AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0900230

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0900230 MtrunA17_Chr6g0486521 73.780 164 22 1 1 143 181 344 2.99e-65 214
Msa0900230 MtrunA17_Chr6g0486221 71.341 164 26 1 1 143 181 344 1.64e-63 209
Msa0900230 MtrunA17_Chr6g0486271 71.341 164 26 1 1 143 181 344 2.95e-63 205
Msa0900230 MtrunA17_Chr2g0299561 72.561 164 24 1 1 143 181 344 8.75e-63 207
Msa0900230 MtrunA17_Chr6g0486301 80.597 134 26 0 10 143 211 344 6.66e-59 196
Msa0900230 MtrunA17_Chr6g0486361 67.683 164 32 1 1 143 181 344 5.00e-57 191
Msa0900230 MtrunA17_Chr6g0486731 81.061 132 25 0 10 141 211 342 6.05e-57 190
Msa0900230 MtrunA17_Chr4g0041931 67.910 134 43 0 10 143 215 348 1.77e-55 186
Msa0900230 MtrunA17_Chr6g0486481 67.073 164 33 1 1 143 181 344 1.09e-54 184
Msa0900230 MtrunA17_Chr6g0486311 65.854 164 35 1 1 143 181 344 2.08e-54 183
Msa0900230 MtrunA17_Chr6g0485991 64.024 164 38 1 1 143 181 344 2.84e-53 180
Msa0900230 MtrunA17_Chr4g0041441 67.910 134 42 1 10 143 196 328 3.39e-52 177
Msa0900230 MtrunA17_Chr4g0041431 65.414 133 45 1 11 143 30 161 1.25e-49 169
Msa0900230 MtrunA17_Chr4g0041951 67.910 134 42 1 10 143 269 401 1.57e-49 169
Msa0900230 MtrunA17_Chr4g0041611 62.406 133 49 1 10 142 211 342 6.57e-48 164
Msa0900230 MtrunA17_Chr4g0041241 67.164 134 43 1 10 143 213 345 2.88e-45 157
Msa0900230 MtrunA17_Chr4g0041231 67.164 134 43 1 10 143 213 345 1.22e-44 155
Msa0900230 MtrunA17_Chr4g0042011 59.843 127 50 1 17 143 222 347 1.99e-42 149
Msa0900230 MtrunA17_Chr4g0041941 58.088 136 54 2 10 143 201 335 5.20e-41 145
Msa0900230 MtrunA17_Chr4g0041271 53.333 120 55 1 24 143 1 119 7.49e-36 120
Msa0900230 MtrunA17_Chr7g0242811 48.462 130 66 1 14 143 239 367 6.45e-32 119
Msa0900230 MtrunA17_Chr5g0394051 46.923 130 68 1 14 143 218 346 1.08e-31 116
Msa0900230 MtrunA17_Chr6g0486451 59.200 125 30 1 1 104 181 305 1.25e-31 114
Msa0900230 MtrunA17_Chr7g0242751 43.846 130 72 1 14 143 242 370 3.29e-29 111
Msa0900230 MtrunA17_Chr2g0319821 43.750 128 71 1 14 141 240 366 2.54e-28 108
Msa0900230 MtrunA17_Chr7g0243021 43.077 130 67 3 15 141 210 335 2.58e-28 106
Msa0900230 MtrunA17_Chr6g0482441 41.667 132 75 1 9 140 197 326 1.51e-26 103
Msa0900230 MtrunA17_Chr4g0009341 37.903 124 77 0 19 142 112 235 2.65e-26 102
Msa0900230 MtrunA17_Chr2g0319921 42.623 122 69 1 20 141 214 334 6.98e-26 102
Msa0900230 MtrunA17_Chr6g0455191 40.650 123 73 0 19 141 518 640 8.64e-26 101
Msa0900230 MtrunA17_Chr3g0114401 39.394 132 79 1 11 141 82 213 5.69e-25 99.0
Msa0900230 MtrunA17_Chr2g0319851 43.411 129 71 2 14 141 248 375 5.71e-25 99.4
Msa0900230 MtrunA17_Chr5g0417081 39.024 123 74 1 19 141 2 123 8.11e-25 97.8
Msa0900230 MtrunA17_Chr6g0454831 38.211 123 76 0 19 141 210 332 1.64e-24 98.2
Msa0900230 MtrunA17_Chr4g0006771 36.879 141 86 2 3 141 208 347 1.73e-24 97.8
Msa0900230 MtrunA17_Chr6g0454971 36.879 141 85 1 1 141 236 372 2.29e-24 97.8
Msa0900230 MtrunA17_Chr4g0010651 38.519 135 81 2 9 142 201 334 3.11e-24 97.4
Msa0900230 MtrunA17_Chr7g0242781 43.333 120 67 1 24 143 1 119 3.49e-24 96.3
Msa0900230 MtrunA17_Chr6g0480911 41.844 141 76 4 3 140 205 342 1.28e-23 95.5
Msa0900230 MtrunA17_Chr4g0009141 38.931 131 72 3 19 142 222 351 1.95e-23 95.1
Msa0900230 MtrunA17_Chr4g0009141 32.812 128 86 0 14 141 722 849 8.42e-21 87.4
Msa0900230 MtrunA17_Chr7g0242801 46.970 132 67 2 14 143 285 415 2.57e-23 94.7
Msa0900230 MtrunA17_Chr6g0479651 43.750 128 68 3 14 140 220 344 3.01e-23 94.4
Msa0900230 MtrunA17_Chr6g0455131 35.461 141 87 1 1 141 280 416 4.04e-23 94.0
Msa0900230 MtrunA17_Chr4g0009101 35.156 128 83 0 14 141 740 867 5.49e-23 93.6
Msa0900230 MtrunA17_Chr4g0009101 35.593 118 76 0 25 142 248 365 1.18e-16 75.5
Msa0900230 MtrunA17_Chr3g0085731 39.683 126 75 1 16 141 222 346 6.06e-23 93.6
Msa0900230 MtrunA17_Chr4g0025741 38.971 136 79 3 7 140 207 340 1.05e-22 92.8
Msa0900230 MtrunA17_Chr4g0025751 38.686 137 78 4 7 140 207 340 1.15e-22 92.8
Msa0900230 MtrunA17_Chr6g0479821 39.850 133 78 2 8 140 213 343 1.40e-22 92.4
Msa0900230 MtrunA17_Chr4g0025831 39.416 137 77 4 7 140 207 340 1.82e-22 92.0
Msa0900230 MtrunA17_Chr3g0085541 40.476 126 74 1 16 141 221 345 2.67e-22 91.7
Msa0900230 MtrunA17_Chr7g0256881 40.000 125 73 2 16 140 208 330 5.24e-22 90.9
Msa0900230 MtrunA17_Chr6g0454901 32.824 131 88 0 10 140 12 142 5.54e-22 90.5
Msa0900230 MtrunA17_Chr6g0479761 36.154 130 81 2 11 140 70 197 7.15e-22 90.5
Msa0900230 MtrunA17_Chr6g0478451 37.410 139 84 3 3 140 207 343 8.09e-22 90.5
Msa0900230 MtrunA17_Chr4g0009301 37.008 127 77 2 19 142 240 366 8.66e-22 90.1
Msa0900230 MtrunA17_Chr4g0009301 33.094 139 89 1 3 141 735 869 1.60e-19 84.0
Msa0900230 MtrunA17_Chr4g0025811 38.686 137 78 4 7 140 207 340 8.97e-22 90.1
Msa0900230 MtrunA17_Chr4g0009171 33.571 140 89 1 2 141 194 329 1.03e-21 90.1
Msa0900230 MtrunA17_Chr4g0009171 33.858 127 84 0 14 140 928 1054 1.33e-20 87.0
Msa0900230 MtrunA17_Chr6g0479731 35.878 131 82 2 10 140 210 338 1.05e-21 90.1
Msa0900230 MtrunA17_Chr6g0451551 39.161 143 84 2 3 143 345 486 1.14e-21 89.7
