATCTCCACCTGG+AGG 0.737732 1_3:-16161000 None:intergenic
AGAACCATTACTGTTCAATG+GGG 0.751717 1_3:-16162076 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATTTCAGTTAAAAAATT+AGG + chr1_3:16160331-16160350 Msa0106630:intron 10.0%
!!! AAAAAGCTTAAAATTAATTT+TGG + chr1_3:16160362-16160381 Msa0106630:intron 10.0%
!!! ATTTTCTATTTTTTTATTGA+TGG + chr1_3:16160944-16160963 Msa0106630:intron 10.0%
!! GTATTATATTCAAATAAAAA+TGG - chr1_3:16163115-16163134 None:intergenic 10.0%
!!! TTATAGCCTTTTTAATTTTA+GGG + chr1_3:16160103-16160122 Msa0106630:intron 15.0%
!! AAATAACCCTAAAATTAAAA+AGG - chr1_3:16160112-16160131 None:intergenic 15.0%
!!! TTTAATTTTAGGGTTATTTT+AGG + chr1_3:16160113-16160132 Msa0106630:intron 15.0%
!!! TGATATGATTTTGAATTTTT+AGG + chr1_3:16160161-16160180 Msa0106630:intron 15.0%
!!! TGATTATGTAAAATTGATTT+TGG + chr1_3:16160650-16160669 Msa0106630:intron 15.0%
!!! TTTCATTTTTGCATTAATTA+TGG + chr1_3:16161509-16161528 Msa0106630:intron 15.0%
!!! ATATTATAAAATTTTGGAAG+AGG - chr1_3:16161836-16161855 None:intergenic 15.0%
!! TTTGAAAAATGAAGTATATA+TGG - chr1_3:16162240-16162259 None:intergenic 15.0%
!!! TTTTCATTATTAAATCTTGT+AGG + chr1_3:16162401-16162420 Msa0106630:intron 15.0%
!!! ATATTTTAAACCCATTTTTA+AGG - chr1_3:16163019-16163038 None:intergenic 15.0%
!! TTATATTCAAATAAAAATGG+CGG - chr1_3:16163112-16163131 None:intergenic 15.0%
!! ATAAAATGATGTATATGTTT+AGG - chr1_3:16163360-16163379 None:intergenic 15.0%
!!! CATTTAAATTGATGAGTTTT+TGG + chr1_3:16159954-16159973 Msa0106630:intron 20.0%
!!! GTTATAGCCTTTTTAATTTT+AGG + chr1_3:16160102-16160121 Msa0106630:intron 20.0%
!!! TTTTAGGATATTGTTGATTT+AGG + chr1_3:16160129-16160148 Msa0106630:intron 20.0%
!!! AAGCTTAAAATTAATTTTGG+AGG + chr1_3:16160365-16160384 Msa0106630:intron 20.0%
!!! CAATTTTACACAATCAATTA+TGG + chr1_3:16160434-16160453 Msa0106630:intron 20.0%
!!! AGAGTAAAATGTTTTATGTT+TGG + chr1_3:16160687-16160706 Msa0106630:intron 20.0%
!! CTATTATAAATCAAATCTAG+AGG + chr1_3:16160750-16160769 Msa0106630:intron 20.0%
!! TGTTATTATAAACCTATGTT+TGG - chr1_3:16160910-16160929 None:intergenic 20.0%
!!! TATTTTTTTATTGATGGTGA+AGG + chr1_3:16160950-16160969 Msa0106630:intron 20.0%
!! AATTAACAGTTAACAAACAA+AGG - chr1_3:16161135-16161154 None:intergenic 20.0%
!!! GGAAGTTATATATTCTTTTT+TGG + chr1_3:16161242-16161261 Msa0106630:CDS 20.0%
!! AAGATAAGAATTTCATTACA+AGG - chr1_3:16161413-16161432 None:intergenic 20.0%
!! GGTTTCAATTTATACAAATT+TGG + chr1_3:16161571-16161590 Msa0106630:intron 20.0%
!! CAATTTATACAAATTTGGAA+AGG + chr1_3:16161576-16161595 Msa0106630:intron 20.0%
!!! CTAAATATTCTATTTTGCTA+TGG + chr1_3:16161691-16161710 Msa0106630:intron 20.0%
!! ATGAAGTATATATGGAAATA+AGG - chr1_3:16162232-16162251 None:intergenic 20.0%
!! TATATGAATAATGAGTTTCT+AGG + chr1_3:16162298-16162317 Msa0106630:intron 20.0%
!! AGCATTTGAATCTTTATAAA+TGG - chr1_3:16162446-16162465 None:intergenic 20.0%
!!! TTCAGAAGTTTTAATTATCT+GGG - chr1_3:16163468-16163487 None:intergenic 20.0%
!!! TTTCAGAAGTTTTAATTATC+TGG - chr1_3:16163469-16163488 None:intergenic 20.0%
!! AGATAATTAAAACTTCTGAA+AGG + chr1_3:16163468-16163487 Msa0106630:exon 20.0%
!! TCATTTCATGTAACAATTTA+TGG + chr1_3:16163517-16163536 Msa0106630:three_prime_UTR 20.0%
