Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1000250 | XP_013453139.2 | 82.278 | 79 | 14 | 0 | 5 | 83 | 167 | 245 | 4.39e-33 | 132 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1000250 | sp|V9M398|RUN1_VITRO | 38.750 | 80 | 48 | 1 | 7 | 86 | 175 | 253 | 1.44e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1000250 | G7KPI1 | 82.278 | 79 | 14 | 0 | 5 | 83 | 167 | 245 | 3.42e-33 | 131 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa1000250 | 0.806392 | 8.413569e-50 | -8.615850e-47 |
| Msa0006110 | Msa1000250 | 0.828969 | 6.689694e-55 | -8.615850e-47 |
| Msa0011170 | Msa1000250 | 0.806199 | 9.238316e-50 | -8.615850e-47 |
| Msa0014710 | Msa1000250 | 0.812852 | 3.442340e-51 | -8.615850e-47 |
| Msa0017510 | Msa1000250 | 0.800471 | 1.419092e-48 | -8.615850e-47 |
| Msa0018650 | Msa1000250 | 0.802161 | 6.397637e-49 | -8.615850e-47 |
| Msa0020930 | Msa1000250 | 0.809861 | 1.534706e-50 | -8.615850e-47 |
| Msa0036140 | Msa1000250 | 0.819868 | 9.263646e-53 | -8.615850e-47 |
| Msa0045790 | Msa1000250 | 0.822941 | 1.808823e-53 | -8.615850e-47 |
| Msa0046160 | Msa1000250 | 0.822020 | 2.960723e-53 | -8.615850e-47 |
| Msa0068680 | Msa1000250 | 0.813454 | 2.539174e-51 | -8.615850e-47 |
| Msa0075880 | Msa1000250 | 0.816335 | 5.830257e-52 | -8.615850e-47 |
| Msa0078900 | Msa1000250 | 0.803421 | 3.513598e-49 | -8.615850e-47 |
| Msa0079070 | Msa1000250 | 0.811335 | 7.371254e-51 | -8.615850e-47 |
| Msa0084380 | Msa1000250 | 0.815565 | 8.662174e-52 | -8.615850e-47 |
| Msa0091210 | Msa1000250 | -0.816895 | 4.367573e-52 | -8.615850e-47 |
| Msa0091250 | Msa1000250 | -0.805741 | 1.153017e-49 | -8.615850e-47 |
| Msa0095560 | Msa1000250 | 0.828947 | 6.770070e-55 | -8.615850e-47 |
| Msa0100090 | Msa1000250 | 0.802696 | 4.962404e-49 | -8.615850e-47 |
| Msa0105070 | Msa1000250 | 0.805165 | 1.522855e-49 | -8.615850e-47 |
| Msa0114060 | Msa1000250 | 0.847172 | 1.368360e-59 | -8.615850e-47 |
| Msa0613440 | Msa1000250 | 0.806895 | 6.587172e-50 | -8.615850e-47 |
| Msa0621490 | Msa1000250 | 0.802976 | 4.345157e-49 | -8.615850e-47 |
| Msa0622170 | Msa1000250 | -0.809233 | 2.093382e-50 | -8.615850e-47 |
| Msa0625720 | Msa1000250 | 0.807219 | 5.625175e-50 | -8.615850e-47 |
| Msa0629510 | Msa1000250 | 0.811991 | 5.307087e-51 | -8.615850e-47 |
| Msa0632740 | Msa1000250 | 0.810451 | 1.145485e-50 | -8.615850e-47 |
| Msa0636020 | Msa1000250 | 0.819517 | 1.113963e-52 | -8.615850e-47 |
| Msa0637900 | Msa1000250 | 0.828424 | 9.059934e-55 | -8.615850e-47 |
| Msa0648880 | Msa1000250 | 0.814593 | 1.423715e-51 | -8.615850e-47 |
| Msa0654930 | Msa1000250 | -0.810893 | 9.189520e-51 | -8.615850e-47 |
| Msa0657610 | Msa1000250 | 0.813470 | 2.518612e-51 | -8.615850e-47 |
| Msa0658570 | Msa1000250 | 0.813525 | 2.449593e-51 | -8.615850e-47 |
| Msa0661650 | Msa1000250 | 0.829800 | 4.202175e-55 | -8.615850e-47 |
| Msa0679290 | Msa1000250 | -0.819566 | 1.086117e-52 | -8.615850e-47 |
| Msa0680660 | Msa1000250 | 0.804617 | 1.982391e-49 | -8.615850e-47 |
| Msa0683510 | Msa1000250 | 0.807043 | 6.128634e-50 | -8.615850e-47 |
| Msa0688070 | Msa1000250 | 0.815488 | 9.008914e-52 | -8.615850e-47 |
| Msa0691380 | Msa1000250 | 0.821423 | 4.068804e-53 | -8.615850e-47 |
| Msa0693380 | Msa1000250 | 0.807347 | 5.283862e-50 | -8.615850e-47 |
| Msa0703780 | Msa1000250 | 0.801666 | 8.087055e-49 | -8.615850e-47 |
| Msa0711790 | Msa1000250 | 0.800190 | 1.619191e-48 | -8.615850e-47 |
| Msa0715410 | Msa1000250 | 0.801188 | 1.013199e-48 | -8.615850e-47 |
| Msa0724210 | Msa1000250 | 0.831829 | 1.336708e-55 | -8.615850e-47 |
| Msa0727710 | Msa1000250 | 0.806511 | 7.940482e-50 | -8.615850e-47 |
| Msa0731940 | Msa1000250 | 0.843312 | 1.514022e-58 | -8.615850e-47 |
| Msa0735170 | Msa1000250 | 0.803739 | 3.018525e-49 | -8.615850e-47 |
| Msa0737120 | Msa1000250 | 0.812324 | 4.489723e-51 | -8.615850e-47 |
| Msa0740510 | Msa1000250 | 0.806272 | 8.914284e-50 | -8.615850e-47 |
| Msa0744040 | Msa1000250 | 0.825892 | 3.658653e-54 | -8.615850e-47 |
| Msa0751850 | Msa1000250 | 0.802977 | 4.342390e-49 | -8.615850e-47 |
| Msa0753720 | Msa1000250 | 0.805672 | 1.192489e-49 | -8.615850e-47 |
| Msa0760130 | Msa1000250 | 0.839833 | 1.250951e-57 | -8.615850e-47 |
| Msa0762970 | Msa1000250 | 0.811500 | 6.786528e-51 | -8.615850e-47 |
| Msa0766630 | Msa1000250 | 0.815513 | 8.897798e-52 | -8.615850e-47 |
| Msa0767300 | Msa1000250 | 0.806169 | 9.370532e-50 | -8.615850e-47 |
| Msa0790510 | Msa1000250 | 0.808656 | 2.781684e-50 | -8.615850e-47 |
| Msa0797170 | Msa1000250 | 0.802615 | 5.156881e-49 | -8.615850e-47 |
| Msa0810220 | Msa1000250 | 0.812831 | 3.478571e-51 | -8.615850e-47 |
| Msa0820770 | Msa1000250 | 0.804307 | 2.299842e-49 | -8.615850e-47 |
| Msa0824660 | Msa1000250 | 0.807734 | 4.372891e-50 | -8.615850e-47 |
| Msa0830510 | Msa1000250 | 0.802681 | 4.999903e-49 | -8.615850e-47 |
| Msa0831850 | Msa1000250 | 0.808235 | 3.421952e-50 | -8.615850e-47 |
| Msa0832340 | Msa1000250 | 0.810378 | 1.187631e-50 | -8.615850e-47 |
| Msa0834880 | Msa1000250 | 0.811835 | 5.739024e-51 | -8.615850e-47 |
| Msa0835800 | Msa1000250 | 0.817306 | 3.530876e-52 | -8.615850e-47 |
| Msa0131770 | Msa1000250 | 0.800544 | 1.370960e-48 | -8.615850e-47 |
| Msa0136070 | Msa1000250 | 0.801023 | 1.095056e-48 | -8.615850e-47 |
| Msa0137100 | Msa1000250 | 0.809491 | 1.842969e-50 | -8.615850e-47 |
| Msa0140500 | Msa1000250 | -0.829001 | 6.570894e-55 | -8.615850e-47 |
| Msa0157290 | Msa1000250 | 0.801535 | 8.601796e-49 | -8.615850e-47 |
| Msa0159930 | Msa1000250 | 0.825418 | 4.738967e-54 | -8.615850e-47 |
| Msa0165220 | Msa1000250 | 0.809527 | 1.811152e-50 | -8.615850e-47 |
| Msa0171540 | Msa1000250 | 0.822569 | 2.208415e-53 | -8.615850e-47 |
