AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0062340


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0062340 MtrunA17_Chr1g0162841 95.897 390 16 0 1 390 1 390 0.0 773
Msa0062340 MtrunA17_Chr3g0113931 34.028 144 94 1 72 215 15 157 3.54e-24 103
Msa0062340 MtrunA17_Chr4g0040351 27.517 149 102 2 57 205 1 143 1.45e-12 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0062340 AT2G33560.2 55.087 403 158 6 2 390 3 396 7.68e-150 429
Msa0062340 AT2G33560.1 55.224 402 158 7 2 390 3 395 1.68e-149 429
Msa0062340 AT5G05510.1 34.028 144 94 1 68 211 15 157 4.91e-22 97.8
Msa0062340 AT2G20635.1 38.519 135 82 1 79 212 11 145 1.64e-19 90.5

Find 109 sgRNAs with CRISPR-Local

Find 278 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATTTCATGTAACAATTTA+TGG 0.081181 1_2:-21670554 Msa0062340:three_prime_UTR
TGCAAAATGGAAATCCTTTA+AGG 0.118247 1_2:-21671510 Msa0062340:intron
AGCATTTGAATCTTTATAAA+TGG 0.182533 1_2:+21671628 None:intergenic
GGCGAAAATCAGCACCTTAA+AGG 0.243628 1_2:+21671496 None:intergenic
CGTGTTCCAACTATGAATTT+TGG 0.294547 1_2:+21674446 None:intergenic
ACAATGCAATTCCTGCAAAA+TGG 0.312255 1_2:-21671523 Msa0062340:CDS
TTGGCATTCGGAACGGTATA+AGG 0.315818 1_2:-21673011 Msa0062340:CDS
CATTTCATGTAACAATTTAT+GGG 0.315985 1_2:-21670553 Msa0062340:three_prime_UTR
CCCACAGCGAACTGGAATTA+TGG 0.328074 1_2:-21671361 Msa0062340:CDS
AGCAATGTGTCCGTGCATTT+TGG 0.329337 1_2:-21673030 Msa0062340:CDS
GAGGACTTACCCTCTGCTTT+CGG 0.357727 1_2:+21670832 None:intergenic
ATAATCAGTTTGTACTTGTA+TGG 0.359054 1_2:-21670440 Msa0062340:three_prime_UTR
CTTCTCGCCAAGGGAGATAA+TGG 0.383418 1_2:-21672117 Msa0062340:intron
GGCAGAAAATTGCTTTGATA+AGG 0.384613 1_2:-21672856 Msa0062340:CDS
AGATTTCTTGAGGTAATTAT+CGG 0.385309 1_2:+21674213 None:intergenic
GAGGCACCTGTGCGTAGCTT+TGG 0.395057 1_2:-21672144 Msa0062340:CDS
TTGCCTAGTCTTCAAATTTG+AGG 0.403651 1_2:+21670813 None:intergenic
TTCTTTGAAAGTTTCCCATT+CGG 0.413014 1_2:+21674300 None:intergenic
AGCATATGAAATGTAGAAAT+CGG 0.414170 1_2:+21672785 None:intergenic
CAGAAAGATTACTGCTCAAA+GGG 0.419258 1_2:+21671958 None:intergenic
ATCTTTCTGTTAAGAATGAT+AGG 0.426195 1_2:-21671944 Msa0062340:intron
CAGAACGATTACTGTTCAAT+GGG 0.434609 1_2:+21671994 None:intergenic
GCTCTTCCAAAATTCATAGT+TGG 0.438635 1_2:-21674452 Msa0062340:five_prime_UTR
ATCCAGACCCGTCACACTCT+TGG 0.440039 1_2:-21671583 Msa0062340:CDS
CATTTCATATGCTTCGCACT+TGG 0.440560 1_2:-21672775 Msa0062340:CDS
CTATGCCAAGTTCAAATGTC+TGG 0.447120 1_2:+21672724 None:intergenic
CGGGTCTGGATGAGGTGGGC+AGG 0.447626 1_2:+21671595 None:intergenic
GCAGAACGATTACTGTTCAA+TGG 0.449743 1_2:+21671993 None:intergenic
AATGCTAGAAACTCTGTCTC+TGG 0.451174 1_2:+21674340 None:intergenic
CCTCCAGGTGGAGATAGCTC+AGG 0.451234 1_2:-21673070 Msa0062340:CDS
AGCCAAGAGTGTGACGGGTC+TGG 0.456101 1_2:+21671581 None:intergenic
ATCTGGGGAGGCTGCTATGC+GGG 0.457917 1_2:+21670622 None:intergenic
GACTAGGCAAGACGACGAAA+AGG 0.475024 1_2:-21670800 Msa0062340:CDS
CTAGCATTGAAGAGAGAAAC+GGG 0.485326 1_2:-21674325 Msa0062340:CDS
TTTCAGGTCCCACAGCGAAC+TGG 0.488532 1_2:-21671369 Msa0062340:intron
TCTAGCATTGAAGAGAGAAA+CGG 0.489301 1_2:-21674326 Msa0062340:CDS
CACTCTTGGCTCAAACTTGG+TGG 0.494308 1_2:-21671569 Msa0062340:CDS
GAAGAGAAACCGAGTTACTA+AGG 0.496845 1_2:-21670665 Msa0062340:intron
AGGTGGAGATAGCTCAGGGC+TGG 0.499562 1_2:-21673065 Msa0062340:CDS
TCACACTCTTGGCTCAAACT+TGG 0.500855 1_2:-21671572 Msa0062340:CDS
GGTTGAGAATGTTAACGTTA+CGG 0.502066 1_2:+21674254 None:intergenic
GCGAAGATCCTCTTCTCCCT+TGG 0.503308 1_2:-21674055 Msa0062340:CDS
AGTCCTCAAATTTGAAGACT+AGG 0.504667 1_2:-21670816 Msa0062340:CDS
GAATCTTTATAAATGGAAAG+TGG 0.506850 1_2:+21671635 None:intergenic
ACGACGAAAAGGACTTCAAA+AGG 0.511321 1_2:-21670789 Msa0062340:intron
TGATAGCATGTTGCTGCAAA+GGG 0.512872 1_2:+21670574 None:intergenic
CTATGCGGGAAGTTGCGTAA+TGG 0.514966 1_2:+21670636 None:intergenic
GGACTAACCATTATCTCCCT+TGG 0.517175 1_2:+21672110 None:intergenic
ATTACTGCTCAAAGGGGCCA+AGG 0.521220 1_2:+21671965 None:intergenic
TTGTGTTGTAGGTGCGCCCT+TGG 0.521457 1_2:-21672018 Msa0062340:intron
GAGAGAAACGGGAACCGAAT+GGG 0.521715 1_2:-21674314 Msa0062340:CDS
CACTCTAACCAAGGGAGAAG+AGG 0.525625 1_2:+21674047 None:intergenic
TGGATCCTTCCTTAGTAACT+CGG 0.526271 1_2:+21670656 None:intergenic
