AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0902040

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0902040 MtrunA17_Chr6g0485441 95.436 745 19 3 1 738 1 737 0.0 1409
Msa0902040 MtrunA17_Chr1g0189431 84.106 151 19 1 1 146 1 151 8.51e-84 263
Msa0902040 MtrunA17_Chr1g0189451 78.667 150 26 2 588 737 1 144 7.65e-69 224
Msa0902040 MtrunA17_Chr4g0013741 22.671 569 366 15 53 576 96 635 1.17e-21 100
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0902040 AT2G40730.1 75.067 746 166 6 1 737 1 735 0.0 1080
Msa0902040 AT1G71410.1 20.824 461 305 9 27 446 70 511 3.23e-17 87.0
Msa0902040 AT1G71410.2 20.824 461 305 9 27 446 70 511 3.23e-17 87.0
Msa0902040 AT1G22870.4 21.382 463 304 8 25 446 68 511 1.81e-16 84.3
Msa0902040 AT1G22870.1 20.915 459 307 7 27 446 70 511 3.18e-16 83.6
Msa0902040 AT1G22870.3 21.637 342 241 4 128 446 9 346 9.90e-15 78.6

Find 248 sgRNAs with CRISPR-Local

Find 809 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTCAACCTTGGTGGAATTT+TGG 0.064969 6_1:-99762805 None:intergenic
TTAGCTTCTGCCCTTGAATT+TGG 0.180640 6_1:+99756101 Msa0902040:CDS
TTTGACTGCATTGTTGAAAA+TGG 0.188813 6_1:+99756142 Msa0902040:CDS
CTCCATGGGCCATTGATTCT+TGG 0.193517 6_1:+99753934 Msa0902040:CDS
TGAAGAAATGACAAAATATT+TGG 0.211866 6_1:-99752539 None:intergenic
TTAGGACCATTCAGTGATTT+AGG 0.212882 6_1:-99763476 None:intergenic
ATCCACCAACAACTTCTTTC+AGG 0.230681 6_1:-99752000 None:intergenic
TTATCTGAAAGTGGCATTAC+AGG 0.240664 6_1:-99752626 None:intergenic
GGAAGCTGCTCTGCTAAATT+TGG 0.248475 6_1:-99755951 None:intergenic
ACTTGATTATTCAGGCATTA+TGG 0.255952 6_1:+99758223 Msa0902040:intron
CCAAGTAAACTTGCATTTCC+TGG 0.262803 6_1:-99759776 None:intergenic
TGCCCTGGAAAGTGGAAATT+TGG 0.269268 6_1:-99763046 None:intergenic
CTGTCTCAAAGGACCTTGTC+TGG 0.286397 6_1:+99757540 Msa0902040:CDS
CCAGGAAATGCAAGTTTACT+TGG 0.288202 6_1:+99759776 Msa0902040:CDS
TCCATGGGCCATTGATTCTT+GGG 0.291032 6_1:+99753935 Msa0902040:CDS
GTTGTCGAATTCAAATTTAA+AGG 0.302494 6_1:-99762887 None:intergenic
AACAACGGTACTTGTGCTTA+TGG 0.307454 6_1:-99751918 None:intergenic
CTGAGTAGCCGCTGGTAATC+TGG 0.310087 6_1:-99755006 None:intergenic
CATTGTTGAAAATGGGTTCC+TGG 0.312737 6_1:+99756150 Msa0902040:CDS
TCTCAAGTCCATGTTAGTTC+TGG 0.320181 6_1:+99756593 Msa0902040:CDS
GTTTAGCTGAGCAGAGCTTT+TGG 0.323252 6_1:-99762999 None:intergenic
ACCCTTCCGCTTGGGGCTCT+TGG 0.325303 6_1:+99752068 Msa0902040:CDS
CTTTCTATTATAGACAAATA+TGG 0.328878 6_1:+99759712 Msa0902040:intron
AAGTAATTTGATATACTAGA+TGG 0.329733 6_1:-99763146 None:intergenic
GCCACTTTCAGATAAGATTC+AGG 0.330183 6_1:+99752634 Msa0902040:CDS
TGTTAGGGAGGAGGAGGGAT+TGG 0.331836 6_1:-99751855 None:intergenic
TAACCAAATTTCCACTTTCC+AGG 0.338376 6_1:+99763043 Msa0902040:three_prime_UTR
CTTAGCAGCTGGCCGAGGTC+GGG 0.342150 6_1:+99762973 Msa0902040:three_prime_UTR
AAACAGTGATGTTCGATCTA+AGG 0.342598 6_1:+99758973 Msa0902040:intron
CTTTGTCTATTGCAGGTTCA+TGG 0.345575 6_1:+99753342 Msa0902040:intron
TCAGATAAGATTCAGGAGTT+AGG 0.347337 6_1:+99752641 Msa0902040:CDS
TGTTGCTGAACGGAGATGTT+AGG 0.348628 6_1:-99751871 None:intergenic
CGAACCTTACCCTTCCGCTT+GGG 0.349078 6_1:+99752060 Msa0902040:CDS
AAAGAAGTTGTTGGTGGATC+TGG 0.357725 6_1:+99752004 Msa0902040:CDS
GATGGAAGTTTATCAATTCC+AGG 0.362464 6_1:+99759758 Msa0902040:CDS
AGCTCAAGCTGTTGATGAAC+AGG 0.365464 6_1:+99756385 Msa0902040:CDS
CCGACCTCGGCCAGCTGCTA+AGG 0.373064 6_1:-99762972 None:intergenic
CAGCTCCTGCGCCCACTACA+AGG 0.373259 6_1:+99762942 Msa0902040:three_prime_UTR
CTCCTACATCAACGGATGGC+TGG 0.376358 6_1:+99762173 Msa0902040:CDS
CTAATCTATGAGCTGTTCTC+TGG 0.378549 6_1:+99754778 Msa0902040:CDS
TCCTACATCAACGGATGGCT+GGG 0.381579 6_1:+99762174 Msa0902040:CDS
GTTTACCCTCATGTTGCTAC+TGG 0.382745 6_1:+99756534 Msa0902040:CDS
AATTTCATTGATGTCATAGT+TGG 0.383892 6_1:-99758264 None:intergenic