| Msa0175740 | Msa1000250 | 0.812318 | 4.504134e-51 | -8.615850e-47 |
| Msa0178510 | Msa1000250 | 0.808712 | 2.706428e-50 | -8.615850e-47 |
| Msa0180500 | Msa1000250 | 0.830712 | 2.517213e-55 | -8.615850e-47 |
| Msa0188150 | Msa1000250 | 0.813626 | 2.326576e-51 | -8.615850e-47 |
| Msa0188830 | Msa1000250 | 0.801015 | 1.099123e-48 | -8.615850e-47 |
| Msa0197660 | Msa1000250 | 0.850480 | 1.652421e-60 | -8.615850e-47 |
| Msa0204840 | Msa1000250 | 0.818666 | 1.740056e-52 | -8.615850e-47 |
| Msa0211150 | Msa1000250 | 0.806826 | 6.810528e-50 | -8.615850e-47 |
| Msa0212990 | Msa1000250 | 0.818942 | 1.506391e-52 | -8.615850e-47 |
| Msa0220580 | Msa1000250 | 0.819610 | 1.061196e-52 | -8.615850e-47 |
| Msa0223410 | Msa1000250 | -0.815009 | 1.151234e-51 | -8.615850e-47 |
| Msa0237310 | Msa1000250 | 0.820015 | 8.572449e-53 | -8.615850e-47 |
| Msa0365780 | Msa1000250 | 0.802658 | 5.054446e-49 | -8.615850e-47 |
| Msa0367870 | Msa1000250 | 0.826804 | 2.218242e-54 | -8.615850e-47 |
| Msa0376350 | Msa1000250 | 0.820875 | 5.444241e-53 | -8.615850e-47 |
| Msa0381610 | Msa1000250 | -0.836198 | 1.076737e-56 | -8.615850e-47 |
| Msa0388960 | Msa1000250 | 0.800797 | 1.217899e-48 | -8.615850e-47 |
| Msa0390400 | Msa1000250 | -0.809915 | 1.494525e-50 | -8.615850e-47 |
| Msa0392040 | Msa1000250 | -0.800046 | 1.732082e-48 | -8.615850e-47 |
| Msa0393080 | Msa1000250 | 0.807397 | 5.157413e-50 | -8.615850e-47 |
| Msa0393620 | Msa1000250 | 0.829475 | 5.042606e-55 | -8.615850e-47 |
| Msa0395790 | Msa1000250 | 0.818377 | 2.023574e-52 | -8.615850e-47 |
| Msa0405130 | Msa1000250 | 0.815762 | 7.828518e-52 | -8.615850e-47 |
| Msa0411390 | Msa1000250 | 0.802303 | 5.981993e-49 | -8.615850e-47 |
| Msa0424790 | Msa1000250 | 0.814033 | 1.892602e-51 | -8.615850e-47 |
| Msa0426900 | Msa1000250 | 0.804607 | 1.991699e-49 | -8.615850e-47 |
| Msa0428080 | Msa1000250 | 0.813841 | 2.087156e-51 | -8.615850e-47 |
| Msa0432670 | Msa1000250 | 0.808746 | 2.661774e-50 | -8.615850e-47 |
| Msa0436760 | Msa1000250 | 0.816475 | 5.425800e-52 | -8.615850e-47 |
| Msa0439970 | Msa1000250 | 0.818222 | 2.194165e-52 | -8.615850e-47 |
| Msa0440750 | Msa1000250 | 0.835264 | 1.856804e-56 | -8.615850e-47 |
| Msa0444750 | Msa1000250 | -0.807349 | 5.279838e-50 | -8.615850e-47 |
| Msa0453640 | Msa1000250 | 0.814552 | 1.453531e-51 | -8.615850e-47 |
| Msa0455760 | Msa1000250 | 0.807412 | 5.120128e-50 | -8.615850e-47 |
| Msa0460590 | Msa1000250 | 0.805688 | 1.183109e-49 | -8.615850e-47 |
| Msa0464260 | Msa1000250 | 0.802109 | 6.558205e-49 | -8.615850e-47 |
| Msa0464680 | Msa1000250 | 0.839709 | 1.346997e-57 | -8.615850e-47 |
| Msa0469940 | Msa1000250 | -0.820504 | 6.624261e-53 | -8.615850e-47 |
| Msa0479340 | Msa1000250 | 0.807923 | 3.987584e-50 | -8.615850e-47 |
| Msa0998690 | Msa1000250 | 0.802380 | 5.767446e-49 | -8.615850e-47 |
| Msa1000160 | Msa1000250 | 0.836737 | 7.852461e-57 | -8.615850e-47 |
| Msa1000170 | Msa1000250 | 0.803736 | 3.022842e-49 | -8.615850e-47 |
| Msa1000250 | Msa1000290 | 0.802720 | 4.907849e-49 | -8.615850e-47 |
| Msa1000250 | Msa1001390 | 0.800204 | 1.607979e-48 | -8.615850e-47 |
| Msa1000250 | Msa1003620 | 0.819617 | 1.057027e-52 | -8.615850e-47 |
| Msa1000250 | Msa1007230 | 0.825678 | 4.111667e-54 | -8.615850e-47 |
| Msa1000250 | Msa1014540 | 0.808385 | 3.178670e-50 | -8.615850e-47 |
| Msa1000250 | Msa1016320 | 0.807559 | 4.765212e-50 | -8.615850e-47 |
| Msa1000250 | Msa1019000 | 0.809231 | 2.096150e-50 | -8.615850e-47 |
| Msa1000250 | Msa1028970 | 0.816692 | 4.851564e-52 | -8.615850e-47 |
| Msa1000250 | Msa1029240 | 0.804252 | 2.362310e-49 | -8.615850e-47 |
| Msa1000250 | Msa1036610 | 0.810542 | 1.094533e-50 | -8.615850e-47 |
| Msa1000250 | Msa1039710 | -0.810699 | 1.012245e-50 | -8.615850e-47 |
| Msa1000250 | Msa1046460 | 0.815232 | 1.027188e-51 | -8.615850e-47 |
| Msa1000250 | Msa1052330 | 0.825947 | 3.550334e-54 | -8.615850e-47 |
| Msa1000250 | Msa1054990 | 0.809089 | 2.248145e-50 | -8.615850e-47 |
| Msa1000250 | Msa1058710 | 0.802799 | 4.727196e-49 | -8.615850e-47 |
| Msa1000250 | Msa1075220 | -0.815059 | 1.122463e-51 | -8.615850e-47 |
| Msa1000250 | Msa1075540 | 0.809334 | 1.991856e-50 | -8.615850e-47 |
| Msa1000250 | Msa1075650 | 0.825162 | 5.447795e-54 | -8.615850e-47 |
| Msa1000250 | Msa1076960 | 0.804773 | 1.838812e-49 | -8.615850e-47 |
| Msa1000250 | Msa1079430 | 0.800830 | 1.198891e-48 | -8.615850e-47 |
| Msa1000250 | Msa1081330 | 0.804760 | 1.850597e-49 | -8.615850e-47 |
| Msa1000250 | Msa1082500 | 0.824740 | 6.853685e-54 | -8.615850e-47 |
| Msa1000250 | Msa1082580 | 0.805080 | 1.586164e-49 | -8.615850e-47 |
| Msa1000250 | Msa1098250 | 0.804697 | 1.907028e-49 | -8.615850e-47 |
| Msa1000250 | Msa1104090 | 0.823455 | 1.372336e-53 | -8.615850e-47 |
| Msa1000250 | Msa1111870 | 0.809723 | 1.643410e-50 | -8.615850e-47 |
| Msa1000250 | Msa1113170 | 0.810598 | 1.064627e-50 | -8.615850e-47 |
| Msa1000250 | Msa1116130 | -0.800316 | 1.526048e-48 | -8.615850e-47 |
| Msa1000250 | Msa1118610 | 0.824246 | 8.953401e-54 | -8.615850e-47 |
| Msa1000250 | Msa1118760 | 0.800009 | 1.761626e-48 | -8.615850e-47 |
| Msa1000250 | Msa1121480 | 0.820556 | 6.445910e-53 | -8.615850e-47 |
| Msa1000250 | Msa1121490 | 0.854115 | 1.526127e-61 | -8.615850e-47 |
| Msa1000250 | Msa1122860 | 0.810919 | 9.070373e-51 | -8.615850e-47 |
| Msa1000250 | Msa1130550 | 0.802708 | 4.935093e-49 | -8.615850e-47 |
| Msa1000250 | Msa1131220 | 0.807493 | 4.921543e-50 | -8.615850e-47 |
| Msa1000250 | Msa1137570 | 0.804854 | 1.768691e-49 | -8.615850e-47 |
| Msa1000250 | Msa1139000 | -0.810378 | 1.187641e-50 | -8.615850e-47 |
| Msa1000250 | Msa1144720 | -0.814119 | 1.811993e-51 | -8.615850e-47 |
| Msa1000250 | Msa1144750 | 0.803244 | 3.823199e-49 | -8.615850e-47 |