ACAGAAAGATTACTGCTCAA+AGG 0.527970 1_2:+21671957 None:intergenic
GTTCAAGAAGCGTTTCCTCC+AGG 0.530661 1_2:-21673085 Msa0062340:CDS
AACGTGAGACCTTTGAAAAG+AGG 0.533683 1_2:-21674277 Msa0062340:CDS
ATCAACAAACACCGGGATGC+AGG 0.534208 1_2:+21671317 None:intergenic
GTTTGAGCCAAGAGTGTGAC+GGG 0.542618 1_2:+21671576 None:intergenic
ATTACTGTTCAATGGGGCCA+AGG 0.546177 1_2:+21672001 None:intergenic
GCTAACCAGACATTTGAACT+TGG 0.546783 1_2:-21672729 Msa0062340:CDS
TTTGGAACTCTTCTCGCCAA+GGG 0.546864 1_2:-21672126 Msa0062340:CDS
TAATCGTTCTGCTAAGCCCT+TGG 0.548953 1_2:-21671982 Msa0062340:CDS
GAGTGTGACGGGTCTGGATG+AGG 0.550155 1_2:+21671587 None:intergenic
CTCCAGGTGGAGATAGCTCA+GGG 0.552572 1_2:-21673069 Msa0062340:CDS
GTTGAATAAGAGATTTCTTG+AGG 0.555118 1_2:+21674203 None:intergenic
CATTTGAACTTGGCATAGCT+AGG 0.559506 1_2:-21672719 Msa0062340:intron
AGAAACCGAGTTACTAAGGA+AGG 0.560277 1_2:-21670661 Msa0062340:CDS
TTCTTGTACGCTCAATGTCA+AGG 0.562298 1_2:-21672305 Msa0062340:CDS
TGGAGATAGCTCAGGGCTGG+TGG 0.563908 1_2:-21673062 Msa0062340:CDS
TGTGACGGGTCTGGATGAGG+TGG 0.564742 1_2:+21671590 None:intergenic
CTTTGGAACTCTTCTCGCCA+AGG 0.569504 1_2:-21672127 Msa0062340:CDS
CATTCTTCATCAACAAACAC+CGG 0.569992 1_2:+21671309 None:intergenic
ATGATAGCATGTTGCTGCAA+AGG 0.571911 1_2:+21670573 None:intergenic
TGGTGCAAGTGCCTGCATCC+CGG 0.572563 1_2:-21671328 Msa0062340:CDS
CGGTGTGACACTTGAGAGCA+TGG 0.576550 1_2:+21674233 None:intergenic
ATGAATACTCACTCTAACCA+AGG 0.581627 1_2:+21674038 None:intergenic
AATCTCTTATTCAACAGCGA+AGG 0.583146 1_2:-21674195 Msa0062340:intron
CCATAATTCCAGTTCGCTGT+GGG 0.591530 1_2:+21671361 None:intergenic
TATAAAGATTCAAATGCTAG+TGG 0.592975 1_2:-21671623 Msa0062340:CDS
AGAGAGAAACGGGAACCGAA+TGG 0.595749 1_2:-21674315 Msa0062340:CDS
AGAGTTCCAAAGCTACGCAC+AGG 0.601818 1_2:+21672138 None:intergenic
AGCCCTGAGCTATCTCCACC+TGG 0.603020 1_2:+21673067 None:intergenic
GAAGCGATTGATGATTACAA+AGG 0.603266 1_2:-21674077 Msa0062340:CDS
GGAATTATGGCTACAGTGGT+TGG 0.608793 1_2:-21671348 Msa0062340:CDS
GTTCCGAATGCCAAAATGCA+CGG 0.610220 1_2:+21673020 None:intergenic
GATGGTGAAGGTGTATGAAG+TGG 0.612717 1_2:-21673108 Msa0062340:intron
TTTGTTGATGAAGAATGTCA+AGG 0.612992 1_2:-21671303 Msa0062340:CDS
TTCATTAAATCCGAAAGCAG+AGG 0.613152 1_2:-21670842 Msa0062340:CDS
TTACTGCTCAAAGGGGCCAA+GGG 0.614551 1_2:+21671966 None:intergenic
GTGACGGGTCTGGATGAGGT+GGG 0.615219 1_2:+21671591 None:intergenic
TGGTCGTGCCGAAAGAAACA+AGG 0.616341 1_2:-21671549 Msa0062340:CDS
TTACTGTTCAATGGGGCCAA+GGG 0.617013 1_2:+21672002 None:intergenic
TCATTAAATCCGAAAGCAGA+GGG 0.617997 1_2:-21670841 Msa0062340:CDS
ATGGTGAAGGTGTATGAAGT+GGG 0.619853 1_2:-21673107 Msa0062340:intron
GCCATAATTCCAGTTCGCTG+TGG 0.621959 1_2:+21671360 None:intergenic
CAAGAAGCGTTTCCTCCAGG+TGG 0.638066 1_2:-21673082 Msa0062340:CDS
AGATAATTAAAACTTCTGAA+AGG 0.639773 1_2:-21670603 Msa0062340:exon
TGAATACTCACTCTAACCAA+GGG 0.640887 1_2:+21674039 None:intergenic
AGCTTCAGCAACAACAACAA+TGG 0.642912 1_2:-21674389 Msa0062340:intron
AACTGGAATTATGGCTACAG+TGG 0.646189 1_2:-21671352 Msa0062340:CDS
TTGTTGATGAAGAATGTCAA+GGG 0.663241 1_2:-21671302 Msa0062340:intron
TTCAGCAACAACAACAATGG+CGG 0.663274 1_2:-21674386 Msa0062340:intron
ATTTGCGATATCTCAAAGTG+TGG 0.664209 1_2:-21672985 Msa0062340:CDS
ATTCTTCATCAACAAACACC+GGG 0.674711 1_2:+21671310 None:intergenic
AGAAAGATTACTGCTCAAAG+GGG 0.678568 1_2:+21671959 None:intergenic
AGTTTGAGCCAAGAGTGTGA+CGG 0.680288 1_2:+21671575 None:intergenic
TATCTGGGGAGGCTGCTATG+CGG 0.695957 1_2:+21670621 None:intergenic
CCTGAGCTATCTCCACCTGG+AGG 0.737732 1_2:+21673070 None:intergenic
AGAACGATTACTGTTCAATG+GGG 0.751717 1_2:+21671995 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAGCTTAAAATTAATTT+TGG - chr1_2:21671075-21671094 Msa0062340:intron 10.0%
!!! ATTTTCTATTTTTTTATTGA+TGG - chr1_2:21671660-21671679 Msa0062340:intron 10.0%
!! GTATTATATTCAAATAAAAA+TGG + chr1_2:21673830-21673849 None:intergenic 10.0%
!!! TTATAGCCTTTTTAATTTTA+GGG - chr1_2:21670817-21670836 Msa0062340:CDS 15.0%
!! AAATAACCCTAAAATTAAAA+AGG + chr1_2:21670826-21670845 None:intergenic 15.0%
!!! TTTAATTTTAGGGTTATTTT+AGG - chr1_2:21670827-21670846 Msa0062340:CDS 15.0%
!!! TGATATGATTTTGAATTTTT+AGG - chr1_2:21670875-21670894 Msa0062340:intron 15.0%