Msa0900230 MtrunA17_Chr6g0479051 36.000 125 78 2 16 140 187 309 1.24e-21 89.7
Msa0900230 MtrunA17_Chr4g0005871 33.594 128 85 0 14 141 330 457 1.25e-21 89.7
Msa0900230 MtrunA17_Chr4g0005591 34.043 141 89 1 1 141 265 401 1.30e-21 89.7
Msa0900230 MtrunA17_Chr7g0255681 37.705 122 76 0 19 140 1217 1338 1.99e-21 89.4
Msa0900230 MtrunA17_Chr7g0255681 36.066 122 78 0 19 140 214 335 5.13e-21 88.2
Msa0900230 MtrunA17_Chr7g0255681 34.677 124 81 0 17 140 713 836 4.94e-18 79.7
Msa0900230 MtrunA17_Chr4g0009241 33.858 127 84 0 14 140 744 870 2.09e-21 89.4
Msa0900230 MtrunA17_Chr4g0009241 32.000 125 84 1 19 143 247 370 7.79e-19 81.6
Msa0900230 MtrunA17_Chr8g0354701 37.795 127 77 2 14 140 210 334 2.37e-21 89.0
Msa0900230 MtrunA17_Chr6g0481251 37.681 138 80 4 7 141 64 198 2.59e-21 89.0
Msa0900230 MtrunA17_Chr8g0372681 35.556 135 77 4 10 140 207 335 2.93e-21 88.6
Msa0900230 MtrunA17_Chr8g0342201 35.556 135 77 4 10 140 245 373 3.45e-21 88.6
Msa0900230 MtrunA17_Chr4g0009041 33.594 128 85 0 14 141 710 837 3.48e-21 88.6
Msa0900230 MtrunA17_Chr6g0480451 37.956 137 79 4 7 140 272 405 4.49e-21 88.2
Msa0900230 MtrunA17_Chr3g0118981 37.984 129 76 2 16 144 220 344 4.71e-21 88.2
Msa0900230 MtrunA17_Chr2g0299841 35.772 123 77 2 19 140 257 378 5.70e-21 87.8
Msa0900230 MtrunA17_Chr6g0480041 38.168 131 77 3 11 140 213 340 6.79e-21 87.8
Msa0900230 MtrunA17_Chr6g0482191 37.984 129 76 3 14 140 81 207 7.03e-21 87.4
Msa0900230 MtrunA17_Chr6g0480421 39.130 138 76 5 7 140 65 198 7.16e-21 87.4
Msa0900230 MtrunA17_Chr6g0480271 38.235 136 80 3 7 140 208 341 7.21e-21 87.4
Msa0900230 MtrunA17_Chr6g0480321 36.879 141 83 4 3 140 61 198 7.96e-21 87.4
Msa0900230 MtrunA17_Chr6g0480311 38.686 137 78 4 7 140 195 328 9.75e-21 87.4
Msa0900230 MtrunA17_Chr4g0005891 31.915 141 92 1 1 141 236 372 9.83e-21 87.4
Msa0900230 MtrunA17_Chr2g0299791 34.615 130 83 2 12 140 209 337 1.03e-20 87.0
Msa0900230 MtrunA17_Chr4g0005851 34.043 141 89 1 1 141 225 361 1.23e-20 87.0
Msa0900230 MtrunA17_Chr8g0342131 37.121 132 79 3 10 140 212 340 1.24e-20 87.0
Msa0900230 MtrunA17_Chr8g0352211 37.984 129 78 2 14 141 217 344 1.37e-20 87.0
Msa0900230 MtrunA17_Chr6g0479621 35.606 132 79 3 11 140 215 342 1.38e-20 86.7
Msa0900230 MtrunA17_Chr4g0009351 33.083 133 89 0 9 141 112 244 1.42e-20 86.3
Msa0900230 MtrunA17_Chr2g0299881 34.615 130 83 2 12 140 213 341 1.96e-20 86.3
Msa0900230 MtrunA17_Chr6g0479701 38.168 131 79 2 10 140 218 346 2.27e-20 86.3
Msa0900230 MtrunA17_Chr6g0481141 35.659 129 79 3 14 141 267 392 2.69e-20 85.9
Msa0900230 MtrunA17_Chr6g0454821 32.812 128 85 1 14 141 246 372 2.91e-20 85.9
Msa0900230 MtrunA17_Chr6g0479641 35.915 142 83 4 3 140 204 341 3.16e-20 85.9
Msa0900230 MtrunA17_Chr4g0010711 37.097 124 77 1 19 141 219 342 3.69e-20 85.5
Msa0900230 MtrunA17_Chr4g0010711 36.066 122 78 0 19 140 720 841 5.81e-20 85.1
Msa0900230 MtrunA17_Chr8g0368251 37.226 137 80 4 7 140 207 340 4.39e-20 85.5
Msa0900230 MtrunA17_Chr3g0084151 37.600 125 76 1 16 140 212 334 4.52e-20 85.5
Msa0900230 MtrunA17_Chr6g0455211 33.071 127 85 0 14 140 249 375 5.54e-20 85.1
Msa0900230 MtrunA17_Chr6g0454931 33.775 151 77 4 1 141 262 399 5.67e-20 85.1
Msa0900230 MtrunA17_Chr7g0234891 34.286 140 88 1 1 140 116 251 6.86e-20 84.3
Msa0900230 MtrunA17_Chr6g0478771 34.351 131 84 2 10 140 202 330 7.02e-20 84.7
Msa0900230 MtrunA17_Chr8g0342161 36.508 126 77 2 16 140 215 338 7.62e-20 84.0
Msa0900230 MtrunA17_Chr1g0146421 38.931 131 74 4 12 140 214 340 8.36e-20 84.7
Msa0900230 MtrunA17_Chr2g0300251 36.641 131 81 2 10 140 214 342 8.49e-20 84.7
Msa0900230 MtrunA17_Chr6g0455221 34.375 128 84 0 14 141 210 337 9.87e-20 84.3
Msa0900230 MtrunA17_Chr6g0479631 34.109 129 83 2 12 140 214 340 1.13e-19 84.3
Msa0900230 MtrunA17_Chr6g0481221 36.232 138 84 3 6 141 206 341 1.17e-19 84.0
Msa0900230 MtrunA17_Chr8g0379341 37.168 113 70 1 29 141 31 142 1.21e-19 79.7
Msa0900230 MtrunA17_Chr3g0081531 34.821 112 73 0 29 140 218 329 1.26e-19 84.0
Msa0900230 MtrunA17_Chr4g0009401 33.333 126 84 0 16 141 702 827 1.35e-19 84.0
Msa0900230 MtrunA17_Chr4g0009401 34.615 130 72 3 19 142 206 328 6.91e-16 73.6
Msa0900230 MtrunA17_Chr8g0351551 36.296 135 81 4 9 140 204 336 1.42e-19 84.0
Msa0900230 MtrunA17_Chr8g0371711 38.393 112 68 1 29 140 230 340 1.54e-19 84.0
Msa0900230 MtrunA17_Chr6g0481331 37.594 133 82 1 9 141 254 385 1.56e-19 84.0
Msa0900230 MtrunA17_Chr6g0482511 34.646 127 81 2 14 140 231 355 1.62e-19 83.6
Msa0900230 MtrunA17_Chr3g0102121 35.878 131 82 2 14 144 214 342 1.64e-19 83.6
Msa0900230 MtrunA17_Chr6g0479671 37.500 136 81 3 7 140 207 340 1.74e-19 83.6
Msa0900230 MtrunA17_Chr6g0454951 33.571 140 89 1 1 140 282 417 1.75e-19 83.6
Msa0900230 MtrunA17_Chr8g0342911 34.921 126 79 2 16 140 226 349 2.15e-19 83.6
Msa0900230 MtrunA17_Chr6g0480181 34.615 130 83 2 12 141 207 334 2.37e-19 83.2
Msa0900230 MtrunA17_Chr6g0479591 36.496 137 81 4 7 140 233 366 2.51e-19 83.2
Msa0900230 MtrunA17_Chr4g0025701 37.500 136 81 3 7 140 207 340 2.83e-19 82.8
Msa0900230 MtrunA17_Chr2g0299811 32.624 141 91 3 3 140 45 184 3.41e-19 82.8
Msa0900230 MtrunA17_Chr6g0484161 37.008 127 76 3 15 140 241 364 3.95e-19 82.8