GGTAGACACAATACATTTCA+TGG 0.388081 6_1:+99755875 Msa0902040:CDS
GCCATTGATTCTTGGGGAAT+GGG 0.389642 6_1:+99753942 Msa0902040:CDS
TAAGGTTCGCCGATGTTGTA+TGG 0.391413 6_1:-99752046 None:intergenic
AGTAGCGAGTTACCTTGTTT+AGG 0.392460 6_1:+99751812 Msa0902040:five_prime_UTR
AAAGCATCTATCGAAGTTAC+AGG 0.393427 6_1:+99757572 Msa0902040:CDS
CTCCGAATTGTTCAATATGT+TGG 0.396831 6_1:-99756352 None:intergenic
CAGGGATGAATATTATGCTT+GGG 0.398038 6_1:+99753190 Msa0902040:intron
ACAAATATGGCAGAGACTAC+TGG 0.399143 6_1:+99759725 Msa0902040:CDS
ATTGTGAGTACAACAACATT+AGG 0.400000 6_1:-99758302 None:intergenic
TCCACTTTCCAGGGCACAAA+AGG 0.400483 6_1:+99763053 Msa0902040:three_prime_UTR
GCAAAGAGTTTAATTATTGT+TGG 0.401711 6_1:-99756296 None:intergenic
CTCCAACATATTGAACAATT+CGG 0.407638 6_1:+99756350 Msa0902040:CDS
GATCACTCACATAACTAAAC+AGG 0.417539 6_1:-99763516 None:intergenic
CAGCTAAACCGGACATCATC+AGG 0.418468 6_1:+99763013 Msa0902040:three_prime_UTR
CTTGCAACGCAACAAGGCTT+TGG 0.421475 6_1:+99763303 Msa0902040:three_prime_UTR
TCAAGGGCAGAAGCTAATAA+AGG 0.423515 6_1:-99756095 None:intergenic
TTCAACAATGCAGTCAAAGC+AGG 0.425072 6_1:-99756137 None:intergenic
CGGAGATGTTAGGGAGGAGG+AGG 0.428133 6_1:-99751861 None:intergenic
AAAGCTCTGCTCAGCTAAAC+CGG 0.431408 6_1:+99763002 Msa0902040:three_prime_UTR
TCGGCCAGCTGCTAAGGGCC+TGG 0.432686 6_1:-99762966 None:intergenic
GCATGGTGGTCAGTGAAATC+TGG 0.432933 6_1:-99762142 None:intergenic
GCTACATGCTCTTTGAGCCT+TGG 0.435472 6_1:+99763331 Msa0902040:three_prime_UTR
ATTTAAAGGTCTTTGATTGT+TGG 0.436494 6_1:-99762873 None:intergenic
TTAGCAGCTGGCCGAGGTCG+GGG 0.437675 6_1:+99762974 Msa0902040:three_prime_UTR
GATGTTCTATCAGAGTTTGA+TGG 0.438526 6_1:+99753426 Msa0902040:CDS
AGGGCCAGGCCCTTAGCAGC+TGG 0.442542 6_1:+99762962 Msa0902040:three_prime_UTR
CTGGCCCTTGTAGTGGGCGC+AGG 0.445959 6_1:-99762947 None:intergenic
GGCCATTGATTCTTGGGGAA+TGG 0.447612 6_1:+99753941 Msa0902040:CDS
GACACGGACAGCTCGATCAT+TGG 0.450921 6_1:-99756321 None:intergenic
CTAGAACTCACAGAAGCAAC+TGG 0.451326 6_1:-99761129 None:intergenic
TCTTCATCCCTGCTCAACCT+TGG 0.453545 6_1:-99762816 None:intergenic
CCTTAGCAGCTGGCCGAGGT+CGG 0.453563 6_1:+99762972 Msa0902040:three_prime_UTR
AAATTCCACCAAGGTTGAGC+AGG 0.454216 6_1:+99762808 Msa0902040:CDS
ATGAGCTCCTTGACTCTAAA+GGG 0.459180 6_1:+99761087 Msa0902040:CDS
TTTGAAAGATAGTGTTGAGA+AGG 0.467964 6_1:+99755908 Msa0902040:CDS
ATTGATGTCATAGTTGGAAC+TGG 0.469305 6_1:-99758258 None:intergenic
ATTCAGGAGTTAGGTCTTGA+AGG 0.470304 6_1:+99752650 Msa0902040:CDS
TGTTGTTGTCACGCCAACTT+TGG 0.470386 6_1:+99753383 Msa0902040:CDS
GCGAACCTTACCCTTCCGCT+TGG 0.471772 6_1:+99752059 Msa0902040:CDS
GTCGTCATCATGTTAAATAC+AGG 0.476108 6_1:+99763120 Msa0902040:three_prime_UTR
CATTAGAAGATGTTGGTGTA+AGG 0.476759 6_1:-99761155 None:intergenic
AAGGGCCTGGCCCTTGTAGT+GGG 0.480173 6_1:-99762953 None:intergenic
ATGTTCTATCAGAGTTTGAT+GGG 0.482527 6_1:+99753427 Msa0902040:CDS
GTTGTTGGTGGATCTGGAAC+TGG 0.482994 6_1:+99752010 Msa0902040:CDS
CTGCGCCCACTACAAGGGCC+AGG 0.483015 6_1:+99762948 Msa0902040:three_prime_UTR
TTGACTGCATTGTTGAAAAT+GGG 0.485246 6_1:+99756143 Msa0902040:CDS
CAAATAATAAATCACCTGTC+AGG 0.485509 6_1:-99758329 None:intergenic
GGTTCATGGCAATGTTTGCT+TGG 0.485983 6_1:+99753356 Msa0902040:intron
TCCTGAATCTTATCTGAAAG+TGG 0.486236 6_1:-99752635 None:intergenic
CAACCTGTTTCACAGACAAA+AGG 0.486565 6_1:+99762331 Msa0902040:CDS
CGACCTCGGCCAGCTGCTAA+GGG 0.488359 6_1:-99762971 None:intergenic
GTTGGCTTTGTTTCTTCAAG+TGG 0.490626 6_1:-99762262 None:intergenic
GTTGCTGAACGGAGATGTTA+GGG 0.491533 6_1:-99751870 None:intergenic
CATTTAGCTGCGGGTCGTAA+TGG 0.491773 6_1:+99752245 Msa0902040:CDS
TATGAGCTCCTTGACTCTAA+AGG 0.491816 6_1:+99761086 Msa0902040:CDS
TAAGGGCCTGGCCCTTGTAG+TGG 0.492890 6_1:-99762954 None:intergenic
CAGCAGCTGAACCAAATTCA+AGG 0.493179 6_1:-99756112 None:intergenic