!! TAAATTTCAGTTCAAAAATT+AGG - chr1_2:21671044-21671063 Msa0062340:intron 15.0%
!!! TGATTATGTAAAATTGATTT+TGG - chr1_2:21671366-21671385 Msa0062340:CDS 15.0%
!!! TTTCATTTTTGCATTAATTA+TGG - chr1_2:21672217-21672236 Msa0062340:intron 15.0%
!!! ATATTATAAAATTTTGGAAG+AGG + chr1_2:21672544-21672563 None:intergenic 15.0%
!! TTTGAAAAATGAAGTATATA+TGG + chr1_2:21672955-21672974 None:intergenic 15.0%
!!! TTTTCATTATTAAATCTTGT+AGG - chr1_2:21673116-21673135 Msa0062340:intron 15.0%
!!! ATATTTTAAACCCATTTTTA+AGG + chr1_2:21673734-21673753 None:intergenic 15.0%
!! TTATATTCAAATAAAAATGG+CGG + chr1_2:21673827-21673846 None:intergenic 15.0%
!! ATAAAATGATGTATATGTTT+AGG + chr1_2:21674075-21674094 None:intergenic 15.0%
!!! CATTTAAATTGATGAGTTTT+TGG - chr1_2:21670668-21670687 Msa0062340:intron 20.0%
!!! GTTATAGCCTTTTTAATTTT+AGG - chr1_2:21670816-21670835 Msa0062340:CDS 20.0%
!!! TTTTAGGATATTGTTGATTT+AGG - chr1_2:21670843-21670862 Msa0062340:CDS 20.0%
!!! AAATGTAAAATGGTCTATTT+TGG - chr1_2:21670992-21671011 Msa0062340:intron 20.0%
!!! AAGCTTAAAATTAATTTTGG+AGG - chr1_2:21671078-21671097 Msa0062340:intron 20.0%
!!! CAATTTTACACAATCAATTA+TGG - chr1_2:21671150-21671169 Msa0062340:intron 20.0%
!!! AGAGTAAAATGTTTTATGTT+TGG - chr1_2:21671403-21671422 Msa0062340:intron 20.0%
!! CTATTATAAATCAAATCTAG+AGG - chr1_2:21671466-21671485 Msa0062340:intron 20.0%
!! TGTTATTATAAACCTATGTT+TGG + chr1_2:21671626-21671645 None:intergenic 20.0%
!!! TATTTTTTTATTGATGGTGA+AGG - chr1_2:21671666-21671685 Msa0062340:intron 20.0%
!! AATTAACAGTTAACAAACAA+AGG + chr1_2:21671851-21671870 None:intergenic 20.0%
!!! GGAAGTTATATATTCTTTTT+TGG - chr1_2:21671951-21671970 Msa0062340:CDS 20.0%
!! AAGATAAGAATTTCATTACA+AGG + chr1_2:21672122-21672141 None:intergenic 20.0%
!! GGTTTCAATTTATACAAATT+TGG - chr1_2:21672279-21672298 Msa0062340:intron 20.0%
!! CAATTTATACAAATTTGGAA+AGG - chr1_2:21672284-21672303 Msa0062340:intron 20.0%
!!! CTAAATATTCTATTTTGCTA+TGG - chr1_2:21672399-21672418 Msa0062340:intron 20.0%
!! ATGAAGTATATATGGAAATA+AGG + chr1_2:21672947-21672966 None:intergenic 20.0%
!! TATATGAATAATGAGTTTCT+AGG - chr1_2:21673013-21673032 Msa0062340:CDS 20.0%
!! AGCATTTGAATCTTTATAAA+TGG + chr1_2:21673161-21673180 None:intergenic 20.0%
!!! TTCAGAAGTTTTAATTATCT+GGG + chr1_2:21674183-21674202 None:intergenic 20.0%
!!! TTTCAGAAGTTTTAATTATC+TGG + chr1_2:21674184-21674203 None:intergenic 20.0%
!! AGATAATTAAAACTTCTGAA+AGG - chr1_2:21674183-21674202 Msa0062340:intron 20.0%
!! TCATTTCATGTAACAATTTA+TGG - chr1_2:21674232-21674251 Msa0062340:CDS 20.0%
!! CATTTCATGTAACAATTTAT+GGG - chr1_2:21674233-21674252 Msa0062340:CDS 20.0%
! AGATTTCTTGAGGTAATTAT+CGG + chr1_2:21670576-21670595 None:intergenic 25.0%
!!! ATATTGTTGATTTAGGAGAT+TGG - chr1_2:21670850-21670869 Msa0062340:intron 25.0%
! AAAGCAAGTGAAATGTAAAA+TGG - chr1_2:21670982-21671001 Msa0062340:intron 25.0%
! TTAATGTTCAACTCAAGTTT+GGG + chr1_2:21671027-21671046 None:intergenic 25.0%
! TTTAATGTTCAACTCAAGTT+TGG + chr1_2:21671028-21671047 None:intergenic 25.0%
!!! TTTTTGGCTAAAAGTCATTT+TGG - chr1_2:21671276-21671295 Msa0062340:intron 25.0%
!! GATTTGATTTATAATAGCCT+TGG + chr1_2:21671463-21671482 None:intergenic 25.0%
! TTCAGACTTAAAGCTAATAT+TGG + chr1_2:21671501-21671520 None:intergenic 25.0%
!!! AATTTTCCTTGCTTTTAAAC+TGG - chr1_2:21671598-21671617 Msa0062340:CDS 25.0%
!!! TTAATTTGCTTGATTTTGAG+TGG - chr1_2:21671877-21671896 Msa0062340:intron 25.0%
! TAAGAGATGTTATTGTTTAC+AGG - chr1_2:21671909-21671928 Msa0062340:intron 25.0%
!! TTTTTGGATGCAAATGAAAT+TGG - chr1_2:21671967-21671986 Msa0062340:CDS 25.0%
! AGCATATGAAATGTAGAAAT+CGG + chr1_2:21672004-21672023 None:intergenic 25.0%
! TGGTTTCTTATCTTATATCT+TGG - chr1_2:21672095-21672114 Msa0062340:intron 25.0%
! CAAAAGGATATAATTGTTCA+AGG - chr1_2:21672243-21672262 Msa0062340:intron 25.0%
! TTGTATAAATTGAAACCACA+TGG + chr1_2:21672276-21672295 None:intergenic 25.0%
! TATTGAGACAAAAAGTAATG+TGG + chr1_2:21672728-21672747 None:intergenic 25.0%
!!! CTGAATATTTTTTGTGTTGT+AGG - chr1_2:21672757-21672776 Msa0062340:CDS 25.0%
! ATCTTTCTGTTAAGAATGAT+AGG - chr1_2:21672842-21672861 Msa0062340:CDS 25.0%
!!! ATTGTAGCTTTGGATTTATT+TGG - chr1_2:21672881-21672900 Msa0062340:intron 25.0%
! GAACATATATAAAATGACCT+TGG - chr1_2:21673035-21673054 Msa0062340:CDS 25.0%