Msa0900230 MtrunA17_Chr6g0481001 37.500 128 74 3 16 141 222 345 4.13e-19 82.4
Msa0900230 MtrunA17_Chr5g0430531 40.800 125 72 1 19 141 211 335 4.33e-19 82.0
Msa0900230 MtrunA17_Chr4g0041971 62.903 62 23 0 58 119 3 64 4.56e-19 75.9
Msa0900230 MtrunA17_Chr8g0339031 37.097 124 76 2 19 141 220 342 5.29e-19 82.4
Msa0900230 MtrunA17_Chr8g0353001 37.302 126 76 2 16 140 213 336 6.59e-19 82.0
Msa0900230 MtrunA17_Chr1g0172541 37.984 129 78 1 12 140 200 326 6.59e-19 82.0
Msa0900230 MtrunA17_Chr6g0480151 35.433 127 80 2 14 140 216 340 9.84e-19 81.6
Msa0900230 MtrunA17_Chr8g0363851 34.722 144 87 2 1 142 18 156 1.08e-18 81.3
Msa0900230 MtrunA17_Chr6g0482141 34.821 112 72 1 29 140 230 340 1.69e-18 80.9
Msa0900230 MtrunA17_Chr6g0454851 32.857 140 90 1 1 140 288 423 2.04e-18 80.5
Msa0900230 MtrunA17_Chr6g0478741 32.061 131 87 1 10 140 202 330 2.16e-18 80.5
Msa0900230 MtrunA17_Chr2g0299921 34.821 112 72 1 29 140 225 335 5.01e-18 79.3
Msa0900230 MtrunA17_Chr6g0478841 32.824 131 86 1 10 140 202 330 5.26e-18 79.3
Msa0900230 MtrunA17_Chr6g0480091 33.846 130 84 2 11 140 213 340 6.21e-18 79.0
Msa0900230 MtrunA17_Chr5g0420331 37.795 127 76 3 19 143 210 335 6.44e-18 79.3
Msa0900230 MtrunA17_Chr4g0018431 34.615 130 81 2 14 143 216 341 7.79e-18 79.0
Msa0900230 MtrunA17_Chr6g0480981 35.200 125 79 1 16 140 77 199 9.21e-18 78.6
Msa0900230 MtrunA17_Chr6g0479001 34.351 131 84 1 10 140 202 330 1.06e-17 78.6
Msa0900230 MtrunA17_Chr8g0338881 33.058 121 81 0 20 140 240 360 1.29e-17 78.2
Msa0900230 MtrunA17_Chr4g0014831 35.043 117 75 1 24 140 1 116 1.41e-17 78.2
Msa0900230 MtrunA17_Chr8g0343671 35.606 132 83 2 10 140 245 375 1.86e-17 77.8
Msa0900230 MtrunA17_Chr3g0084851 38.931 131 78 2 10 140 213 341 1.92e-17 77.8
Msa0900230 MtrunA17_Chr3g0119601 36.607 112 71 0 29 140 221 332 2.72e-17 77.4
Msa0900230 MtrunA17_Chr6g0482161 37.168 113 68 2 29 140 225 335 2.85e-17 77.4
Msa0900230 MtrunA17_Chr7g0248511 33.929 112 72 2 29 140 235 344 3.05e-17 77.4
Msa0900230 MtrunA17_Chr7g0248521 35.714 112 70 2 29 140 228 337 3.36e-17 77.0
Msa0900230 MtrunA17_Chr4g0005391 31.343 134 89 2 9 142 250 380 3.59e-17 77.0
Msa0900230 MtrunA17_Chr3g0084841 33.036 112 74 1 29 140 232 342 3.64e-17 77.0
Msa0900230 MtrunA17_Chr3g0102171 36.364 132 76 2 16 144 216 342 4.85e-17 76.6
Msa0900230 MtrunA17_Chr4g0010521 32.773 119 80 0 10 128 200 318 5.49e-17 76.6
Msa0900230 MtrunA17_Chr8g0353371 36.364 132 76 3 15 140 220 349 6.12e-17 76.3
Msa0900230 MtrunA17_Chr3g0102281 36.364 132 76 2 16 144 216 342 7.63e-17 76.3
Msa0900230 MtrunA17_Chr2g0299851 34.821 112 72 1 29 140 226 336 7.93e-17 76.3
Msa0900230 MtrunA17_Chr6g0480521 35.294 136 84 2 7 140 208 341 9.55e-17 75.9
Msa0900230 MtrunA17_Chr8g0348541 33.036 112 74 1 29 140 233 343 1.12e-16 75.5
Msa0900230 MtrunA17_Chr5g0417031 39.000 100 60 1 19 118 2 100 1.53e-16 70.5
Msa0900230 MtrunA17_Chr3g0084771 38.168 131 80 1 10 140 209 338 1.60e-16 75.1
Msa0900230 MtrunA17_Chr6g0474801 35.338 133 85 1 9 141 211 342 1.64e-16 75.1
Msa0900230 MtrunA17_Chr6g0455031 30.882 136 89 1 1 136 217 347 1.80e-16 75.1
Msa0900230 MtrunA17_Chr6g0482111 37.500 112 68 1 29 140 229 338 1.83e-16 75.1
Msa0900230 MtrunA17_Chr8g0343631 35.075 134 81 3 10 140 222 352 1.85e-16 75.1
Msa0900230 MtrunA17_Chr3g0102271 36.364 132 76 2 16 144 217 343 1.95e-16 75.1
Msa0900230 MtrunA17_Chr7g0223531 35.156 128 80 3 19 144 220 346 2.36e-16 74.7
Msa0900230 MtrunA17_Chr3g0084721 33.036 112 74 1 29 140 231 341 2.38e-16 74.7
Msa0900230 MtrunA17_Chr8g0350071 35.593 118 73 3 24 140 1 116 2.57e-16 73.9
Msa0900230 MtrunA17_Chr5g0420341 35.714 126 80 1 19 143 210 335 3.03e-16 74.3
Msa0900230 MtrunA17_Chr4g0005291 31.818 132 82 2 14 142 264 390 3.51e-16 74.3
Msa0900230 MtrunA17_Chr3g0077971 38.053 113 69 1 29 141 217 328 4.05e-16 73.9
Msa0900230 MtrunA17_Chr8g0343611 37.037 135 77 5 10 140 37 167 5.50e-16 73.6
Msa0900230 MtrunA17_Chr6g0454961 33.628 113 75 0 29 141 246 358 7.64e-16 73.2
Msa0900230 MtrunA17_Chr6g0481011 32.143 140 91 2 3 140 210 347 1.02e-15 72.8
Msa0900230 MtrunA17_Chr7g0248121 33.929 112 72 2 29 140 229 338 1.24e-15 72.8
Msa0900230 MtrunA17_Chr2g0296461 31.933 119 78 2 24 140 1 118 2.16e-15 70.1
Msa0900230 MtrunA17_Chr8g0343801 34.959 123 78 2 19 140 215 336 2.17e-15 71.6
Msa0900230 MtrunA17_Chr6g0482321 33.929 112 73 1 29 140 222 332 2.56e-15 71.6
Msa0900230 MtrunA17_Chr6g0455551 36.765 136 86 0 7 142 274 409 2.81e-15 71.6
Msa0900230 MtrunA17_Chr8g0343681 30.709 127 87 1 16 142 241 366 4.36e-15 70.9
Msa0900230 MtrunA17_Chr8g0338981 30.159 126 87 1 15 140 205 329 4.88e-15 70.9
Msa0900230 MtrunA17_Chr2g0298531 33.588 131 78 3 14 143 218 340 5.70e-15 70.9
Msa0900230 MtrunA17_Chr4g0009261 30.252 119 63 1 24 142 1 99 9.59e-15 68.6
Msa0900230 MtrunA17_Chr3g0119001 32.061 131 85 3 14 144 218 344 1.00e-14 70.1
Msa0900230 MtrunA17_Chr5g0442761 36.842 133 84 0 8 140 203 335 1.03e-14 70.1
Msa0900230 MtrunA17_Chr6g0480051 31.967 122 81 2 19 140 2 121 1.19e-14 69.7
Msa0900230 MtrunA17_Chr6g0455251 30.088 113 79 0 29 141 236 348 2.17e-14 68.9
