Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1000860 | ABD32667.1 | 49.074 | 216 | 77 | 3 | 48 | 259 | 28 | 214 | 2.19e-52 | 180 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1000860 | sp|Q9CA59|NRP1_ARATH | 38.415 | 164 | 92 | 4 | 90 | 249 | 69 | 227 | 1.59e-25 | 104 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1000860 | Q2HTG4 | 49.074 | 216 | 77 | 3 | 48 | 259 | 28 | 214 | 1.04e-52 | 180 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa1000860 | 0.808391 | 3.169506e-50 | -8.615850e-47 |
| Msa0006110 | Msa1000860 | 0.808979 | 2.373080e-50 | -8.615850e-47 |
| Msa0011170 | Msa1000860 | 0.840561 | 8.071795e-58 | -8.615850e-47 |
| Msa0011660 | Msa1000860 | -0.812032 | 5.199125e-51 | -8.615850e-47 |
| Msa0014710 | Msa1000860 | 0.854152 | 1.488442e-61 | -8.615850e-47 |
| Msa0015390 | Msa1000860 | 0.805057 | 1.604314e-49 | -8.615850e-47 |
| Msa0017510 | Msa1000860 | 0.842872 | 1.982860e-58 | -8.615850e-47 |
| Msa0018650 | Msa1000860 | 0.820040 | 8.459723e-53 | -8.615850e-47 |
| Msa0031340 | Msa1000860 | 0.820330 | 7.260184e-53 | -8.615850e-47 |
| Msa0036130 | Msa1000860 | 0.814615 | 1.407423e-51 | -8.615850e-47 |
| Msa0036920 | Msa1000860 | 0.804282 | 2.328336e-49 | -8.615850e-47 |
| Msa0042920 | Msa1000860 | 0.800992 | 1.111174e-48 | -8.615850e-47 |
| Msa0046100 | Msa1000860 | 0.819868 | 9.262428e-53 | -8.615850e-47 |
| Msa0050390 | Msa1000860 | 0.804421 | 2.177620e-49 | -8.615850e-47 |
| Msa0052680 | Msa1000860 | 0.811404 | 7.119640e-51 | -8.615850e-47 |
| Msa0052730 | Msa1000860 | 0.834425 | 3.020308e-56 | -8.615850e-47 |
| Msa0079400 | Msa1000860 | 0.804905 | 1.725914e-49 | -8.615850e-47 |
| Msa0105070 | Msa1000860 | 0.820988 | 5.125697e-53 | -8.615850e-47 |
| Msa0107640 | Msa1000860 | 0.812545 | 4.017455e-51 | -8.615850e-47 |
| Msa0112590 | Msa1000860 | 0.805273 | 1.445826e-49 | -8.615850e-47 |
| Msa0112770 | Msa1000860 | 0.806255 | 8.987795e-50 | -8.615850e-47 |
| Msa0114060 | Msa1000860 | 0.809650 | 1.704023e-50 | -8.615850e-47 |
| Msa0115270 | Msa1000860 | 0.805141 | 1.540493e-49 | -8.615850e-47 |
| Msa0120300 | Msa1000860 | 0.821330 | 4.276923e-53 | -8.615850e-47 |
| Msa0616160 | Msa1000860 | 0.811568 | 6.559062e-51 | -8.615850e-47 |
| Msa0626090 | Msa1000860 | 0.801733 | 7.832610e-49 | -8.615850e-47 |
| Msa0650630 | Msa1000860 | 0.822169 | 2.734769e-53 | -8.615850e-47 |
| Msa0656530 | Msa1000860 | 0.820870 | 5.458545e-53 | -8.615850e-47 |
| Msa0661650 | Msa1000860 | 0.807825 | 4.183845e-50 | -8.615850e-47 |
| Msa0663240 | Msa1000860 | 0.814769 | 1.301737e-51 | -8.615850e-47 |
| Msa0663380 | Msa1000860 | 0.830082 | 3.587648e-55 | -8.615850e-47 |
| Msa0672690 | Msa1000860 | 0.836909 | 7.098587e-57 | -8.615850e-47 |
| Msa0675690 | Msa1000860 | 0.801894 | 7.258642e-49 | -8.615850e-47 |
| Msa0679710 | Msa1000860 | 0.824281 | 8.789160e-54 | -8.615850e-47 |
| Msa0681270 | Msa1000860 | 0.816338 | 5.823844e-52 | -8.615850e-47 |
| Msa0688480 | Msa1000860 | 0.824140 | 9.482565e-54 | -8.615850e-47 |
| Msa0701010 | Msa1000860 | 0.863800 | 1.922451e-64 | -8.615850e-47 |
| Msa0703050 | Msa1000860 | 0.801916 | 7.183725e-49 | -8.615850e-47 |
| Msa0724210 | Msa1000860 | 0.800751 | 1.244381e-48 | -8.615850e-47 |
| Msa0731940 | Msa1000860 | 0.812396 | 4.330432e-51 | -8.615850e-47 |
| Msa0735170 | Msa1000860 | 0.811009 | 8.672124e-51 | -8.615850e-47 |
| Msa0735660 | Msa1000860 | 0.805454 | 1.324821e-49 | -8.615850e-47 |
| Msa0747100 | Msa1000860 | 0.811058 | 8.463990e-51 | -8.615850e-47 |
| Msa0753720 | Msa1000860 | 0.810302 | 1.233100e-50 | -8.615850e-47 |
| Msa0756460 | Msa1000860 | 0.824296 | 8.718548e-54 | -8.615850e-47 |
| Msa0760130 | Msa1000860 | 0.854665 | 1.058387e-61 | -8.615850e-47 |
| Msa0762210 | Msa1000860 | 0.819314 | 1.239773e-52 | -8.615850e-47 |
| Msa0766630 | Msa1000860 | 0.811553 | 6.611129e-51 | -8.615850e-47 |
| Msa0767750 | Msa1000860 | 0.815043 | 1.131548e-51 | -8.615850e-47 |
| Msa0767810 | Msa1000860 | 0.806692 | 7.270008e-50 | -8.615850e-47 |
| Msa0768290 | Msa1000860 | 0.867294 | 1.521135e-65 | -8.615850e-47 |
| Msa0768370 | Msa1000860 | 0.834006 | 3.845138e-56 | -8.615850e-47 |
| Msa0773180 | Msa1000860 | 0.818256 | 2.155378e-52 | -8.615850e-47 |
| Msa0776990 | Msa1000860 | 0.843859 | 1.080967e-58 | -8.615850e-47 |
| Msa0777230 | Msa1000860 | 0.843371 | 1.460313e-58 | -8.615850e-47 |
| Msa0791880 | Msa1000860 | 0.802291 | 6.014611e-49 | -8.615850e-47 |
| Msa0794510 | Msa1000860 | -0.811124 | 8.190461e-51 | -8.615850e-47 |
| Msa0796700 | Msa1000860 | 0.808527 | 2.964308e-50 | -8.615850e-47 |
| Msa0810220 | Msa1000860 | 0.815542 | 8.762647e-52 | -8.615850e-47 |
| Msa0816710 | Msa1000860 | 0.816526 | 5.286015e-52 | -8.615850e-47 |
| Msa0820850 | Msa1000860 | 0.837715 | 4.413296e-57 | -8.615850e-47 |
| Msa0824660 | Msa1000860 | 0.809244 | 2.082946e-50 | -8.615850e-47 |
| Msa0828540 | Msa1000860 | 0.801514 | 8.688061e-49 | -8.615850e-47 |
| Msa0832340 | Msa1000860 | 0.822458 | 2.344069e-53 | -8.615850e-47 |
| Msa0130970 | Msa1000860 | 0.800469 | 1.420353e-48 | -8.615850e-47 |
| Msa0131770 | Msa1000860 | 0.817367 | 3.420358e-52 | -8.615850e-47 |
| Msa0150840 | Msa1000860 | 0.804687 | 1.916630e-49 | -8.615850e-47 |
| Msa0157290 | Msa1000860 | 0.842315 | 2.788192e-58 | -8.615850e-47 |
| Msa0165210 | Msa1000860 | 0.803015 | 4.264817e-49 | -8.615850e-47 |
| Msa0178930 | Msa1000860 | 0.813649 | 2.300162e-51 | -8.615850e-47 |
| Msa0178960 | Msa1000860 | 0.805599 | 1.235243e-49 | -8.615850e-47 |
| Msa0178970 | Msa1000860 | 0.804868 | 1.756889e-49 | -8.615850e-47 |
| Msa0180500 | Msa1000860 | 0.824648 | 7.203202e-54 | -8.615850e-47 |
| Msa0182680 | Msa1000860 | 0.816472 | 5.434173e-52 | -8.615850e-47 |
| Msa0198910 | Msa1000860 | 0.809152 | 2.179481e-50 | -8.615850e-47 |
| Msa0215320 | Msa1000860 | -0.831248 | 1.858862e-55 | -8.615850e-47 |
| Msa0220580 | Msa1000860 | 0.823754 | 1.168129e-53 | -8.615850e-47 |
| Msa0220740 | Msa1000860 | 0.836125 | 1.123888e-56 | -8.615850e-47 |
| Msa0223410 | Msa1000860 | -0.825623 | 4.238530e-54 | -8.615850e-47 |
| Msa0223690 | Msa1000860 | 0.810534 | 1.098945e-50 | -8.615850e-47 |
| Msa0225320 | Msa1000860 | 0.800220 | 1.596447e-48 | -8.615850e-47 |
| Msa0226890 | Msa1000860 | 0.810453 | 1.143953e-50 | -8.615850e-47 |
| Msa0233300 | Msa1000860 | 0.813472 | 2.515997e-51 | -8.615850e-47 |
| Msa0367870 | Msa1000860 | 0.802097 | 6.593202e-49 | -8.615850e-47 |
| Msa0385840 | Msa1000860 | 0.803490 | 3.399977e-49 | -8.615850e-47 |
| Msa0388960 | Msa1000860 | 0.806321 | 8.707218e-50 | -8.615850e-47 |
| Msa0391430 | Msa1000860 | 0.823644 | 1.239551e-53 | -8.615850e-47 |
| Msa0395790 | Msa1000860 | 0.822461 | 2.339763e-53 | -8.615850e-47 |