| Msa1000250 | Msa1146290 | 0.805468 | 1.315820e-49 | -8.615850e-47 |
| Msa1000250 | Msa1147740 | 0.808104 | 3.649370e-50 | -8.615850e-47 |
| Msa1000250 | Msa1154280 | 0.820406 | 6.975111e-53 | -8.615850e-47 |
| Msa1000250 | Msa1158310 | 0.815024 | 1.142486e-51 | -8.615850e-47 |
| Msa1000250 | Msa1162550 | -0.815708 | 8.049801e-52 | -8.615850e-47 |
| Msa1000250 | Msa1162780 | 0.833884 | 4.126368e-56 | -8.615850e-47 |
| Msa1000250 | Msa1171710 | 0.804951 | 1.687787e-49 | -8.615850e-47 |
| Msa1000250 | Msa1185110 | 0.819148 | 1.352482e-52 | -8.615850e-47 |
| Msa1000250 | Msa1186950 | -0.830080 | 3.592043e-55 | -8.615850e-47 |
| Msa1000250 | Msa1194160 | 0.805039 | 1.618225e-49 | -8.615850e-47 |
| Msa1000250 | Msa1204530 | 0.815032 | 1.137925e-51 | -8.615850e-47 |
| Msa1000250 | Msa1204630 | 0.801999 | 6.908815e-49 | -8.615850e-47 |
| Msa1000250 | Msa1215050 | 0.805950 | 1.042207e-49 | -8.615850e-47 |
| Msa1000250 | Msa1224480 | 0.813740 | 2.196183e-51 | -8.615850e-47 |
| Msa1000250 | Msa1238820 | 0.803816 | 2.910415e-49 | -8.615850e-47 |
| Msa1000250 | Msa1238930 | 0.840578 | 7.989494e-58 | -8.615850e-47 |
| Msa1000250 | Msa1242670 | 0.802300 | 5.990736e-49 | -8.615850e-47 |
| Msa1000250 | Msa1243870 | 0.803089 | 4.116975e-49 | -8.615850e-47 |
| Msa1000250 | Msa1246360 | 0.804034 | 2.621182e-49 | -8.615850e-47 |
| Msa1000250 | Msa1246510 | 0.806842 | 6.758902e-50 | -8.615850e-47 |
| Msa1000250 | Msa1249490 | 0.804632 | 1.967755e-49 | -8.615850e-47 |
| Msa1000250 | Msa1258890 | 0.800165 | 1.637697e-48 | -8.615850e-47 |
| Msa1000250 | Msa1267610 | 0.804152 | 2.477386e-49 | -8.615850e-47 |
| Msa1000250 | Msa1277660 | 0.805346 | 1.395728e-49 | -8.615850e-47 |
| Msa1000250 | Msa1282580 | -0.816304 | 5.926578e-52 | -8.615850e-47 |
| Msa1000250 | Msa1284680 | 0.823036 | 1.719385e-53 | -8.615850e-47 |
| Msa1000250 | Msa1287460 | 0.834114 | 3.612964e-56 | -8.615850e-47 |
| Msa1000250 | Msa1297290 | 0.815699 | 8.088596e-52 | -8.615850e-47 |
| Msa1000250 | Msa1300970 | 0.813254 | 2.808726e-51 | -8.615850e-47 |
| Msa1000250 | Msa1304890 | -0.813779 | 2.153374e-51 | -8.615850e-47 |
| Msa1000250 | Msa1305810 | 0.804934 | 1.701983e-49 | -8.615850e-47 |
| Msa1000250 | Msa1308870 | 0.812222 | 4.725018e-51 | -8.615850e-47 |
| Msa1000250 | Msa1309030 | 0.803593 | 3.237237e-49 | -8.615850e-47 |
| Msa1000250 | Msa1322890 | 0.802208 | 6.257687e-49 | -8.615850e-47 |
| Msa1000250 | Msa1330170 | 0.825893 | 3.656305e-54 | -8.615850e-47 |
| Msa1000250 | Msa1330180 | 0.813415 | 2.589273e-51 | -8.615850e-47 |
| Msa1000250 | Msa1331000 | 0.816959 | 4.224888e-52 | -8.615850e-47 |
| Msa1000250 | Msa1332000 | 0.824014 | 1.015492e-53 | -8.615850e-47 |
| Msa1000250 | Msa1332070 | 0.823516 | 1.328393e-53 | -8.615850e-47 |
| Msa1000250 | Msa1341520 | 0.803846 | 2.868956e-49 | -8.615850e-47 |
| Msa1000250 | Msa1348490 | 0.810412 | 1.167818e-50 | -8.615850e-47 |
| Msa1000250 | Msa1353470 | 0.801091 | 1.060287e-48 | -8.615850e-47 |
| Msa1000250 | Msa1372760 | 0.811809 | 5.814943e-51 | -8.615850e-47 |
| Msa1000250 | Msa1374470 | 0.818088 | 2.352603e-52 | -8.615850e-47 |
| Msa1000250 | Msa1376890 | 0.811485 | 6.838906e-51 | -8.615850e-47 |
| Msa1000250 | Msa1378940 | 0.820243 | 7.601027e-53 | -8.615850e-47 |
| Msa1000250 | Msa1385000 | 0.816806 | 4.574730e-52 | -8.615850e-47 |
| Msa1000250 | Msa1390700 | 0.812556 | 3.994632e-51 | -8.615850e-47 |
| Msa1000250 | Msa1392260 | 0.813912 | 2.013353e-51 | -8.615850e-47 |
| Msa1000250 | Msa1392910 | 0.814583 | 1.430677e-51 | -8.615850e-47 |
| Msa1000250 | Msa1394380 | 0.813230 | 2.843231e-51 | -8.615850e-47 |
| Msa1000250 | Msa1395900 | 0.809157 | 2.173703e-50 | -8.615850e-47 |
| Msa1000250 | Msa1409700 | 0.822034 | 2.939654e-53 | -8.615850e-47 |
| Msa1000250 | Msa1410680 | 0.816762 | 4.677718e-52 | -8.615850e-47 |
| Msa1000250 | Msa1412640 | 0.810527 | 1.102786e-50 | -8.615850e-47 |
| Msa1000250 | Msa1416150 | 0.817442 | 3.290309e-52 | -8.615850e-47 |
| Msa1000250 | Msa1420820 | 0.813423 | 2.579183e-51 | -8.615850e-47 |
| Msa1000250 | Msa1424750 | 0.803203 | 3.899175e-49 | -8.615850e-47 |
| Msa1000250 | Msa1436480 | 0.822078 | 2.871170e-53 | -8.615850e-47 |
| Msa1000250 | Msa1440560 | 0.804535 | 2.061443e-49 | -8.615850e-47 |
| Msa1000250 | Msa1440740 | 0.809508 | 1.828011e-50 | -8.615850e-47 |
| Msa1000250 | Msa1445390 | -0.827989 | 1.153381e-54 | -8.615850e-47 |
| Msa1000250 | Msa1449340 | -0.828089 | 1.090946e-54 | -8.615850e-47 |
| Msa1000250 | Msa1454620 | 0.808679 | 2.750718e-50 | -8.615850e-47 |
| Msa1000250 | Msa1456670 | 0.815460 | 9.138888e-52 | -8.615850e-47 |
| Msa1000250 | Msa1457040 | 0.802890 | 4.524954e-49 | -8.615850e-47 |
| Msa1000250 | Msa1458340 | 0.803346 | 3.641823e-49 | -8.615850e-47 |
| Msa1000250 | Msa1459050 | 0.803573 | 3.268902e-49 | -8.615850e-47 |
| Msa1000250 | Msa1460050 | 0.802143 | 6.451768e-49 | -8.615850e-47 |
| Msa1000250 | Msa1460830 | 0.800825 | 1.201849e-48 | -8.615850e-47 |
| Msa1000250 | Msa1466540 | 0.838990 | 2.070517e-57 | -8.615850e-47 |
| Msa0239800 | Msa1000250 | 0.842451 | 2.564756e-58 | -8.615850e-47 |
| Msa0267370 | Msa1000250 | 0.813802 | 2.128664e-51 | -8.615850e-47 |
| Msa0269810 | Msa1000250 | 0.811465 | 6.908599e-51 | -8.615850e-47 |
| Msa0272730 | Msa1000250 | 0.810505 | 1.114886e-50 | -8.615850e-47 |
| Msa0274730 | Msa1000250 | 0.821369 | 4.189222e-53 | -8.615850e-47 |
| Msa0277820 | Msa1000250 | 0.821663 | 3.581664e-53 | -8.615850e-47 |
| Msa0285450 | Msa1000250 | 0.806479 | 8.064996e-50 | -8.615850e-47 |
| Msa0305190 | Msa1000250 | 0.827953 | 1.176784e-54 | -8.615850e-47 |
| Msa0306900 | Msa1000250 | 0.805777 | 1.133140e-49 | -8.615850e-47 |
| Msa0308460 | Msa1000250 | 0.808685 | 2.743482e-50 | -8.615850e-47 |