Msa0900230 MtrunA17_Chr6g0482351 39.286 112 66 1 29 140 224 333 2.47e-14 68.9
Msa0900230 MtrunA17_Chr8g0343581 35.000 120 77 1 16 134 257 376 2.64e-14 68.9
Msa0900230 MtrunA17_Chr8g0339021 36.220 127 80 1 19 144 203 329 5.65e-14 67.8
Msa0900230 MtrunA17_Chr8g0338851 33.871 124 67 2 19 141 126 235 6.04e-14 67.8
Msa0900230 MtrunA17_Chr4g0005331 30.400 125 85 1 16 140 277 399 7.21e-14 67.4
Msa0900230 MtrunA17_Chr8g0352221 32.258 124 69 2 19 141 217 326 7.63e-14 67.4
Msa0900230 MtrunA17_Chr3g0084731 31.250 112 76 1 29 140 229 339 9.77e-14 67.0
Msa0900230 MtrunA17_Chr2g0302011 33.071 127 82 3 16 141 233 357 1.01e-13 67.0
Msa0900230 MtrunA17_Chr8g0354721 34.211 114 73 2 29 141 222 334 1.06e-13 67.0
Msa0900230 MtrunA17_Chr8g0370511 35.433 127 81 1 19 144 209 335 1.09e-13 67.0
Msa0900230 MtrunA17_Chr8g0339011 29.508 122 85 1 19 140 205 325 2.15e-13 66.2
Msa0900230 MtrunA17_Chr2g0298291 32.031 128 80 3 16 143 215 335 2.41e-13 66.2
Msa0900230 MtrunA17_Chr8g0350091 34.513 113 71 3 29 140 221 331 2.95e-13 65.5
Msa0900230 MtrunA17_Chr6g0480461 28.191 188 77 6 7 140 208 391 3.47e-13 65.5
Msa0900230 MtrunA17_Chr8g0353401 31.293 147 87 5 3 141 191 331 4.19e-13 65.1
Msa0900230 MtrunA17_Chr6g0480381 33.036 112 73 2 29 140 238 347 7.11e-13 64.7
Msa0900230 MtrunA17_Chr8g0350121 33.628 113 72 3 29 140 223 333 1.07e-12 63.9
Msa0900230 MtrunA17_Chr8g0353351 32.308 130 85 3 14 141 207 335 1.10e-12 63.9
Msa0900230 MtrunA17_Chr6g0482491 35.714 112 71 1 29 140 213 323 1.60e-12 63.5
Msa0900230 MtrunA17_Chr8g0342741 33.607 122 79 2 19 140 206 325 2.10e-12 63.2
Msa0900230 MtrunA17_Chr5g0415821 38.525 122 71 3 9 129 34 152 3.49e-12 60.1
Msa0900230 MtrunA17_Chr2g0330121 30.973 113 75 2 29 140 44 154 5.60e-12 62.0
Msa0900230 MtrunA17_Chr8g0350801 33.929 112 73 1 29 140 224 334 1.18e-11 61.2
Msa0900230 MtrunA17_Chr8g0354711 33.628 113 72 2 29 140 219 329 1.91e-11 60.5
Msa0900230 MtrunA17_Chr8g0338901 30.709 127 88 0 14 140 226 352 2.17e-11 60.5
Msa0900230 MtrunA17_Chr6g0482471 36.607 112 69 1 29 140 224 333 4.03e-11 59.7
Msa0900230 MtrunA17_Chr8g0342781 32.787 122 80 2 19 140 206 325 4.42e-11 59.3
Msa0900230 MtrunA17_Chr4g0020591 30.435 115 78 2 29 142 225 338 5.86e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0900230 AT5G17680.1 36.000 125 79 1 16 140 206 329 2.69e-24 97.8
Msa0900230 AT5G17680.2 36.000 125 79 1 16 140 207 330 2.69e-24 97.8
Msa0900230 AT5G48770.1 41.463 123 69 2 19 140 211 331 3.12e-23 94.7
Msa0900230 AT1G63870.1 33.803 142 89 2 2 142 196 333 4.65e-21 88.6
Msa0900230 AT5G41750.1 38.889 144 77 4 1 141 196 331 4.76e-21 88.6
Msa0900230 AT5G41750.2 38.889 144 77 4 1 141 196 331 4.76e-21 88.6
Msa0900230 AT1G63860.4 35.417 144 87 4 2 143 193 332 5.49e-20 85.5
Msa0900230 AT1G63860.5 35.417 144 87 4 2 143 193 332 5.49e-20 85.5
Msa0900230 AT1G63860.3 35.417 144 87 4 2 143 193 332 5.49e-20 85.5
Msa0900230 AT1G63860.2 35.417 144 87 4 2 143 193 332 5.52e-20 85.5
Msa0900230 AT1G63860.6 35.417 144 87 4 2 143 193 332 5.95e-20 85.5
Msa0900230 AT1G63860.1 35.417 144 87 4 2 143 193 332 6.27e-20 85.5
Msa0900230 AT1G17600.1 32.800 125 84 0 16 140 205 329 3.88e-19 83.2
Msa0900230 AT1G63880.2 35.766 137 79 4 10 142 203 334 4.97e-19 82.8
Msa0900230 AT1G63880.1 35.766 137 79 4 10 142 203 334 6.22e-19 82.4
Msa0900230 AT5G58120.1 35.036 137 81 3 10 142 204 336 6.67e-19 82.4
Msa0900230 AT5G41740.2 38.621 145 77 5 1 141 186 322 7.10e-19 82.4
Msa0900230 AT5G41740.1 38.621 145 77 5 1 141 186 322 7.42e-19 82.4
Msa0900230 AT5G41740.3 38.621 145 77 5 1 141 34 170 7.97e-19 82.0
Msa0900230 AT1G72890.2 33.835 133 84 2 9 140 254 383 2.19e-18 80.9
Msa0900230 AT5G48780.2 32.857 140 89 1 1 140 419 553 3.02e-18 80.5
Msa0900230 AT5G48780.1 32.857 140 89 1 1 140 449 583 3.05e-18 80.5
Msa0900230 AT1G72890.1 33.835 133 84 2 9 140 228 357 3.23e-18 80.1
Msa0900230 AT1G17610.1 32.394 142 82 3 1 140 185 314 5.76e-18 79.3
Msa0900230 AT1G17610.2 32.394 142 82 3 1 140 185 314 5.76e-18 79.3
Msa0900230 AT4G09420.1 30.986 142 93 2 3 143 217 354 6.29e-18 79.3
Msa0900230 AT5G38350.1 35.971 139 77 4 10 141 41 174 6.91e-18 79.3
Msa0900230 AT5G18370.1 35.484 155 82 5 1 141 244 394 8.26e-18 79.3
Msa0900230 AT5G44870.1 37.037 135 83 2 7 141 268 400 8.40e-18 79.3
Msa0900230 AT1G65850.2 34.074 135 78 2 14 141 241 371 8.66e-18 79.3
Msa0900230 AT5G38340.3 33.083 133 78 2 16 141 252 380 9.92e-18 79.0
Msa0900230 AT5G38340.1 33.083 133 78 2 16 141 252 380 9.92e-18 79.0
Msa0900230 AT5G38340.2 33.083 133 78 2 16 141 46 174 1.26e-17 78.6
Msa0900230 AT1G27170.2 33.333 138 83 2 11 144 206 338 1.34e-17 78.6
Msa0900230 AT1G65850.3 34.815 135 77 3 14 141 116 246 1.35e-17 78.6
Msa0900230 AT1G65850.1 34.815 135 77 3 14 141 226 356 1.44e-17 78.6
Msa0900230 AT5G41540.1 34.266 143 84 4 4 141 194 331 1.53e-17 78.6
Msa0900230 AT5G44870.2 37.037 135 83 2 7 141 4 136 1.56e-17 78.6
Msa0900230 AT1G56510.1 35.338 133 77 5 14 142 205 332 1.56e-17 78.6
Msa0900230 AT1G27170.1 33.333 138 83 2 11 144 206 338 1.56e-17 78.6
Msa0900230 AT4G16890.4 34.586 133 82 3 10 141 53 181 2.30e-17 77.8
Msa0900230 AT4G16890.3 34.586 133 82 3 10 141 199 327 2.35e-17 77.8