!! CATTTCATGTAACAATTTAT+GGG + chr1_3:16163518-16163537 Msa0106630:three_prime_UTR 20.0%
! AGATTTCTTGAGGTAATTAT+CGG - chr1_3:16159862-16159881 None:intergenic 25.0%
!!! ATATTGTTGATTTAGGAGAT+TGG + chr1_3:16160136-16160155 Msa0106630:intron 25.0%
! AAAGCAAGTGAAATGTAAAA+TGG + chr1_3:16160268-16160287 Msa0106630:intron 25.0%
! AATGTAAAATGGTCTATGTT+TGG + chr1_3:16160279-16160298 Msa0106630:intron 25.0%
! TTAATGTTCAACTCAAGTTT+GGG - chr1_3:16160314-16160333 None:intergenic 25.0%
! TTTAATGTTCAACTCAAGTT+TGG - chr1_3:16160315-16160334 None:intergenic 25.0%
!!! TTTTTGGCTAAAAGTCATTT+TGG + chr1_3:16160560-16160579 Msa0106630:intron 25.0%
!! GATTTGATTTATAATAGCCT+TGG - chr1_3:16160747-16160766 None:intergenic 25.0%
! TTCAGACTTAAAGCTAATAT+TGG - chr1_3:16160785-16160804 None:intergenic 25.0%
! AGTCTGAATTAATTCTCTAA+AGG + chr1_3:16160797-16160816 Msa0106630:intron 25.0%
!!! AATTTTCCTTGCTTTTAAAC+TGG + chr1_3:16160882-16160901 Msa0106630:intron 25.0%
!! TTTTTGGATGCAAATGAAAT+TGG + chr1_3:16161258-16161277 Msa0106630:CDS 25.0%
! AGCATATGAAATGTAGAAAT+CGG - chr1_3:16161295-16161314 None:intergenic 25.0%
! TGGTTTCTTATCTTATATCT+TGG + chr1_3:16161386-16161405 Msa0106630:intron 25.0%
! CAAAAGGATATAATTGTTCA+AGG + chr1_3:16161535-16161554 Msa0106630:intron 25.0%
! TTGTATAAATTGAAACCACA+TGG - chr1_3:16161568-16161587 None:intergenic 25.0%
! TATTGAGACAAAAAGTAATG+TGG - chr1_3:16162013-16162032 None:intergenic 25.0%
!!! CTGAATATTTTTTGTGTTGT+AGG + chr1_3:16162042-16162061 Msa0106630:intron 25.0%
! ATCTTTCTGTTAAGAATGAT+AGG + chr1_3:16162127-16162146 Msa0106630:CDS 25.0%
!!! ATTGTAGCTTTGGATTTATT+TGG + chr1_3:16162166-16162185 Msa0106630:intron 25.0%
! GAACATATATAAAATGACCT+TGG + chr1_3:16162320-16162339 Msa0106630:intron 25.0%
! GAATCTTTATAAATGGAAAG+TGG - chr1_3:16162439-16162458 None:intergenic 25.0%
! TATAAAGATTCAAATGCTAG+TGG + chr1_3:16162448-16162467 Msa0106630:CDS 25.0%
!!! ATTGTTTTCCTTGTTTCTTT+CGG - chr1_3:16162533-16162552 None:intergenic 25.0%
! TTTGCTAACACCTTAAAAAT+GGG + chr1_3:16163006-16163025 Msa0106630:intron 25.0%
!!! TCAGAAGTTTTAATTATCTG+GGG - chr1_3:16163467-16163486 None:intergenic 25.0%
! ATAATCAGTTTGTACTTGTA+TGG + chr1_3:16163630-16163649 Msa0106630:three_prime_UTR 25.0%
!!! TGAATGCAATTCTTTTTAGT+TGG + chr1_3:16163715-16163734 Msa0106630:three_prime_UTR 25.0%
! TTCTTTGAAAGTTTCCCATT+CGG - chr1_3:16159775-16159794 None:intergenic 30.0%
GTTGAATAAGAGATTTCTTG+AGG - chr1_3:16159872-16159891 None:intergenic 30.0%
TGTTACTAATTGTATCGCAT+CGG + chr1_3:16160064-16160083 Msa0106630:intron 30.0%
!!! TTGAATTTTTAGGACCTGAT+TGG + chr1_3:16160171-16160190 Msa0106630:intron 30.0%
TCATATGTGAAACCAAACAT+AGG + chr1_3:16160462-16160481 Msa0106630:intron 30.0%
! GCAAGGAAAATTGATTCTAA+AGG - chr1_3:16160874-16160893 None:intergenic 30.0%
TTTAAACTGGAACCAAACAT+AGG + chr1_3:16160895-16160914 Msa0106630:intron 30.0%
!!! TTTGCTGTTTTGATTTTGAG+TGG + chr1_3:16161165-16161184 Msa0106630:intron 30.0%
! GAGATGTTGTTATTGTTTAC+AGG + chr1_3:16161200-16161219 Msa0106630:intron 30.0%
GCATTAATTATGGATGCAAA+AGG + chr1_3:16161519-16161538 Msa0106630:intron 30.0%