| Msa0311610 | Msa1000250 | 0.811890 | 5.582341e-51 | -8.615850e-47 |
| Msa0315530 | Msa1000250 | 0.822605 | 2.165773e-53 | -8.615850e-47 |
| Msa0317510 | Msa1000250 | 0.843816 | 1.110369e-58 | -8.615850e-47 |
| Msa0317730 | Msa1000250 | 0.814244 | 1.700869e-51 | -8.615850e-47 |
| Msa0328070 | Msa1000250 | 0.808256 | 3.386453e-50 | -8.615850e-47 |
| Msa0330340 | Msa1000250 | 0.816174 | 6.336247e-52 | -8.615850e-47 |
| Msa0336320 | Msa1000250 | 0.814644 | 1.386957e-51 | -8.615850e-47 |
| Msa0339250 | Msa1000250 | 0.802195 | 6.294174e-49 | -8.615850e-47 |
| Msa0340450 | Msa1000250 | 0.835052 | 2.099632e-56 | -8.615850e-47 |
| Msa0344690 | Msa1000250 | -0.815098 | 1.100410e-51 | -8.615850e-47 |
| Msa0345970 | Msa1000250 | 0.812181 | 4.824551e-51 | -8.615850e-47 |
| Msa0350320 | Msa1000250 | -0.822501 | 2.290265e-53 | -8.615850e-47 |
| Msa0357340 | Msa1000250 | 0.814921 | 1.204427e-51 | -8.615850e-47 |
| Msa0363790 | Msa1000250 | 0.823739 | 1.177619e-53 | -8.615850e-47 |
| Msa0484780 | Msa1000250 | 0.808867 | 2.507794e-50 | -8.615850e-47 |
| Msa0488560 | Msa1000250 | 0.816191 | 6.280107e-52 | -8.615850e-47 |
| Msa0495330 | Msa1000250 | 0.811204 | 7.870167e-51 | -8.615850e-47 |
| Msa0503060 | Msa1000250 | 0.801181 | 1.016499e-48 | -8.615850e-47 |
| Msa0511370 | Msa1000250 | 0.801569 | 8.465230e-49 | -8.615850e-47 |
| Msa0516170 | Msa1000250 | 0.812416 | 4.285750e-51 | -8.615850e-47 |
| Msa0521670 | Msa1000250 | 0.802108 | 6.558990e-49 | -8.615850e-47 |
| Msa0526070 | Msa1000250 | -0.817381 | 3.396334e-52 | -8.615850e-47 |
| Msa0529890 | Msa1000250 | 0.804552 | 2.044619e-49 | -8.615850e-47 |
| Msa0545700 | Msa1000250 | 0.806980 | 6.319525e-50 | -8.615850e-47 |
| Msa0548920 | Msa1000250 | 0.824660 | 7.155587e-54 | -8.615850e-47 |
| Msa0555020 | Msa1000250 | 0.807527 | 4.839552e-50 | -8.615850e-47 |
| Msa0585230 | Msa1000250 | 0.803186 | 3.931363e-49 | -8.615850e-47 |
| Msa0589280 | Msa1000250 | 0.806179 | 9.325378e-50 | -8.615850e-47 |
| Msa0598160 | Msa1000250 | 0.823363 | 1.442118e-53 | -8.615850e-47 |
| Msa0842650 | Msa1000250 | 0.802675 | 5.012866e-49 | -8.615850e-47 |
| Msa0844240 | Msa1000250 | 0.803183 | 3.936794e-49 | -8.615850e-47 |
| Msa0844450 | Msa1000250 | 0.813805 | 2.125339e-51 | -8.615850e-47 |
| Msa0844490 | Msa1000250 | 0.824263 | 8.872364e-54 | -8.615850e-47 |
| Msa0856910 | Msa1000250 | 0.801466 | 8.886548e-49 | -8.615850e-47 |
| Msa0857640 | Msa1000250 | 0.814994 | 1.159927e-51 | -8.615850e-47 |
| Msa0861090 | Msa1000250 | 0.804817 | 1.800198e-49 | -8.615850e-47 |
| Msa0862110 | Msa1000250 | 0.803159 | 3.981830e-49 | -8.615850e-47 |
| Msa0880950 | Msa1000250 | 0.818770 | 1.647643e-52 | -8.615850e-47 |
| Msa0887960 | Msa1000250 | 0.804465 | 2.132466e-49 | -8.615850e-47 |
| Msa0897330 | Msa1000250 | 0.815617 | 8.435594e-52 | -8.615850e-47 |
| Msa0900230 | Msa1000250 | 0.819174 | 1.333589e-52 | -8.615850e-47 |
| Msa0900620 | Msa1000250 | 0.802480 | 5.498257e-49 | -8.615850e-47 |
| Msa0907950 | Msa1000250 | 0.813825 | 2.104234e-51 | -8.615850e-47 |
| Msa0923010 | Msa1000250 | 0.807458 | 5.004769e-50 | -8.615850e-47 |
| Msa0924310 | Msa1000250 | 0.806145 | 9.480620e-50 | -8.615850e-47 |
| Msa0926890 | Msa1000250 | 0.889154 | 3.122337e-73 | -8.615850e-47 |
| Msa0927380 | Msa1000250 | 0.821480 | 3.949089e-53 | -8.615850e-47 |
| Msa0935910 | Msa1000250 | 0.828407 | 9.144314e-55 | -8.615850e-47 |
| Msa0939250 | Msa1000250 | 0.801131 | 1.040458e-48 | -8.615850e-47 |
| Msa0947660 | Msa1000250 | 0.803982 | 2.687422e-49 | -8.615850e-47 |
| Msa0953120 | Msa1000250 | 0.817645 | 2.961725e-52 | -8.615850e-47 |
| Msa0960740 | Msa1000250 | 0.816739 | 4.735624e-52 | -8.615850e-47 |
| Msa0964130 | Msa1000250 | 0.811700 | 6.141314e-51 | -8.615850e-47 |
| Msa0964900 | Msa1000250 | 0.801734 | 7.830388e-49 | -8.615850e-47 |
| Msa0965610 | Msa1000250 | 0.822712 | 2.045226e-53 | -8.615850e-47 |
| Msa0969520 | Msa1000250 | 0.837818 | 4.153998e-57 | -8.615850e-47 |
| Msa0973600 | Msa1000250 | 0.857185 | 1.939471e-62 | -8.615850e-47 |
| Msa0974080 | Msa1000250 | 0.827482 | 1.526847e-54 | -8.615850e-47 |
| Msa0976670 | Msa1000250 | 0.810873 | 9.283750e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1000250 | MtrunA17_Chr6g0486521 | 89.873 | 79 | 8 | 0 | 5 | 83 | 167 | 245 | 3.75e-33 | 120 |
| Msa1000250 | MtrunA17_Chr2g0299561 | 86.250 | 80 | 11 | 0 | 5 | 84 | 167 | 246 | 1.37e-31 | 116 |
| Msa1000250 | MtrunA17_Chr6g0486271 | 81.250 | 80 | 15 | 0 | 5 | 84 | 167 | 246 | 2.30e-29 | 109 |
| Msa1000250 | MtrunA17_Chr4g0041231 | 67.500 | 80 | 26 | 0 | 5 | 84 | 169 | 248 | 4.16e-28 | 106 |
| Msa1000250 | MtrunA17_Chr6g0486481 | 81.013 | 79 | 15 | 0 | 5 | 83 | 167 | 245 | 4.60e-28 | 106 |
| Msa1000250 | MtrunA17_Chr4g0041951 | 66.250 | 80 | 27 | 0 | 5 | 84 | 225 | 304 | 2.01e-27 | 104 |
| Msa1000250 | MtrunA17_Chr4g0041241 | 66.250 | 80 | 27 | 0 | 5 | 84 | 169 | 248 | 2.21e-27 | 104 |
| Msa1000250 | MtrunA17_Chr6g0486301 | 79.747 | 79 | 16 | 0 | 5 | 83 | 167 | 245 | 2.77e-26 | 101 |
| Msa1000250 | MtrunA17_Chr6g0486361 | 69.474 | 95 | 22 | 1 | 5 | 92 | 167 | 261 | 2.96e-26 | 101 |
| Msa1000250 | MtrunA17_Chr6g0486731 | 79.747 | 79 | 16 | 0 | 5 | 83 | 167 | 245 | 3.91e-26 | 100 |
| Msa1000250 | MtrunA17_Chr4g0041441 | 63.750 | 80 | 29 | 0 | 5 | 84 | 152 | 231 | 1.56e-25 | 99.0 |
| Msa1000250 | MtrunA17_Chr6g0485991 | 77.215 | 79 | 18 | 0 | 5 | 83 | 167 | 245 | 3.85e-25 | 97.8 |
| Msa1000250 | MtrunA17_Chr6g0486451 | 74.684 | 79 | 20 | 0 | 5 | 83 | 167 | 245 | 5.37e-25 | 95.5 |
| Msa1000250 | MtrunA17_Chr6g0486311 | 75.949 | 79 | 19 | 0 | 5 | 83 | 167 | 245 | 8.03e-25 | 97.1 |
| Msa1000250 | MtrunA17_Chr6g0486221 | 73.750 | 80 | 21 | 0 | 5 | 84 | 167 | 246 | 1.42e-24 | 96.3 |