TTGTCACGCCAACTTTGGAC+TGG 0.493752 6_1:+99753388 Msa0902040:CDS
ACATCCCTCCTGATGATGTC+CGG 0.494883 6_1:-99763021 None:intergenic
TCGTCAGATTGTGTTAAAGA+AGG 0.495220 6_1:+99755974 Msa0902040:CDS
GAGCCCCAAGCGGAAGGGTA+AGG 0.495780 6_1:-99752064 None:intergenic
GGGATGAAGATGAAGATTTG+TGG 0.496658 6_1:+99762829 Msa0902040:CDS
CAAATATGGCAGAGACTACT+GGG 0.496846 6_1:+99759726 Msa0902040:CDS
ATAATTGATTGTTACCTTGG+AGG 0.496898 6_1:-99752107 None:intergenic
GCAGGGATGAATATTATGCT+TGG 0.497318 6_1:+99753189 Msa0902040:intron
CAAGGTAACTCGCTACTTGA+GGG 0.498864 6_1:-99751806 None:intergenic
CAACTAATGATGATGATCCA+TGG 0.500400 6_1:+99762909 Msa0902040:three_prime_UTR
ACCCATTCCCCAAGAATCAA+TGG 0.501604 6_1:-99753943 None:intergenic
TCATCCCTGCTCAACCTTGG+TGG 0.502638 6_1:-99762813 None:intergenic
AAATACAACTATATCTTGCT+AGG 0.503221 6_1:+99757902 Msa0902040:CDS
TGTGAAACAGGTTGAACAAC+TGG 0.506071 6_1:-99762322 None:intergenic
TTTCCACCTGCTAGAGGAGC+AGG 0.506104 6_1:+99758112 Msa0902040:CDS
TCCGTTGATGTAGGAGATGT+AGG 0.506786 6_1:-99762166 None:intergenic
GGAGCTGCAATGGCAGCCCA+TGG 0.507768 6_1:-99762926 None:intergenic
CTAATACCTGCTCCTCTAGC+AGG 0.508317 6_1:-99758118 None:intergenic
GAACTCCTCAGCTGAAAGCC+AGG 0.510223 6_1:-99756168 None:intergenic
GAGAAGTCTGACCTTGGGAA+TGG 0.510862 6_1:-99754842 None:intergenic
GCTTGAATGTTAGTAAGAGC+TGG 0.513816 6_1:-99762286 None:intergenic
TGTTGGAGCGGGAGCTGCTA+TGG 0.515152 6_1:-99762856 None:intergenic
GAACCTTACCCTTCCGCTTG+GGG 0.515759 6_1:+99752061 Msa0902040:CDS
AAATTCCTGAAAGAAGTTGT+TGG 0.517801 6_1:+99751995 Msa0902040:CDS
TGGAGTTTCCAGTCCAAAGT+TGG 0.518208 6_1:-99753396 None:intergenic
TTCTATCCTAAATCACTGAA+TGG 0.519379 6_1:+99763470 Msa0902040:three_prime_UTR
CGGAGCTAGCAAAATCCGAC+TGG 0.519464 6_1:+99753892 Msa0902040:CDS
CAGGATGGACATTTAGCTGC+GGG 0.519763 6_1:+99752236 Msa0902040:CDS
GGATGAAGATGAAGATTTGT+GGG 0.520644 6_1:+99762830 Msa0902040:CDS
CCTACATCAACGGATGGCTG+GGG 0.521802 6_1:+99762175 Msa0902040:CDS
CCGTTGATGTAGGAGATGTA+GGG 0.523241 6_1:-99762165 None:intergenic
ATCATTAAGCATACCTGAGC+TGG 0.523577 6_1:-99761178 None:intergenic
GGAGATGTTAGGGAGGAGGA+GGG 0.526352 6_1:-99751860 None:intergenic
TACTCACAATTGATCCTGAC+AGG 0.528935 6_1:+99758315 Msa0902040:CDS
GACATCCTCTACGCAAATGC+TGG 0.529946 6_1:+99753458 Msa0902040:CDS
CGCAGCTAAATGTCCATCCT+GGG 0.530668 6_1:-99752234 None:intergenic
CCATGGGCCATTGATTCTTG+GGG 0.532546 6_1:+99753936 Msa0902040:CDS
CAGGAAATGCAAGTTTACTT+GGG 0.535552 6_1:+99759777 Msa0902040:CDS
GGGTTCCTGGCTTTCAGCTG+AGG 0.537536 6_1:+99756163 Msa0902040:CDS
TAAATGTCCATCCTGGGCAT+TGG 0.537721 6_1:-99752228 None:intergenic
AGTAATTTGATATACTAGAT+GGG 0.538706 6_1:-99763145 None:intergenic
TTCCTGAAAGAAGTTGTTGG+TGG 0.541191 6_1:+99751998 Msa0902040:CDS
GATGTATTTAATCTACGAGA+AGG 0.543062 6_1:-99755036 None:intergenic
TCAACAATGCAGTCAAAGCA+GGG 0.543212 6_1:-99756136 None:intergenic
ACACGGATAGGTGCTGTTGA+AGG 0.546664 6_1:-99762109 None:intergenic
AGCTGAGGAGTTCCGTGTCA+AGG 0.546667 6_1:+99756178 Msa0902040:CDS
AGGTCTTTGATTGTTGGAGC+GGG 0.548315 6_1:-99762867 None:intergenic
AACCAAATTTCCACTTTCCA+GGG 0.548385 6_1:+99763044 Msa0902040:three_prime_UTR
AGGCTTGCCCTTTAGAGTCA+AGG 0.549491 6_1:-99761094 None:intergenic
CATGTTAGTTCTGGCTCCGA+AGG 0.549605 6_1:+99756602 Msa0902040:CDS
GCCAAGAGCCCCAAGCGGAA+GGG 0.551717 6_1:-99752069 None:intergenic
AGTGGGCGCAGGAGCTGCAA+TGG 0.552530 6_1:-99762936 None:intergenic
ATTGTTCAATATGTTGGAGA+AGG 0.552863 6_1:-99756346 None:intergenic
CTGCTAAATTTGGAAGCTTG+CGG 0.553281 6_1:-99755941 None:intergenic
ATCATTATTTAAGAAGCTCA+CGG 0.554036 6_1:-99753234 None:intergenic
TGCTCCTCTAGCAGGTGGAA+AGG 0.555846 6_1:-99758110 None:intergenic
CTGTAACTTGCAACGCAACA+AGG 0.555900 6_1:+99763297 Msa0902040:three_prime_UTR
AAGGTTCGCCGATGTTGTAT+GGG 0.556759 6_1:-99752045 None:intergenic
CTGATAGAACATCAAAAGCA+TGG 0.560392 6_1:-99753416 None:intergenic