GGAACTTAGGCTTAAAATTT+GGG - chr1_3:16161628-16161647 None:intergenic 30.0%
TGGAACTTAGGCTTAAAATT+TGG - chr1_3:16161629-16161648 None:intergenic 30.0%
ACAAAAGCTATAGATGTATG+TGG + chr1_3:16161796-16161815 Msa0106630:intron 30.0%
AATGTGGAGAGAATTGAAAA+GGG - chr1_3:16161997-16162016 None:intergenic 30.0%
TAATGTGGAGAGAATTGAAA+AGG - chr1_3:16161998-16162017 None:intergenic 30.0%
TAAATCCAAAGCTACAATAC+TGG - chr1_3:16162164-16162183 None:intergenic 30.0%
AACAAGAAGAGGAAGAAATA+AGG - chr1_3:16162201-16162220 None:intergenic 30.0%
!!! TTCTTCCTCTTCTTGTTTTT+TGG + chr1_3:16162204-16162223 Msa0106630:intron 30.0%
ATTGGAATTTCACAATTCCA+AGG - chr1_3:16162340-16162359 None:intergenic 30.0%
! TTAAAGGATTTCCATTTTGC+AGG - chr1_3:16162562-16162581 None:intergenic 30.0%
TGCAAAATGGAAATCCTTTA+AGG + chr1_3:16162561-16162580 Msa0106630:CDS 30.0%
ATCATCGATCAATCTTGAAA+AGG - chr1_3:16162622-16162641 None:intergenic 30.0%
CAATGTTTCTTAATGCTTTC+AGG + chr1_3:16162686-16162705 Msa0106630:intron 30.0%
! TTTGTTGATGAAGAATGTCA+AGG + chr1_3:16162768-16162787 Msa0106630:CDS 30.0%
! TTGTTGATGAAGAATGTCAA+GGG + chr1_3:16162769-16162788 Msa0106630:CDS 30.0%
!! TTTCACTTTTATAGCCTGTT+TGG + chr1_3:16162869-16162888 Msa0106630:intron 30.0%
ACTCTACAAATTAGAGCTTA+GGG - chr1_3:16162932-16162951 None:intergenic 30.0%
AACTCTACAAATTAGAGCTT+AGG - chr1_3:16162933-16162952 None:intergenic 30.0%
! TAAGCTCTAATTTGTAGAGT+TGG + chr1_3:16162932-16162951 Msa0106630:intron 30.0%
! AAGCTCTAATTTGTAGAGTT+GGG + chr1_3:16162933-16162952 Msa0106630:intron 30.0%
! GTTTGCTAACACCTTAAAAA+TGG + chr1_3:16163005-16163024 Msa0106630:intron 30.0%
ACTGTAAAACACAATGTGAT+AGG - chr1_3:16163210-16163229 None:intergenic 30.0%
!!! CATGTGTTTTTTGCTTGTAT+TGG + chr1_3:16163565-16163584 Msa0106630:three_prime_UTR 30.0%
GCTCTTCCAAAATTCATAGT+TGG + chr1_3:16159641-16159660 Msa0106630:five_prime_UTR 35.0%
! CGTGTTCCAACTATGAATTT+TGG - chr1_3:16159650-16159669 None:intergenic 35.0%
! TCTAGCATTGAAGAGAGAAA+CGG + chr1_3:16159746-16159765 Msa0106630:CDS 35.0%
GGTTGAGAATGTTAACGTTA+CGG - chr1_3:16159821-16159840 None:intergenic 35.0%
AATCTCTTATTCAACAGCGA+AGG + chr1_3:16159877-16159896 Msa0106630:CDS 35.0%
! GAAGCGATTGATGATTACAA+AGG + chr1_3:16159995-16160014 Msa0106630:CDS 35.0%
TGAATACTCACTCTAACCAA+GGG - chr1_3:16160036-16160055 None:intergenic 35.0%
ATGAATACTCACTCTAACCA+AGG - chr1_3:16160037-16160056 None:intergenic 35.0%
GATACAGTGAATATCCAATC+AGG - chr1_3:16160188-16160207 None:intergenic 35.0%
TTGGATATTCACTGTATCCT+TGG + chr1_3:16160190-16160209 Msa0106630:intron 35.0%
GTAAAACCTAAGCCTATGTT+TGG - chr1_3:16160603-16160622 None:intergenic 35.0%
! TGAGTTGAATGTGTTAACCA+AGG + chr1_3:16160727-16160746 Msa0106630:intron 35.0%
TTGGTTCCAGTTTAAAAGCA+AGG - chr1_3:16160891-16160910 None:intergenic 35.0%
ATTTGCGATATCTCAAAGTG+TGG + chr1_3:16161085-16161104 Msa0106630:CDS 35.0%
GGCAGAAAATTGCTTTGATA+AGG + chr1_3:16161221-16161240 Msa0106630:intron 35.0%
AAAACATTTGACACTTTCGC+TGG - chr1_3:16161491-16161510 None:intergenic 35.0%
! ATACGTGTGTGCATTTGTTA+TGG + chr1_3:16161602-16161621 Msa0106630:intron 35.0%
! TAAGGTATCTCATGGAACTT+AGG - chr1_3:16161641-16161660 None:intergenic 35.0%