| Msa1000250 | MtrunA17_Chr4g0041931 | 65.000 | 80 | 27 | 1 | 5 | 83 | 170 | 249 | 2.26e-23 | 92.8 |
| Msa1000250 | MtrunA17_Chr4g0041611 | 55.000 | 80 | 36 | 0 | 5 | 84 | 167 | 246 | 3.78e-23 | 92.4 |
| Msa1000250 | MtrunA17_Chr2g0319851 | 50.549 | 91 | 43 | 2 | 5 | 93 | 199 | 289 | 2.58e-20 | 84.3 |
| Msa1000250 | MtrunA17_Chr4g0042011 | 63.750 | 80 | 29 | 0 | 5 | 84 | 171 | 250 | 3.58e-20 | 84.0 |
| Msa1000250 | MtrunA17_Chr5g0394051 | 55.000 | 80 | 35 | 1 | 5 | 83 | 169 | 248 | 8.25e-19 | 79.7 |
| Msa1000250 | MtrunA17_Chr7g0243021 | 48.352 | 91 | 45 | 2 | 5 | 93 | 160 | 250 | 3.72e-18 | 77.4 |
| Msa1000250 | MtrunA17_Chr2g0319821 | 50.617 | 81 | 39 | 1 | 5 | 84 | 191 | 271 | 4.47e-18 | 77.8 |
| Msa1000250 | MtrunA17_Chr7g0242811 | 51.220 | 82 | 39 | 1 | 4 | 84 | 189 | 270 | 3.21e-17 | 75.5 |
| Msa1000250 | MtrunA17_Chr4g0041941 | 51.765 | 85 | 39 | 1 | 2 | 84 | 154 | 238 | 4.29e-16 | 72.0 |
| Msa1000250 | MtrunA17_Chr7g0242801 | 50.000 | 80 | 39 | 1 | 5 | 83 | 236 | 315 | 2.18e-15 | 70.1 |
| Msa1000250 | MtrunA17_Chr4g0009041 | 41.250 | 80 | 47 | 0 | 5 | 84 | 662 | 741 | 3.22e-15 | 69.7 |
| Msa1000250 | MtrunA17_Chr4g0018431 | 39.362 | 94 | 54 | 3 | 5 | 96 | 168 | 260 | 6.44e-15 | 68.9 |
| Msa1000250 | MtrunA17_Chr4g0009101 | 35.714 | 84 | 54 | 0 | 1 | 84 | 688 | 771 | 2.41e-14 | 67.0 |
| Msa1000250 | MtrunA17_Chr4g0009241 | 38.750 | 80 | 49 | 0 | 5 | 84 | 696 | 775 | 3.32e-14 | 66.6 |
| Msa1000250 | MtrunA17_Chr4g0009351 | 38.462 | 78 | 48 | 0 | 7 | 84 | 71 | 148 | 3.74e-14 | 66.6 |
| Msa1000250 | MtrunA17_Chr4g0009171 | 40.000 | 80 | 48 | 0 | 5 | 84 | 154 | 233 | 8.65e-14 | 65.5 |
| Msa1000250 | MtrunA17_Chr4g0009171 | 35.000 | 80 | 52 | 0 | 5 | 84 | 880 | 959 | 6.02e-12 | 60.5 |
| Msa1000250 | MtrunA17_Chr3g0118981 | 42.045 | 88 | 48 | 3 | 11 | 96 | 176 | 262 | 1.00e-13 | 65.5 |
| Msa1000250 | MtrunA17_Chr4g0041431 | 61.905 | 63 | 24 | 0 | 21 | 83 | 1 | 63 | 1.34e-13 | 65.1 |
| Msa1000250 | MtrunA17_Chr4g0009141 | 37.500 | 80 | 50 | 0 | 5 | 84 | 674 | 753 | 1.49e-13 | 65.1 |
| Msa1000250 | MtrunA17_Chr7g0256881 | 50.000 | 74 | 36 | 1 | 11 | 84 | 165 | 237 | 1.68e-13 | 64.7 |
| Msa1000250 | MtrunA17_Chr3g0119001 | 44.737 | 76 | 40 | 2 | 11 | 85 | 176 | 250 | 1.85e-13 | 64.7 |
| Msa1000250 | MtrunA17_Chr7g0242751 | 44.444 | 81 | 44 | 1 | 5 | 84 | 193 | 273 | 2.03e-13 | 64.7 |
| Msa1000250 | MtrunA17_Chr4g0010711 | 43.590 | 78 | 44 | 0 | 7 | 84 | 669 | 746 | 2.94e-13 | 63.9 |
| Msa1000250 | MtrunA17_Chr6g0455221 | 36.905 | 84 | 53 | 0 | 1 | 84 | 158 | 241 | 3.04e-13 | 63.9 |
| Msa1000250 | MtrunA17_Chr3g0102121 | 47.297 | 74 | 38 | 1 | 11 | 84 | 173 | 245 | 4.88e-13 | 63.5 |
| Msa1000250 | MtrunA17_Chr4g0005851 | 38.095 | 84 | 52 | 0 | 1 | 84 | 182 | 265 | 5.55e-13 | 63.2 |
| Msa1000250 | MtrunA17_Chr7g0234891 | 38.095 | 84 | 52 | 0 | 1 | 84 | 73 | 156 | 6.45e-13 | 63.2 |
| Msa1000250 | MtrunA17_Chr4g0005591 | 40.541 | 74 | 44 | 0 | 11 | 84 | 232 | 305 | 6.75e-13 | 63.2 |
| Msa1000250 | MtrunA17_Chr3g0102251 | 44.595 | 74 | 40 | 1 | 11 | 84 | 173 | 245 | 7.21e-13 | 62.4 |
| Msa1000250 | MtrunA17_Chr6g0454951 | 39.286 | 84 | 51 | 0 | 1 | 84 | 239 | 322 | 1.18e-12 | 62.4 |
| Msa1000250 | MtrunA17_Chr6g0454831 | 36.145 | 83 | 53 | 0 | 1 | 83 | 153 | 235 | 1.80e-12 | 62.0 |
| Msa1000250 | MtrunA17_Chr4g0009301 | 37.500 | 80 | 50 | 0 | 5 | 84 | 694 | 773 | 2.10e-12 | 61.6 |
| Msa1000250 | MtrunA17_Chr6g0455191 | 36.905 | 84 | 53 | 0 | 1 | 84 | 461 | 544 | 2.36e-12 | 61.6 |
| Msa1000250 | MtrunA17_Chr6g0454851 | 38.095 | 84 | 52 | 0 | 1 | 84 | 245 | 328 | 2.42e-12 | 61.6 |
| Msa1000250 | MtrunA17_Chr3g0102171 | 44.595 | 74 | 40 | 1 | 11 | 84 | 173 | 245 | 4.29e-12 | 60.8 |
| Msa1000250 | MtrunA17_Chr4g0009401 | 37.209 | 86 | 53 | 1 | 1 | 86 | 649 | 733 | 4.35e-12 | 60.8 |
| Msa1000250 | MtrunA17_Chr6g0454931 | 34.524 | 84 | 55 | 0 | 1 | 84 | 219 | 302 | 4.39e-12 | 60.8 |
| Msa1000250 | MtrunA17_Chr7g0255681 | 38.095 | 84 | 52 | 0 | 1 | 84 | 658 | 741 | 6.10e-12 | 60.5 |
| Msa1000250 | MtrunA17_Chr7g0255681 | 36.905 | 84 | 53 | 0 | 1 | 84 | 1160 | 1243 | 6.10e-12 | 60.5 |
| Msa1000250 | MtrunA17_Chr7g0255681 | 39.759 | 83 | 44 | 3 | 5 | 84 | 161 | 240 | 8.95e-11 | 57.0 |
| Msa1000250 | MtrunA17_Chr4g0005891 | 33.333 | 84 | 56 | 0 | 1 | 84 | 193 | 276 | 6.71e-12 | 60.1 |
| Msa1000250 | MtrunA17_Chr3g0102281 | 44.595 | 74 | 40 | 1 | 11 | 84 | 173 | 245 | 9.80e-12 | 59.7 |
| Msa1000250 | MtrunA17_Chr6g0455131 | 33.333 | 84 | 56 | 0 | 1 | 84 | 237 | 320 | 1.60e-11 | 59.3 |
| Msa1000250 | MtrunA17_Chr2g0298531 | 43.038 | 79 | 37 | 3 | 11 | 85 | 176 | 250 | 1.92e-11 | 58.9 |
| Msa1000250 | MtrunA17_Chr6g0478741 | 41.935 | 93 | 49 | 3 | 11 | 100 | 164 | 254 | 2.02e-11 | 58.9 |
| Msa1000250 | MtrunA17_Chr3g0114401 | 34.783 | 92 | 58 | 2 | 3 | 93 | 36 | 126 | 2.66e-11 | 58.5 |
| Msa1000250 | MtrunA17_Chr6g0455031 | 39.744 | 78 | 46 | 1 | 7 | 84 | 180 | 256 | 3.61e-11 | 58.2 |
| Msa1000250 | MtrunA17_Chr6g0454971 | 34.524 | 84 | 55 | 0 | 1 | 84 | 193 | 276 | 4.60e-11 | 57.8 |
| Msa1000250 | MtrunA17_Chr3g0102271 | 44.000 | 75 | 40 | 2 | 11 | 84 | 173 | 246 | 5.08e-11 | 57.8 |
| Msa1000250 | MtrunA17_Chr2g0298291 | 41.772 | 79 | 38 | 3 | 11 | 85 | 171 | 245 | 5.76e-11 | 57.4 |
| Msa1000250 | MtrunA17_Chr3g0085541 | 31.731 | 104 | 64 | 3 | 3 | 100 | 169 | 271 | 6.13e-11 | 57.4 |
| Msa1000250 | MtrunA17_Chr6g0480181 | 41.892 | 74 | 43 | 0 | 11 | 84 | 167 | 240 | 6.24e-11 | 57.4 |
| Msa1000250 | MtrunA17_Chr4g0005391 | 43.243 | 74 | 41 | 1 | 11 | 84 | 213 | 285 | 8.09e-11 | 57.0 |
| Msa1000250 | MtrunA17_Chr4g0010651 | 45.946 | 74 | 38 | 2 | 11 | 84 | 165 | 236 | 8.33e-11 | 57.0 |