| Msa0402290 | Msa1000860 | 0.819961 | 8.822463e-53 | -8.615850e-47 |
| Msa0405370 | Msa1000860 | 0.810956 | 8.907749e-51 | -8.615850e-47 |
| Msa0405880 | Msa1000860 | 0.808555 | 2.923953e-50 | -8.615850e-47 |
| Msa0417270 | Msa1000860 | 0.834248 | 3.345421e-56 | -8.615850e-47 |
| Msa0424320 | Msa1000860 | 0.872370 | 3.350542e-67 | -8.615850e-47 |
| Msa0425790 | Msa1000860 | 0.817854 | 2.657564e-52 | -8.615850e-47 |
| Msa0440750 | Msa1000860 | 0.812100 | 5.023279e-51 | -8.615850e-47 |
| Msa0443260 | Msa1000860 | 0.823442 | 1.381818e-53 | -8.615850e-47 |
| Msa0444750 | Msa1000860 | -0.813415 | 2.589509e-51 | -8.615850e-47 |
| Msa0464260 | Msa1000860 | 0.805901 | 1.067174e-49 | -8.615850e-47 |
| Msa0464680 | Msa1000860 | 0.815871 | 7.401615e-52 | -8.615850e-47 |
| Msa0466390 | Msa1000860 | 0.800678 | 1.287830e-48 | -8.615850e-47 |
| Msa0480980 | Msa1000860 | 0.812277 | 4.596857e-51 | -8.615850e-47 |
| Msa0991640 | Msa1000860 | 0.821293 | 4.361979e-53 | -8.615850e-47 |
| Msa0991830 | Msa1000860 | 0.801796 | 7.602776e-49 | -8.615850e-47 |
| Msa0993290 | Msa1000860 | 0.817580 | 3.062710e-52 | -8.615850e-47 |
| Msa0993600 | Msa1000860 | 0.821397 | 4.125750e-53 | -8.615850e-47 |
| Msa0998690 | Msa1000860 | 0.828138 | 1.061727e-54 | -8.615850e-47 |
| Msa1000180 | Msa1000860 | 0.802387 | 5.747591e-49 | -8.615850e-47 |
| Msa1000860 | Msa1000870 | 0.804545 | 2.052371e-49 | -8.615850e-47 |
| Msa1000860 | Msa1000880 | 0.879285 | 1.411291e-69 | -8.615850e-47 |
| Msa1000860 | Msa1000890 | 0.934337 | 4.721629e-96 | -8.615850e-47 |
| Msa1000860 | Msa1000900 | 0.950955 | 5.633262e-109 | -8.615850e-47 |
| Msa1000860 | Msa1000930 | 0.824957 | 6.091701e-54 | -8.615850e-47 |
| Msa1000860 | Msa1000940 | 0.828757 | 7.526897e-55 | -8.615850e-47 |
| Msa1000860 | Msa1000950 | 0.869435 | 3.104088e-66 | -8.615850e-47 |
| Msa1000860 | Msa1003620 | 0.808081 | 3.689595e-50 | -8.615850e-47 |
| Msa1000860 | Msa1014540 | 0.861890 | 7.462839e-64 | -8.615850e-47 |
| Msa1000860 | Msa1016320 | 0.805925 | 1.055032e-49 | -8.615850e-47 |
| Msa1000860 | Msa1030970 | 0.838117 | 3.478738e-57 | -8.615850e-47 |
| Msa1000860 | Msa1034300 | 0.803057 | 4.179563e-49 | -8.615850e-47 |
| Msa1000860 | Msa1043390 | 0.806586 | 7.656401e-50 | -8.615850e-47 |
| Msa1000860 | Msa1043450 | 0.810195 | 1.300501e-50 | -8.615850e-47 |
| Msa1000860 | Msa1045200 | 0.808998 | 2.351185e-50 | -8.615850e-47 |
| Msa1000860 | Msa1054990 | 0.800407 | 1.462489e-48 | -8.615850e-47 |
| Msa1000860 | Msa1070010 | 0.811747 | 5.996419e-51 | -8.615850e-47 |
| Msa1000860 | Msa1075220 | -0.832049 | 1.179982e-55 | -8.615850e-47 |
| Msa1000860 | Msa1075540 | 0.823575 | 1.286511e-53 | -8.615850e-47 |
| Msa1000860 | Msa1075650 | 0.825525 | 4.470257e-54 | -8.615850e-47 |
| Msa1000860 | Msa1082500 | 0.823466 | 1.364674e-53 | -8.615850e-47 |
| Msa1000860 | Msa1090260 | 0.824204 | 9.160271e-54 | -8.615850e-47 |
| Msa1000860 | Msa1098250 | 0.800679 | 1.287319e-48 | -8.615850e-47 |
| Msa1000860 | Msa1113170 | 0.817975 | 2.495437e-52 | -8.615850e-47 |
| Msa1000860 | Msa1115100 | 0.804693 | 1.911231e-49 | -8.615850e-47 |
| Msa1000860 | Msa1116130 | -0.805931 | 1.051998e-49 | -8.615850e-47 |
| Msa1000860 | Msa1117170 | 0.813526 | 2.447889e-51 | -8.615850e-47 |
| Msa1000860 | Msa1121480 | 0.813988 | 1.936575e-51 | -8.615850e-47 |
| Msa1000860 | Msa1121490 | 0.827840 | 1.252960e-54 | -8.615850e-47 |
| Msa1000860 | Msa1137570 | 0.842074 | 3.228206e-58 | -8.615850e-47 |
| Msa1000860 | Msa1139000 | -0.803673 | 3.115385e-49 | -8.615850e-47 |
| Msa1000860 | Msa1150210 | 0.800050 | 1.728376e-48 | -8.615850e-47 |
| Msa1000860 | Msa1154280 | 0.801599 | 8.347023e-49 | -8.615850e-47 |
| Msa1000860 | Msa1156020 | 0.812375 | 4.376182e-51 | -8.615850e-47 |
| Msa1000860 | Msa1158310 | 0.803661 | 3.134246e-49 | -8.615850e-47 |
| Msa1000860 | Msa1162550 | -0.837394 | 5.335062e-57 | -8.615850e-47 |
| Msa1000860 | Msa1165540 | 0.824613 | 7.340881e-54 | -8.615850e-47 |
| Msa1000860 | Msa1173100 | 0.834659 | 2.636908e-56 | -8.615850e-47 |
| Msa1000860 | Msa1178180 | 0.801744 | 7.792593e-49 | -8.615850e-47 |
| Msa1000860 | Msa1184420 | 0.821618 | 3.668231e-53 | -8.615850e-47 |
| Msa1000860 | Msa1188990 | 0.802156 | 6.411352e-49 | -8.615850e-47 |
| Msa1000860 | Msa1227730 | 0.858361 | 8.685445e-63 | -8.615850e-47 |
| Msa1000860 | Msa1228590 | 0.802545 | 5.332812e-49 | -8.615850e-47 |
| Msa1000860 | Msa1233890 | 0.838641 | 2.548139e-57 | -8.615850e-47 |
| Msa1000860 | Msa1236100 | 0.801262 | 9.784501e-49 | -8.615850e-47 |
| Msa1000860 | Msa1238930 | 0.837632 | 4.634729e-57 | -8.615850e-47 |
| Msa1000860 | Msa1239530 | 0.820433 | 6.875927e-53 | -8.615850e-47 |
| Msa1000860 | Msa1239720 | 0.801877 | 7.318478e-49 | -8.615850e-47 |
| Msa1000860 | Msa1242670 | 0.808708 | 2.712076e-50 | -8.615850e-47 |
| Msa1000860 | Msa1244250 | 0.806621 | 7.526763e-50 | -8.615850e-47 |
| Msa1000860 | Msa1247250 | 0.812163 | 4.867124e-51 | -8.615850e-47 |
| Msa1000860 | Msa1252140 | 0.814625 | 1.400389e-51 | -8.615850e-47 |
| Msa1000860 | Msa1253020 | 0.814635 | 1.393313e-51 | -8.615850e-47 |
| Msa1000860 | Msa1273920 | 0.813429 | 2.571456e-51 | -8.615850e-47 |
| Msa1000860 | Msa1277660 | 0.812634 | 3.841623e-51 | -8.615850e-47 |
| Msa1000860 | Msa1281510 | 0.812261 | 4.633256e-51 | -8.615850e-47 |
| Msa1000860 | Msa1282580 | -0.803023 | 4.248345e-49 | -8.615850e-47 |
| Msa1000860 | Msa1283860 | 0.811820 | 5.781919e-51 | -8.615850e-47 |
| Msa1000860 | Msa1284680 | 0.867883 | 9.849858e-66 | -8.615850e-47 |
| Msa1000860 | Msa1286800 | 0.828406 | 9.151200e-55 | -8.615850e-47 |
| Msa1000860 | Msa1287190 | 0.821082 | 4.878670e-53 | -8.615850e-47 |
| Msa1000860 | Msa1287220 | 0.812622 | 3.865358e-51 | -8.615850e-47 |
| Msa1000860 | Msa1291660 | 0.821138 | 4.735202e-53 | -8.615850e-47 |
| Msa1000860 | Msa1292760 | 0.824407 | 8.208537e-54 | -8.615850e-47 |
| Msa1000860 | Msa1296280 | 0.804995 | 1.652995e-49 | -8.615850e-47 |
| Msa1000860 | Msa1296940 | 0.814879 | 1.230429e-51 | -8.615850e-47 |
| Msa1000860 | Msa1306760 | 0.813838 | 2.089586e-51 | -8.615850e-47 |
| Msa1000860 | Msa1306850 | 0.810505 | 1.114782e-50 | -8.615850e-47 |
| Msa1000860 | Msa1306860 | 0.800849 | 1.188303e-48 | -8.615850e-47 |
| Msa1000860 | Msa1312600 | 0.802897 | 4.510156e-49 | -8.615850e-47 |
| Msa1000860 | Msa1322890 | 0.813185 | 2.908743e-51 | -8.615850e-47 |
| Msa1000860 | Msa1324500 | 0.824757 | 6.789765e-54 | -8.615850e-47 |
| Msa1000860 | Msa1353470 | 0.813340 | 2.689487e-51 | -8.615850e-47 |
| Msa1000860 | Msa1359040 | 0.830688 | 2.550573e-55 | -8.615850e-47 |
| Msa1000860 | Msa1360060 | 0.801462 | 8.901723e-49 | -8.615850e-47 |
| Msa1000860 | Msa1364830 | 0.801576 | 8.436186e-49 | -8.615850e-47 |