! TCATCAACTAAGGTATCTCA+TGG - chr1_3:16161649-16161668 None:intergenic 35.0%
GTGATATGACTCATCAACTA+AGG - chr1_3:16161659-16161678 None:intergenic 35.0%
!! GCAGCTTTCAGTTTTTCAAT+GGG - chr1_3:16161742-16161761 None:intergenic 35.0%
!! TGCAGCTTTCAGTTTTTCAA+TGG - chr1_3:16161743-16161762 None:intergenic 35.0%
ATGTGGAGAGAATTGAAAAG+GGG - chr1_3:16161996-16162015 None:intergenic 35.0%
AGAACCATTACTGTTCAATG+GGG - chr1_3:16162079-16162098 None:intergenic 35.0%
CAGAACCATTACTGTTCAAT+GGG - chr1_3:16162080-16162099 None:intergenic 35.0%
AGAAAGATTACTGCTCAAAG+GGG - chr1_3:16162115-16162134 None:intergenic 35.0%
CAGAAAGATTACTGCTCAAA+GGG - chr1_3:16162116-16162135 None:intergenic 35.0%
ACAGAAAGATTACTGCTCAA+AGG - chr1_3:16162117-16162136 None:intergenic 35.0%
AGGATCCAAAAAACAAGAAG+AGG - chr1_3:16162212-16162231 None:intergenic 35.0%
! AGAGGTACATTGCATGAAAT+TGG - chr1_3:16162358-16162377 None:intergenic 35.0%
AATTTCATGCAATGTACCTC+TGG + chr1_3:16162357-16162376 Msa0106630:intron 35.0%
ATTTCATGCAATGTACCTCT+GGG + chr1_3:16162358-16162377 Msa0106630:intron 35.0%
ATTAAAACTGAGAAACCCAG+AGG - chr1_3:16162376-16162395 None:intergenic 35.0%
ACAATGCAATTCCTGCAAAA+TGG + chr1_3:16162548-16162567 Msa0106630:CDS 35.0%
AAAAGGCAGGAAAAAGAAAG+AGG - chr1_3:16162605-16162624 None:intergenic 35.0%
ATTCTTCATCAACAAACACC+GGG - chr1_3:16162764-16162783 None:intergenic 35.0%
CATTCTTCATCAACAAACAC+CGG - chr1_3:16162765-16162784 None:intergenic 35.0%
! GTAAGTTGAATCACTTTGCA+AGG + chr1_3:16162791-16162810 Msa0106630:intron 35.0%
GTGAAAGAGAAAAACAGACT+AGG - chr1_3:16162855-16162874 None:intergenic 35.0%
TTATAGCCTGTTTGGTTAAG+CGG + chr1_3:16162877-16162896 Msa0106630:intron 35.0%
ACATCAATCTGATCCTTCTT+TGG + chr1_3:16163053-16163072 Msa0106630:intron 35.0%
ATGGTAAAGCTTTCCAAAGA+AGG - chr1_3:16163069-16163088 None:intergenic 35.0%
!!! GCGTGTTGTTGGATTTTTTA+TGG + chr1_3:16163170-16163189 Msa0106630:intron 35.0%
TTCATTAAATCCGAAAGCAG+AGG + chr1_3:16163229-16163248 Msa0106630:CDS 35.0%
TCATTAAATCCGAAAGCAGA+GGG + chr1_3:16163230-16163249 Msa0106630:CDS 35.0%
AGTCCTCAAATTTGAAGACT+AGG + chr1_3:16163255-16163274 Msa0106630:CDS 35.0%
! TTGCCTAGTCTTCAAATTTG+AGG - chr1_3:16163261-16163280 None:intergenic 35.0%
GATTTCTGTCATATCAGAGA+GGG - chr1_3:16163332-16163351 None:intergenic 35.0%
AGATTTCTGTCATATCAGAG+AGG - chr1_3:16163333-16163352 None:intergenic 35.0%
!!! GAAGTTTTAATTATCTGGGG+AGG - chr1_3:16163464-16163483 None:intergenic 35.0%
AGCTTCAGCAACAACAACAA+TGG + chr1_3:16159683-16159702 Msa0106630:exon 40.0%
AATGCTAGAAACTCTGTCTC+TGG - chr1_3:16159735-16159754 None:intergenic 40.0%
! CTAGCATTGAAGAGAGAAAC+GGG + chr1_3:16159747-16159766 Msa0106630:CDS 40.0%
! AACGTGAGACCTTTGAAAAG+AGG + chr1_3:16159795-16159814 Msa0106630:CDS 40.0%
! TTTTTGCCTCTGTAGAACCA+AGG - chr1_3:16160210-16160229 None:intergenic 40.0%
GTGAAACCAAACATAGGCTT+AGG + chr1_3:16160468-16160487 Msa0106630:intron 40.0%
GAGAAACCTAAGCCTATGTT+TGG - chr1_3:16160477-16160496 None:intergenic 40.0%
! CCTATGTTTGGTTCCACATT+TGG - chr1_3:16160591-16160610 None:intergenic 40.0%
CCAAATGTGGAACCAAACAT+AGG + chr1_3:16160588-16160607 Msa0106630:intron 40.0%
! ATGGTGAAGGTGTATGAAGT+GGG + chr1_3:16160963-16160982 Msa0106630:intron 40.0%