GCAACTGGAGCATGATCAGA+AGG 0.561662 6_1:-99761114 None:intergenic
AGCTCCTGCGCCCACTACAA+GGG 0.562278 6_1:+99762943 Msa0902040:three_prime_UTR
ATTGCAAGCTACTTAAACGA+AGG 0.562326 6_1:+99757929 Msa0902040:CDS
CTACATCAACGGATGGCTGG+GGG 0.562918 6_1:+99762176 Msa0902040:CDS
TTGCAAGCTACTTAAACGAA+GGG 0.564838 6_1:+99757930 Msa0902040:CDS
CATAATTGCAGCTGTCTCAA+AGG 0.565208 6_1:+99757529 Msa0902040:intron
GAACGGAGATGTTAGGGAGG+AGG 0.566271 6_1:-99751864 None:intergenic
ACAAGGTAACTCGCTACTTG+AGG 0.566700 6_1:-99751807 None:intergenic
ACATCTTCTAATGCCAGCTC+AGG 0.570241 6_1:+99761165 Msa0902040:CDS
CTTCGGAGCCAGAACTAACA+TGG 0.570780 6_1:-99756601 None:intergenic
CCCTACATCTCCTACATCAA+CGG 0.571117 6_1:+99762165 Msa0902040:CDS
CTAACATTCAAGCAGCTCAA+AGG 0.572637 6_1:+99762296 Msa0902040:CDS
TAATTAAGAAGTCTCCTCCA+TGG 0.572719 6_1:+99753919 Msa0902040:CDS
CTTCTTAATTACAGCCCAGT+CGG 0.573033 6_1:-99753907 None:intergenic
ATGTAGGAGATGTAGGGGCA+TGG 0.573984 6_1:-99762159 None:intergenic
ATGTTAGTAAGAGCTGGAGT+TGG 0.578383 6_1:-99762280 None:intergenic
ATTAGAAGATGTTGGTGTAA+GGG 0.578476 6_1:-99761154 None:intergenic
TGTCTCAAAGGACCTTGTCT+GGG 0.579463 6_1:+99757541 Msa0902040:CDS
CTGAAAATGACAAGGATGGG+TGG 0.581469 6_1:+99762227 Msa0902040:CDS
TCATCATCGCGGTACCTCCA+AGG 0.585096 6_1:+99752093 Msa0902040:CDS
TAATATTAAGCACGTCGCCA+AGG 0.585174 6_1:-99763348 None:intergenic
AAGTCTGACCTTGGGAATGG+AGG 0.585606 6_1:-99754839 None:intergenic
AACCTGAAAATGACAAGGAT+GGG 0.586228 6_1:+99762224 Msa0902040:CDS
ATTATCTGGAACCAATGCCC+AGG 0.586298 6_1:+99752217 Msa0902040:CDS
CCCCAGCCATCCGTTGATGT+AGG 0.587906 6_1:-99762175 None:intergenic
AACTAATGATGATGATCCAT+GGG 0.594078 6_1:+99762910 Msa0902040:three_prime_UTR
TCTGGAACCAATGCCCAGGA+TGG 0.595289 6_1:+99752221 Msa0902040:CDS
TTTCCATTCAGCAATATGCA+TGG 0.596821 6_1:+99753844 Msa0902040:intron
AATTAAGAAGTCTCCTCCAT+GGG 0.608185 6_1:+99753920 Msa0902040:CDS
AGGGATGAATATTATGCTTG+GGG 0.608296 6_1:+99753191 Msa0902040:intron
CCCCAAGAATCAATGGCCCA+TGG 0.613929 6_1:-99753936 None:intergenic
AATTCCACCAAGGTTGAGCA+GGG 0.616045 6_1:+99762809 Msa0902040:CDS
AATTATTAGTTACCTTGACA+CGG 0.618397 6_1:-99756190 None:intergenic
GATACCTTTCCACCTGCTAG+AGG 0.619442 6_1:+99758106 Msa0902040:CDS
AGCAGCTGAACCAAATTCAA+GGG 0.620239 6_1:-99756111 None:intergenic
AATTACCAGCATTTGCGTAG+AGG 0.620808 6_1:-99753463 None:intergenic
GAACCTGAAAATGACAAGGA+TGG 0.621311 6_1:+99762223 Msa0902040:CDS
TATGTTGGAGAAGGCTGACA+CGG 0.621891 6_1:-99756337 None:intergenic
ATACCTGCTCCTCTAGCAGG+TGG 0.623925 6_1:-99758115 None:intergenic
GGTGTGGAATTTACACGGAT+AGG 0.624750 6_1:-99762121 None:intergenic
ACGGACAGCTCGATCATTGG+AGG 0.625109 6_1:-99756318 None:intergenic
AAGGTCTTTGATTGTTGGAG+CGG 0.625529 6_1:-99762868 None:intergenic
ATTTAATCTACGAGAAGGCG+TGG 0.626292 6_1:-99755031 None:intergenic
CTCTGCTTCCAGATTACCAG+CGG 0.627746 6_1:+99754998 Msa0902040:CDS
GAGAAACCAGTAGCAACATG+AGG 0.635595 6_1:-99756540 None:intergenic
GCTAGAGAATGGAATTGATG+AGG 0.638647 6_1:+99762201 Msa0902040:CDS
TACTGATCAGTGTTGCTGAA+CGG 0.638888 6_1:-99751881 None:intergenic
TACATCAACGGATGGCTGGG+GGG 0.641241 6_1:+99762177 Msa0902040:CDS
CAACAATGCAGTCAAAGCAG+GGG 0.641805 6_1:-99756135 None:intergenic
TTCTTTAACACAATCTGACG+AGG 0.643601 6_1:-99755972 None:intergenic
GGCTCTTGGCTTCATCATCG+CGG 0.646469 6_1:+99752082 Msa0902040:CDS
TGAAAATGACAAGGATGGGT+GGG 0.647528 6_1:+99762228 Msa0902040:CDS
TGCAACACAATACAAATCAA+CGG 0.647901 6_1:+99753872 Msa0902040:CDS
ACATCTCCTACATCAACGGA+TGG 0.648116 6_1:+99762169 Msa0902040:CDS
TAACACTGCCTCCATTCCCA+AGG 0.650706 6_1:+99754831 Msa0902040:CDS
GGCAAAGCAACACTACGAGA+AGG 0.650955 6_1:+99759027 Msa0902040:CDS
CGTTGATGTAGGAGATGTAG+GGG 0.651141 6_1:-99762164 None:intergenic
CTTTAATAATGACCCAGACA+AGG 0.651418 6_1:-99757553 None:intergenic