! GAATCTTTATAAATGGAAAG+TGG + chr1_2:21673154-21673173 None:intergenic 25.0%
! TATAAAGATTCAAATGCTAG+TGG - chr1_2:21673163-21673182 Msa0062340:intron 25.0%
!!! ATTGTTTTCCTTGTTTCTTT+CGG + chr1_2:21673248-21673267 None:intergenic 25.0%
! TTTGCTAACACCTTAAAAAT+GGG - chr1_2:21673721-21673740 Msa0062340:intron 25.0%
!!! TCAGAAGTTTTAATTATCTG+GGG + chr1_2:21674182-21674201 None:intergenic 25.0%
!!! AATGTGTTTTTTGCTTGTAT+TGG - chr1_2:21674281-21674300 Msa0062340:CDS 25.0%
! ATAATCAGTTTGTACTTGTA+TGG - chr1_2:21674346-21674365 Msa0062340:CDS 25.0%
!!! TGAATGCAATTCTTTTTAGT+TGG - chr1_2:21674431-21674450 Msa0062340:five_prime_UTR 25.0%
! TTCTTTGAAAGTTTCCCATT+CGG + chr1_2:21670489-21670508 None:intergenic 30.0%
GTTGAATAAGAGATTTCTTG+AGG + chr1_2:21670586-21670605 None:intergenic 30.0%
TGTTACTAATTGTATCGCAT+CGG - chr1_2:21670778-21670797 Msa0062340:intron 30.0%
!!! TTGAATTTTTAGGACCTGAT+TGG - chr1_2:21670885-21670904 Msa0062340:intron 30.0%
TCATATGTGAAACCAAACAT+AGG - chr1_2:21671178-21671197 Msa0062340:intron 30.0%
! GCAAGGAAAATTGATTCTAA+AGG + chr1_2:21671590-21671609 None:intergenic 30.0%
TTTAAACTGGAACCAAACAT+AGG - chr1_2:21671611-21671630 Msa0062340:CDS 30.0%
GCATTAATTATGGATGCAAA+AGG - chr1_2:21672227-21672246 Msa0062340:intron 30.0%
GGAACTTAGGCTTAAAATTT+GGG + chr1_2:21672336-21672355 None:intergenic 30.0%
TGGAACTTAGGCTTAAAATT+TGG + chr1_2:21672337-21672356 None:intergenic 30.0%
ACAAAAGCTATAGATGTATG+TGG - chr1_2:21672504-21672523 Msa0062340:intron 30.0%
TAAATCCAAAGCTACAATAC+TGG + chr1_2:21672879-21672898 None:intergenic 30.0%
AACAAGAAGAGGAAGAAATA+AGG + chr1_2:21672916-21672935 None:intergenic 30.0%
!!! TTCTTCCTCTTCTTGTTTTT+TGG - chr1_2:21672919-21672938 Msa0062340:intron 30.0%
ATTGGAATTTCACAATTCCA+AGG + chr1_2:21673055-21673074 None:intergenic 30.0%
! TTAAAGGATTTCCATTTTGC+AGG + chr1_2:21673277-21673296 None:intergenic 30.0%
TGCAAAATGGAAATCCTTTA+AGG - chr1_2:21673276-21673295 Msa0062340:intron 30.0%
ATCATCGATCAATCTTGAAA+AGG + chr1_2:21673337-21673356 None:intergenic 30.0%
CAATGTTTCTTAATGCTTTC+AGG - chr1_2:21673401-21673420 Msa0062340:intron 30.0%
! TTTGTTGATGAAGAATGTCA+AGG - chr1_2:21673483-21673502 Msa0062340:intron 30.0%
! TTGTTGATGAAGAATGTCAA+GGG - chr1_2:21673484-21673503 Msa0062340:intron 30.0%
!! TTTCACTTTTATAGCCTGTT+TGG - chr1_2:21673584-21673603 Msa0062340:intron 30.0%
ACTCTACAAATTAGAGCTTA+GGG + chr1_2:21673647-21673666 None:intergenic 30.0%
AACTCTACAAATTAGAGCTT+AGG + chr1_2:21673648-21673667 None:intergenic 30.0%
! TAAGCTCTAATTTGTAGAGT+TGG - chr1_2:21673647-21673666 Msa0062340:intron 30.0%
! AAGCTCTAATTTGTAGAGTT+GGG - chr1_2:21673648-21673667 Msa0062340:intron 30.0%
! GTTTGCTAACACCTTAAAAA+TGG - chr1_2:21673720-21673739 Msa0062340:intron 30.0%
ACTGTAAAACACAATGTGAT+AGG + chr1_2:21673925-21673944 None:intergenic 30.0%
GCTCTTCCAAAATTCATAGT+TGG - chr1_2:21670334-21670353 Msa0062340:three_prime_UTR 35.0%
! CGTGTTCCAACTATGAATTT+TGG + chr1_2:21670343-21670362 None:intergenic 35.0%
! TCTAGCATTGAAGAGAGAAA+CGG - chr1_2:21670460-21670479 Msa0062340:three_prime_UTR 35.0%
GGTTGAGAATGTTAACGTTA+CGG + chr1_2:21670535-21670554 None:intergenic 35.0%
AATCTCTTATTCAACAGCGA+AGG - chr1_2:21670591-21670610 Msa0062340:three_prime_UTR 35.0%
! GAAGCGATTGATGATTACAA+AGG - chr1_2:21670709-21670728 Msa0062340:intron 35.0%
TGAATACTCACTCTAACCAA+GGG + chr1_2:21670750-21670769 None:intergenic 35.0%
ATGAATACTCACTCTAACCA+AGG + chr1_2:21670751-21670770 None:intergenic 35.0%
GATACAGTGAATATCCAATC+AGG + chr1_2:21670902-21670921 None:intergenic 35.0%
TTGGATATTCACTGTATCCT+TGG - chr1_2:21670904-21670923 Msa0062340:intron 35.0%
GTAAAACCTAAGCCTATGTT+TGG + chr1_2:21671319-21671338 None:intergenic 35.0%
! TGAGTTGAATGTGTTAACCA+AGG - chr1_2:21671443-21671462 Msa0062340:intron 35.0%
TTGGTTCCAGTTTAAAAGCA+AGG + chr1_2:21671607-21671626 None:intergenic 35.0%
ATTTGCGATATCTCAAAGTG+TGG - chr1_2:21671801-21671820 Msa0062340:intron 35.0%
GGCAGAAAATTGCTTTGATA+AGG - chr1_2:21671930-21671949 Msa0062340:intron 35.0%
AAAACATTTGACACTTTCGC+TGG + chr1_2:21672199-21672218 None:intergenic 35.0%
! ATACGTGTGTGCATTTGTTA+TGG - chr1_2:21672310-21672329 Msa0062340:CDS 35.0%
! TAAGGTATCTCATGGAACTT+AGG + chr1_2:21672349-21672368 None:intergenic 35.0%