| Msa1000860 | Msa1366810 | 0.846613 | 1.945499e-59 | -8.615850e-47 |
| Msa1000860 | Msa1366970 | 0.840750 | 7.205515e-58 | -8.615850e-47 |
| Msa1000860 | Msa1367080 | 0.801820 | 7.519092e-49 | -8.615850e-47 |
| Msa1000860 | Msa1372760 | 0.835112 | 2.027941e-56 | -8.615850e-47 |
| Msa1000860 | Msa1390120 | 0.812644 | 3.821225e-51 | -8.615850e-47 |
| Msa1000860 | Msa1392260 | 0.801824 | 7.503642e-49 | -8.615850e-47 |
| Msa1000860 | Msa1395530 | 0.808094 | 3.666298e-50 | -8.615850e-47 |
| Msa1000860 | Msa1403480 | 0.804516 | 2.080651e-49 | -8.615850e-47 |
| Msa1000860 | Msa1409880 | 0.818265 | 2.144662e-52 | -8.615850e-47 |
| Msa1000860 | Msa1411020 | 0.807055 | 6.092518e-50 | -8.615850e-47 |
| Msa1000860 | Msa1423390 | 0.802571 | 5.268140e-49 | -8.615850e-47 |
| Msa1000860 | Msa1423880 | 0.807761 | 4.316120e-50 | -8.615850e-47 |
| Msa1000860 | Msa1427230 | 0.809625 | 1.725298e-50 | -8.615850e-47 |
| Msa1000860 | Msa1434350 | 0.801106 | 1.052967e-48 | -8.615850e-47 |
| Msa1000860 | Msa1439320 | 0.805844 | 1.097089e-49 | -8.615850e-47 |
| Msa1000860 | Msa1440370 | 0.801416 | 9.097289e-49 | -8.615850e-47 |
| Msa1000860 | Msa1440810 | 0.805076 | 1.589722e-49 | -8.615850e-47 |
| Msa1000860 | Msa1445610 | -0.800163 | 1.639572e-48 | -8.615850e-47 |
| Msa1000860 | Msa1448640 | 0.830002 | 3.753495e-55 | -8.615850e-47 |
| Msa1000860 | Msa1451620 | -0.809665 | 1.691502e-50 | -8.615850e-47 |
| Msa1000860 | Msa1453560 | 0.809621 | 1.728181e-50 | -8.615850e-47 |
| Msa1000860 | Msa1455710 | 0.824909 | 6.251390e-54 | -8.615850e-47 |
| Msa1000860 | Msa1455720 | 0.836976 | 6.822715e-57 | -8.615850e-47 |
| Msa1000860 | Msa1458750 | 0.803691 | 3.089514e-49 | -8.615850e-47 |
| Msa1000860 | Msa1466540 | 0.803074 | 4.146066e-49 | -8.615850e-47 |
| Msa0243460 | Msa1000860 | 0.853578 | 2.177820e-61 | -8.615850e-47 |
| Msa0249560 | Msa1000860 | 0.808654 | 2.784428e-50 | -8.615850e-47 |
| Msa0251640 | Msa1000860 | 0.824451 | 8.015710e-54 | -8.615850e-47 |
| Msa0259370 | Msa1000860 | 0.813212 | 2.870050e-51 | -8.615850e-47 |
| Msa0278110 | Msa1000860 | 0.830628 | 2.637910e-55 | -8.615850e-47 |
| Msa0278190 | Msa1000860 | 0.822049 | 2.916524e-53 | -8.615850e-47 |
| Msa0285450 | Msa1000860 | 0.806870 | 6.668981e-50 | -8.615850e-47 |
| Msa0288100 | Msa1000860 | 0.847216 | 1.330309e-59 | -8.615850e-47 |
| Msa0292050 | Msa1000860 | 0.808034 | 3.776774e-50 | -8.615850e-47 |
| Msa0296230 | Msa1000860 | 0.800666 | 1.294681e-48 | -8.615850e-47 |
| Msa0296710 | Msa1000860 | 0.814574 | 1.437428e-51 | -8.615850e-47 |
| Msa0298460 | Msa1000860 | 0.808773 | 2.626283e-50 | -8.615850e-47 |
| Msa0302580 | Msa1000860 | -0.812014 | 5.245944e-51 | -8.615850e-47 |
| Msa0305190 | Msa1000860 | 0.806860 | 6.699643e-50 | -8.615850e-47 |
| Msa0321310 | Msa1000860 | 0.815130 | 1.082552e-51 | -8.615850e-47 |
| Msa0333030 | Msa1000860 | 0.800738 | 1.251927e-48 | -8.615850e-47 |
| Msa0345970 | Msa1000860 | 0.819746 | 9.876248e-53 | -8.615850e-47 |
| Msa0355220 | Msa1000860 | 0.816909 | 4.336680e-52 | -8.615850e-47 |
| Msa0357340 | Msa1000860 | 0.800278 | 1.553567e-48 | -8.615850e-47 |
| Msa0359030 | Msa1000860 | 0.842006 | 3.365506e-58 | -8.615850e-47 |
| Msa0484780 | Msa1000860 | 0.819582 | 1.076678e-52 | -8.615850e-47 |
| Msa0488560 | Msa1000860 | 0.806543 | 7.817360e-50 | -8.615850e-47 |
| Msa0502340 | Msa1000860 | 0.807560 | 4.762283e-50 | -8.615850e-47 |
| Msa0502890 | Msa1000860 | 0.817453 | 3.271532e-52 | -8.615850e-47 |
| Msa0512900 | Msa1000860 | 0.838724 | 2.425856e-57 | -8.615850e-47 |
| Msa0517110 | Msa1000860 | 0.810969 | 8.847294e-51 | -8.615850e-47 |
| Msa0519000 | Msa1000860 | 0.826972 | 2.022291e-54 | -8.615850e-47 |
| Msa0523940 | Msa1000860 | 0.869968 | 2.079142e-66 | -8.615850e-47 |
| Msa0529040 | Msa1000860 | 0.833695 | 4.600002e-56 | -8.615850e-47 |
| Msa0539530 | Msa1000860 | -0.806062 | 9.871249e-50 | -8.615850e-47 |
| Msa0545700 | Msa1000860 | 0.822061 | 2.897953e-53 | -8.615850e-47 |
| Msa0547320 | Msa1000860 | 0.807741 | 4.359255e-50 | -8.615850e-47 |
| Msa0562440 | Msa1000860 | 0.834360 | 3.134646e-56 | -8.615850e-47 |
| Msa0563840 | Msa1000860 | 0.806185 | 9.301675e-50 | -8.615850e-47 |
| Msa0581050 | Msa1000860 | 0.801777 | 7.671617e-49 | -8.615850e-47 |
| Msa0585230 | Msa1000860 | 0.837962 | 3.814641e-57 | -8.615850e-47 |
| Msa0844240 | Msa1000860 | 0.821965 | 3.050275e-53 | -8.615850e-47 |
| Msa0844410 | Msa1000860 | 0.801401 | 9.162354e-49 | -8.615850e-47 |
| Msa0844420 | Msa1000860 | 0.803120 | 4.057101e-49 | -8.615850e-47 |
| Msa0844470 | Msa1000860 | 0.821297 | 4.352115e-53 | -8.615850e-47 |
| Msa0844490 | Msa1000860 | 0.844290 | 8.284960e-59 | -8.615850e-47 |
| Msa0849030 | Msa1000860 | 0.803449 | 3.467341e-49 | -8.615850e-47 |
| Msa0857640 | Msa1000860 | 0.817584 | 3.056384e-52 | -8.615850e-47 |
| Msa0861130 | Msa1000860 | 0.836873 | 7.251111e-57 | -8.615850e-47 |
| Msa0877250 | Msa1000860 | 0.827986 | 1.155156e-54 | -8.615850e-47 |
| Msa0880140 | Msa1000860 | 0.842568 | 2.388183e-58 | -8.615850e-47 |
| Msa0892080 | Msa1000860 | 0.826339 | 2.863395e-54 | -8.615850e-47 |
| Msa0897330 | Msa1000860 | 0.820336 | 7.239232e-53 | -8.615850e-47 |
| Msa0898670 | Msa1000860 | 0.826129 | 3.214214e-54 | -8.615850e-47 |
| Msa0899430 | Msa1000860 | 0.806083 | 9.769961e-50 | -8.615850e-47 |
| Msa0899450 | Msa1000860 | 0.834303 | 3.240770e-56 | -8.615850e-47 |
| Msa0900230 | Msa1000860 | 0.819181 | 1.329244e-52 | -8.615850e-47 |
| Msa0925290 | Msa1000860 | 0.801422 | 9.074063e-49 | -8.615850e-47 |
| Msa0926890 | Msa1000860 | 0.814474 | 1.512528e-51 | -8.615850e-47 |
| Msa0927380 | Msa1000860 | 0.843424 | 1.413641e-58 | -8.615850e-47 |
| Msa0931520 | Msa1000860 | 0.820982 | 5.143102e-53 | -8.615850e-47 |
| Msa0933100 | Msa1000860 | 0.807455 | 5.013131e-50 | -8.615850e-47 |
| Msa0936300 | Msa1000860 | 0.841015 | 6.137460e-58 | -8.615850e-47 |
| Msa0942200 | Msa1000860 | 0.834899 | 2.295094e-56 | -8.615850e-47 |
| Msa0953120 | Msa1000860 | 0.836380 | 9.680644e-57 | -8.615850e-47 |
| Msa0954130 | Msa1000860 | 0.819846 | 9.373540e-53 | -8.615850e-47 |
| Msa0954550 | Msa1000860 | 0.809654 | 1.700749e-50 | -8.615850e-47 |
| Msa0963270 | Msa1000860 | 0.800965 | 1.125366e-48 | -8.615850e-47 |
| Msa0964900 | Msa1000860 | 0.820661 | 6.095296e-53 | -8.615850e-47 |
| Msa0966750 | Msa1000860 | 0.802456 | 5.562725e-49 | -8.615850e-47 |
| Msa0969520 | Msa1000860 | 0.858472 | 8.049215e-63 | -8.615850e-47 |
| Msa0973100 | Msa1000860 | 0.831417 | 1.689690e-55 | -8.615850e-47 |
| Msa0974070 | Msa1000860 | 0.810904 | 9.140358e-51 | -8.615850e-47 |
| Msa0974080 | Msa1000860 | 0.820647 | 6.142571e-53 | -8.615850e-47 |