GAAAGGTATCACGTAAAGCA+CGG 0.652734 6_1:-99758093 None:intergenic
AATCTGGTGTGGAATTTACA+CGG 0.654113 6_1:-99762126 None:intergenic
AGAAACCAGTAGCAACATGA+GGG 0.659703 6_1:-99756539 None:intergenic
CCAGGATGGACATTTAGCTG+CGG 0.659961 6_1:+99752235 Msa0902040:CDS
GTGGTCAGTGAAATCTGGTG+TGG 0.662798 6_1:-99762137 None:intergenic
GGAGCTAGCAAAATCCGACT+GGG 0.664324 6_1:+99753893 Msa0902040:CDS
ACATTCAAGCAGCTCAAAGG+CGG 0.669990 6_1:+99762299 Msa0902040:CDS
ACATCAATGAAATTGCCACT+CGG 0.673599 6_1:+99758273 Msa0902040:CDS
TCAAGTCACAGTCCTAAACA+AGG 0.674523 6_1:-99751824 None:intergenic
TGCAAGCTACTTAAACGAAG+GGG 0.676042 6_1:+99757931 Msa0902040:CDS
GAGCTGGCATTAGAAGATGT+TGG 0.677571 6_1:-99761162 None:intergenic
TAGGAGATGTAGGGGCATGG+TGG 0.678043 6_1:-99762156 None:intergenic
CGCGACCCAAAATTCCACCA+AGG 0.678187 6_1:+99762799 Msa0902040:CDS
AGAGATCTCCCATACAACAT+CGG 0.678627 6_1:+99752037 Msa0902040:CDS
CTAAACCGGACATCATCAGG+AGG 0.682079 6_1:+99763016 Msa0902040:three_prime_UTR
TTTGAAGTTGAGCAAAACAG+AGG 0.685379 6_1:+99754801 Msa0902040:CDS
TCAAAGCTTATAGAAAACAG+TGG 0.696006 6_1:+99755057 Msa0902040:CDS
TAAACCGGACATCATCAGGA+GGG 0.696522 6_1:+99763017 Msa0902040:three_prime_UTR
TTAGTGAGTAATTATAACAA+CGG 0.713811 6_1:-99751933 None:intergenic
TGTTGTATGGGAGATCTCTG+AGG 0.714551 6_1:-99752033 None:intergenic
TCCAGGGCACAAAAGGAACG+AGG 0.718433 6_1:+99763060 Msa0902040:three_prime_UTR
GCTGAACGGAGATGTTAGGG+AGG 0.720085 6_1:-99751867 None:intergenic
ATGAAGCCAAGAGCCCCAAG+CGG 0.722990 6_1:-99752074 None:intergenic
AACATTAGGAAGAATCCGAG+TGG 0.723039 6_1:-99758288 None:intergenic
GATGTCATAGTTGGAACTGG+TGG 0.723344 6_1:-99758255 None:intergenic
TAGGTCTTGAAGGTACACAA+AGG 0.723793 6_1:+99752660 Msa0902040:CDS
CAAGAATCAATGGCCCATGG+AGG 0.724818 6_1:-99753933 None:intergenic
TGAGGAACCTGAAAATGACA+AGG 0.725485 6_1:+99762219 Msa0902040:CDS
AAATATGGCAGAGACTACTG+GGG 0.748805 6_1:+99759727 Msa0902040:CDS
GATGAAGATGAAGATTTGTG+GGG 0.753066 6_1:+99762831 Msa0902040:CDS
AATATGGCAGAGACTACTGG+GGG 0.765761 6_1:+99759728 Msa0902040:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATTATAAATTTATAGTAAA+AGG - chr6_1:99753985-99754004 None:intergenic 10.0%
!! AATCAATTTACATTAAAATA+TGG - chr6_1:99755634-99755653 None:intergenic 10.0%
!!! AAATAAGATTTTGATTAAAA+AGG - chr6_1:99759288-99759307 None:intergenic 10.0%
!!! TTGATAATAAAACATTATTT+TGG + chr6_1:99759524-99759543 Msa0902040:intron 10.0%
!!! GTATTTTTTAAGTGAAAAAA+CGG + chr6_1:99752767-99752786 Msa0902040:intron 15.0%
!! AAATTTATAATGCATTATGA+TGG + chr6_1:99753993-99754012 Msa0902040:intron 15.0%
!! AGTAATAAATACAAAAACAA+AGG - chr6_1:99754877-99754896 None:intergenic 15.0%
!! ATTTCAATCAAAAATCAAAA+TGG - chr6_1:99757740-99757759 None:intergenic 15.0%
!!! ATTTTGATTTTTGATTGAAA+TGG + chr6_1:99757739-99757758 Msa0902040:intron 15.0%
!!! AGTCATATTAATGTTTATTT+TGG + chr6_1:99757762-99757781 Msa0902040:intron 15.0%
!!! GTCATATTAATGTTTATTTT+GGG + chr6_1:99757763-99757782 Msa0902040:intron 15.0%
!!! CAACAATTAATATTTTTAGA+AGG + chr6_1:99758403-99758422 Msa0902040:intron 15.0%
!!! TTTTTTTTAACTAGTATAAC+TGG + chr6_1:99758492-99758511 Msa0902040:intron 15.0%
!!! ACTTATTTTTACAAATCAAA+CGG + chr6_1:99758842-99758861 Msa0902040:intron 15.0%
!! TATAGAATAAAAATGTTTGA+CGG - chr6_1:99759487-99759506 None:intergenic 15.0%
!!! AATTAAATGAAGCATATTTT+AGG + chr6_1:99760094-99760113 Msa0902040:intron 15.0%
!!! TATTTATATTTTTGAGGAAT+TGG + chr6_1:99760482-99760501 Msa0902040:intron 15.0%
!! AAAAATAAATAACAACTTCT+GGG - chr6_1:99760706-99760725 None:intergenic 15.0%
!!! TTATTTTTGTTAGTTCTTAT+TGG + chr6_1:99760718-99760737 Msa0902040:intron 15.0%
!!! AAATGATATGTTTTGAAATT+TGG + chr6_1:99760844-99760863 Msa0902040:intron 15.0%
!! TATTTAATGAAGAAAAGTAA+AGG + chr6_1:99761883-99761902 Msa0902040:intron 15.0%
!!! ATACTATTTTGATTAAAGAA+AGG + chr6_1:99763421-99763440 Msa0902040:three_prime_UTR 15.0%