! TCATCAACTAAGGTATCTCA+TGG + chr1_2:21672357-21672376 None:intergenic 35.0%
GTGATATGACTCATCAACTA+AGG + chr1_2:21672367-21672386 None:intergenic 35.0%
!! GCAGCTTTCAGTTTTTCAAT+GGG + chr1_2:21672450-21672469 None:intergenic 35.0%
!! TGCAGCTTTCAGTTTTTCAA+TGG + chr1_2:21672451-21672470 None:intergenic 35.0%
TAATGTGGAGAGAATTGAAG+GGG + chr1_2:21672713-21672732 None:intergenic 35.0%
GTAATGTGGAGAGAATTGAA+GGG + chr1_2:21672714-21672733 None:intergenic 35.0%
AGTAATGTGGAGAGAATTGA+AGG + chr1_2:21672715-21672734 None:intergenic 35.0%
AGAACGATTACTGTTCAATG+GGG + chr1_2:21672794-21672813 None:intergenic 35.0%
CAGAACGATTACTGTTCAAT+GGG + chr1_2:21672795-21672814 None:intergenic 35.0%
AGAAAGATTACTGCTCAAAG+GGG + chr1_2:21672830-21672849 None:intergenic 35.0%
CAGAAAGATTACTGCTCAAA+GGG + chr1_2:21672831-21672850 None:intergenic 35.0%
ACAGAAAGATTACTGCTCAA+AGG + chr1_2:21672832-21672851 None:intergenic 35.0%
AGGATCCAAAAAACAAGAAG+AGG + chr1_2:21672927-21672946 None:intergenic 35.0%
! AGAGGTACATTGCATGAAAT+TGG + chr1_2:21673073-21673092 None:intergenic 35.0%
AATTTCATGCAATGTACCTC+TGG - chr1_2:21673072-21673091 Msa0062340:CDS 35.0%
ATTTCATGCAATGTACCTCT+GGG - chr1_2:21673073-21673092 Msa0062340:CDS 35.0%
ATAAAAACTGAGAAACCCAG+AGG + chr1_2:21673091-21673110 None:intergenic 35.0%
ACAATGCAATTCCTGCAAAA+TGG - chr1_2:21673263-21673282 Msa0062340:intron 35.0%
AAAAGGCAGGAAAAAGAAAG+AGG + chr1_2:21673320-21673339 None:intergenic 35.0%
ATTCTTCATCAACAAACACC+GGG + chr1_2:21673479-21673498 None:intergenic 35.0%
CATTCTTCATCAACAAACAC+CGG + chr1_2:21673480-21673499 None:intergenic 35.0%
! GTAAGTTGAATCACTTTGCA+AGG - chr1_2:21673506-21673525 Msa0062340:intron 35.0%
GTGAAAGAGAAAAACAGACT+AGG + chr1_2:21673570-21673589 None:intergenic 35.0%
TTATAGCCTGTTTGGTTAAG+CGG - chr1_2:21673592-21673611 Msa0062340:intron 35.0%
ACATCAATCTGATCCTTCTT+TGG - chr1_2:21673768-21673787 Msa0062340:intron 35.0%
ATGGTAAAGCTTTCCAAAGA+AGG + chr1_2:21673784-21673803 None:intergenic 35.0%
!!! GCGTGTTGTTGGATTTTTTA+TGG - chr1_2:21673885-21673904 Msa0062340:intron 35.0%
TTCATTAAATCCGAAAGCAG+AGG - chr1_2:21673944-21673963 Msa0062340:intron 35.0%
TCATTAAATCCGAAAGCAGA+GGG - chr1_2:21673945-21673964 Msa0062340:intron 35.0%
AGTCCTCAAATTTGAAGACT+AGG - chr1_2:21673970-21673989 Msa0062340:intron 35.0%
! TTGCCTAGTCTTCAAATTTG+AGG + chr1_2:21673976-21673995 None:intergenic 35.0%
GATTTCTGTCATATCAGAGA+GGG + chr1_2:21674047-21674066 None:intergenic 35.0%
AGATTTCTGTCATATCAGAG+AGG + chr1_2:21674048-21674067 None:intergenic 35.0%
!!! GAAGTTTTAATTATCTGGGG+AGG + chr1_2:21674179-21674198 None:intergenic 35.0%
! ACACATTTTGTAGCTTTCCA+GGG + chr1_2:21674268-21674287 None:intergenic 35.0%
! AACACATTTTGTAGCTTTCC+AGG + chr1_2:21674269-21674288 None:intergenic 35.0%
AGCTTCAGCAACAACAACAA+TGG - chr1_2:21670397-21670416 Msa0062340:three_prime_UTR 40.0%
TTCAGCAACAACAACAATGG+CGG - chr1_2:21670400-21670419 Msa0062340:three_prime_UTR 40.0%
AATGCTAGAAACTCTGTCTC+TGG + chr1_2:21670449-21670468 None:intergenic 40.0%
! CTAGCATTGAAGAGAGAAAC+GGG - chr1_2:21670461-21670480 Msa0062340:three_prime_UTR 40.0%
! AACGTGAGACCTTTGAAAAG+AGG - chr1_2:21670509-21670528 Msa0062340:three_prime_UTR 40.0%
! TTTTTGCCTCTGTAGAACCA+AGG + chr1_2:21670924-21670943 None:intergenic 40.0%
GTGAAACCAAACATAGGCTT+AGG - chr1_2:21671184-21671203 Msa0062340:intron 40.0%
GAGAAACCTAAGCCTATGTT+TGG + chr1_2:21671193-21671212 None:intergenic 40.0%
! CCTATGTTTGGTTCCACATT+TGG + chr1_2:21671307-21671326 None:intergenic 40.0%
CCAAATGTGGAACCAAACAT+AGG - chr1_2:21671304-21671323 Msa0062340:CDS 40.0%
! ATGGTGAAGGTGTATGAAGT+GGG - chr1_2:21671679-21671698 Msa0062340:intron 40.0%
AAAGTGTGGCTCGAATATGT+AGG - chr1_2:21671815-21671834 Msa0062340:intron 40.0%
AAGTGTGGCTCGAATATGTA+GGG - chr1_2:21671816-21671835 Msa0062340:intron 40.0%
CATTTCATATGCTTCGCACT+TGG - chr1_2:21672011-21672030 Msa0062340:intron 40.0%
GCTAACCAGACATTTGAACT+TGG - chr1_2:21672057-21672076 Msa0062340:intron 40.0%
CTATGCCAAGTTCAAATGTC+TGG + chr1_2:21672065-21672084 None:intergenic 40.0%
CATTTGAACTTGGCATAGCT+AGG - chr1_2:21672067-21672086 Msa0062340:intron 40.0%
TTTCGCTGGAGTTATTCAAC+TGG + chr1_2:21672185-21672204 None:intergenic 40.0%
GTTCAAGGTTTATGTCCATG+TGG - chr1_2:21672258-21672277 Msa0062340:intron 40.0%