| Msa0976670 | Msa1000860 | 0.835618 | 1.510803e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1000860 | MtrunA17_Chr6g0487501 | 41.481 | 135 | 69 | 3 | 111 | 236 | 23 | 156 | 1.16e-24 | 96.7 |
| Msa1000860 | MtrunA17_Chr3g0092521 | 36.478 | 159 | 92 | 4 | 90 | 245 | 67 | 219 | 7.51e-23 | 94.4 |
| Msa1000860 | MtrunA17_Chr4g0060621 | 35.220 | 159 | 94 | 4 | 90 | 245 | 64 | 216 | 2.29e-21 | 90.5 |
| Msa1000860 | MtrunA17_Chr6g0487861 | 46.575 | 73 | 39 | 0 | 90 | 162 | 9 | 81 | 1.74e-14 | 67.4 |
| Msa1000860 | MtrunA17_Chr6g0487691 | 46.575 | 73 | 39 | 0 | 90 | 162 | 9 | 81 | 1.74e-14 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1000860 | AT1G74560.1 | 38.415 | 164 | 92 | 4 | 90 | 249 | 69 | 227 | 1.61e-26 | 104 |
| Msa1000860 | AT1G74560.3 | 36.413 | 184 | 108 | 4 | 90 | 269 | 69 | 247 | 2.49e-24 | 99.0 |
| Msa1000860 | AT1G18800.1 | 35.220 | 159 | 96 | 4 | 90 | 245 | 65 | 219 | 8.08e-21 | 89.4 |
Find 83 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAGGTCAGGAATTGATTT+TGG | 0.153912 | 6_4:+84194609 | Msa1000860:intron |
| ATGTTACCTTATTGTATTTC+CGG | 0.193543 | 6_4:-84194833 | None:intergenic |
| ATTCTGGTCTAAGGCGTTTA+AGG | 0.206554 | 6_4:+84196021 | Msa1000860:CDS |
| TTCAAGCTGATTACACTAAA+AGG | 0.238160 | 6_4:+84192256 | Msa1000860:five_prime_UTR |
| TCCTCCTCGTCGTTCTCTTC+AGG | 0.243641 | 6_4:-84196289 | None:intergenic |
| TTTCGCGCTTACCTGGATTC+TGG | 0.333322 | 6_4:+84196005 | Msa1000860:CDS |
| GTTTCTTCTAATTAGGTCAT+TGG | 0.346611 | 6_4:+84192213 | Msa1000860:intron |
| ACGCTTTGAAATGCGTTTGT+TGG | 0.354540 | 6_4:-84196188 | None:intergenic |
| CGATTGGAGGCGGCGGCGAT+GGG | 0.357308 | 6_4:-84192036 | None:intergenic |
| TACAATGCAGATTCAAAATC+AGG | 0.364481 | 6_4:+84196124 | Msa1000860:CDS |
| TTCAGTGAATTCAAATATGA+TGG | 0.374695 | 6_4:-84196152 | None:intergenic |
| ACTCTTCCCTCTTCGGTGTT+CGG | 0.377800 | 6_4:-84194744 | None:intergenic |
| GCGATTGGAGGCGGCGGCGA+TGG | 0.380511 | 6_4:-84192037 | None:intergenic |
| CTTACCTGGATTCTGGTCTA+AGG | 0.383515 | 6_4:+84196012 | Msa1000860:CDS |
| TTAGGTCATTGGAAACTAAT+CGG | 0.390063 | 6_4:+84192224 | Msa1000860:intron |
| TTCTCTTCAGGAACAATGTT+GGG | 0.394116 | 6_4:-84196277 | None:intergenic |
| TTTCCTTTGTCATCGACCTT+AGG | 0.401403 | 6_4:-84194696 | None:intergenic |
| AAACCGCCGGAAATACAATA+AGG | 0.413358 | 6_4:+84194827 | Msa1000860:CDS |
| TGTCATCAGAATCACCTTGT+AGG | 0.416806 | 6_4:-84196453 | None:intergenic |
| TTCGGTGTTCGGATGTAAAT+CGG | 0.417505 | 6_4:-84194733 | None:intergenic |
| GAACAAATTTCGCGCTTACC+TGG | 0.430789 | 6_4:+84195998 | Msa1000860:CDS |
| CTCTTCTGCTCTCTTCTCCT+CGG | 0.460846 | 6_4:+84192106 | Msa1000860:five_prime_UTR |
| AGGCTATTCCAATCCTTGGT+AGG | 0.466357 | 6_4:+84196041 | Msa1000860:CDS |
| CAGAGGCGAACGGCGGTGAC+GGG | 0.474308 | 6_4:-84192067 | None:intergenic |
| CCGGATTGGAAAAGTTATAG+TGG | 0.477308 | 6_4:+84196402 | Msa1000860:CDS |
| GTGACGGGGACGACGGCGAT+TGG | 0.477500 | 6_4:-84192052 | None:intergenic |
| TTTAAGGCTATTCCAATCCT+TGG | 0.489030 | 6_4:+84196037 | Msa1000860:CDS |
| ACAGAGGCGAACGGCGGTGA+CGG | 0.490526 | 6_4:-84192068 | None:intergenic |
| AAGTTATAGTGGAGAAGTTG+TGG | 0.492368 | 6_4:+84196413 | Msa1000860:CDS |
| ACGGGGACGACGGCGATTGG+AGG | 0.494448 | 6_4:-84192049 | None:intergenic |
| AGATTAATCGATAAAATAAG+AGG | 0.494706 | 6_4:-84196583 | None:intergenic |
| GGGACGACGGCGATTGGAGG+CGG | 0.497186 | 6_4:-84192046 | None:intergenic |
| TTTAACTCCCTACCAAGGAT+TGG | 0.500203 | 6_4:-84196049 | None:intergenic |
| CACAGATTCTGAAGATGAAG+TGG | 0.506725 | 6_4:+84196474 | Msa1000860:CDS |
| AGTTATAGTGGAGAAGTTGT+GGG | 0.507373 | 6_4:+84196414 | Msa1000860:CDS |
| CTACTTCAATAGAATTGAGA+TGG | 0.510628 | 6_4:-84196099 | None:intergenic |
| AACGCCTTAGACCAGAATCC+AGG | 0.516928 | 6_4:-84196016 | None:intergenic |
| CCTTTGTCATCGACCTTAGG+AGG | 0.518162 | 6_4:-84194693 | None:intergenic |
| CTTCTTCAATCGTCTCCTCT+CGG | 0.519102 | 6_4:-84195919 | None:intergenic |
| CAGAATCACCTTGTAGGTGA+TGG | 0.519969 | 6_4:-84196447 | None:intergenic |
| GGCTATTCCAATCCTTGGTA+GGG | 0.522682 | 6_4:+84196042 | Msa1000860:CDS |
| TTCAAGAACGGAGACCGGAT+TGG | 0.527075 | 6_4:+84196388 | Msa1000860:CDS |
| AAGACTTCAAGAACGGAGAC+CGG | 0.532266 | 6_4:+84196383 | Msa1000860:CDS |
| ACTTAGCCTTCAGCCTCCTA+AGG | 0.538381 | 6_4:+84194680 | Msa1000860:CDS |
| ACGACGGCGATTGGAGGCGG+CGG | 0.538595 | 6_4:-84192043 | None:intergenic |
| GTTCTCTTCAGGAACAATGT+TGG | 0.541834 | 6_4:-84196278 | None:intergenic |
| AACGGCGGTGACGGGGACGA+CGG | 0.549872 | 6_4:-84192059 | None:intergenic |
| GAGGAGACGATTGAAGAAGA+AGG | 0.549967 | 6_4:+84195923 | Msa1000860:CDS |
| TTGTATCTACAAGTATAGAC+TGG | 0.551695 | 6_4:+84196242 | Msa1000860:CDS |
| TGGAAGTTTCTGAAGAGGGA+AGG | 0.556806 | 6_4:+84194781 | Msa1000860:CDS |
| GATCCTCTCCATCACCTACA+AGG | 0.557157 | 6_4:+84196439 | Msa1000860:CDS |
| TTACATCCGAACACCGAAGA+GGG | 0.565718 | 6_4:+84194738 | Msa1000860:CDS |
| GAAGTCTTCTTTATCACTTG+AGG | 0.570931 | 6_4:-84196368 | None:intergenic |
| GAGATGAACGGCGGTGACAG+AGG | 0.575225 | 6_4:-84192084 | None:intergenic |
| GATTGGAGGCGGCGGCGATG+GGG | 0.579670 | 6_4:-84192035 | None:intergenic |
| AGAGGCGAACGGCGGTGACG+GGG | 0.581455 | 6_4:-84192066 | None:intergenic |
| GAGAGCAGAAGAGAGATGAA+CGG | 0.587035 | 6_4:-84192096 | None:intergenic |
| GAAACAAAAGAGGAGGATGA+AGG | 0.589583 | 6_4:+84196524 | Msa1000860:CDS |
| CAAGCATTGTGTTAAGCGCA+AGG | 0.591428 | 6_4:+84195976 | Msa1000860:CDS |
| GATAAAGAAGACTTCAAGAA+CGG | 0.592638 | 6_4:+84196376 | Msa1000860:CDS |
| GTGATGGAAGTTTCTGAAGA+GGG | 0.594703 | 6_4:+84194777 | Msa1000860:CDS |
| GAGGCTGAAGGCTAAGTCGA+TGG | 0.595628 | 6_4:-84194674 | None:intergenic |
| AGTGATGGAAGTTTCTGAAG+AGG | 0.596626 | 6_4:+84194776 | Msa1000860:CDS |
| AAGACGATGAGAAACAAAAG+AGG | 0.609255 | 6_4:+84196514 | Msa1000860:CDS |
| CAGCGATGATGCAAAACCGC+CGG | 0.612239 | 6_4:+84194814 | Msa1000860:CDS |
| CCTCCTAAGGTCGATGACAA+AGG | 0.616102 | 6_4:+84194693 | Msa1000860:CDS |
| CATCGACCTTAGGAGGCTGA+AGG | 0.622683 | 6_4:-84194686 | None:intergenic |
| TAAGGTCGATGACAAAGGAA+AGG | 0.624536 | 6_4:+84194698 | Msa1000860:CDS |
| CTGTGGTACGTAGTACGTGA+AGG | 0.632844 | 6_4:-84191995 | None:intergenic |
| TTACCTTATTGTATTTCCGG+CGG | 0.635673 | 6_4:-84194830 | None:intergenic |
| TCACCTTGTAGGTGATGGAG+AGG | 0.640297 | 6_4:-84196442 | None:intergenic |
| AGAAGTGAGAAGAGAGACTG+TGG | 0.640527 | 6_4:-84192012 | None:intergenic |
| TTTACATCCGAACACCGAAG+AGG | 0.645744 | 6_4:+84194737 | Msa1000860:CDS |
| TGTGGTACGTAGTACGTGAA+GGG | 0.648528 | 6_4:-84191994 | None:intergenic |
| TCCTGAAGAGAACGACGAGG+AGG | 0.650913 | 6_4:+84196288 | Msa1000860:CDS |
| ACGGCGGTGACAGAGGCGAA+CGG | 0.659057 | 6_4:-84192077 | None:intergenic |