AAAGTGTGGCTCGAATATGT+AGG + chr1_3:16161099-16161118 Msa0106630:intron 40.0%
AAGTGTGGCTCGAATATGTA+GGG + chr1_3:16161100-16161119 Msa0106630:intron 40.0%
CATTTCATATGCTTCGCACT+TGG + chr1_3:16161302-16161321 Msa0106630:CDS 40.0%
GCTAACCAGACATTTGAACT+TGG + chr1_3:16161348-16161367 Msa0106630:CDS 40.0%
CTATGCCAAGTTCAAATGTC+TGG - chr1_3:16161356-16161375 None:intergenic 40.0%
CATTTGAACTTGGCATAGCT+AGG + chr1_3:16161358-16161377 Msa0106630:CDS 40.0%
TTTCGCTGGAGTTATTCAAC+TGG - chr1_3:16161477-16161496 None:intergenic 40.0%
GTTCAAGGTTTATGTCCATG+TGG + chr1_3:16161550-16161569 Msa0106630:intron 40.0%
GTTGAGCATTCCTGCAAAAA+TGG - chr1_3:16161720-16161739 None:intergenic 40.0%
TTCTTGTACGCTCAATGTCA+AGG + chr1_3:16161773-16161792 Msa0106630:CDS 40.0%
CTAGGTAGCAGAAGAAATGA+GGG - chr1_3:16161899-16161918 None:intergenic 40.0%
TGTGGAGAGAATTGAAAAGG+GGG - chr1_3:16161995-16162014 None:intergenic 40.0%
GCAGAACCATTACTGTTCAA+TGG - chr1_3:16162081-16162100 None:intergenic 40.0%
CCAAAGCTACAATACTGGTA+GGG - chr1_3:16162159-16162178 None:intergenic 40.0%
TCCAAAGCTACAATACTGGT+AGG - chr1_3:16162160-16162179 None:intergenic 40.0%
CAGGAAAAAGAAAGAGGACT+AGG - chr1_3:16162599-16162618 None:intergenic 40.0%
TCGATCAATCTTGAAAAGGC+AGG - chr1_3:16162618-16162637 None:intergenic 40.0%
TGCCATGGAGGTTACAATTT+GGG - chr1_3:16162825-16162844 None:intergenic 40.0%
ATTAGAGCTTAGGGAACGTA+GGG - chr1_3:16162923-16162942 None:intergenic 40.0%
AATTAGAGCTTAGGGAACGT+AGG - chr1_3:16162924-16162943 None:intergenic 40.0%
ACGACGAAAAGGACTTCAAA+AGG + chr1_3:16163282-16163301 Msa0106630:CDS 40.0%
GAAGAGAAACCGAGTTACTA+AGG + chr1_3:16163406-16163425 Msa0106630:intron 40.0%
AGAAACCGAGTTACTAAGGA+AGG + chr1_3:16163410-16163429 Msa0106630:CDS 40.0%
TGGATCCTTCCTTAGTAACT+CGG - chr1_3:16163418-16163437 None:intergenic 40.0%
TGATAGCATGTTGCTGCAAA+GGG - chr1_3:16163500-16163519 None:intergenic 40.0%
ATGATAGCATGTTGCTGCAA+AGG - chr1_3:16163501-16163520 None:intergenic 40.0%
AACACATGTGTAGCTTTCCA+GGG - chr1_3:16163553-16163572 None:intergenic 40.0%
AAACACATGTGTAGCTTTCC+AGG - chr1_3:16163554-16163573 None:intergenic 40.0%
! ACGTTACGGCCTCTTTTCAA+AGG - chr1_3:16159807-16159826 None:intergenic 45.0%
!! CTGTATCCTTGGTTCTACAG+AGG + chr1_3:16160201-16160220 Msa0106630:intron 45.0%
!!! CATTTTGGCTGCTCCAAATG+TGG + chr1_3:16160575-16160594 Msa0106630:intron 45.0%
GTGGAACCAAACATAGGCTT+AGG + chr1_3:16160594-16160613 Msa0106630:intron 45.0%
! GATGGTGAAGGTGTATGAAG+TGG + chr1_3:16160962-16160981 Msa0106630:intron 45.0%
! AGCAATGTGTCCGTGCATTT+TGG + chr1_3:16161040-16161059 Msa0106630:CDS 45.0%
!! TGTCCGTGCATTTTGGCATT+CGG + chr1_3:16161047-16161066 Msa0106630:CDS 45.0%
GTTCCGAATGCCAAAATGCA+CGG - chr1_3:16161053-16161072 None:intergenic 45.0%
!! GTGCATTTTGGCATTCGGAA+CGG + chr1_3:16161052-16161071 Msa0106630:CDS 45.0%
TTGGCATTCGGAACGGTATA+AGG + chr1_3:16161059-16161078 Msa0106630:CDS 45.0%
CCTAGGTAGCAGAAGAAATG+AGG - chr1_3:16161900-16161919 None:intergenic 45.0%
CCTCATTTCTTCTGCTACCT+AGG + chr1_3:16161897-16161916 Msa0106630:intron 45.0%
!!! CTCTTTTTCGACTGGTTCCT+AGG - chr1_3:16161917-16161936 None:intergenic 45.0%