Msa0900230 AT4G16890.2 34.586 133 82 3 10 141 208 336 2.35e-17 77.8
Msa0900230 AT4G16890.5 34.586 133 82 3 10 141 199 327 2.35e-17 77.8
Msa0900230 AT4G16890.1 34.586 133 82 3 10 141 208 336 2.40e-17 77.8
Msa0900230 AT3G44670.1 36.301 146 83 4 1 141 275 415 2.77e-17 77.8
Msa0900230 AT3G44670.2 36.301 146 83 4 1 141 275 415 2.77e-17 77.8
Msa0900230 AT4G16920.2 33.083 133 84 3 10 141 197 325 3.92e-17 77.4
Msa0900230 AT4G16920.8 33.083 133 84 3 10 141 197 325 3.92e-17 77.4
Msa0900230 AT4G16920.3 33.083 133 84 3 10 141 197 325 4.15e-17 77.4
Msa0900230 AT4G16920.5 33.083 133 84 3 10 141 197 325 4.15e-17 77.4
Msa0900230 AT4G16920.6 33.083 133 84 3 10 141 197 325 4.61e-17 77.0
Msa0900230 AT4G16920.4 33.083 133 84 3 10 141 197 325 4.74e-17 77.0
Msa0900230 AT4G16920.7 33.083 133 84 3 10 141 197 325 4.74e-17 77.0
Msa0900230 AT1G64070.1 34.586 133 79 4 14 142 206 334 5.91e-17 76.6
Msa0900230 AT4G16920.1 33.083 133 84 3 10 141 197 325 6.33e-17 76.6
Msa0900230 AT4G16920.9 33.083 133 84 3 10 141 197 325 6.46e-17 76.6
Msa0900230 AT5G41550.1 35.878 131 82 1 14 142 205 335 8.93e-17 76.3
Msa0900230 AT5G40060.2 35.461 141 76 5 10 140 7 142 9.32e-17 76.3
Msa0900230 AT5G44510.3 32.836 134 81 4 13 141 231 360 9.61e-17 76.3
Msa0900230 AT5G44510.2 32.836 134 81 4 13 141 231 360 9.61e-17 76.3
Msa0900230 AT5G44510.1 32.836 134 81 4 13 141 231 360 9.72e-17 76.3
Msa0900230 AT4G16860.2 33.083 133 84 3 10 141 39 167 9.94e-17 76.3
Msa0900230 AT4G16860.1 33.083 133 84 3 10 141 201 329 1.01e-16 76.3
Msa0900230 AT5G44510.4 32.836 134 81 4 13 141 231 360 1.14e-16 75.9
Msa0900230 AT3G04210.2 35.075 134 78 2 13 141 258 387 1.28e-16 75.9
Msa0900230 AT3G04210.1 35.075 134 78 2 13 141 258 387 1.28e-16 75.9
Msa0900230 AT3G44480.3 34.932 146 85 4 1 141 279 419 1.37e-16 75.9
Msa0900230 AT3G44480.5 34.932 146 85 4 1 141 279 419 1.37e-16 75.9
Msa0900230 AT5G18360.1 30.822 146 91 3 1 141 193 333 1.45e-16 75.5
Msa0900230 AT3G44480.4 34.932 146 85 4 1 141 279 419 1.50e-16 75.5
Msa0900230 AT3G44480.1 34.932 146 85 4 1 141 279 419 1.50e-16 75.5
Msa0900230 AT4G12010.1 34.328 134 85 2 9 141 202 333 1.93e-16 75.5
Msa0900230 AT5G40910.2 35.507 138 82 4 4 141 11 141 1.94e-16 75.5
Msa0900230 AT5G40910.3 35.507 138 82 4 4 141 11 141 1.94e-16 75.5
Msa0900230 AT5G40910.5 35.507 138 82 4 4 141 11 141 1.94e-16 75.5
Msa0900230 AT5G40910.7 35.507 138 82 4 4 141 11 141 1.94e-16 75.5
Msa0900230 AT5G40910.8 35.507 138 82 4 4 141 11 141 1.94e-16 75.5
Msa0900230 AT3G44480.2 34.932 146 85 4 1 141 279 419 1.95e-16 75.5
Msa0900230 AT5G40910.6 35.507 138 82 4 4 141 11 141 2.16e-16 75.1
Msa0900230 AT5G40910.4 35.507 138 82 4 4 141 11 141 2.16e-16 75.1
Msa0900230 AT5G40060.1 36.170 141 75 6 10 140 7 142 2.37e-16 75.1
Msa0900230 AT4G16940.6 32.353 136 87 3 7 141 156 287 3.36e-16 74.7
Msa0900230 AT4G16940.2 32.353 136 87 3 7 141 156 287 3.36e-16 74.7
Msa0900230 AT4G16940.3 32.353 136 87 3 7 141 156 287 3.36e-16 74.7
Msa0900230 AT4G16940.5 32.353 136 87 3 7 141 156 287 3.36e-16 74.7
Msa0900230 AT5G18350.1 36.709 158 75 6 1 141 203 352 3.89e-16 74.3
Msa0900230 AT3G51560.1 37.984 129 72 3 15 140 179 302 4.86e-16 74.3
Msa0900230 AT4G16940.1 32.353 136 87 3 7 141 156 287 5.16e-16 73.9
Msa0900230 AT4G16940.4 32.353 136 87 3 7 141 156 287 5.17e-16 73.9
Msa0900230 AT5G49140.1 35.115 131 80 2 14 140 205 334 5.66e-16 73.9
Msa0900230 AT4G16950.6 33.333 126 79 3 17 141 210 331 6.78e-16 73.9
Msa0900230 AT4G16950.5 33.333 126 79 3 17 141 210 331 7.12e-16 73.6
Msa0900230 AT4G16950.1 33.333 126 79 3 17 141 210 331 7.15e-16 73.6
Msa0900230 AT5G11250.2 33.333 135 80 3 13 141 254 384 7.40e-16 73.6
Msa0900230 AT5G36930.2 38.406 138 78 4 8 142 202 335 7.47e-16 73.6
Msa0900230 AT4G16950.4 33.333 126 79 3 17 141 210 331 7.62e-16 73.6
Msa0900230 AT4G16950.3 33.333 126 79 3 17 141 210 331 7.65e-16 73.6
Msa0900230 AT5G36930.4 38.406 138 78 4 8 142 199 332 7.69e-16 73.6
Msa0900230 AT5G36930.1 38.406 138 78 4 8 142 199 332 7.69e-16 73.6
Msa0900230 AT5G40910.1 35.156 128 77 3 14 141 204 325 7.95e-16 73.6
Msa0900230 AT5G40910.9 35.156 128 77 3 14 141 204 325 7.95e-16 73.6
Msa0900230 AT3G44630.2 34.932 146 85 4 1 141 275 415 8.01e-16 73.6
Msa0900230 AT3G44630.1 34.932 146 85 4 1 141 275 415 8.01e-16 73.6
Msa0900230 AT3G44630.4 34.932 146 85 4 1 141 275 415 8.01e-16 73.6
Msa0900230 AT1G72840.4 35.714 112 68 2 29 140 59 166 8.05e-16 73.6
Msa0900230 AT4G16950.2 33.333 126 79 3 17 141 210 331 8.09e-16 73.6
Msa0900230 AT3G44630.3 34.932 146 85 4 1 141 275 415 8.50e-16 73.6
Msa0900230 AT5G11250.3 33.333 135 80 3 13 141 172 302 8.84e-16 73.6
Msa0900230 AT5G11250.1 33.333 135 80 3 13 141 172 302 8.84e-16 73.6
Msa0900230 AT3G44400.2 32.836 134 81 3 13 141 231 360 9.57e-16 73.2
Msa0900230 AT3G44400.1 32.836 134 81 3 13 141 231 360 9.57e-16 73.2
Msa0900230 AT3G44400.4 32.836 134 81 3 13 141 231 360 9.57e-16 73.2
Msa0900230 AT3G44400.5 32.836 134 81 3 13 141 231 360 9.57e-16 73.2
Msa0900230 AT3G44400.3 32.836 134 81 3 13 141 231 360 9.57e-16 73.2
Msa0900230 AT4G16960.1 32.331 133 85 3 10 141 203 331 1.54e-15 72.8