| ACGATGAGAAACAAAAGAGG+AGG | 0.659988 | 6_4:+84196517 | Msa1000860:CDS |
| TGGCATTTAACTCCCTACCA+AGG | 0.660277 | 6_4:-84196054 | None:intergenic |
| AGCAGAAGAGAGATGAACGG+CGG | 0.669622 | 6_4:-84192093 | None:intergenic |
| GGTCGATGACAAAGGAAAGG+AGG | 0.674406 | 6_4:+84194701 | Msa1000860:CDS |
| GCGGTGACAGAGGCGAACGG+CGG | 0.705680 | 6_4:-84192074 | None:intergenic |
| AAGCGTTATAACATGCACGA+CGG | 0.763292 | 6_4:+84196205 | Msa1000860:CDS |
| TGTTCCTGAAGAGAACGACG+AGG | 0.779029 | 6_4:+84196285 | Msa1000860:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTGTTATTTAATTGATTTT+TGG | + | chr6_4:84193233-84193252 | Msa1000860:intron | 10.0% |
| !!! | GAATTTTTATTTAATAATTG+GGG | + | chr6_4:84194411-84194430 | Msa1000860:intron | 10.0% |
| !! | AATACAAAGATAAAAGAATT+GGG | - | chr6_4:84192289-84192308 | None:intergenic | 15.0% |
| !! | AAATACAAAGATAAAAGAAT+TGG | - | chr6_4:84192290-84192309 | None:intergenic | 15.0% |
| !!! | GTTGATTTTTTATTTTAATG+AGG | + | chr6_4:84192413-84192432 | Msa1000860:intron | 15.0% |
| !! | AATCAATTAAATAACAATGA+TGG | - | chr6_4:84193231-84193250 | None:intergenic | 15.0% |
| !! | TTATTATAGATAGATAGATT+TGG | + | chr6_4:84194259-84194278 | Msa1000860:intron | 15.0% |
| !! | TATTATAGATAGATAGATTT+GGG | + | chr6_4:84194260-84194279 | Msa1000860:intron | 15.0% |
| !! | CAAAATAAAATTCTAAGTAT+TGG | - | chr6_4:84194320-84194339 | None:intergenic | 15.0% |
| !! | AAAAAGCAACAAAATAAAAT+AGG | - | chr6_4:84194503-84194522 | None:intergenic | 15.0% |
| !! | TAACTTAAATAAAACTATGA+AGG | + | chr6_4:84195289-84195308 | Msa1000860:intron | 15.0% |
| !!! | AAAAAGTTAATATCTTTTGA+AGG | - | chr6_4:84195466-84195485 | None:intergenic | 15.0% |
| !! | AAAGTTGTATTATTTAACAT+GGG | - | chr6_4:84195810-84195829 | None:intergenic | 15.0% |
| !! | TAAAGTTGTATTATTTAACA+TGG | - | chr6_4:84195811-84195830 | None:intergenic | 15.0% |
| !! | ATGTTAAATAATACAACTTT+AGG | + | chr6_4:84195810-84195829 | Msa1000860:intron | 15.0% |
| !! | ATACAAAGATAAAAGAATTG+GGG | - | chr6_4:84192288-84192307 | None:intergenic | 20.0% |
| !!! | ATCTTTGTATTTCTATTTCA+AGG | + | chr6_4:84192298-84192317 | Msa1000860:intron | 20.0% |
| !!! | TCTTTGTATTTCTATTTCAA+GGG | + | chr6_4:84192299-84192318 | Msa1000860:intron | 20.0% |
| !! | GGAATATTAATTTATAAGCA+TGG | + | chr6_4:84192536-84192555 | Msa1000860:intron | 20.0% |
| !!! | CTTTTAAAAGTCTTTTAACA+AGG | - | chr6_4:84193704-84193723 | None:intergenic | 20.0% |
| !! | CTAAAAATCAGAATTCATTT+CGG | - | chr6_4:84194197-84194216 | None:intergenic | 20.0% |
| !! | ATTATAGATAGATAGATTTG+GGG | + | chr6_4:84194261-84194280 | Msa1000860:intron | 20.0% |
| !!! | TACTTAGAATTTTATTTTGC+CGG | + | chr6_4:84194321-84194340 | Msa1000860:intron | 20.0% |
| !!! | GATTTTTTAATTCATAGTTG+AGG | - | chr6_4:84194379-84194398 | None:intergenic | 20.0% |
| !!! | TAATTATGTACTTTTCTCAT+AGG | - | chr6_4:84195540-84195559 | None:intergenic | 20.0% |
| !!! | ATATTTTATATATATCGAGC+TGG | + | chr6_4:84195610-84195629 | Msa1000860:intron | 20.0% |
| !! | AGATTAATCGATAAAATAAG+AGG | - | chr6_4:84196586-84196605 | None:intergenic | 20.0% |
| !! | TCGATTTGTTTCTTCTAATT+AGG | + | chr6_4:84192206-84192225 | Msa1000860:intron | 25.0% |
| !!! | GTTTATTGTTTTGTTCAGAA+GGG | + | chr6_4:84192347-84192366 | Msa1000860:intron | 25.0% |
| !!! | GATTGGTTCTTTTGTTTTTT+TGG | + | chr6_4:84192385-84192404 | Msa1000860:intron | 25.0% |
| !!! | TGATTCATTTTTCTGTCAAA+AGG | + | chr6_4:84192446-84192465 | Msa1000860:intron | 25.0% |
| !!! | GATTCATTTTTCTGTCAAAA+GGG | + | chr6_4:84192447-84192466 | Msa1000860:intron | 25.0% |
| !!! | TTTGGTCTTTTAATTCCTTT+TGG | + | chr6_4:84192500-84192519 | Msa1000860:intron | 25.0% |
| ! | AATAATGTGAGAAACTTGAT+TGG | + | chr6_4:84192615-84192634 | Msa1000860:intron | 25.0% |
| !! | TTATTCGATTATGTCTCTTT+TGG | + | chr6_4:84192735-84192754 | Msa1000860:intron | 25.0% |
| !!! | ATGAAAGTTGATATGTTCAA+TGG | - | chr6_4:84193059-84193078 | None:intergenic | 25.0% |
| ! | TTGAACATATCAACTTTCAT+TGG | + | chr6_4:84193059-84193078 | Msa1000860:intron | 25.0% |
| !! | GTTTTATGCATATTAAGCAA+TGG | + | chr6_4:84193343-84193362 | Msa1000860:intron | 25.0% |
| ! | AGTATGAAGAATCATCAAAA+AGG | - | chr6_4:84193419-84193438 | None:intergenic | 25.0% |
| !!! | AGTTTTGTTTATGAACAAGT+AGG | - | chr6_4:84193654-84193673 | None:intergenic | 25.0% |
| !! | AAACTATTTTGTACATGTGA+AGG | + | chr6_4:84193669-84193688 | Msa1000860:intron | 25.0% |
| ! | AATCCATAAGTAATATTCTG+TGG | - | chr6_4:84194012-84194031 | None:intergenic | 25.0% |
| ! | ACATATTCCATATGTAAACA+AGG | - | chr6_4:84194051-84194070 | None:intergenic | 25.0% |
| !!! | AATTCTAAGTATTGGCTTAT+TGG | - | chr6_4:84194312-84194331 | None:intergenic | 25.0% |
| ! | TAAATAAACAATAGCCACAA+AGG | - | chr6_4:84194445-84194464 | None:intergenic | 25.0% |
| ! | TGTGGCTATTGTTTATTTAA+TGG | + | chr6_4:84194446-84194465 | Msa1000860:intron | 25.0% |
| ! | GTGGCTATTGTTTATTTAAT+GGG | + | chr6_4:84194447-84194466 | Msa1000860:intron | 25.0% |
| ! | TTTAATGGGAGTAGTAAATT+TGG | + | chr6_4:84194461-84194480 | Msa1000860:intron | 25.0% |
| ! | TTAATGGGAGTAGTAAATTT+GGG | + | chr6_4:84194462-84194481 | Msa1000860:intron | 25.0% |
| !!! | TTGGATTACTGTTTTTTACA+CGG | + | chr6_4:84194628-84194647 | Msa1000860:five_prime_UTR | 25.0% |
| ! | ATGTTACCTTATTGTATTTC+CGG | - | chr6_4:84194836-84194855 | None:intergenic | 25.0% |
| !!! | TCAAGTGTTTATTTTATTGC+TGG | + | chr6_4:84194879-84194898 | Msa1000860:intron | 25.0% |
| ! | TCTTAGGGTTCAATAAAATA+AGG | - | chr6_4:84194973-84194992 | None:intergenic | 25.0% |
| ! | ATAAAACTATGAAGGTAGAA+AGG | + | chr6_4:84195297-84195316 | Msa1000860:intron | 25.0% |
| !! | TAAGAGTGTATATATAAGAG+AGG | - | chr6_4:84195381-84195400 | None:intergenic | 25.0% |
| ! | ACGATAATTGTAATGATAGA+AGG | - | chr6_4:84195490-84195509 | None:intergenic | 25.0% |
| ! | TGTATTATTTAACATGGGTA+GGG | - | chr6_4:84195805-84195824 | None:intergenic | 25.0% |
| ! | TTGTATTATTTAACATGGGT+AGG | - | chr6_4:84195806-84195825 | None:intergenic | 25.0% |
| !! | ATCAAAAATAATGGAATCTG+TGG | - | chr6_4:84196077-84196096 | None:intergenic | 25.0% |
| ! | GAGATGGTTATCAAAAATAA+TGG | - | chr6_4:84196086-84196105 | None:intergenic | 25.0% |
| ! | TTCAGTGAATTCAAATATGA+TGG | - | chr6_4:84196155-84196174 | None:intergenic | 25.0% |
| ! | AAACCAATTGAAAAAACTGT+AGG | - | chr6_4:84196344-84196363 | None:intergenic | 25.0% |
| !! | TTAATGCTTGTATGTGTTTT+TGG | + | chr6_4:84196628-84196647 | Msa1000860:three_prime_UTR | 25.0% |
| ! | TCCCTCATTTGTGTATTTTA+GGG | + | chr6_4:84192154-84192173 | Msa1000860:intron | 30.0% |
| ACCCTAAAATACACAAATGA+GGG | - | chr6_4:84192158-84192177 | None:intergenic | 30.0% | |
| AACCCTAAAATACACAAATG+AGG | - | chr6_4:84192159-84192178 | None:intergenic | 30.0% | |