CTAGGAACCAGTCGAAAAAG+AGG + chr1_3:16161915-16161934 Msa0106630:intron 45.0%
! TTTGGAACTCTTCTCGCCAA+GGG + chr1_3:16161952-16161971 Msa0106630:CDS 45.0%
GACCTAACCATTATCTCCCT+TGG - chr1_3:16161971-16161990 None:intergenic 45.0%
TGGAGAGAATTGAAAAGGGG+GGG - chr1_3:16161993-16162012 None:intergenic 45.0%
GTGGAGAGAATTGAAAAGGG+GGG - chr1_3:16161994-16162013 None:intergenic 45.0%
TTACTGTTCAATGGGGCCAA+GGG - chr1_3:16162072-16162091 None:intergenic 45.0%
ATTACTGTTCAATGGGGCCA+AGG - chr1_3:16162073-16162092 None:intergenic 45.0%
TTGGCCCCATTGAACAGTAA+TGG + chr1_3:16162072-16162091 Msa0106630:CDS 45.0%
! TAATGGTTCTGCTAAGCCCT+TGG + chr1_3:16162089-16162108 Msa0106630:CDS 45.0%
CCCTACCAGTATTGTAGCTT+TGG + chr1_3:16162156-16162175 Msa0106630:intron 45.0%
! AGTTTGAGCCAAGAGTGTGA+CGG - chr1_3:16162499-16162518 None:intergenic 45.0%
TCACACTCTTGGCTCAAACT+TGG + chr1_3:16162499-16162518 Msa0106630:CDS 45.0%
GGCGAAAATCAGCACCTTAA+AGG - chr1_3:16162578-16162597 None:intergenic 45.0%
AACTGGAATTAGGGCTACAG+TGG + chr1_3:16162719-16162738 Msa0106630:CDS 45.0%
GTCCCAAATTGTAACCTCCA+TGG + chr1_3:16162820-16162839 Msa0106630:intron 45.0%
GTGCCATGGAGGTTACAATT+TGG - chr1_3:16162826-16162845 None:intergenic 45.0%
! TTTATGGGACAGCTTTTCCC+TGG + chr1_3:16163533-16163552 Msa0106630:three_prime_UTR 45.0%
!!! TTATTTTGTAAATTTTTTTT+TGG + chr1_3:16160544-16160563 Msa0106630:intron 5.0%
!!! ATAATCATATTATAAAATTT+TGG - chr1_3:16161842-16161861 None:intergenic 5.0%
!!! TAAGTTTTTTTAAATAAAAA+TGG - chr1_3:16163088-16163107 None:intergenic 5.0%
AGAGAGAAACGGGAACCGAA+TGG + chr1_3:16159757-16159776 Msa0106630:CDS 50.0%
GAGAGAAACGGGAACCGAAT+GGG + chr1_3:16159758-16159777 Msa0106630:CDS 50.0%
CACTCTAACCAAGGGAGAAG+AGG - chr1_3:16160028-16160047 None:intergenic 50.0%
!! GTTCAAGAAGCGTTTCCTCC+AGG + chr1_3:16160985-16161004 Msa0106630:CDS 50.0%
! CTTGGCATAGCTAGGTACTG+TGG + chr1_3:16161366-16161385 Msa0106630:intron 50.0%
!! GCTATGGCGACCATTTTTGC+AGG + chr1_3:16161707-16161726 Msa0106630:intron 50.0%
!!! ACAGGTGCCTCTTTTTCGAC+TGG - chr1_3:16161925-16161944 None:intergenic 50.0%
AGAGTTCCAAAGCTACGCAC+AGG - chr1_3:16161943-16161962 None:intergenic 50.0%
!! CTTTGGAACTCTTCTCGCCA+AGG + chr1_3:16161951-16161970 Msa0106630:CDS 50.0%
CTTCTCGCCAAGGGAGATAA+TGG + chr1_3:16161961-16161980 Msa0106630:CDS 50.0%
! CGCCAAGGGAGATAATGGTT+AGG + chr1_3:16161966-16161985 Msa0106630:intron 50.0%
TTACTGCTCAAAGGGGCCAA+GGG - chr1_3:16162108-16162127 None:intergenic 50.0%
ATTACTGCTCAAAGGGGCCA+AGG - chr1_3:16162109-16162128 None:intergenic 50.0%
! GTTTGAGCCAAGAGTGTGAC+GGG - chr1_3:16162498-16162517 None:intergenic 50.0%
CACTCTTGGCTCAAACTTGG+TGG + chr1_3:16162502-16162521 Msa0106630:CDS 50.0%
TGGTCGTGCCGAAAGAAACA+AGG + chr1_3:16162522-16162541 Msa0106630:CDS 50.0%
TCCCACAGCGAACTGGAATT+AGG + chr1_3:16162709-16162728 Msa0106630:CDS 50.0%
CCCTAATTCCAGTTCGCTGT+GGG - chr1_3:16162713-16162732 None:intergenic 50.0%
CCCACAGCGAACTGGAATTA+GGG + chr1_3:16162710-16162729 Msa0106630:CDS 50.0%
GGAATTAGGGCTACAGTGGT+TGG + chr1_3:16162723-16162742 Msa0106630:CDS 50.0%
ATCAACAAACACCGGGATGC+AGG - chr1_3:16162757-16162776 None:intergenic 50.0%
AGACTAGGTGCATAGTGCCA+TGG - chr1_3:16162840-16162859 None:intergenic 50.0%