| Msa1000250 | MtrunA17_Chr6g0454821 | 35.227 | 88 | 51 | 2 | 1 | 84 | 192 | 277 | 8.35e-11 | 57.0 |
| Msa1000250 | MtrunA17_Chr6g0455211 | 34.884 | 86 | 54 | 1 | 1 | 84 | 195 | 280 | 8.83e-11 | 57.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1000250 | AT5G17680.2 | 50.000 | 74 | 34 | 2 | 11 | 83 | 164 | 235 | 1.67e-13 | 65.1 |
| Msa1000250 | AT5G17680.1 | 50.000 | 74 | 34 | 2 | 11 | 83 | 163 | 234 | 1.69e-13 | 65.1 |
| Msa1000250 | AT5G48780.2 | 47.761 | 67 | 34 | 1 | 31 | 96 | 410 | 476 | 8.61e-13 | 63.2 |
| Msa1000250 | AT5G48780.1 | 47.761 | 67 | 34 | 1 | 31 | 96 | 440 | 506 | 8.91e-13 | 63.2 |
| Msa1000250 | AT5G11250.2 | 47.500 | 80 | 36 | 3 | 7 | 83 | 209 | 285 | 4.70e-12 | 61.2 |
| Msa1000250 | AT5G11250.3 | 47.500 | 80 | 36 | 3 | 7 | 83 | 127 | 203 | 4.78e-12 | 60.8 |
| Msa1000250 | AT5G11250.1 | 47.500 | 80 | 36 | 3 | 7 | 83 | 127 | 203 | 4.78e-12 | 60.8 |
| Msa1000250 | AT5G41540.1 | 40.244 | 82 | 48 | 1 | 2 | 83 | 153 | 233 | 6.99e-11 | 57.8 |
Find 17 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTTCGTGCTATAGGAATT+TGG | 0.201875 | 6_4:-82960936 | Msa1000250:CDS |
| GGCAAAATCTCTCATCAATT+TGG | 0.248276 | 6_4:-82960868 | Msa1000250:intron |
| ATTACAAAATCATTTACTTT+TGG | 0.264898 | 6_4:-82960971 | Msa1000250:CDS |
| ACCCTTGCTATGGATTTATA+TGG | 0.301145 | 6_4:-82960889 | Msa1000250:CDS |
| TGTTCGTGCTATAGGAATTT+GGG | 0.312148 | 6_4:-82960935 | Msa1000250:CDS |
| GTTGATGATGTTCGTGCTAT+AGG | 0.353920 | 6_4:-82960943 | Msa1000250:CDS |
| CTCGTTTCAAAAGACTTAGT+TGG | 0.389459 | 6_4:-82961015 | Msa1000250:CDS |
| TCGTTTCAAAAGACTTAGTT+GGG | 0.414001 | 6_4:-82961014 | Msa1000250:CDS |
| ACTTAGTTGGGATAAATTCT+CGG | 0.455916 | 6_4:-82961002 | Msa1000250:CDS |
| TGCCATATAAATCCATAGCA+AGG | 0.505034 | 6_4:+82960887 | None:intergenic |
| AGGGAAGACAACCCTTGCTA+TGG | 0.523012 | 6_4:-82960899 | Msa1000250:CDS |
| GTTCGTGCTATAGGAATTTG+GGG | 0.540882 | 6_4:-82960934 | Msa1000250:CDS |
| TGAACTTTCAGGCCACAAGC+TGG | 0.544410 | 6_4:-82961093 | Msa1000250:intron |
| GCCATATAAATCCATAGCAA+GGG | 0.549482 | 6_4:+82960888 | None:intergenic |
| CAAATCATACTTCAAACTCT+CGG | 0.557120 | 6_4:-82960775 | Msa1000250:CDS |
| AAAATTTGTAGATCACATGA+TGG | 0.586356 | 6_4:-82960817 | Msa1000250:intron |
| TTCGTGCTATAGGAATTTGG+GGG | 0.707526 | 6_4:-82960933 | Msa1000250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGTAATTTATAGTTTTTTT+TGG | - | chr6_4:82961368-82961387 | Msa1000250:intron | 10.0% |
| !!! | AAGTAATTTATAGTTTTTTT+TGG | - | chr6_4:82961368-82961387 | Msa1000250:intron | 10.0% |
| !!! | TTTTTTTGGTAGTAAATATA+AGG | - | chr6_4:82961382-82961401 | Msa1000250:intron | 15.0% |
| !!! | ATTACAAAATCATTTACTTT+TGG | - | chr6_4:82961676-82961695 | Msa1000250:intron | 15.0% |
| !!! | TTTTTTTGGTAGTAAATATA+AGG | - | chr6_4:82961382-82961401 | Msa1000250:intron | 15.0% |
| !!! | ATTACAAAATCATTTACTTT+TGG | - | chr6_4:82961676-82961695 | Msa1000250:intron | 15.0% |
| !!! | AGAAATGTTTTTTGTTTCAA+GGG | + | chr6_4:82960993-82961012 | None:intergenic | 20.0% |
| !! | CAAAAAACATTTCTGTATTT+CGG | - | chr6_4:82960999-82961018 | Msa1000250:CDS | 20.0% |
| !! | AAAAAACATTTCTGTATTTC+GGG | - | chr6_4:82961000-82961019 | Msa1000250:CDS | 20.0% |
| !!! | AGAAATGTTTTTTGTTTCAA+GGG | + | chr6_4:82960993-82961012 | None:intergenic | 20.0% |
| !! | CAAAAAACATTTCTGTATTT+CGG | - | chr6_4:82960999-82961018 | Msa1000250:CDS | 20.0% |
| !! | AAAAAACATTTCTGTATTTC+GGG | - | chr6_4:82961000-82961019 | Msa1000250:CDS | 20.0% |
| ! | TAAACACTTGTATATTCAGA+TGG | - | chr6_4:82960847-82960866 | Msa1000250:intron | 25.0% |
| !!! | CAGAAATGTTTTTTGTTTCA+AGG | + | chr6_4:82960994-82961013 | None:intergenic | 25.0% |
| !!! | AAATCATTTACTTTTGGACT+CGG | - | chr6_4:82961682-82961701 | Msa1000250:intron | 25.0% |
| ! | AAAATTTGTAGATCACATGA+TGG | - | chr6_4:82961830-82961849 | Msa1000250:intron | 25.0% |
| ! | TAAACACTTGTATATTCAGA+TGG | - | chr6_4:82960847-82960866 | Msa1000250:intron | 25.0% |
| !!! | CAGAAATGTTTTTTGTTTCA+AGG | + | chr6_4:82960994-82961013 | None:intergenic | 25.0% |
| !!! | AAATCATTTACTTTTGGACT+CGG | - | chr6_4:82961682-82961701 | Msa1000250:intron | 25.0% |
| ! | AAAATTTGTAGATCACATGA+TGG | - | chr6_4:82961830-82961849 | Msa1000250:intron | 25.0% |
| !!! | TGGCAACGTGAATATTTTTT+TGG | + | chr6_4:82960815-82960834 | None:intergenic | 30.0% |
| TATACAAGTGTTTAGAGGAT+TGG | + | chr6_4:82960841-82960860 | None:intergenic | 30.0% | |
| CTGAATATACAAGTGTTTAG+AGG | + | chr6_4:82960846-82960865 | None:intergenic | 30.0% | |
| GATAACACTAATCTTCAACA+GGG | - | chr6_4:82961022-82961041 | Msa1000250:CDS | 30.0% | |
| AAGATATGTGAATGCGTTAA+GGG | - | chr6_4:82961154-82961173 | Msa1000250:intron | 30.0% | |
| GGATCAACATCATAGAAAAT+AGG | + | chr6_4:82961199-82961218 | None:intergenic | 30.0% | |
| GTAAATATAAGGTGAAGAGA+TGG | - | chr6_4:82961393-82961412 | Msa1000250:intron | 30.0% | |
| !! | TTGCCTCTAGAACAAATATT+TGG | - | chr6_4:82961453-82961472 | Msa1000250:intron | 30.0% |
| ACTCCAAATATTTGTTCTAG+AGG | + | chr6_4:82961459-82961478 | None:intergenic | 30.0% | |
| ! | GAACAACTTTTTGAACTTTC+AGG | - | chr6_4:82961543-82961562 | Msa1000250:intron | 30.0% |
| TCGTTTCAAAAGACTTAGTT+GGG | - | chr6_4:82961633-82961652 | Msa1000250:intron | 30.0% | |
| ACTTAGTTGGGATAAATTCT+CGG | - | chr6_4:82961645-82961664 | Msa1000250:intron | 30.0% | |
| GTTTACATCATCAATGAAAC+AGG | + | chr6_4:82961810-82961829 | None:intergenic | 30.0% | |
| CAAATCATACTTCAAACTCT+CGG | - | chr6_4:82961872-82961891 | Msa1000250:intron | 30.0% | |
| !!! | TGGCAACGTGAATATTTTTT+TGG | + | chr6_4:82960815-82960834 | None:intergenic | 30.0% |
| TATACAAGTGTTTAGAGGAT+TGG | + | chr6_4:82960841-82960860 | None:intergenic | 30.0% | |
| CTGAATATACAAGTGTTTAG+AGG | + | chr6_4:82960846-82960865 | None:intergenic | 30.0% | |