| GTTTCTTCTAATTAGGTCAT+TGG | + | chr6_4:84192213-84192232 | Msa1000860:intron | 30.0% | |
| TTAGGTCATTGGAAACTAAT+CGG | + | chr6_4:84192224-84192243 | Msa1000860:intron | 30.0% | |
| TTCAAGCTGATTACACTAAA+AGG | + | chr6_4:84192256-84192275 | Msa1000860:five_prime_UTR | 30.0% | |
| !! | CGTTTATTGTTTTGTTCAGA+AGG | + | chr6_4:84192346-84192365 | Msa1000860:intron | 30.0% |
| GGAATGTTTGAAAACATGAT+TGG | + | chr6_4:84192368-84192387 | Msa1000860:intron | 30.0% | |
| ! | GATATTTGTGATGTGTCTTT+TGG | + | chr6_4:84192482-84192501 | Msa1000860:intron | 30.0% |
| ! | GTTTCTGATTTCTAATGGAT+GGG | - | chr6_4:84192586-84192605 | None:intergenic | 30.0% |
| AGTTTCTGATTTCTAATGGA+TGG | - | chr6_4:84192587-84192606 | None:intergenic | 30.0% | |
| ! | CACTAGTTTCTGATTTCTAA+TGG | - | chr6_4:84192591-84192610 | None:intergenic | 30.0% |
| TGGAACTATGTTTATAGTGA+TGG | + | chr6_4:84192635-84192654 | Msa1000860:intron | 30.0% | |
| TTGCCTTCAATTTGTATTGT+TGG | + | chr6_4:84192960-84192979 | Msa1000860:intron | 30.0% | |
| ! | AAGAACTGTAGAATCTTTTG+AGG | - | chr6_4:84193268-84193287 | None:intergenic | 30.0% |
| !!! | AAGAAAGCATTTTCCTCAAA+AGG | - | chr6_4:84193306-84193325 | None:intergenic | 30.0% |
| TGTAGCAATAATGTCAATCA+TGG | + | chr6_4:84193382-84193401 | Msa1000860:intron | 30.0% | |
| GTTACAAAATCATACTGTCT+TGG | - | chr6_4:84193460-84193479 | None:intergenic | 30.0% | |
| ACTTGATTACTTGTTCTTGT+AGG | + | chr6_4:84193552-84193571 | Msa1000860:intron | 30.0% | |
| AGAATGAGTTTGCAGAATAA+TGG | + | chr6_4:84193757-84193776 | Msa1000860:intron | 30.0% | |
| !! | TTAATGAACAAGCTTTGAGT+TGG | + | chr6_4:84193786-84193805 | Msa1000860:intron | 30.0% |
| !! | TCTTTTGGAGATTGTGTATT+GGG | + | chr6_4:84193977-84193996 | Msa1000860:intron | 30.0% |
| TAGCCACAGAATATTACTTA+TGG | + | chr6_4:84194006-84194025 | Msa1000860:intron | 30.0% | |
| ! | CAACATATCATTCAAGCTTT+TGG | - | chr6_4:84194087-84194106 | None:intergenic | 30.0% |
| TGAATGATATGTTGAGATTG+TGG | + | chr6_4:84194093-84194112 | Msa1000860:intron | 30.0% | |
| CATGAAAGTTTCATTAGCTA+TGG | - | chr6_4:84194223-84194242 | None:intergenic | 30.0% | |
| !!! | TTAGAATTTTATTTTGCCGG+TGG | + | chr6_4:84194324-84194343 | Msa1000860:intron | 30.0% |
| TAATTCATAGTTGAGGTCAA+CGG | - | chr6_4:84194372-84194391 | None:intergenic | 30.0% | |
| TATTTAATAATTGGGGCTTG+TGG | + | chr6_4:84194418-84194437 | Msa1000860:intron | 30.0% | |
| ATTTAATAATTGGGGCTTGT+GGG | + | chr6_4:84194419-84194438 | Msa1000860:intron | 30.0% | |
| TAATGGGAGTAGTAAATTTG+GGG | + | chr6_4:84194463-84194482 | Msa1000860:intron | 30.0% | |
| ATTAGAGCTGTCAATTTGAT+GGG | - | chr6_4:84194567-84194586 | None:intergenic | 30.0% | |
| ATTATGTTCTGTCTATACAC+AGG | + | chr6_4:84194592-84194611 | Msa1000860:intron | 30.0% | |
| !!! | AAGAGTTTTTGAAACAGTGA+TGG | + | chr6_4:84194761-84194780 | Msa1000860:CDS | 30.0% |
| TAGGGTTCAATAAAATAAGG+AGG | - | chr6_4:84194970-84194989 | None:intergenic | 30.0% | |
| GTCTTAAGGTTCTTATCTTA+GGG | - | chr6_4:84194988-84195007 | None:intergenic | 30.0% | |
| ! | TTTAAAGTTCACGAACAACT+CGG | + | chr6_4:84195136-84195155 | Msa1000860:intron | 30.0% |
| GATGAGTACAATGTAAAACA+TGG | - | chr6_4:84195350-84195369 | None:intergenic | 30.0% | |
| !! | GATAATTGATTCGTTGAACT+TGG | - | chr6_4:84195736-84195755 | None:intergenic | 30.0% |
| !!! | ATTATTTTAGACTATCCGAG+AGG | + | chr6_4:84195904-84195923 | Msa1000860:intron | 30.0% |
| CTACTTCAATAGAATTGAGA+TGG | - | chr6_4:84196102-84196121 | None:intergenic | 30.0% | |
| TACAATGCAGATTCAAAATC+AGG | + | chr6_4:84196124-84196143 | Msa1000860:CDS | 30.0% | |
| TTGTATCTACAAGTATAGAC+TGG | + | chr6_4:84196242-84196261 | Msa1000860:CDS | 30.0% | |
| GATAAAGAAGACTTCAAGAA+CGG | + | chr6_4:84196376-84196395 | Msa1000860:CDS | 30.0% | |
| ! | TTTTCTCATGTAGCTAATAC+TGG | - | chr6_4:84196743-84196762 | None:intergenic | 30.0% |
| ! | CTCCCTCATTTGTGTATTTT+AGG | + | chr6_4:84192153-84192172 | Msa1000860:intron | 35.0% |
| !! | TTCATTGAGAGTACTACCAA+AGG | + | chr6_4:84192662-84192681 | Msa1000860:intron | 35.0% |
| !! | ATGTCTCTTTTGGTCTTTCT+TGG | + | chr6_4:84192745-84192764 | Msa1000860:intron | 35.0% |
| ACACAACTAGTAACATGTGT+CGG | + | chr6_4:84192921-84192940 | Msa1000860:intron | 35.0% | |
| GCACCAACAATACAAATTGA+AGG | - | chr6_4:84192966-84192985 | None:intergenic | 35.0% | |
| TATTGTTGGTGCAACATAGT+AGG | + | chr6_4:84192974-84192993 | Msa1000860:intron | 35.0% | |
| TTTATACGACTATGTTGCAC+CGG | - | chr6_4:84193159-84193178 | None:intergenic | 35.0% | |
| ! | ACTTTTTACATAAGCTGAGC+TGG | + | chr6_4:84193580-84193599 | Msa1000860:intron | 35.0% |
| ! | GAGCTTATTGATGTGTCTTT+TGG | + | chr6_4:84193962-84193981 | Msa1000860:intron | 35.0% |
| !! | GTCTTTTGGAGATTGTGTAT+TGG | + | chr6_4:84193976-84193995 | Msa1000860:intron | 35.0% |
| ! | TGCATGTCCTTGTTTACATA+TGG | + | chr6_4:84194041-84194060 | Msa1000860:intron | 35.0% |
| TAAAATAGGCTCCTTTCACT+AGG | - | chr6_4:84194489-84194508 | None:intergenic | 35.0% | |
| ! | TTTTATGCCCCCTTAATATG+TGG | + | chr6_4:84194519-84194538 | Msa1000860:intron | 35.0% |
| TTTATGCCCCCTTAATATGT+GGG | + | chr6_4:84194520-84194539 | Msa1000860:intron | 35.0% | |
| TTAGAGCTGTCAATTTGATG+GGG | - | chr6_4:84194566-84194585 | None:intergenic | 35.0% | |
| GATTAGAGCTGTCAATTTGA+TGG | - | chr6_4:84194568-84194587 | None:intergenic | 35.0% | |
| TTCAAAAACTCTTCCCTCTT+CGG | - | chr6_4:84194754-84194773 | None:intergenic | 35.0% | |
| TTACCTTATTGTATTTCCGG+CGG | - | chr6_4:84194833-84194852 | None:intergenic | 35.0% | |
| GGTCTTAAGGTTCTTATCTT+AGG | - | chr6_4:84194989-84195008 | None:intergenic | 35.0% | |
| AACCTTAAGACCCATGTTTA+GGG | + | chr6_4:84194997-84195016 | Msa1000860:intron | 35.0% | |
| !!! | ACCTTTTTTTAGCTCGAGTT+CGG | + | chr6_4:84195109-84195128 | Msa1000860:intron | 35.0% |
| GAGTGTATATATAAGAGAGG+TGG | - | chr6_4:84195378-84195397 | None:intergenic | 35.0% | |
| ! | TATTTTCAAAACACCCGATG+TGG | + | chr6_4:84195409-84195428 | Msa1000860:intron | 35.0% |
| ! | ATTTTCAAAACACCCGATGT+GGG | + | chr6_4:84195410-84195429 | Msa1000860:intron | 35.0% |
| !!! | GAACTATTTTCGAGTTGGTT+CGG | + | chr6_4:84195768-84195787 | Msa1000860:intron | 35.0% |
| !! | CACAATGCTTGCTTAGTTTT+CGG | - | chr6_4:84195967-84195986 | None:intergenic | 35.0% |
| ! | TTTAAGGCTATTCCAATCCT+TGG | + | chr6_4:84196037-84196056 | Msa1000860:CDS | 35.0% |
| TTCTCTTCAGGAACAATGTT+GGG | - | chr6_4:84196280-84196299 | None:intergenic | 35.0% | |
| CCAATTGAAAAAACTGTAGG+AGG | - | chr6_4:84196341-84196360 | None:intergenic | 35.0% | |
| !!! | CCTCCTACAGTTTTTTCAAT+TGG | + | chr6_4:84196338-84196357 | Msa1000860:CDS | 35.0% |
| GAAGTCTTCTTTATCACTTG+AGG | - | chr6_4:84196371-84196390 | None:intergenic | 35.0% | |
| ! | CCACTATAACTTTTCCAATC+CGG | - | chr6_4:84196405-84196424 | None:intergenic | 35.0% |