GCATCACCGCTTAACCAAAC+AGG - chr1_3:16162886-16162905 None:intergenic 50.0%
!! TTGCTGTTTGCGCGTGTTGT+TGG + chr1_3:16163159-16163178 Msa0106630:intron 50.0%
GAGGACTTACCCTCTGCTTT+CGG - chr1_3:16163242-16163261 None:intergenic 50.0%
GACTAGGCAAGACGACGAAA+AGG + chr1_3:16163271-16163290 Msa0106630:CDS 50.0%
CTATGCGGGAAGTTGCGTAA+TGG - chr1_3:16163438-16163457 None:intergenic 50.0%
CGGTGTGACACTTGAGAGCA+TGG - chr1_3:16159842-16159861 None:intergenic 55.0%
GCGAAGATCCTCTTCTCCCT+TGG + chr1_3:16160017-16160036 Msa0106630:CDS 55.0%
!! CAAGAAGCGTTTCCTCCAGG+TGG + chr1_3:16160988-16161007 Msa0106630:CDS 55.0%
CTCCAGGTGGAGATAGCTCA+GGG + chr1_3:16161001-16161020 Msa0106630:CDS 55.0%
TTGTGTTGTAGGTGCGCCCT+TGG + chr1_3:16162053-16162072 Msa0106630:intron 55.0%
ATCCAGACCCGTCACACTCT+TGG + chr1_3:16162488-16162507 Msa0106630:CDS 55.0%
! TTTCAGGTCCCACAGCGAAC+TGG + chr1_3:16162702-16162721 Msa0106630:intron 55.0%
GCCCTAATTCCAGTTCGCTG+TGG - chr1_3:16162714-16162733 None:intergenic 55.0%
CTAGGTGCATAGTGCCATGG+AGG - chr1_3:16162837-16162856 None:intergenic 55.0%
TATCTGGGGAGGCTGCTATG+CGG - chr1_3:16163453-16163472 None:intergenic 55.0%
CCTGAGCTATCTCCACCTGG+AGG - chr1_3:16161003-16161022 None:intergenic 60.0%
CCTCCAGGTGGAGATAGCTC+AGG + chr1_3:16161000-16161019 Msa0106630:CDS 60.0%
AGCCCTGAGCTATCTCCACC+TGG - chr1_3:16161006-16161025 None:intergenic 60.0%
AGGTGGAGATAGCTCAGGGC+TGG + chr1_3:16161005-16161024 Msa0106630:CDS 60.0%
TGGAGATAGCTCAGGGCTGG+TGG + chr1_3:16161008-16161027 Msa0106630:CDS 60.0%
! GAGGCACCTGTGCGTAGCTT+TGG + chr1_3:16161934-16161953 Msa0106630:CDS 60.0%
!! GTGACGGGTCTGGATGAGGT+GGG - chr1_3:16162483-16162502 None:intergenic 60.0%
!! TGTGACGGGTCTGGATGAGG+TGG - chr1_3:16162484-16162503 None:intergenic 60.0%
!! GAGTGTGACGGGTCTGGATG+AGG - chr1_3:16162487-16162506 None:intergenic 60.0%
!! AGCCAAGAGTGTGACGGGTC+TGG - chr1_3:16162493-16162512 None:intergenic 60.0%
TGGTGCAAGTGCCTGCATCC+CGG + chr1_3:16162743-16162762 Msa0106630:CDS 60.0%
ATCTGGGGAGGCTGCTATGC+GGG - chr1_3:16163452-16163471 None:intergenic 60.0%
CGGGTCTGGATGAGGTGGGC+AGG - chr1_3:16162479-16162498 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 16159634 16163765 16159634 ID=Msa0106630;Name=Msa0106630
chr1_3 mRNA 16159634 16163765 16159634 ID=Msa0106630-mRNA-1;Parent=Msa0106630;Name=Msa0106630-mRNA-1;_AED=0.10;_eAED=0.10;_QI=68|1|1|1|1|1|11|292|390
chr1_3 exon 16159634 16159898 16159634 ID=Msa0106630-mRNA-1:exon:6103;Parent=Msa0106630-mRNA-1
chr1_3 exon 16159985 16160044 16159985 ID=Msa0106630-mRNA-1:exon:6104;Parent=Msa0106630-mRNA-1
chr1_3 exon 16160972 16161116 16160972 ID=Msa0106630-mRNA-1:exon:6105;Parent=Msa0106630-mRNA-1
chr1_3 exon 16161222 16161379 16161222 ID=Msa0106630-mRNA-1:exon:6106;Parent=Msa0106630-mRNA-1
chr1_3 exon 16161729 16161810 16161729 ID=Msa0106630-mRNA-1:exon:6107;Parent=Msa0106630-mRNA-1
chr1_3 exon 16161919 16161982 16161919 ID=Msa0106630-mRNA-1:exon:6108;Parent=Msa0106630-mRNA-1
chr1_3 exon 16162064 16162148 16162064 ID=Msa0106630-mRNA-1:exon:6109;Parent=Msa0106630-mRNA-1
chr1_3 exon 16162423 16162582 16162423 ID=Msa0106630-mRNA-1:exon:6110;Parent=Msa0106630-mRNA-1