!! TTAGTGAGTAATTATAACAA+CGG - chr6_1:99751936-99751955 None:intergenic 20.0%
!! ATAATGAAAAAATTGAAACC+TGG - chr6_1:99752202-99752221 None:intergenic 20.0%
!!! GTTTCAATTTTTTCATTATC+TGG + chr6_1:99752203-99752222 Msa0902040:CDS 20.0%
!! TGAATTCAGTTTAATGTTAA+CGG + chr6_1:99752487-99752506 Msa0902040:intron 20.0%
!!! GGTTTTTATATTTCTTTTTC+AGG + chr6_1:99752508-99752527 Msa0902040:intron 20.0%
!!! TTATATTTCTTTTTCAGGTT+AGG + chr6_1:99752513-99752532 Msa0902040:intron 20.0%
!! TGAAGAAATGACAAAATATT+TGG - chr6_1:99752542-99752561 None:intergenic 20.0%
!!! ATCTTAGTTTCTAGAAAAAT+GGG - chr6_1:99753526-99753545 None:intergenic 20.0%
!!! TATCTTAGTTTCTAGAAAAA+TGG - chr6_1:99753527-99753546 None:intergenic 20.0%
!! AAAAAAAGATTAAAAACAGC+CGG - chr6_1:99754542-99754561 None:intergenic 20.0%
!! ATTACTGCATATAAAGATTA+AGG + chr6_1:99754891-99754910 Msa0902040:intron 20.0%
!! TTACTGCATATAAAGATTAA+GGG + chr6_1:99754892-99754911 Msa0902040:intron 20.0%
!! AGAATGAGCATAAATTTAAA+TGG - chr6_1:99754928-99754947 None:intergenic 20.0%
!!! AATTTTGACTTGTTATATCT+AGG + chr6_1:99755236-99755255 Msa0902040:intron 20.0%
!!! GATATTGGTTTTAGATTAAA+TGG + chr6_1:99755358-99755377 Msa0902040:intron 20.0%
!!! AAAGTATTATATGTGTATTG+AGG + chr6_1:99755571-99755590 Msa0902040:intron 20.0%
!! AAGTATTATATGTGTATTGA+GGG + chr6_1:99755572-99755591 Msa0902040:intron 20.0%
!!! ATTTTAGCTTTTCCATATTT+TGG + chr6_1:99755651-99755670 Msa0902040:intron 20.0%
!!! TTGATAGTACTCATTTTTTA+TGG + chr6_1:99755775-99755794 Msa0902040:intron 20.0%
!!! TAAACTGTTGATAAAATCAA+AGG - chr6_1:99756031-99756050 None:intergenic 20.0%
!! AATTAACGACATAATCAATT+GGG - chr6_1:99756055-99756074 None:intergenic 20.0%
!! AAATTAACGACATAATCAAT+TGG - chr6_1:99756056-99756075 None:intergenic 20.0%
!!! TTGATTATGTCGTTAATTTT+TGG + chr6_1:99756057-99756076 Msa0902040:intron 20.0%
!! ATCTCAAATATGTAAATTCA+AGG + chr6_1:99756830-99756849 Msa0902040:intron 20.0%
!!! ATTTTAGTGATGTTTATGTT+CGG + chr6_1:99756871-99756890 Msa0902040:intron 20.0%
!!! CAACTTTTGTATTACATTTT+AGG + chr6_1:99757068-99757087 Msa0902040:intron 20.0%
!! CTGCAATTATAAAAAAATCT+TGG - chr6_1:99757307-99757326 None:intergenic 20.0%
!! TCAAATAGGAGAAAAAATTT+AGG - chr6_1:99757459-99757478 None:intergenic 20.0%
!!! AGATTTACAATTTGTTTTGT+AGG + chr6_1:99757852-99757871 Msa0902040:intron 20.0%
!!! ATTTTGTAACTTGATTATTC+AGG + chr6_1:99758215-99758234 Msa0902040:intron 20.0%
!! TGTTGAAATGGTAAAAAATA+AGG + chr6_1:99758587-99758606 Msa0902040:intron 20.0%
!! GTTGAAATGGTAAAAAATAA+GGG + chr6_1:99758588-99758607 Msa0902040:intron 20.0%
!!! TGATTTGTAAAAATAAGTAC+TGG - chr6_1:99758840-99758859 None:intergenic 20.0%
!!! CTTATTTTTACAAATCAAAC+GGG + chr6_1:99758843-99758862 Msa0902040:intron 20.0%
!! GGATAAGAATGATAAATATT+TGG - chr6_1:99758892-99758911 None:intergenic 20.0%
!!! TATTGATCAATTTTTGCAAA+TGG + chr6_1:99759006-99759025 Msa0902040:CDS 20.0%
!! GTTTAATGCATATATATTTG+AGG + chr6_1:99759090-99759109 Msa0902040:intron 20.0%
!!! TGTTCTAAATTTTATAACAG+TGG + chr6_1:99759404-99759423 Msa0902040:intron 20.0%
!! CTTTCTATTATAGACAAATA+TGG + chr6_1:99759712-99759731 Msa0902040:intron 20.0%
!! AGATTAATTACATAAGATGA+TGG + chr6_1:99759894-99759913 Msa0902040:intron 20.0%
!!! TTTTTGTTTATATTCAAGAC+CGG - chr6_1:99759928-99759947 None:intergenic 20.0%
!!! AATTAACGAATTTTCTTAAG+TGG - chr6_1:99759972-99759991 None:intergenic 20.0%
!! ACTTGTTCTATATGAATAAA+AGG + chr6_1:99760050-99760069 Msa0902040:intron 20.0%
!! CTTGTTCTATATGAATAAAA+GGG + chr6_1:99760051-99760070 Msa0902040:intron 20.0%
!! CAAAAATAAATAACAACTTC+TGG - chr6_1:99760707-99760726 None:intergenic 20.0%
!! TAAGTGTAAATTATTGAACT+TGG - chr6_1:99761410-99761429 None:intergenic 20.0%
!!! GTTTACTTTTTCTTTGAATA+AGG + chr6_1:99761806-99761825 Msa0902040:intron 20.0%
!! TGGAGAAAATAATATATATC+TGG + chr6_1:99761836-99761855 Msa0902040:intron 20.0%