| ! | AAGTTATAGTGGAGAAGTTG+TGG | + | chr6_4:84196413-84196432 | Msa1000860:CDS | 35.0% |
| ! | AGTTATAGTGGAGAAGTTGT+GGG | + | chr6_4:84196414-84196433 | Msa1000860:CDS | 35.0% |
| AAGACGATGAGAAACAAAAG+AGG | + | chr6_4:84196514-84196533 | Msa1000860:CDS | 35.0% | |
| AAATGAGGGAGAAGAGAACT+GGG | - | chr6_4:84192144-84192163 | None:intergenic | 40.0% | |
| ! | GTCAAAAGGGTTGTGTTTTG+AGG | + | chr6_4:84192460-84192479 | Msa1000860:intron | 40.0% |
| GTGACAAGGATCTTATCCTT+TGG | - | chr6_4:84192681-84192700 | None:intergenic | 40.0% | |
| GATAAGATCCTTGTCACTAG+AGG | + | chr6_4:84192684-84192703 | Msa1000860:intron | 40.0% | |
| CAATTCATCCTCTAGTGACA+AGG | - | chr6_4:84192695-84192714 | None:intergenic | 40.0% | |
| AAGCGTCTAGTTGTGATACA+AGG | - | chr6_4:84192772-84192791 | None:intergenic | 40.0% | |
| GTTGTGTGTTCAAGTGTGAT+GGG | - | chr6_4:84192908-84192927 | None:intergenic | 40.0% | |
| AGTTGTGTGTTCAAGTGTGA+TGG | - | chr6_4:84192909-84192928 | None:intergenic | 40.0% | |
| GTTGACTGTTGAGTCATTAC+CGG | + | chr6_4:84193083-84193102 | Msa1000860:intron | 40.0% | |
| GTACAACTCTGACATTGTCA+TGG | - | chr6_4:84193110-84193129 | None:intergenic | 40.0% | |
| ! | CTATAGATTGAAGGCATGTC+TGG | - | chr6_4:84193134-84193153 | None:intergenic | 40.0% |
| ATGCCTTCAATCTATAGTGC+CGG | + | chr6_4:84193137-84193156 | Msa1000860:intron | 40.0% | |
| TTGTGATACATAAGCTGAGC+TGG | + | chr6_4:84193524-84193543 | Msa1000860:intron | 40.0% | |
| ACACATTATGTGCCTTGCAA+TGG | + | chr6_4:84193623-84193642 | Msa1000860:intron | 40.0% | |
| AAGTAGGAGAAACCATTGCA+AGG | - | chr6_4:84193638-84193657 | None:intergenic | 40.0% | |
| !!! | AATTTTATTTTGCCGGTGGC+CGG | + | chr6_4:84194328-84194347 | Msa1000860:intron | 40.0% |
| ! | TAAATTTGGGGCCTAGTGAA+AGG | + | chr6_4:84194475-84194494 | Msa1000860:intron | 40.0% |
| !! | CACAGGTCAGGAATTGATTT+TGG | + | chr6_4:84194609-84194628 | Msa1000860:intron | 40.0% |
| TTTCCTTTGTCATCGACCTT+AGG | - | chr6_4:84194699-84194718 | None:intergenic | 40.0% | |
| TAAGGTCGATGACAAAGGAA+AGG | + | chr6_4:84194698-84194717 | Msa1000860:CDS | 40.0% | |
| !! | TTCGGTGTTCGGATGTAAAT+CGG | - | chr6_4:84194736-84194755 | None:intergenic | 40.0% |
| ! | AGTGATGGAAGTTTCTGAAG+AGG | + | chr6_4:84194776-84194795 | Msa1000860:CDS | 40.0% |
| ! | GTGATGGAAGTTTCTGAAGA+GGG | + | chr6_4:84194777-84194796 | Msa1000860:CDS | 40.0% |
| AAACCGCCGGAAATACAATA+AGG | + | chr6_4:84194827-84194846 | Msa1000860:CDS | 40.0% | |
| GAACCTTAAGACCCATGTTT+AGG | + | chr6_4:84194996-84195015 | Msa1000860:intron | 40.0% | |
| TCATTTCCAGCCCTAAACAT+GGG | - | chr6_4:84195010-84195029 | None:intergenic | 40.0% | |
| TACACAAATAGTCCCACATC+GGG | - | chr6_4:84195425-84195444 | None:intergenic | 40.0% | |
| GTACACAAATAGTCCCACAT+CGG | - | chr6_4:84195426-84195445 | None:intergenic | 40.0% | |
| TGAGTATGGTTCAACTCGTT+TGG | - | chr6_4:84195644-84195663 | None:intergenic | 40.0% | |
| !! | AGTCGAACTTGAGTTGAGTA+TGG | - | chr6_4:84195658-84195677 | None:intergenic | 40.0% |
| CAACTCAAGTTCGACTCATT+TGG | + | chr6_4:84195662-84195681 | Msa1000860:intron | 40.0% | |
| !!! | GTCTCGAACTATTTTCGAGT+TGG | + | chr6_4:84195763-84195782 | Msa1000860:intron | 40.0% |
| !! | TCGTGTGTGTACTGTTTTGA+AGG | + | chr6_4:84195837-84195856 | Msa1000860:intron | 40.0% |
| ! | ATTCTGGTCTAAGGCGTTTA+AGG | + | chr6_4:84196021-84196040 | Msa1000860:CDS | 40.0% |
| TTTAACTCCCTACCAAGGAT+TGG | - | chr6_4:84196052-84196071 | None:intergenic | 40.0% | |
| !! | ACGCTTTGAAATGCGTTTGT+TGG | - | chr6_4:84196191-84196210 | None:intergenic | 40.0% |
| AAGCGTTATAACATGCACGA+CGG | + | chr6_4:84196205-84196224 | Msa1000860:CDS | 40.0% | |
| GTTCTCTTCAGGAACAATGT+TGG | - | chr6_4:84196281-84196300 | None:intergenic | 40.0% | |
| ! | CCGGATTGGAAAAGTTATAG+TGG | + | chr6_4:84196402-84196421 | Msa1000860:CDS | 40.0% |
| TGTCATCAGAATCACCTTGT+AGG | - | chr6_4:84196456-84196475 | None:intergenic | 40.0% | |
| ! | CACAGATTCTGAAGATGAAG+TGG | + | chr6_4:84196474-84196493 | Msa1000860:CDS | 40.0% |
| ACGATGAGAAACAAAAGAGG+AGG | + | chr6_4:84196517-84196536 | Msa1000860:CDS | 40.0% | |
| GAAACAAAAGAGGAGGATGA+AGG | + | chr6_4:84196524-84196543 | Msa1000860:CDS | 40.0% | |
| TGTGGTACGTAGTACGTGAA+GGG | - | chr6_4:84191997-84192016 | None:intergenic | 45.0% | |
| AGAAGTGAGAAGAGAGACTG+TGG | - | chr6_4:84192015-84192034 | None:intergenic | 45.0% | |
| GAGAGCAGAAGAGAGATGAA+CGG | - | chr6_4:84192099-84192118 | None:intergenic | 45.0% | |
| CAAATGAGGGAGAAGAGAAC+TGG | - | chr6_4:84192145-84192164 | None:intergenic | 45.0% | |
| CCTCACTTAGAGAGACCAAA+AGG | - | chr6_4:84192518-84192537 | None:intergenic | 45.0% | |
| ! | CCTTTTGGTCTCTCTAAGTG+AGG | + | chr6_4:84192515-84192534 | Msa1000860:intron | 45.0% |
| ATGTGTCGGATTCAACCACA+CGG | + | chr6_4:84192935-84192954 | Msa1000860:intron | 45.0% | |
| AAATTGAAGGCAAGTCCGTG+TGG | - | chr6_4:84192953-84192972 | None:intergenic | 45.0% | |
| GTTTGTGTTTGTGTCGTGTC+AGG | - | chr6_4:84193002-84193021 | None:intergenic | 45.0% | |
| ACTCTGACATTGTCATGGTC+CGG | - | chr6_4:84193105-84193124 | None:intergenic | 45.0% | |
| ! | GACTCATGTAGTGCCTTTTG+AGG | + | chr6_4:84193290-84193309 | Msa1000860:intron | 45.0% |
| AGCCCTAGCCCACATATTAA+GGG | - | chr6_4:84194531-84194550 | None:intergenic | 45.0% | |
| AAGCCCTAGCCCACATATTA+AGG | - | chr6_4:84194532-84194551 | None:intergenic | 45.0% | |
| GTTCTGTCTATACACAGGTC+AGG | + | chr6_4:84194597-84194616 | Msa1000860:intron | 45.0% | |
| TTTACATCCGAACACCGAAG+AGG | + | chr6_4:84194737-84194756 | Msa1000860:CDS | 45.0% | |
| TTACATCCGAACACCGAAGA+GGG | + | chr6_4:84194738-84194757 | Msa1000860:CDS | 45.0% | |
| ! | TGGAAGTTTCTGAAGAGGGA+AGG | + | chr6_4:84194781-84194800 | Msa1000860:CDS | 45.0% |
| AGCCCTAAACATGGGTCTTA+AGG | - | chr6_4:84195002-84195021 | None:intergenic | 45.0% | |
| ! | TTAAGACCCATGTTTAGGGC+TGG | + | chr6_4:84195001-84195020 | Msa1000860:intron | 45.0% |
| CTCATTTCCAGCCCTAAACA+TGG | - | chr6_4:84195011-84195030 | None:intergenic | 45.0% | |
| ! | GAGCTCGACTCGATAAGAAT+TGG | + | chr6_4:84195053-84195072 | Msa1000860:intron | 45.0% |
| CGACTCGATAAGAATTGGCT+CGG | + | chr6_4:84195058-84195077 | Msa1000860:intron | 45.0% | |
| GCCGAACTCGAGCTAAAAAA+AGG | - | chr6_4:84195113-84195132 | None:intergenic | 45.0% | |
| ! | ACGAACAACTCGGTTTGACT+CGG | + | chr6_4:84195146-84195165 | Msa1000860:intron | 45.0% |
| CTTCTTCAATCGTCTCCTCT+CGG | - | chr6_4:84195922-84195941 | None:intergenic | 45.0% | |
| GAGGAGACGATTGAAGAAGA+AGG | + | chr6_4:84195923-84195942 | Msa1000860:CDS | 45.0% | |
| ! | CAAGCATTGTGTTAAGCGCA+AGG | + | chr6_4:84195976-84195995 | Msa1000860:CDS | 45.0% |
| GAACAAATTTCGCGCTTACC+TGG | + | chr6_4:84195998-84196017 | Msa1000860:CDS | 45.0% | |