| GATAACACTAATCTTCAACA+GGG | - | chr6_4:82961022-82961041 | Msa1000250:CDS | 30.0% | |
| AAGATATGTGAATGCGTTAA+GGG | - | chr6_4:82961154-82961173 | Msa1000250:intron | 30.0% | |
| GGATCAACATCATAGAAAAT+AGG | + | chr6_4:82961199-82961218 | None:intergenic | 30.0% | |
| GTAAATATAAGGTGAAGAGA+TGG | - | chr6_4:82961393-82961412 | Msa1000250:intron | 30.0% | |
| !! | TTGCCTCTAGAACAAATATT+TGG | - | chr6_4:82961453-82961472 | Msa1000250:intron | 30.0% |
| ACTCCAAATATTTGTTCTAG+AGG | + | chr6_4:82961459-82961478 | None:intergenic | 30.0% | |
| ! | GAACAACTTTTTGAACTTTC+AGG | - | chr6_4:82961543-82961562 | Msa1000250:intron | 30.0% |
| TCGTTTCAAAAGACTTAGTT+GGG | - | chr6_4:82961633-82961652 | Msa1000250:intron | 30.0% | |
| ACTTAGTTGGGATAAATTCT+CGG | - | chr6_4:82961645-82961664 | Msa1000250:intron | 30.0% | |
| GTTTACATCATCAATGAAAC+AGG | + | chr6_4:82961810-82961829 | None:intergenic | 30.0% | |
| CAAATCATACTTCAAACTCT+CGG | - | chr6_4:82961872-82961891 | Msa1000250:intron | 30.0% | |
| AGTGTTTAGAGGATTGGATA+TGG | + | chr6_4:82960835-82960854 | None:intergenic | 35.0% | |
| GGATAACACTAATCTTCAAC+AGG | - | chr6_4:82961021-82961040 | Msa1000250:CDS | 35.0% | |
| GAAGATATGTGAATGCGTTA+AGG | - | chr6_4:82961153-82961172 | Msa1000250:intron | 35.0% | |
| AGAAAGCAAAGTGGGATTTA+TGG | - | chr6_4:82961229-82961248 | Msa1000250:intron | 35.0% | |
| ! | TTTTTAATCTCTCCAGCTTG+TGG | + | chr6_4:82961569-82961588 | None:intergenic | 35.0% |
| CTCGTTTCAAAAGACTTAGT+TGG | - | chr6_4:82961632-82961651 | Msa1000250:intron | 35.0% | |
| ATGTTCGTGCTATAGGAATT+TGG | - | chr6_4:82961711-82961730 | Msa1000250:intron | 35.0% | |
| TGTTCGTGCTATAGGAATTT+GGG | - | chr6_4:82961712-82961731 | Msa1000250:intron | 35.0% | |
| ! | ACCCTTGCTATGGATTTATA+TGG | - | chr6_4:82961758-82961777 | Msa1000250:intron | 35.0% |
| GCCATATAAATCCATAGCAA+GGG | + | chr6_4:82961762-82961781 | None:intergenic | 35.0% | |
| TGCCATATAAATCCATAGCA+AGG | + | chr6_4:82961763-82961782 | None:intergenic | 35.0% | |
| GGCAAAATCTCTCATCAATT+TGG | - | chr6_4:82961779-82961798 | Msa1000250:intron | 35.0% | |
| !!! | GTATGATTTGCTTTTGTGCA+CGG | + | chr6_4:82961862-82961881 | None:intergenic | 35.0% |
| AGTGTTTAGAGGATTGGATA+TGG | + | chr6_4:82960835-82960854 | None:intergenic | 35.0% | |
| GGATAACACTAATCTTCAAC+AGG | - | chr6_4:82961021-82961040 | Msa1000250:CDS | 35.0% | |
| GAAGATATGTGAATGCGTTA+AGG | - | chr6_4:82961153-82961172 | Msa1000250:intron | 35.0% | |
| AGAAAGCAAAGTGGGATTTA+TGG | - | chr6_4:82961229-82961248 | Msa1000250:intron | 35.0% | |
| ! | TTTTTAATCTCTCCAGCTTG+TGG | + | chr6_4:82961569-82961588 | None:intergenic | 35.0% |
| CTCGTTTCAAAAGACTTAGT+TGG | - | chr6_4:82961632-82961651 | Msa1000250:intron | 35.0% | |
| ATGTTCGTGCTATAGGAATT+TGG | - | chr6_4:82961711-82961730 | Msa1000250:intron | 35.0% | |
| TGTTCGTGCTATAGGAATTT+GGG | - | chr6_4:82961712-82961731 | Msa1000250:intron | 35.0% | |
| ! | ACCCTTGCTATGGATTTATA+TGG | - | chr6_4:82961758-82961777 | Msa1000250:intron | 35.0% |
| GCCATATAAATCCATAGCAA+GGG | + | chr6_4:82961762-82961781 | None:intergenic | 35.0% | |
| TGCCATATAAATCCATAGCA+AGG | + | chr6_4:82961763-82961782 | None:intergenic | 35.0% | |
| GGCAAAATCTCTCATCAATT+TGG | - | chr6_4:82961779-82961798 | Msa1000250:intron | 35.0% | |
| !!! | GTATGATTTGCTTTTGTGCA+CGG | + | chr6_4:82961862-82961881 | None:intergenic | 35.0% |
| GATGTGTTTGTCACCTTTAG+AGG | - | chr6_4:82960926-82960945 | Msa1000250:CDS | 40.0% | |
| TTCTTTCAAGCACCATGTTG+AGG | + | chr6_4:82961128-82961147 | None:intergenic | 40.0% | |
| CTATGATGTTGATCCTTCTG+AGG | - | chr6_4:82961204-82961223 | Msa1000250:intron | 40.0% | |
| ATTCCAACAAGACTCTCACA+AGG | - | chr6_4:82961279-82961298 | Msa1000250:intron | 40.0% | |
| ! | ACTCTCACAAGGTGTCAATA+TGG | - | chr6_4:82961290-82961309 | Msa1000250:intron | 40.0% |
| ! | TCACAAGGTGTCAATATGGA+GGG | - | chr6_4:82961294-82961313 | Msa1000250:intron | 40.0% |
| !! | GTTGATGATGTTCGTGCTAT+AGG | - | chr6_4:82961704-82961723 | Msa1000250:intron | 40.0% |
| GTTCGTGCTATAGGAATTTG+GGG | - | chr6_4:82961713-82961732 | Msa1000250:intron | 40.0% | |
| TTCGTGCTATAGGAATTTGG+GGG | - | chr6_4:82961714-82961733 | Msa1000250:intron | 40.0% | |
| GATGTGTTTGTCACCTTTAG+AGG | - | chr6_4:82960926-82960945 | Msa1000250:CDS | 40.0% | |
| TTCTTTCAAGCACCATGTTG+AGG | + | chr6_4:82961128-82961147 | None:intergenic | 40.0% | |
| CTATGATGTTGATCCTTCTG+AGG | - | chr6_4:82961204-82961223 | Msa1000250:intron | 40.0% | |
| ATTCCAACAAGACTCTCACA+AGG | - | chr6_4:82961279-82961298 | Msa1000250:intron | 40.0% | |
| ! | ACTCTCACAAGGTGTCAATA+TGG | - | chr6_4:82961290-82961309 | Msa1000250:intron | 40.0% |
| ! | TCACAAGGTGTCAATATGGA+GGG | - | chr6_4:82961294-82961313 | Msa1000250:intron | 40.0% |
| !! | GTTGATGATGTTCGTGCTAT+AGG | - | chr6_4:82961704-82961723 | Msa1000250:intron | 40.0% |
| GTTCGTGCTATAGGAATTTG+GGG | - | chr6_4:82961713-82961732 | Msa1000250:intron | 40.0% | |
| TTCGTGCTATAGGAATTTGG+GGG | - | chr6_4:82961714-82961733 | Msa1000250:intron | 40.0% | |
| GCGAGTATCTTCACCTCTAA+AGG | + | chr6_4:82960942-82960961 | None:intergenic | 45.0% | |
| AGGATCTCAGGTTTACGTTG+CGG | - | chr6_4:82961081-82961100 | Msa1000250:CDS | 45.0% | |
| TTTACGTTGCGGTCTTCTCA+AGG | - | chr6_4:82961092-82961111 | Msa1000250:intron | 45.0% | |
| GGAACTATGCTTCCTCAACA+TGG | - | chr6_4:82961113-82961132 | Msa1000250:intron | 45.0% | |
| CTTTGCTTTCTCACCTCAGA+AGG | + | chr6_4:82961220-82961239 | None:intergenic | 45.0% | |
| ! | TCTGAGGTGAGAAAGCAAAG+TGG | - | chr6_4:82961220-82961239 | Msa1000250:intron | 45.0% |
| CTGAGGTGAGAAAGCAAAGT+GGG | - | chr6_4:82961221-82961240 | Msa1000250:intron | 45.0% | |
| ! | ACACCTTGTGAGAGTCTTGT+TGG | + | chr6_4:82961285-82961304 | None:intergenic | 45.0% |