GTTGAGCATTCCTGCAAAAA+TGG + chr1_2:21672428-21672447 None:intergenic 40.0%
TTCTTGTACGCTCAATGTCA+AGG - chr1_2:21672481-21672500 Msa0062340:intron 40.0%
CTAGGTAGCAGAAGAAATGA+GGG + chr1_2:21672607-21672626 None:intergenic 40.0%
AATGTGGAGAGAATTGAAGG+GGG + chr1_2:21672712-21672731 None:intergenic 40.0%
GCAGAACGATTACTGTTCAA+TGG + chr1_2:21672796-21672815 None:intergenic 40.0%
CCAAAGCTACAATACTGGTA+GGG + chr1_2:21672874-21672893 None:intergenic 40.0%
TCCAAAGCTACAATACTGGT+AGG + chr1_2:21672875-21672894 None:intergenic 40.0%
CAGGAAAAAGAAAGAGGACT+AGG + chr1_2:21673314-21673333 None:intergenic 40.0%
TCGATCAATCTTGAAAAGGC+AGG + chr1_2:21673333-21673352 None:intergenic 40.0%
AACTGGAATTATGGCTACAG+TGG - chr1_2:21673434-21673453 Msa0062340:intron 40.0%
TGCCATGGAGGTTACAATTT+GGG + chr1_2:21673540-21673559 None:intergenic 40.0%
ATTAGAGCTTAGGGAACGTA+GGG + chr1_2:21673638-21673657 None:intergenic 40.0%
AATTAGAGCTTAGGGAACGT+AGG + chr1_2:21673639-21673658 None:intergenic 40.0%
ACGACGAAAAGGACTTCAAA+AGG - chr1_2:21673997-21674016 Msa0062340:intron 40.0%
GAAGAGAAACCGAGTTACTA+AGG - chr1_2:21674121-21674140 Msa0062340:intron 40.0%
AGAAACCGAGTTACTAAGGA+AGG - chr1_2:21674125-21674144 Msa0062340:intron 40.0%
TGGATCCTTCCTTAGTAACT+CGG + chr1_2:21674133-21674152 None:intergenic 40.0%
TGATAGCATGTTGCTGCAAA+GGG + chr1_2:21674215-21674234 None:intergenic 40.0%
ATGATAGCATGTTGCTGCAA+AGG + chr1_2:21674216-21674235 None:intergenic 40.0%
! ACGTTACGGCCTCTTTTCAA+AGG + chr1_2:21670521-21670540 None:intergenic 45.0%
!! CTGTATCCTTGGTTCTACAG+AGG - chr1_2:21670915-21670934 Msa0062340:intron 45.0%
!!! CATTTTGGCTGCTCCAAATG+TGG - chr1_2:21671291-21671310 Msa0062340:intron 45.0%
GTGGAACCAAACATAGGCTT+AGG - chr1_2:21671310-21671329 Msa0062340:CDS 45.0%
! GATGGTGAAGGTGTATGAAG+TGG - chr1_2:21671678-21671697 Msa0062340:intron 45.0%
! AGCAATGTGTCCGTGCATTT+TGG - chr1_2:21671756-21671775 Msa0062340:intron 45.0%
!! TGTCCGTGCATTTTGGCATT+CGG - chr1_2:21671763-21671782 Msa0062340:intron 45.0%
GTTCCGAATGCCAAAATGCA+CGG + chr1_2:21671769-21671788 None:intergenic 45.0%
!! GTGCATTTTGGCATTCGGAA+CGG - chr1_2:21671768-21671787 Msa0062340:intron 45.0%
TTGGCATTCGGAACGGTATA+AGG - chr1_2:21671775-21671794 Msa0062340:intron 45.0%
CCTAGGTAGCAGAAGAAATG+AGG + chr1_2:21672608-21672627 None:intergenic 45.0%
CCTCATTTCTTCTGCTACCT+AGG - chr1_2:21672605-21672624 Msa0062340:intron 45.0%
!!! CTCTTTTTCGACTGGTTCCT+AGG + chr1_2:21672625-21672644 None:intergenic 45.0%
CTAGGAACCAGTCGAAAAAG+AGG - chr1_2:21672623-21672642 Msa0062340:intron 45.0%
! TTTGGAACTCTTCTCGCCAA+GGG - chr1_2:21672660-21672679 Msa0062340:intron 45.0%
GGACTAACCATTATCTCCCT+TGG + chr1_2:21672679-21672698 None:intergenic 45.0%
ATGTGGAGAGAATTGAAGGG+GGG + chr1_2:21672711-21672730 None:intergenic 45.0%
TTACTGTTCAATGGGGCCAA+GGG + chr1_2:21672787-21672806 None:intergenic 45.0%
ATTACTGTTCAATGGGGCCA+AGG + chr1_2:21672788-21672807 None:intergenic 45.0%
TAATCGTTCTGCTAAGCCCT+TGG - chr1_2:21672804-21672823 Msa0062340:CDS 45.0%
CCCTACCAGTATTGTAGCTT+TGG - chr1_2:21672871-21672890 Msa0062340:intron 45.0%
! AGTTTGAGCCAAGAGTGTGA+CGG + chr1_2:21673214-21673233 None:intergenic 45.0%
TCACACTCTTGGCTCAAACT+TGG - chr1_2:21673214-21673233 Msa0062340:intron 45.0%
GGCGAAAATCAGCACCTTAA+AGG + chr1_2:21673293-21673312 None:intergenic 45.0%
CCATAATTCCAGTTCGCTGT+GGG + chr1_2:21673428-21673447 None:intergenic 45.0%
GGAATTATGGCTACAGTGGT+TGG - chr1_2:21673438-21673457 Msa0062340:intron 45.0%
GTCCCAAATTGTAACCTCCA+TGG - chr1_2:21673535-21673554 Msa0062340:intron 45.0%
GTGCCATGGAGGTTACAATT+TGG + chr1_2:21673541-21673560 None:intergenic 45.0%
! TTTATGGGACAGCTTTTCCC+TGG - chr1_2:21674248-21674267 Msa0062340:CDS 45.0%
!!! TTATTTTGTAAATTTTTTTT+TGG - chr1_2:21671260-21671279 Msa0062340:intron 5.0%
!!! ATAATCATATTATAAAATTT+TGG + chr1_2:21672550-21672569 None:intergenic 5.0%
!!! TAAGTTTTTTTAAATAAAAA+TGG + chr1_2:21673803-21673822 None:intergenic 5.0%
AGAGAGAAACGGGAACCGAA+TGG - chr1_2:21670471-21670490 Msa0062340:three_prime_UTR 50.0%
GAGAGAAACGGGAACCGAAT+GGG - chr1_2:21670472-21670491 Msa0062340:three_prime_UTR 50.0%
CACTCTAACCAAGGGAGAAG+AGG + chr1_2:21670742-21670761 None:intergenic 50.0%
!! GTTCAAGAAGCGTTTCCTCC+AGG - chr1_2:21671701-21671720 Msa0062340:intron 50.0%