Msa0900230 AT1G72840.2 35.714 112 68 2 29 140 225 332 1.59e-15 72.8
Msa0900230 AT1G72840.3 35.714 112 68 2 29 140 225 332 1.59e-15 72.8
Msa0900230 AT1G27180.1 33.813 139 82 3 11 144 379 512 1.63e-15 72.8
Msa0900230 AT1G72840.1 35.714 112 68 2 29 140 225 332 1.68e-15 72.8
Msa0900230 AT4G11170.1 32.824 131 79 3 15 140 204 330 1.76e-15 72.4
Msa0900230 AT5G36930.3 38.406 138 78 4 8 142 199 332 1.76e-15 72.4
Msa0900230 AT3G04220.2 32.836 134 80 2 14 141 256 385 1.88e-15 72.4
Msa0900230 AT1G27180.5 33.813 139 82 3 11 144 215 348 1.89e-15 72.4
Msa0900230 AT1G27180.8 33.813 139 82 3 11 144 215 348 1.89e-15 72.4
Msa0900230 AT1G27180.7 33.813 139 82 3 11 144 41 174 1.91e-15 72.4
Msa0900230 AT1G27180.6 33.813 139 82 3 11 144 41 174 1.91e-15 72.4
Msa0900230 AT1G27180.4 33.813 139 82 3 11 144 41 174 1.91e-15 72.4
Msa0900230 AT1G66090.1 35.766 137 77 5 9 140 214 344 1.91e-15 72.4
Msa0900230 AT1G27180.2 33.813 139 82 3 11 144 217 350 1.93e-15 72.4
Msa0900230 AT1G27180.3 33.813 139 82 3 11 144 217 350 2.07e-15 72.4
Msa0900230 AT4G14370.2 35.036 137 81 3 10 142 203 335 2.48e-15 72.0
Msa0900230 AT4G14370.3 35.036 137 81 3 10 142 203 335 2.48e-15 72.0
Msa0900230 AT4G14370.1 35.036 137 81 3 10 142 160 292 2.52e-15 72.0
Msa0900230 AT5G40090.1 33.858 127 71 2 16 140 203 318 2.90e-15 71.6
Msa0900230 AT5G51630.5 32.812 128 82 1 14 141 140 263 3.32e-15 71.6
Msa0900230 AT5G17880.1 33.577 137 90 1 4 140 214 349 3.34e-15 71.6
Msa0900230 AT1G56520.2 32.374 139 88 2 2 140 198 330 3.36e-15 71.6
Msa0900230 AT5G17880.2 33.577 137 90 1 4 140 214 349 3.54e-15 71.6
Msa0900230 AT1G56520.5 32.374 139 88 2 2 140 198 330 3.85e-15 71.6
Msa0900230 AT3G04220.3 34.058 138 80 4 10 141 253 385 4.11e-15 71.6
Msa0900230 AT5G51630.1 33.600 125 79 1 17 141 207 327 4.31e-15 71.6
Msa0900230 AT5G51630.4 33.600 125 79 1 17 141 143 263 4.33e-15 71.6
Msa0900230 AT5G51630.6 33.600 125 79 1 17 141 143 263 4.33e-15 71.6
Msa0900230 AT5G51630.2 33.600 125 79 1 17 141 143 263 4.34e-15 71.6
Msa0900230 AT3G04220.1 33.333 138 81 3 10 141 253 385 4.74e-15 71.2
Msa0900230 AT1G56540.2 33.835 133 79 3 14 142 43 170 5.26e-15 71.2
Msa0900230 AT1G56540.1 33.835 133 79 3 14 142 207 334 5.38e-15 71.2
Msa0900230 AT4G36140.1 32.117 137 86 3 10 142 284 417 6.33e-15 70.9
Msa0900230 AT4G36140.1 37.984 129 74 4 15 141 601 725 1.21e-14 70.1
Msa0900230 AT4G36140.2 32.117 137 86 3 10 142 99 232 6.34e-15 70.9
Msa0900230 AT4G36140.2 37.984 129 74 4 15 141 416 540 1.20e-14 70.1
Msa0900230 AT1G56520.4 32.374 139 88 2 2 140 198 330 7.22e-15 70.9
Msa0900230 AT1G56520.1 32.374 139 88 2 2 140 198 330 7.34e-15 70.9
Msa0900230 AT1G56520.3 33.071 127 84 1 14 140 43 168 7.75e-15 70.9
Msa0900230 AT1G17615.1 32.824 131 82 2 10 140 207 331 1.34e-14 69.7
Msa0900230 AT5G45260.2 35.714 126 73 3 15 140 171 288 1.90e-14 69.7
Msa0900230 AT5G45260.3 35.714 126 73 3 15 140 171 288 1.90e-14 69.7
Msa0900230 AT5G45260.1 35.714 126 73 3 15 140 171 288 1.91e-14 69.7
Msa0900230 AT1G63730.1 32.353 136 86 2 10 142 202 334 2.10e-14 69.3
Msa0900230 AT4G19520.1 35.200 125 71 3 16 140 190 304 2.15e-14 69.3
Msa0900230 AT4G19520.5 35.200 125 71 3 16 140 190 304 2.33e-14 69.3
Msa0900230 AT4G19520.3 35.200 125 71 3 16 140 190 304 2.46e-14 69.3
Msa0900230 AT4G19520.2 35.200 125 71 3 16 140 190 304 3.09e-14 68.9
Msa0900230 AT4G19520.4 35.200 125 71 3 16 140 190 304 3.09e-14 68.9
Msa0900230 AT4G16990.9 31.746 126 82 1 16 141 202 323 5.46e-14 68.2
Msa0900230 AT4G16990.17 31.746 126 82 1 16 141 202 323 5.51e-14 68.2
Msa0900230 AT4G16990.10 31.746 126 82 1 16 141 202 323 5.51e-14 68.2
Msa0900230 AT4G16990.13 31.746 126 82 1 16 141 202 323 5.62e-14 68.2
Msa0900230 AT4G16990.2 31.746 126 82 1 16 141 202 323 5.62e-14 68.2
Msa0900230 AT4G16990.12 31.746 126 82 1 16 141 202 323 5.96e-14 68.2
Msa0900230 AT4G16990.7 31.746 126 82 1 16 141 202 323 5.96e-14 68.2
Msa0900230 AT4G16990.8 31.746 126 82 1 16 141 269 390 6.01e-14 68.2
Msa0900230 AT4G16990.6 31.746 126 82 1 16 141 202 323 6.29e-14 68.2
Msa0900230 AT4G16990.11 31.746 126 82 1 16 141 202 323 6.29e-14 68.2
Msa0900230 AT4G16990.1 31.746 126 82 1 16 141 202 323 6.35e-14 68.2
Msa0900230 AT1G63750.3 33.088 136 84 2 10 142 207 338 6.40e-14 68.2
Msa0900230 AT1G63750.1 33.088 136 84 2 10 142 40 171 6.63e-14 68.2
Msa0900230 AT1G63750.2 33.088 136 84 2 10 142 40 171 6.63e-14 68.2
Msa0900230 AT4G16990.5 31.746 126 82 1 16 141 44 165 6.88e-14 67.8
Msa0900230 AT4G16990.3 31.746 126 82 1 16 141 44 165 7.01e-14 67.8
Msa0900230 AT4G16990.4 31.746 126 82 1 16 141 44 165 7.02e-14 67.8
Msa0900230 AT4G16990.14 31.746 126 82 1 16 141 44 165 7.02e-14 67.8
Msa0900230 AT4G16990.15 31.746 126 82 1 16 141 44 165 7.02e-14 67.8
Msa0900230 AT4G16990.19 31.746 126 82 1 16 141 44 165 7.02e-14 67.8
Msa0900230 AT4G16990.16 31.746 126 82 1 16 141 44 165 7.36e-14 67.8
Msa0900230 AT4G16990.18 31.746 126 82 1 16 141 44 165 7.36e-14 67.8
Msa0900230 AT2G14080.1 34.014 147 86 4 1 141 237 378 7.44e-14 67.8
Msa0900230 AT4G09430.1 36.800 125 75 1 16 140 208 328 7.47e-14 67.8