!! GGAGAAAATAATATATATCT+GGG + chr6_1:99761837-99761856 Msa0902040:intron 20.0%
!!! TTATTCAACTGTTAGTATTT+TGG + chr6_1:99762360-99762379 Msa0902040:intron 20.0%
!! TTGTCATTATCATTAATCAT+GGG - chr6_1:99762495-99762514 None:intergenic 20.0%
!! ATTGTCATTATCATTAATCA+TGG - chr6_1:99762496-99762515 None:intergenic 20.0%
!! AGTAATTTGATATACTAGAT+GGG - chr6_1:99763148-99763167 None:intergenic 20.0%
!! AAGTAATTTGATATACTAGA+TGG - chr6_1:99763149-99763168 None:intergenic 20.0%
!!! ACGTGCTTAATATTATTTTT+TGG + chr6_1:99763356-99763375 Msa0902040:three_prime_UTR 20.0%
!!! TTTGATTAAAGAAAGGTTTT+TGG + chr6_1:99763428-99763447 Msa0902040:three_prime_UTR 20.0%
!! TTGATAATTGATTGTTACCT+TGG - chr6_1:99752113-99752132 None:intergenic 25.0%
! CAATTTCAACACTAATTTGA+CGG + chr6_1:99752152-99752171 Msa0902040:intron 25.0%
!! ACAAAGCATTATTTGTTAGT+CGG + chr6_1:99752715-99752734 Msa0902040:intron 25.0%
!!! CTTATTTTTAGTTTCTCTAC+TGG + chr6_1:99752833-99752852 Msa0902040:intron 25.0%
! TTAATCTGTTTATCCAAACA+AGG + chr6_1:99753048-99753067 Msa0902040:intron 25.0%
! ATCATTATTTAAGAAGCTCA+CGG - chr6_1:99753237-99753256 None:intergenic 25.0%
!! TCTTAGTTTCTAGAAAAATG+GGG - chr6_1:99753525-99753544 None:intergenic 25.0%
! CAATAAACTTTCATCTAATG+TGG - chr6_1:99753589-99753608 None:intergenic 25.0%
! GTACAGGAAGAATATATATT+AGG - chr6_1:99753816-99753835 None:intergenic 25.0%
! AATGGAAAACATTAAAGTAC+AGG - chr6_1:99753832-99753851 None:intergenic 25.0%
!! AATGCATTATGATGGAAATA+TGG + chr6_1:99754001-99754020 Msa0902040:intron 25.0%
! AAATGCAAATAGATCTGAAA+TGG + chr6_1:99754107-99754126 Msa0902040:intron 25.0%
!! AATGCAAATAGATCTGAAAT+GGG + chr6_1:99754108-99754127 Msa0902040:intron 25.0%
!! TAGTTAGTTCTTGAATTCTA+GGG - chr6_1:99754348-99754367 None:intergenic 25.0%
! AATTCTCAATGTTCTAACAA+TGG + chr6_1:99754634-99754653 Msa0902040:intron 25.0%
! ATTCTCAATGTTCTAACAAT+GGG + chr6_1:99754635-99754654 Msa0902040:intron 25.0%
!! TATGAAATACGAATTTTCAG+TGG - chr6_1:99754752-99754771 None:intergenic 25.0%
! ACTGAAAATTCGTATTTCAT+AGG + chr6_1:99754751-99754770 Msa0902040:intron 25.0%
! TGAGACAGAAAAAAAAGATA+CGG - chr6_1:99754974-99754993 None:intergenic 25.0%
! GTTAGCTAATAAGCTATATA+GGG + chr6_1:99755183-99755202 Msa0902040:intron 25.0%
!! TATTTGAGTTCATGGATATT+AGG + chr6_1:99755259-99755278 Msa0902040:intron 25.0%
!! TTTTGACAGTATGATGATAT+TGG + chr6_1:99755343-99755362 Msa0902040:intron 25.0%
!!! AGATTAAATGGTTTTTGAGA+TGG + chr6_1:99755370-99755389 Msa0902040:intron 25.0%
!!! TAATTTGATAGCATTGATCA+CGG + chr6_1:99755539-99755558 Msa0902040:intron 25.0%
!!! TTATTATTTTTGCTTGCAAC+TGG - chr6_1:99755699-99755718 None:intergenic 25.0%
! TCAAAAGTTCAAAACAAGAA+AGG - chr6_1:99755759-99755778 None:intergenic 25.0%
!!! AGAGTATTTTCAGAATAAGT+TGG + chr6_1:99755854-99755873 Msa0902040:intron 25.0%
! AATTATTAGTTACCTTGACA+CGG - chr6_1:99756193-99756212 None:intergenic 25.0%
! GCAAAGAGTTTAATTATTGT+TGG - chr6_1:99756299-99756318 None:intergenic 25.0%
! AATATTAACAGATGTACCTT+CGG - chr6_1:99756621-99756640 None:intergenic 25.0%
! TGAAAAATGAGAGATGTTAT+TGG + chr6_1:99756677-99756696 Msa0902040:intron 25.0%
! AAGAACATTTCTGTATTAAC+GGG - chr6_1:99757381-99757400 None:intergenic 25.0%
! CAAGAACATTTCTGTATTAA+CGG - chr6_1:99757382-99757401 None:intergenic 25.0%
! ATAGGAGAAAAAATTTAGGA+GGG - chr6_1:99757455-99757474 None:intergenic 25.0%
! AATAGGAGAAAAAATTTAGG+AGG - chr6_1:99757456-99757475 None:intergenic 25.0%
! CTTGTAAAGATTCATCAAAT+AGG - chr6_1:99757473-99757492 None:intergenic 25.0%
! CTATTTGATGAATCTTTACA+AGG + chr6_1:99757471-99757490 Msa0902040:intron 25.0%
! AAATACAACTATATCTTGCT+AGG + chr6_1:99757902-99757921 Msa0902040:CDS 25.0%
! AATTTCATTGATGTCATAGT+TGG - chr6_1:99758267-99758286 None:intergenic 25.0%
! ATTCATCTACAGATAAGAAA+GGG - chr6_1:99758361-99758380 None:intergenic 25.0%