| ! | CTCACAAGGTGTCAATATGG+AGG | - | chr6_4:82961293-82961312 | Msa1000250:intron | 45.0% |
| !! | AGGGAGGCTCTAGAAAAAGT+GGG | - | chr6_4:82961313-82961332 | Msa1000250:intron | 45.0% |
| !! | GAAAAAGTGGGGAGTATTGC+TGG | - | chr6_4:82961325-82961344 | Msa1000250:intron | 45.0% |
| TGCTATAGGAATTTGGGGGA+TGG | - | chr6_4:82961718-82961737 | Msa1000250:intron | 45.0% | |
| GCTATAGGAATTTGGGGGAT+GGG | - | chr6_4:82961719-82961738 | Msa1000250:intron | 45.0% | |
| !! | ATTTGCTTTTGTGCACGGAG+TGG | + | chr6_4:82961857-82961876 | None:intergenic | 45.0% |
| GCGAGTATCTTCACCTCTAA+AGG | + | chr6_4:82960942-82960961 | None:intergenic | 45.0% | |
| AGGATCTCAGGTTTACGTTG+CGG | - | chr6_4:82961081-82961100 | Msa1000250:CDS | 45.0% | |
| TTTACGTTGCGGTCTTCTCA+AGG | - | chr6_4:82961092-82961111 | Msa1000250:intron | 45.0% | |
| GGAACTATGCTTCCTCAACA+TGG | - | chr6_4:82961113-82961132 | Msa1000250:intron | 45.0% | |
| CTTTGCTTTCTCACCTCAGA+AGG | + | chr6_4:82961220-82961239 | None:intergenic | 45.0% | |
| ! | TCTGAGGTGAGAAAGCAAAG+TGG | - | chr6_4:82961220-82961239 | Msa1000250:intron | 45.0% |
| CTGAGGTGAGAAAGCAAAGT+GGG | - | chr6_4:82961221-82961240 | Msa1000250:intron | 45.0% | |
| ! | ACACCTTGTGAGAGTCTTGT+TGG | + | chr6_4:82961285-82961304 | None:intergenic | 45.0% |
| ! | CTCACAAGGTGTCAATATGG+AGG | - | chr6_4:82961293-82961312 | Msa1000250:intron | 45.0% |
| !! | AGGGAGGCTCTAGAAAAAGT+GGG | - | chr6_4:82961313-82961332 | Msa1000250:intron | 45.0% |
| !! | GAAAAAGTGGGGAGTATTGC+TGG | - | chr6_4:82961325-82961344 | Msa1000250:intron | 45.0% |
| TGCTATAGGAATTTGGGGGA+TGG | - | chr6_4:82961718-82961737 | Msa1000250:intron | 45.0% | |
| GCTATAGGAATTTGGGGGAT+GGG | - | chr6_4:82961719-82961738 | Msa1000250:intron | 45.0% | |
| !! | ATTTGCTTTTGTGCACGGAG+TGG | + | chr6_4:82961857-82961876 | None:intergenic | 45.0% |
| CTTCAACAGGGTGAGTCCAT+AGG | - | chr6_4:82961034-82961053 | Msa1000250:CDS | 50.0% | |
| TCGAAGAAGCTCAGGTCCTA+TGG | + | chr6_4:82961053-82961072 | None:intergenic | 50.0% | |
| TCGATTGCTCGAAGAAGCTC+AGG | + | chr6_4:82961061-82961080 | None:intergenic | 50.0% | |
| GAGCTTCTTCGAGCAATCGA+AGG | - | chr6_4:82961061-82961080 | Msa1000250:CDS | 50.0% | |
| TCGAGCAATCGAAGGATCTC+AGG | - | chr6_4:82961069-82961088 | Msa1000250:CDS | 50.0% | |
| ! | CAAGGTGTCAATATGGAGGG+AGG | - | chr6_4:82961297-82961316 | Msa1000250:intron | 50.0% |
| !! | GAGGGAGGCTCTAGAAAAAG+TGG | - | chr6_4:82961312-82961331 | Msa1000250:intron | 50.0% |
| !! | GGGAGGCTCTAGAAAAAGTG+GGG | - | chr6_4:82961314-82961333 | Msa1000250:intron | 50.0% |
| !! | AAGTGGGGAGTATTGCTGGT+TGG | - | chr6_4:82961329-82961348 | Msa1000250:intron | 50.0% |
| !! | AGTGGGGAGTATTGCTGGTT+GGG | - | chr6_4:82961330-82961349 | Msa1000250:intron | 50.0% |
| AAGAGATGGTGCACGAGTTC+AGG | - | chr6_4:82961407-82961426 | Msa1000250:intron | 50.0% | |
| TGAACTTTCAGGCCACAAGC+TGG | - | chr6_4:82961554-82961573 | Msa1000250:intron | 50.0% | |
| ATAGGAATTTGGGGGATGGG+AGG | - | chr6_4:82961722-82961741 | Msa1000250:intron | 50.0% | |
| ATTTGGGGGATGGGAGGAAT+AGG | - | chr6_4:82961728-82961747 | Msa1000250:intron | 50.0% | |
| TTTGGGGGATGGGAGGAATA+GGG | - | chr6_4:82961729-82961748 | Msa1000250:intron | 50.0% | |
| AGGGAAGACAACCCTTGCTA+TGG | - | chr6_4:82961748-82961767 | Msa1000250:intron | 50.0% | |
| CTTCAACAGGGTGAGTCCAT+AGG | - | chr6_4:82961034-82961053 | Msa1000250:CDS | 50.0% | |
| TCGAAGAAGCTCAGGTCCTA+TGG | + | chr6_4:82961053-82961072 | None:intergenic | 50.0% | |
| TCGATTGCTCGAAGAAGCTC+AGG | + | chr6_4:82961061-82961080 | None:intergenic | 50.0% | |
| GAGCTTCTTCGAGCAATCGA+AGG | - | chr6_4:82961061-82961080 | Msa1000250:CDS | 50.0% | |
| TCGAGCAATCGAAGGATCTC+AGG | - | chr6_4:82961069-82961088 | Msa1000250:CDS | 50.0% | |
| ! | CAAGGTGTCAATATGGAGGG+AGG | - | chr6_4:82961297-82961316 | Msa1000250:intron | 50.0% |
| !! | GAGGGAGGCTCTAGAAAAAG+TGG | - | chr6_4:82961312-82961331 | Msa1000250:intron | 50.0% |
| !! | GGGAGGCTCTAGAAAAAGTG+GGG | - | chr6_4:82961314-82961333 | Msa1000250:intron | 50.0% |
| !! | AAGTGGGGAGTATTGCTGGT+TGG | - | chr6_4:82961329-82961348 | Msa1000250:intron | 50.0% |
| !! | AGTGGGGAGTATTGCTGGTT+GGG | - | chr6_4:82961330-82961349 | Msa1000250:intron | 50.0% |
| AAGAGATGGTGCACGAGTTC+AGG | - | chr6_4:82961407-82961426 | Msa1000250:intron | 50.0% | |
| TGAACTTTCAGGCCACAAGC+TGG | - | chr6_4:82961554-82961573 | Msa1000250:intron | 50.0% | |
| ATAGGAATTTGGGGGATGGG+AGG | - | chr6_4:82961722-82961741 | Msa1000250:intron | 50.0% | |
| ATTTGGGGGATGGGAGGAAT+AGG | - | chr6_4:82961728-82961747 | Msa1000250:intron | 50.0% | |
| TTTGGGGGATGGGAGGAATA+GGG | - | chr6_4:82961729-82961748 | Msa1000250:intron | 50.0% | |
| AGGGAAGACAACCCTTGCTA+TGG | - | chr6_4:82961748-82961767 | Msa1000250:intron | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 82960770 | 82961899 | 82960770 | ID=Msa1000250;Name=Msa1000250 |
| chr6_4 | mRNA | 82960770 | 82961899 | 82960770 | ID=Msa1000250-mRNA-1;Parent=Msa1000250;Name=Msa1000250-mRNA-1;_AED=0.49;_eAED=0.51;_QI=0|0|0|1|0|0|3|0|102 |
| chr6_4 | exon | 82961886 | 82961899 | 82961886 | ID=Msa1000250-mRNA-1:exon:16031;Parent=Msa1000250-mRNA-1 |
| chr6_4 | exon | 82960869 | 82961104 | 82960869 | ID=Msa1000250-mRNA-1:exon:16030;Parent=Msa1000250-mRNA-1 |
| chr6_4 | exon | 82960770 | 82960828 | 82960770 | ID=Msa1000250-mRNA-1:exon:16029;Parent=Msa1000250-mRNA-1 |
| chr6_4 | CDS | 82961886 | 82961899 | 82961886 | ID=Msa1000250-mRNA-1:cds;Parent=Msa1000250-mRNA-1 |
| chr6_4 | CDS | 82960869 | 82961104 | 82960869 | ID=Msa1000250-mRNA-1:cds;Parent=Msa1000250-mRNA-1 |
| chr6_4 | CDS | 82960770 | 82960828 | 82960770 | ID=Msa1000250-mRNA-1:cds;Parent=Msa1000250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