chr1_3 exon 16162708 16162790 16162708 ID=Msa0106630-mRNA-1:exon:6111;Parent=Msa0106630-mRNA-1
chr1_3 exon 16163229 16163303 16163229 ID=Msa0106630-mRNA-1:exon:6112;Parent=Msa0106630-mRNA-1
chr1_3 exon 16163410 16163765 16163410 ID=Msa0106630-mRNA-1:exon:6113;Parent=Msa0106630-mRNA-1
chr1_3 five_prime_UTR 16159634 16159701 16159634 ID=Msa0106630-mRNA-1:five_prime_utr;Parent=Msa0106630-mRNA-1
chr1_3 CDS 16159702 16159898 16159702 ID=Msa0106630-mRNA-1:cds;Parent=Msa0106630-mRNA-1
chr1_3 CDS 16159985 16160044 16159985 ID=Msa0106630-mRNA-1:cds;Parent=Msa0106630-mRNA-1
chr1_3 CDS 16160972 16161116 16160972 ID=Msa0106630-mRNA-1:cds;Parent=Msa0106630-mRNA-1
chr1_3 CDS 16161222 16161379 16161222 ID=Msa0106630-mRNA-1:cds;Parent=Msa0106630-mRNA-1
chr1_3 CDS 16161729 16161810 16161729 ID=Msa0106630-mRNA-1:cds;Parent=Msa0106630-mRNA-1
chr1_3 CDS 16161919 16161982 16161919 ID=Msa0106630-mRNA-1:cds;Parent=Msa0106630-mRNA-1
chr1_3 CDS 16162064 16162148 16162064 ID=Msa0106630-mRNA-1:cds;Parent=Msa0106630-mRNA-1
chr1_3 CDS 16162423 16162582 16162423 ID=Msa0106630-mRNA-1:cds;Parent=Msa0106630-mRNA-1
chr1_3 CDS 16162708 16162790 16162708 ID=Msa0106630-mRNA-1:cds;Parent=Msa0106630-mRNA-1
chr1_3 CDS 16163229 16163303 16163229 ID=Msa0106630-mRNA-1:cds;Parent=Msa0106630-mRNA-1
chr1_3 CDS 16163410 16163473 16163410 ID=Msa0106630-mRNA-1:cds;Parent=Msa0106630-mRNA-1
chr1_3 three_prime_UTR 16163474 16163765 16163474 ID=Msa0106630-mRNA-1:three_prime_utr;Parent=Msa0106630-mRNA-1
Gene Sequence

>Msa0106630

ATGGCAGAGATTGAAACGCAGAAGATAGATCCAGAGACAGAGTTTCTAGCATTGAAGAGAGAAACGGGAACCGAATGGGAAACTTTCAAAGAAAACGTGAGACCTTTGAAAAGAGGCCGTAACGTTAACATTCTCAACCATGCTCTCAAGTGTCACACCGATAATTACCTCAAGAAATCTCTTATTCAACAGCGAAGAAAACTTAGTGAAGCGATTGATGATTACAAAGGCGAAGATCCTCTTCTCCCTTGGTTAGAGTGTATGAAGTGGGTTCAAGAAGCGTTTCCTCCAGGTGGAGATAGCTCAGGGCTGGTGGTGATTTATGAGCAATGTGTCCGTGCATTTTGGCATTCGGAACGGTATAAGGAAGATTTGCGATATCTCAAAGTGTGGCTCGAATATGCAGAAAATTGCTTTGATAAGGAAGTTATATATTCTTTTTTGGATGCAAATGAAATTGGAAAAACTCATTCCGATTTCTACATTTCATATGCTTCGCACTTGGAATCTAAGAACAAGTTTAAAGCTGCTAACCAGACATTTGAACTTGGCATAGCTAGGAATGCTCAACCCATTGAAAAACTGAAAGCTGCATATAGAAAATTTCTTGTACGCTCAATGTCAAGGACAAAAGCTATAGATGAACCAGTCGAAAAAGAGGCACCTGTGCGTAGCTTTGGAACTCTTCTCGCCAAGGGAGATAATGGTGCGCCCTTGGCCCCATTGAACAGTAATGGTTCTGCTAAGCCCTTGGCCCCTTTGAGCAGTAATCTTTCTGTTAAGAATGATAGGACTCGAGCAGCTCCACTTTCCATTTATAAAGATTCAAATGCTAGTGGTGAGACCTGCCCACCTCATCCAGACCCGTCACACTCTTGGCTCAAACTTGGTGGTCGTGCCGAAAGAAACAAGGAAAACAATGCAATTCCTGCAAAATGGAAATCCTTTAAGGTCCCACAGCGAACTGGAATTAGGGCTACAGTGGTTGGTGCAAGTGCCTGCATCCCGGTGTTTGTTGATGAAGAATGTCAAGGTTCATTAAATCCGAAAGCAGAGGGTAAGTCCTCAAATTTGAAGACTAGGCAAGACGACGAAAAGGACTTCAAAAGAGAAACCGAGTTACTAAGGAAGGATCCATTACGCAACTTCCCGCATAGCAGCCTCCCCAGATAA

Protein sequence

>Msa0106630

MAEIETQKIDPETEFLALKRETGTEWETFKENVRPLKRGRNVNILNHALKCHTDNYLKKSLIQQRRKLSEAIDDYKGEDPLLPWLECMKWVQEAFPPGGDSSGLVVIYEQCVRAFWHSERYKEDLRYLKVWLEYAENCFDKEVIYSFLDANEIGKTHSDFYISYASHLESKNKFKAANQTFELGIARNAQPIEKLKAAYRKFLVRSMSRTKAIDEPVEKEAPVRSFGTLLAKGDNGAPLAPLNSNGSAKPLAPLSSNLSVKNDRTRAAPLSIYKDSNASGETCPPHPDPSHSWLKLGGRAERNKENNAIPAKWKSFKVPQRTGIRATVVGASACIPVFVDEECQGSLNPKAEGKSSNLKTRQDDEKDFKRETELLRKDPLRNFPHSSLPR*