Msa0900230 AT1G69550.1 34.532 139 81 4 10 143 270 403 8.20e-14 67.8
Msa0900230 AT2G14080.2 34.014 147 86 4 1 141 104 245 8.52e-14 67.8
Msa0900230 AT5G46270.3 30.882 136 80 4 16 141 203 334 8.63e-14 67.8
Msa0900230 AT5G46270.2 30.882 136 80 4 16 141 203 334 8.64e-14 67.8
Msa0900230 AT5G46270.1 30.882 136 80 4 16 141 214 345 8.72e-14 67.8
Msa0900230 AT5G46270.5 30.882 136 80 4 16 141 214 345 8.72e-14 67.8
Msa0900230 AT5G46270.4 30.882 136 80 4 16 141 214 345 8.73e-14 67.8
Msa0900230 AT2G16870.1 32.331 133 81 4 14 141 204 332 8.96e-14 67.8
Msa0900230 AT5G45050.4 30.159 126 83 1 16 141 24 144 9.67e-14 67.8
Msa0900230 AT1G63740.1 32.331 133 90 0 10 142 160 292 9.68e-14 67.4
Msa0900230 AT1G63740.2 32.331 133 90 0 10 142 231 363 1.12e-13 67.4
Msa0900230 AT5G45050.1 30.159 126 83 1 16 141 163 283 1.17e-13 67.4
Msa0900230 AT5G45050.2 30.159 126 83 1 16 141 163 283 1.18e-13 67.4
Msa0900230 AT5G45050.3 30.159 126 83 1 16 141 163 283 1.60e-13 67.0
Msa0900230 AT5G38850.1 33.083 133 80 3 14 142 197 324 1.69e-13 67.0
Msa0900230 AT1G72860.2 37.410 139 80 3 9 143 199 334 2.41e-13 66.6
Msa0900230 AT1G72860.1 37.410 139 80 3 9 143 199 334 2.76e-13 66.2
Msa0900230 AT1G72860.3 37.410 139 80 3 9 143 199 334 2.89e-13 66.2
Msa0900230 AT4G08450.1 32.374 139 78 4 16 143 202 335 2.91e-13 66.2
Msa0900230 AT4G08450.2 32.374 139 78 4 16 143 202 335 3.17e-13 66.2
Msa0900230 AT4G12020.2 31.655 139 86 3 4 140 829 960 7.75e-13 65.1
Msa0900230 AT4G12020.4 31.655 139 86 3 4 140 829 960 7.97e-13 65.1
Msa0900230 AT5G46450.1 31.655 139 76 3 14 141 205 335 8.51e-13 64.7
Msa0900230 AT5G46450.3 31.655 139 76 3 14 141 205 335 8.65e-13 64.7
Msa0900230 AT4G09360.1 38.636 132 78 2 9 140 13 141 9.31e-13 64.7
Msa0900230 AT4G12020.10 31.655 139 86 3 4 140 829 960 9.39e-13 64.7
Msa0900230 AT4G12020.3 31.655 139 86 3 4 140 829 960 9.39e-13 64.7
Msa0900230 AT4G12020.7 31.655 139 86 3 4 140 829 960 9.56e-13 64.7
Msa0900230 AT4G12020.5 31.655 139 86 3 4 140 762 893 9.56e-13 64.7
Msa0900230 AT4G12020.1 31.655 139 86 3 4 140 829 960 9.65e-13 64.7
Msa0900230 AT4G12020.9 31.655 139 86 3 4 140 829 960 9.65e-13 64.7
Msa0900230 AT4G19510.3 31.579 133 86 2 10 142 248 375 1.03e-12 64.7
Msa0900230 AT4G12020.6 31.655 139 86 3 4 140 829 960 1.08e-12 64.7
Msa0900230 AT4G12020.8 31.655 139 86 3 4 140 829 960 1.08e-12 64.7
Msa0900230 AT5G17890.1 32.800 125 83 1 16 140 189 312 1.10e-12 64.7
Msa0900230 AT4G19510.10 31.579 133 86 2 10 142 208 335 1.20e-12 64.3
Msa0900230 AT4G19510.8 31.579 133 86 2 10 142 248 375 1.22e-12 64.3
Msa0900230 AT4G19510.1 31.579 133 86 2 10 142 248 375 1.22e-12 64.3
Msa0900230 AT4G19510.2 31.579 133 86 2 10 142 208 335 1.24e-12 64.3
Msa0900230 AT4G19510.5 31.579 133 86 2 10 142 248 375 1.27e-12 64.3
Msa0900230 AT4G19510.4 31.579 133 86 2 10 142 248 375 1.27e-12 64.3
Msa0900230 AT4G19510.7 31.579 133 86 2 10 142 248 375 1.27e-12 64.3
Msa0900230 AT5G17970.1 27.586 145 72 3 16 141 211 341 1.32e-12 64.3
Msa0900230 AT5G45200.3 33.333 138 87 3 7 141 228 363 1.47e-12 64.3
Msa0900230 AT3G25510.2 30.370 135 81 3 13 140 16 144 2.02e-12 63.9
Msa0900230 AT3G25510.1 30.370 135 81 3 13 140 16 144 2.02e-12 63.9
Msa0900230 AT5G45200.1 33.333 138 87 3 7 141 228 363 2.03e-12 63.9
Msa0900230 AT1G72870.1 34.328 134 76 3 10 141 268 391 2.50e-12 63.5
Msa0900230 AT4G36150.1 31.429 140 82 4 4 141 231 358 2.94e-12 63.2
Msa0900230 AT4G12020.11 31.387 137 85 3 6 140 831 960 4.78e-12 62.8
Msa0900230 AT5G40100.1 33.929 112 72 2 29 140 221 330 4.98e-12 62.8
Msa0900230 AT5G46260.1 31.111 135 79 4 16 140 203 333 7.01e-12 62.4
Msa0900230 AT5G22690.4 30.405 148 82 4 4 141 200 336 1.79e-11 61.2
Msa0900230 AT5G22690.3 30.405 148 82 4 4 141 200 336 1.89e-11 60.8
Msa0900230 AT5G22690.2 30.464 151 84 4 1 141 197 336 2.91e-11 60.5
Msa0900230 AT5G22690.1 30.464 151 84 4 1 141 197 336 3.52e-11 60.1
Msa0900230 AT1G72950.1 30.075 133 78 2 9 140 201 319 3.99e-11 59.7
Msa0900230 AT1G31540.2 31.852 135 78 3 16 140 204 334 5.61e-11 59.7
Msa0900230 AT5G46470.1 30.147 136 80 4 16 141 208 338 5.76e-11 59.7
Msa0900230 AT1G31540.3 31.852 135 78 3 16 140 204 334 8.01e-11 59.3
Msa0900230 AT1G31540.1 31.852 135 78 3 16 140 204 334 8.01e-11 59.3
Msa0900230 AT3G51570.2 29.496 139 90 2 4 142 225 355 9.64e-11 58.9
Msa0900230 AT3G51570.1 29.496 139 90 2 4 142 225 355 9.85e-11 58.9

Find 28 sgRNAs with CRISPR-Local

Find 33 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTGTAATGATTGCAAATT+TGG 0.166475 6_1:+95712965 None:intergenic
ACCCTTGCTATGGATTTATA+TGG 0.301145 6_1:-95713114 Msa0900230:CDS
ATTTGTGGGATGGGAGGAAT+AGG 0.308136 6_1:-95713144 Msa0900230:CDS
GGCAAAATCTCTCATCGATT+TGG 0.346696 6_1:-95713093 Msa0900230:CDS
GTTGATGGTGTTCGTGCTAT+AGG 0.393529 6_1:-95713168 Msa0900230:CDS
TTACTTTAGGACTCGGTTGA+TGG 0.406764 6_1:-95713183 Msa0900230:intron
GTTTACGTCATCGATGAAAC+AGG 0.415274 6_1:+95713065 None:intergenic
ATGAGCATATATTGAAAGAA+TGG 0.423871 6_1:-95712798 Msa0900230:CDS
AAATAGGTGTGCATCGTGAA+TGG 0.483244 6_1:-95712858 Msa0900230:CDS
GTTCGTGCTATAGGAATTTG+TGG 0.501540 6_1:-95713159 Msa0900230:CDS
TGCCATATAAATCCATAGCA+AGG 0.505034 6_1:+95713112 None:intergenic