! CTTGGCATAGCTAGGTACTG+TGG - chr1_2:21672075-21672094 Msa0062340:intron 50.0%
!! GCTATGGCGACCATTTTTGC+AGG - chr1_2:21672415-21672434 Msa0062340:intron 50.0%
!!! ACAGGTGCCTCTTTTTCGAC+TGG + chr1_2:21672633-21672652 None:intergenic 50.0%
AGAGTTCCAAAGCTACGCAC+AGG + chr1_2:21672651-21672670 None:intergenic 50.0%
!! CTTTGGAACTCTTCTCGCCA+AGG - chr1_2:21672659-21672678 Msa0062340:intron 50.0%
CTTCTCGCCAAGGGAGATAA+TGG - chr1_2:21672669-21672688 Msa0062340:intron 50.0%
TGTGGAGAGAATTGAAGGGG+GGG + chr1_2:21672710-21672729 None:intergenic 50.0%
TTACTGCTCAAAGGGGCCAA+GGG + chr1_2:21672823-21672842 None:intergenic 50.0%
ATTACTGCTCAAAGGGGCCA+AGG + chr1_2:21672824-21672843 None:intergenic 50.0%
! GTTTGAGCCAAGAGTGTGAC+GGG + chr1_2:21673213-21673232 None:intergenic 50.0%
CACTCTTGGCTCAAACTTGG+TGG - chr1_2:21673217-21673236 Msa0062340:intron 50.0%
TGGTCGTGCCGAAAGAAACA+AGG - chr1_2:21673237-21673256 Msa0062340:intron 50.0%
CCCACAGCGAACTGGAATTA+TGG - chr1_2:21673425-21673444 Msa0062340:intron 50.0%
GCCATAATTCCAGTTCGCTG+TGG + chr1_2:21673429-21673448 None:intergenic 50.0%
ATCAACAAACACCGGGATGC+AGG + chr1_2:21673472-21673491 None:intergenic 50.0%
AGACTAGGTGCATAGTGCCA+TGG + chr1_2:21673555-21673574 None:intergenic 50.0%
GCATCACCGCTTAACCAAAC+AGG + chr1_2:21673601-21673620 None:intergenic 50.0%
!! TTGCTGTTTGCGCGTGTTGT+TGG - chr1_2:21673874-21673893 Msa0062340:intron 50.0%
GAGGACTTACCCTCTGCTTT+CGG + chr1_2:21673957-21673976 None:intergenic 50.0%
GACTAGGCAAGACGACGAAA+AGG - chr1_2:21673986-21674005 Msa0062340:intron 50.0%
CTATGCGGGAAGTTGCGTAA+TGG + chr1_2:21674153-21674172 None:intergenic 50.0%
CGGTGTGACACTTGAGAGCA+TGG + chr1_2:21670556-21670575 None:intergenic 55.0%
GCGAAGATCCTCTTCTCCCT+TGG - chr1_2:21670731-21670750 Msa0062340:intron 55.0%
!! CAAGAAGCGTTTCCTCCAGG+TGG - chr1_2:21671704-21671723 Msa0062340:intron 55.0%
CTCCAGGTGGAGATAGCTCA+GGG - chr1_2:21671717-21671736 Msa0062340:intron 55.0%
TGGAGAGAATTGAAGGGGGG+GGG + chr1_2:21672708-21672727 None:intergenic 55.0%
GTGGAGAGAATTGAAGGGGG+GGG + chr1_2:21672709-21672728 None:intergenic 55.0%
TTGTGTTGTAGGTGCGCCCT+TGG - chr1_2:21672768-21672787 Msa0062340:CDS 55.0%
ATCCAGACCCGTCACACTCT+TGG - chr1_2:21673203-21673222 Msa0062340:intron 55.0%
! TTTCAGGTCCCACAGCGAAC+TGG - chr1_2:21673417-21673436 Msa0062340:intron 55.0%
CTAGGTGCATAGTGCCATGG+AGG + chr1_2:21673552-21673571 None:intergenic 55.0%
TATCTGGGGAGGCTGCTATG+CGG + chr1_2:21674168-21674187 None:intergenic 55.0%
CCTGAGCTATCTCCACCTGG+AGG + chr1_2:21671719-21671738 None:intergenic 60.0%
CCTCCAGGTGGAGATAGCTC+AGG - chr1_2:21671716-21671735 Msa0062340:intron 60.0%
AGCCCTGAGCTATCTCCACC+TGG + chr1_2:21671722-21671741 None:intergenic 60.0%
AGGTGGAGATAGCTCAGGGC+TGG - chr1_2:21671721-21671740 Msa0062340:intron 60.0%
TGGAGATAGCTCAGGGCTGG+TGG - chr1_2:21671724-21671743 Msa0062340:intron 60.0%
! GAGGCACCTGTGCGTAGCTT+TGG - chr1_2:21672642-21672661 Msa0062340:intron 60.0%
AGAGAATTGAAGGGGGGGGG+GGG + chr1_2:21672705-21672724 None:intergenic 60.0%
GAGAGAATTGAAGGGGGGGG+GGG + chr1_2:21672706-21672725 None:intergenic 60.0%
GGAGAGAATTGAAGGGGGGG+GGG + chr1_2:21672707-21672726 None:intergenic 60.0%
!! GTGACGGGTCTGGATGAGGT+GGG + chr1_2:21673198-21673217 None:intergenic 60.0%
!! TGTGACGGGTCTGGATGAGG+TGG + chr1_2:21673199-21673218 None:intergenic 60.0%
!! GAGTGTGACGGGTCTGGATG+AGG + chr1_2:21673202-21673221 None:intergenic 60.0%
!! AGCCAAGAGTGTGACGGGTC+TGG + chr1_2:21673208-21673227 None:intergenic 60.0%
TGGTGCAAGTGCCTGCATCC+CGG - chr1_2:21673458-21673477 Msa0062340:intron 60.0%
ATCTGGGGAGGCTGCTATGC+GGG + chr1_2:21674167-21674186 None:intergenic 60.0%
AGAATTGAAGGGGGGGGGGG+GGG + chr1_2:21672703-21672722 None:intergenic 65.0%
GAGAATTGAAGGGGGGGGGG+GGG + chr1_2:21672704-21672723 None:intergenic 65.0%
AATTGAAGGGGGGGGGGGGG+GGG + chr1_2:21672701-21672720 None:intergenic 70.0%
GAATTGAAGGGGGGGGGGGG+GGG + chr1_2:21672702-21672721 None:intergenic 70.0%
CGGGTCTGGATGAGGTGGGC+AGG + chr1_2:21673194-21673213 None:intergenic 70.0%
ATTGAAGGGGGGGGGGGGGG+GGG + chr1_2:21672700-21672719 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 21670327 21674481 21670327 ID=Msa0062340;Name=Msa0062340