| CTTACCTGGATTCTGGTCTA+AGG | + | chr6_4:84196012-84196031 | Msa1000860:CDS | 45.0% | |
| AGGCTATTCCAATCCTTGGT+AGG | + | chr6_4:84196041-84196060 | Msa1000860:CDS | 45.0% | |
| GGCTATTCCAATCCTTGGTA+GGG | + | chr6_4:84196042-84196061 | Msa1000860:CDS | 45.0% | |
| TGGCATTTAACTCCCTACCA+AGG | - | chr6_4:84196057-84196076 | None:intergenic | 45.0% | |
| AAGACTTCAAGAACGGAGAC+CGG | + | chr6_4:84196383-84196402 | Msa1000860:CDS | 45.0% | |
| CAGAATCACCTTGTAGGTGA+TGG | - | chr6_4:84196450-84196469 | None:intergenic | 45.0% | |
| !!! | GAAGGTCGTGCTACTTTTCT+AGG | + | chr6_4:84196542-84196561 | Msa1000860:exon | 45.0% |
| !!! | TAGAATTTTTATTTAATAAT+TGG | + | chr6_4:84194409-84194428 | Msa1000860:intron | 5.0% |
| !!! | AGAATTTTTATTTAATAATT+GGG | + | chr6_4:84194410-84194429 | Msa1000860:intron | 5.0% |
| !!! | ATATCAATTTTTTTTTTAAA+AGG | + | chr6_4:84194854-84194873 | Msa1000860:intron | 5.0% |
| CTGTGGTACGTAGTACGTGA+AGG | - | chr6_4:84191998-84192017 | None:intergenic | 50.0% | |
| AGCAGAAGAGAGATGAACGG+CGG | - | chr6_4:84192096-84192115 | None:intergenic | 50.0% | |
| CTCTTCTGCTCTCTTCTCCT+CGG | + | chr6_4:84192106-84192125 | Msa1000860:five_prime_UTR | 50.0% | |
| ! | GCACCGGCACTATAGATTGA+AGG | - | chr6_4:84193143-84193162 | None:intergenic | 50.0% |
| TCATAGTTGAGGTCAACGGC+TGG | - | chr6_4:84194368-84194387 | None:intergenic | 50.0% | |
| CCCTAGCCCACATATTAAGG+GGG | - | chr6_4:84194529-84194548 | None:intergenic | 50.0% | |
| ! | CCCCCTTAATATGTGGGCTA+GGG | + | chr6_4:84194526-84194545 | Msa1000860:intron | 50.0% |
| GCCCTAGCCCACATATTAAG+GGG | - | chr6_4:84194530-84194549 | None:intergenic | 50.0% | |
| ! | ACTTAGCCTTCAGCCTCCTA+AGG | + | chr6_4:84194680-84194699 | Msa1000860:CDS | 50.0% |
| CCTTTGTCATCGACCTTAGG+AGG | - | chr6_4:84194696-84194715 | None:intergenic | 50.0% | |
| CCTCCTAAGGTCGATGACAA+AGG | + | chr6_4:84194693-84194712 | Msa1000860:CDS | 50.0% | |
| GGTCGATGACAAAGGAAAGG+AGG | + | chr6_4:84194701-84194720 | Msa1000860:CDS | 50.0% | |
| !! | ACTCTTCCCTCTTCGGTGTT+CGG | - | chr6_4:84194747-84194766 | None:intergenic | 50.0% |
| TTATCGAGTCGAGCTCAGAC+AGG | - | chr6_4:84195049-84195068 | None:intergenic | 50.0% | |
| !! | ACAACTCGGTTTGACTCGGT+AGG | + | chr6_4:84195150-84195169 | Msa1000860:intron | 50.0% |
| TTTCGCGCTTACCTGGATTC+TGG | + | chr6_4:84196005-84196024 | Msa1000860:CDS | 50.0% | |
| AACGCCTTAGACCAGAATCC+AGG | - | chr6_4:84196019-84196038 | None:intergenic | 50.0% | |
| TGTTCCTGAAGAGAACGACG+AGG | + | chr6_4:84196285-84196304 | Msa1000860:CDS | 50.0% | |
| TTCAAGAACGGAGACCGGAT+TGG | + | chr6_4:84196388-84196407 | Msa1000860:CDS | 50.0% | |
| GATCCTCTCCATCACCTACA+AGG | + | chr6_4:84196439-84196458 | Msa1000860:CDS | 50.0% | |
| !! | TCACCTTGTAGGTGATGGAG+AGG | - | chr6_4:84196445-84196464 | None:intergenic | 50.0% |
| CTGGGAAGAGAAACTGACCG+AGG | - | chr6_4:84192126-84192145 | None:intergenic | 55.0% | |
| GCCCCCTTAATATGTGGGCT+AGG | + | chr6_4:84194525-84194544 | Msa1000860:intron | 55.0% | |
| GAGGCTGAAGGCTAAGTCGA+TGG | - | chr6_4:84194677-84194696 | None:intergenic | 55.0% | |
| CATCGACCTTAGGAGGCTGA+AGG | - | chr6_4:84194689-84194708 | None:intergenic | 55.0% | |
| CAGCGATGATGCAAAACCGC+CGG | + | chr6_4:84194814-84194833 | Msa1000860:CDS | 55.0% | |
| ! | TCGGCTTGAAACTCGACTCG+AGG | + | chr6_4:84195077-84195096 | Msa1000860:intron | 55.0% |
| TCCTGAAGAGAACGACGAGG+AGG | + | chr6_4:84196288-84196307 | Msa1000860:CDS | 55.0% | |
| TCCTCCTCGTCGTTCTCTTC+AGG | - | chr6_4:84196292-84196311 | None:intergenic | 55.0% | |
| GAGATGAACGGCGGTGACAG+AGG | - | chr6_4:84192087-84192106 | None:intergenic | 60.0% | |
| ! | GCTGGTCTATGCCGGATCTC+CGG | - | chr6_4:84194350-84194369 | None:intergenic | 60.0% |
| !! | GGTCAACGGCTGGTCTATGC+CGG | - | chr6_4:84194358-84194377 | None:intergenic | 60.0% |
| TTGGGGCTTGTGGGCCTTTG+TGG | + | chr6_4:84194428-84194447 | Msa1000860:intron | 60.0% | |
| ACAGAGGCGAACGGCGGTGA+CGG | - | chr6_4:84192071-84192090 | None:intergenic | 65.0% | |
| ACGGCGGTGACAGAGGCGAA+CGG | - | chr6_4:84192080-84192099 | None:intergenic | 65.0% | |
| TTTGCCGGTGGCCGGAGATC+CGG | + | chr6_4:84194336-84194355 | Msa1000860:intron | 65.0% | |
| TATGCCGGATCTCCGGCCAC+CGG | - | chr6_4:84194343-84194362 | None:intergenic | 65.0% | |
| GATTGGAGGCGGCGGCGATG+GGG | - | chr6_4:84192038-84192057 | None:intergenic | 70.0% | |
| CGATTGGAGGCGGCGGCGAT+GGG | - | chr6_4:84192039-84192058 | None:intergenic | 70.0% | |
| ACGACGGCGATTGGAGGCGG+CGG | - | chr6_4:84192046-84192065 | None:intergenic | 70.0% | |
| GGGACGACGGCGATTGGAGG+CGG | - | chr6_4:84192049-84192068 | None:intergenic | 70.0% | |
| ACGGGGACGACGGCGATTGG+AGG | - | chr6_4:84192052-84192071 | None:intergenic | 70.0% | |
| ! | GTGACGGGGACGACGGCGAT+TGG | - | chr6_4:84192055-84192074 | None:intergenic | 70.0% |
| !! | AACGGCGGTGACGGGGACGA+CGG | - | chr6_4:84192062-84192081 | None:intergenic | 70.0% |
| AGAGGCGAACGGCGGTGACG+GGG | - | chr6_4:84192069-84192088 | None:intergenic | 70.0% | |
| CAGAGGCGAACGGCGGTGAC+GGG | - | chr6_4:84192070-84192089 | None:intergenic | 70.0% | |
| GCGGTGACAGAGGCGAACGG+CGG | - | chr6_4:84192077-84192096 | None:intergenic | 70.0% | |
| GCGATTGGAGGCGGCGGCGA+TGG | - | chr6_4:84192040-84192059 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 84191960 | 84196764 | 84191960 | ID=Msa1000860;Name=Msa1000860 |
| chr6_4 | mRNA | 84191960 | 84196764 | 84191960 | ID=Msa1000860-mRNA-1;Parent=Msa1000860;Name=Msa1000860-mRNA-1;_AED=0.00;_eAED=0.00;_QI=261|1|1|1|0.33|0.75|4|221|273 |
| chr6_4 | exon | 84191960 | 84192127 | 84191960 | ID=Msa1000860-mRNA-1:exon:16353;Parent=Msa1000860-mRNA-1 |
| chr6_4 | exon | 84192228 | 84192277 | 84192228 | ID=Msa1000860-mRNA-1:exon:16354;Parent=Msa1000860-mRNA-1 |
| chr6_4 | exon | 84194614 | 84194848 | 84194614 | ID=Msa1000860-mRNA-1:exon:16355;Parent=Msa1000860-mRNA-1 |
| chr6_4 | exon | 84195914 | 84196764 | 84195914 | ID=Msa1000860-mRNA-1:exon:16356;Parent=Msa1000860-mRNA-1 |
| chr6_4 | five_prime_UTR | 84191960 | 84192127 | 84191960 | ID=Msa1000860-mRNA-1:five_prime_utr;Parent=Msa1000860-mRNA-1 |
| chr6_4 | five_prime_UTR | 84192228 | 84192277 | 84192228 | ID=Msa1000860-mRNA-1:five_prime_utr;Parent=Msa1000860-mRNA-1 |
| chr6_4 | five_prime_UTR | 84194614 | 84194656 | 84194614 | ID=Msa1000860-mRNA-1:five_prime_utr;Parent=Msa1000860-mRNA-1 |
| chr6_4 | CDS | 84194657 | 84194848 | 84194657 | ID=Msa1000860-mRNA-1:cds;Parent=Msa1000860-mRNA-1 |
| chr6_4 | CDS | 84195914 | 84196543 | 84195914 | ID=Msa1000860-mRNA-1:cds;Parent=Msa1000860-mRNA-1 |
| chr6_4 | three_prime_UTR | 84196544 | 84196764 | 84196544 | ID=Msa1000860-mRNA-1:three_prime_utr;Parent=Msa1000860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