AGGGAAGACAACCCTTGCTA+TGG 0.523012 6_1:-95713124 Msa0900230:CDS
TTTGTGGGATGGGAGGAATA+GGG 0.526973 6_1:-95713143 Msa0900230:CDS
ATGTAGGCTACGTCATGAAA+AGG 0.527057 6_1:-95712926 Msa0900230:CDS
TGCTATAGGAATTTGTGGGA+TGG 0.544410 6_1:-95713154 Msa0900230:CDS
TAAACTTTCAGGCCACAAGC+TGG 0.545328 6_1:-95713301 None:intergenic
GCTATAGGAATTTGTGGGAT+GGG 0.549360 6_1:-95713153 Msa0900230:CDS
GCCATATAAATCCATAGCAA+GGG 0.549482 6_1:+95713113 None:intergenic
CAACTGATTTGATACGATGT+AGG 0.554196 6_1:-95712942 Msa0900230:CDS
CAAATCATACTTCAAACTCT+CGG 0.557120 6_1:-95713000 Msa0900230:CDS
CCTTCTGATTCTTGATAATG+TGG 0.564555 6_1:-95712902 Msa0900230:CDS
AAAATTTGTAGATCACATGA+TGG 0.586356 6_1:-95713042 Msa0900230:CDS
ATAGGAATTTGTGGGATGGG+AGG 0.587948 6_1:-95713150 Msa0900230:CDS
CCACATTATCAAGAATCAGA+AGG 0.590043 6_1:+95712902 None:intergenic
TTCGTGCTATAGGAATTTGT+GGG 0.590932 6_1:-95713158 Msa0900230:CDS
CATCGTGAATGGCTAGGTGC+AGG 0.604211 6_1:-95712847 Msa0900230:CDS
CACATTATCAAGAATCAGAA+GGG 0.618268 6_1:+95712903 None:intergenic
GGTGTGCATCGTGAATGGCT+AGG 0.742552 6_1:-95712853 Msa0900230:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTACAAAATCATTTACTTT+AGG - chr6_1:95712889-95712908 Msa0900230:CDS 15.0%
!! GTTGAACAACTAAAAAAAAT+AGG - chr6_1:95713211-95713230 Msa0900230:intron 20.0%
!!! AAATCATTTACTTTAGGACT+CGG - chr6_1:95712895-95712914 Msa0900230:CDS 25.0%
! AAAATTTGTAGATCACATGA+TGG - chr6_1:95713043-95713062 Msa0900230:CDS 25.0%
! ATGAGCATATATTGAAAGAA+TGG - chr6_1:95713287-95713306 Msa0900230:five_prime_UTR 25.0%
CAAATCATACTTCAAACTCT+CGG - chr6_1:95713085-95713104 Msa0900230:CDS 30.0%
CACTGTAATGATTGCAAATT+TGG + chr6_1:95713123-95713142 None:intergenic 30.0%
CACATTATCAAGAATCAGAA+GGG + chr6_1:95713185-95713204 None:intergenic 30.0%
! TTTTTAATCTCTCCAGCTTG+TGG + chr6_1:95712799-95712818 None:intergenic 35.0%
TTCGTGCTATAGGAATTTGT+GGG - chr6_1:95712927-95712946 Msa0900230:CDS 35.0%
! ACCCTTGCTATGGATTTATA+TGG - chr6_1:95712971-95712990 Msa0900230:CDS 35.0%
GCCATATAAATCCATAGCAA+GGG + chr6_1:95712975-95712994 None:intergenic 35.0%
TGCCATATAAATCCATAGCA+AGG + chr6_1:95712976-95712995 None:intergenic 35.0%
!!! GTATGATTTGCTTTTGTGCA+CGG + chr6_1:95713075-95713094 None:intergenic 35.0%
!! CAACTGATTTGATACGATGT+AGG - chr6_1:95713143-95713162 Msa0900230:CDS 35.0%
CCACATTATCAAGAATCAGA+AGG + chr6_1:95713186-95713205 None:intergenic 35.0%
!! CCTTCTGATTCTTGATAATG+TGG - chr6_1:95713183-95713202 Msa0900230:intron 35.0%
!! TTACTTTAGGACTCGGTTGA+TGG - chr6_1:95712902-95712921 Msa0900230:CDS 40.0%
GTTCGTGCTATAGGAATTTG+TGG - chr6_1:95712926-95712945 Msa0900230:CDS 40.0%
TGCTATAGGAATTTGTGGGA+TGG - chr6_1:95712931-95712950 Msa0900230:CDS 40.0%
GCTATAGGAATTTGTGGGAT+GGG - chr6_1:95712932-95712951 Msa0900230:CDS 40.0%
! GGCAAAATCTCTCATCGATT+TGG - chr6_1:95712992-95713011 Msa0900230:CDS 40.0%
GTTTACGTCATCGATGAAAC+AGG + chr6_1:95713023-95713042 None:intergenic 40.0%
ATGTAGGCTACGTCATGAAA+AGG - chr6_1:95713159-95713178 Msa0900230:CDS 40.0%
AAATAGGTGTGCATCGTGAA+TGG - chr6_1:95713227-95713246 Msa0900230:intron 40.0%
!! GTTGATGGTGTTCGTGCTAT+AGG - chr6_1:95712917-95712936 Msa0900230:CDS 45.0%
ATAGGAATTTGTGGGATGGG+AGG - chr6_1:95712935-95712954 Msa0900230:CDS 45.0%
ATTTGTGGGATGGGAGGAAT+AGG - chr6_1:95712941-95712960 Msa0900230:CDS 45.0%
TTTGTGGGATGGGAGGAATA+GGG - chr6_1:95712942-95712961 Msa0900230:CDS 45.0%
!! ATTTGCTTTTGTGCACGGAG+TGG + chr6_1:95713070-95713089 None:intergenic 45.0%
AGGGAAGACAACCCTTGCTA+TGG - chr6_1:95712961-95712980 Msa0900230:CDS 50.0%
GGTGTGCATCGTGAATGGCT+AGG - chr6_1:95713232-95713251 Msa0900230:intron 55.0%
CATCGTGAATGGCTAGGTGC+AGG - chr6_1:95713238-95713257 Msa0900230:intron 55.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 95712795 95713312 95712795 ID=Msa0900230;Name=Msa0900230
chr6_1 mRNA 95712795 95713312 95712795 ID=Msa0900230-mRNA-1;Parent=Msa0900230;Name=Msa0900230-mRNA-1;_AED=0.24;_eAED=0.31;_QI=40|0|0|1|0|0.5|2|0|144
chr6_1 exon 95713243 95713312 95713243 ID=Msa0900230-mRNA-1:exon:16583;Parent=Msa0900230-mRNA-1
chr6_1 exon 95712795 95713196 95712795 ID=Msa0900230-mRNA-1:exon:16582;Parent=Msa0900230-mRNA-1
chr6_1 five_prime_UTR 95713273 95713312 95713273 ID=Msa0900230-mRNA-1:five_prime_utr;Parent=Msa0900230-mRNA-1
chr6_1 CDS 95713243 95713272 95713243 ID=Msa0900230-mRNA-1:cds;Parent=Msa0900230-mRNA-1
chr6_1 CDS 95712795 95713196 95712795 ID=Msa0900230-mRNA-1:cds;Parent=Msa0900230-mRNA-1
Gene Sequence

>Msa0900230

ATGAATATACTTGATTGCAAATCTTCACTCGACTCGGTTGATGGTGTTCGTGCTATAGGAATTTGTGGGATGGGAGGAATAGGGAAGACAACCCTTGCTATGGATTTATATGGCAAAATCTCTCATCGATTTGGTGCATCCTGTTTCATCGATGACGTAAACAAAATTTGTAGATCACATGATGGTCCACTCCGTGCACAAAAGCAAATCATACTTCAAACTCTCGGCATAGAAAACAACCAAATTTGCAATCATTACAGTGCAACTGATTTGATACGATGTAGGCTACGTCATGAAAAGGCCCTTCTGATTCTTGATAATGTGGAACAAGTTGAACAACTAAAAAAAATAGGTGTGCATCGTGAATGGCTAGGTGCAGGTAGTAGAATCGTTATTATTTCTAGAGATGAGCATATATTGAAAGAATGGAGT
Protein sequence

>Msa0900230

MNILDCKSSLDSVDGVRAIGICGMGGIGKTTLAMDLYGKISHRFGASCFIDDVNKICRSHDGPLRAQKQIILQTLGIENNQICNHYSATDLIRCRLRHEKALLILDNVEQVEQLKKIGVHREWLGAGSRIVIISRDEHILKEWS