chr1_2 mRNA 21670327 21674481 21670327 ID=Msa0062340-mRNA-1;Parent=Msa0062340;Name=Msa0062340-mRNA-1;_AED=0.09;_eAED=0.09;_QI=68|1|1|1|0.90|0.83|12|293|390
chr1_2 exon 21670327 21670683 21670327 ID=Msa0062340-mRNA-1:exon:8048;Parent=Msa0062340-mRNA-1
chr1_2 exon 21670790 21670864 21670790 ID=Msa0062340-mRNA-1:exon:8047;Parent=Msa0062340-mRNA-1
chr1_2 exon 21671303 21671385 21671303 ID=Msa0062340-mRNA-1:exon:8046;Parent=Msa0062340-mRNA-1
chr1_2 exon 21671511 21671670 21671511 ID=Msa0062340-mRNA-1:exon:8045;Parent=Msa0062340-mRNA-1
chr1_2 exon 21671945 21672029 21671945 ID=Msa0062340-mRNA-1:exon:8044;Parent=Msa0062340-mRNA-1
chr1_2 exon 21672118 21672181 21672118 ID=Msa0062340-mRNA-1:exon:8043;Parent=Msa0062340-mRNA-1
chr1_2 exon 21672290 21672371 21672290 ID=Msa0062340-mRNA-1:exon:8042;Parent=Msa0062340-mRNA-1
chr1_2 exon 21672720 21672877 21672720 ID=Msa0062340-mRNA-1:exon:8041;Parent=Msa0062340-mRNA-1
chr1_2 exon 21672976 21673120 21672976 ID=Msa0062340-mRNA-1:exon:8040;Parent=Msa0062340-mRNA-1
chr1_2 exon 21674050 21674109 21674050 ID=Msa0062340-mRNA-1:exon:8039;Parent=Msa0062340-mRNA-1
chr1_2 exon 21674196 21674403 21674196 ID=Msa0062340-mRNA-1:exon:8038;Parent=Msa0062340-mRNA-1
chr1_2 exon 21674425 21674481 21674425 ID=Msa0062340-mRNA-1:exon:8037;Parent=Msa0062340-mRNA-1
chr1_2 five_prime_UTR 21674425 21674481 21674425 ID=Msa0062340-mRNA-1:five_prime_utr;Parent=Msa0062340-mRNA-1
chr1_2 five_prime_UTR 21674393 21674403 21674393 ID=Msa0062340-mRNA-1:five_prime_utr;Parent=Msa0062340-mRNA-1
chr1_2 CDS 21674196 21674392 21674196 ID=Msa0062340-mRNA-1:cds;Parent=Msa0062340-mRNA-1
chr1_2 CDS 21674050 21674109 21674050 ID=Msa0062340-mRNA-1:cds;Parent=Msa0062340-mRNA-1
chr1_2 CDS 21672976 21673120 21672976 ID=Msa0062340-mRNA-1:cds;Parent=Msa0062340-mRNA-1
chr1_2 CDS 21672720 21672877 21672720 ID=Msa0062340-mRNA-1:cds;Parent=Msa0062340-mRNA-1
chr1_2 CDS 21672290 21672371 21672290 ID=Msa0062340-mRNA-1:cds;Parent=Msa0062340-mRNA-1
chr1_2 CDS 21672118 21672181 21672118 ID=Msa0062340-mRNA-1:cds;Parent=Msa0062340-mRNA-1
chr1_2 CDS 21671945 21672029 21671945 ID=Msa0062340-mRNA-1:cds;Parent=Msa0062340-mRNA-1
chr1_2 CDS 21671511 21671670 21671511 ID=Msa0062340-mRNA-1:cds;Parent=Msa0062340-mRNA-1
chr1_2 CDS 21671303 21671385 21671303 ID=Msa0062340-mRNA-1:cds;Parent=Msa0062340-mRNA-1
chr1_2 CDS 21670790 21670864 21670790 ID=Msa0062340-mRNA-1:cds;Parent=Msa0062340-mRNA-1
chr1_2 CDS 21670620 21670683 21670620 ID=Msa0062340-mRNA-1:cds;Parent=Msa0062340-mRNA-1
chr1_2 three_prime_UTR 21670327 21670619 21670327 ID=Msa0062340-mRNA-1:three_prime_utr;Parent=Msa0062340-mRNA-1
Gene Sequence

>Msa0062340

ATGGCGGAGATTGAAACGCAGAAGATAGATCCAGAGACAGAGTTTCTAGCATTGAAGAGAGAAACGGGAACCGAATGGGAAACTTTCAAAGAAAACGTGAGACCTTTGAAAAGAGGCCGTAACGTTAACATTCTCAACCATGCTCTCAAGTGTCACACCGATAATTACCTCAAGAAATCTCTTATTCAACAGCGAAGAAAACTTATTGAAGCGATTGATGATTACAAAGGCGAAGATCCTCTTCTCCCTTGGTTAGAGTGTATGAAGTGGGTTCAAGAAGCGTTTCCTCCAGGTGGAGATAGCTCAGGGCTGGTGGTGATTTATGAGCAATGTGTCCGTGCATTTTGGCATTCGGAACGGTATAAGGAAGATTTGCGATATCTCAAAGTGTGGCTCGAATATGCAGAAAATTGCTTTGATAAGGAAGTTATATATTCTTTTTTGGATGCAAATGAAATTGGAAAAACTCATTCCGATTTCTACATTTCATATGCTTCGCACTTGGAATCTAAGAACAAGTTTAAAGCTGCTAACCAGACATTTGAACTTGGCATAGCTAGGAATGCTCAACCCATTGAAAAACTGAAAGCTGCATATAGAAAATTTCTTGTACGCTCAATGTCAAGGACAAAAGCTATAGATGAACCAGTCGAAAAAGAGGCACCTGTGCGTAGCTTTGGAACTCTTCTCGCCAAGGGAGATAATGGTGCGCCCTTGGCCCCATTGAACAGTAATCGTTCTGCTAAGCCCTTGGCCCCTTTGAGCAGTAATCTTTCTGTTAAGAATGATAGGACTCGAGCAGCTCCACTTTCCATTTATAAAGATTCAAATGCTAGTGGTGAGACCTGCCCACCTCATCCAGACCCGTCACACTCTTGGCTCAAACTTGGTGGTCGTGCCGAAAGAAACAAGGAAAACAATGCAATTCCTGCAAAATGGAAATCCTTTAAGGTCCCACAGCGAACTGGAATTATGGCTACAGTGGTTGGTGCAAGTGCCTGCATCCCGGTGTTTGTTGATGAAGAATGTCAAGGTTCATTAAATCCGAAAGCAGAGGGTAAGTCCTCAAATTTGAAGACTAGGCAAGACGACGAAAAGGACTTCAAAAGAGAAACCGAGTTACTAAGGAAGGATCCATTACGCAACTTCCCGCATAGCAGCCTCCCCAGATAA

Protein sequence

>Msa0062340

MAEIETQKIDPETEFLALKRETGTEWETFKENVRPLKRGRNVNILNHALKCHTDNYLKKSLIQQRRKLIEAIDDYKGEDPLLPWLECMKWVQEAFPPGGDSSGLVVIYEQCVRAFWHSERYKEDLRYLKVWLEYAENCFDKEVIYSFLDANEIGKTHSDFYISYASHLESKNKFKAANQTFELGIARNAQPIEKLKAAYRKFLVRSMSRTKAIDEPVEKEAPVRSFGTLLAKGDNGAPLAPLNSNRSAKPLAPLSSNLSVKNDRTRAAPLSIYKDSNASGETCPPHPDPSHSWLKLGGRAERNKENNAIPAKWKSFKVPQRTGIMATVVGASACIPVFVDEECQGSLNPKAEGKSSNLKTRQDDEKDFKRETELLRKDPLRNFPHSSLPR*