! AATTCATCTACAGATAAGAA+AGG - chr6_1:99758362-99758381 None:intergenic 25.0%
! TGACATGAATAACATAATCA+CGG - chr6_1:99758946-99758965 None:intergenic 25.0%
! TGATTATGTTATTCATGTCA+TGG + chr6_1:99758946-99758965 Msa0902040:intron 25.0%
!! TAACATGTGTTATTCTTTGA+CGG - chr6_1:99759235-99759254 None:intergenic 25.0%
! ATGACATGTAAACGATAAAT+AGG - chr6_1:99759462-99759481 None:intergenic 25.0%
! TATATGAATAAAAGGGTTAC+TGG + chr6_1:99760058-99760077 Msa0902040:intron 25.0%
! TTATACCAAACTTATTGACA+TGG - chr6_1:99760298-99760317 None:intergenic 25.0%
! ATAAGTTTGGTATAAAACTC+TGG + chr6_1:99760303-99760322 Msa0902040:intron 25.0%
! ATCAAGTAATCAAAATGTCT+CGG - chr6_1:99760350-99760369 None:intergenic 25.0%
!!! AATTGGTTTTAATAGACTAC+AGG + chr6_1:99760499-99760518 Msa0902040:intron 25.0%
! TAGTGGCTAAAAACATAAAT+GGG + chr6_1:99760647-99760666 Msa0902040:intron 25.0%
! TTATACACATTTGTATGTGT+AGG + chr6_1:99760761-99760780 Msa0902040:intron 25.0%
! AAACCTTACATTTCTATAGT+GGG - chr6_1:99760876-99760895 None:intergenic 25.0%
! TAAACCTTACATTTCTATAG+TGG - chr6_1:99760877-99760896 None:intergenic 25.0%
! GAAATGTAAGGTTTAAAGAA+AGG + chr6_1:99760882-99760901 Msa0902040:intron 25.0%
! TGAGTGTAAATTATTGAACT+TGG - chr6_1:99761433-99761452 None:intergenic 25.0%
!!! GTTTATATCACCTCTTTTTT+AGG + chr6_1:99762067-99762086 Msa0902040:intron 25.0%
!!! ATTAGTTTTCAAAGTCAGAT+TGG + chr6_1:99762421-99762440 Msa0902040:intron 25.0%
! AAAGTTCATTTATTAGGGAA+AGG - chr6_1:99762617-99762636 None:intergenic 25.0%
! AGCTCAAAGTTCATTTATTA+GGG - chr6_1:99762622-99762641 None:intergenic 25.0%
! AAGCTCAAAGTTCATTTATT+AGG - chr6_1:99762623-99762642 None:intergenic 25.0%
!! AATATTCCTTTTGCATTTGA+TGG - chr6_1:99762684-99762703 None:intergenic 25.0%
! AGGTACATGAATTAAGTAAT+GGG - chr6_1:99762712-99762731 None:intergenic 25.0%
! ATTTAAAGGTCTTTGATTGT+TGG - chr6_1:99762876-99762895 None:intergenic 25.0%
! GTTGTCGAATTCAAATTTAA+AGG - chr6_1:99762890-99762909 None:intergenic 25.0%
!!! ATTACTTTTGTGCTTTCTAT+TGG + chr6_1:99763162-99763181 Msa0902040:three_prime_UTR 25.0%
!! GTGCAACATTTTCATATTTT+AGG + chr6_1:99763380-99763399 Msa0902040:three_prime_UTR 25.0%
!!! GTTTTTGGTTAAATCTTGAA+TGG + chr6_1:99763443-99763462 Msa0902040:three_prime_UTR 25.0%
! TCAGATCAGAATTTTCATTG+CGG + chr6_1:99751956-99751975 Msa0902040:five_prime_UTR 30.0%
! CAGGAATTTGAACATTTTGT+TGG - chr6_1:99751984-99752003 None:intergenic 30.0%
AAATTCCTGAAAGAAGTTGT+TGG + chr6_1:99751995-99752014 Msa0902040:CDS 30.0%
ATAATTGATTGTTACCTTGG+AGG - chr6_1:99752110-99752129 None:intergenic 30.0%
! AATTTGACGGTGTTAATTTC+AGG + chr6_1:99752165-99752184 Msa0902040:intron 30.0%
ATTGAATGTAATCACATGTG+TGG - chr6_1:99752386-99752405 None:intergenic 30.0%
!! TCTGAGATTGAAACTTTTGA+TGG + chr6_1:99752566-99752585 Msa0902040:CDS 30.0%
ATGTATATTACAGAGCATGA+CGG + chr6_1:99753106-99753125 Msa0902040:intron 30.0%
!! CTTACTTTTATTCACCTTGT+GGG + chr6_1:99753163-99753182 Msa0902040:intron 30.0%
!! TTACTTTTATTCACCTTGTG+GGG + chr6_1:99753164-99753183 Msa0902040:intron 30.0%
GAGTATTCTTGAGCTAAATA+TGG + chr6_1:99753268-99753287 Msa0902040:intron 30.0%
TTACAAACTTTGTCTATTGC+AGG + chr6_1:99753335-99753354 Msa0902040:intron 30.0%
ATGTTCTATCAGAGTTTGAT+GGG + chr6_1:99753427-99753446 Msa0902040:CDS 30.0%
! TTAGTTTCTAGAAAAATGGG+GGG - chr6_1:99753523-99753542 None:intergenic 30.0%
! CTTAGTTTCTAGAAAAATGG+GGG - chr6_1:99753524-99753543 None:intergenic 30.0%
AGACAAAATCAAACTTAAGC+CGG - chr6_1:99753656-99753675 None:intergenic 30.0%
CAATGAAGTGAAACAAAACA+CGG - chr6_1:99753687-99753706 None:intergenic 30.0%
CATCATAAACCTCCATTTAA+GGG - chr6_1:99753742-99753761 None:intergenic 30.0%
TGCAACACAATACAAATCAA+CGG + chr6_1:99753872-99753891 Msa0902040:CDS 30.0%
GAAATATGGAATGAAGATCT+TGG + chr6_1:99754015-99754034 Msa0902040:intron 30.0%
AAATGCAAATAGATCCGAAA+TGG + chr6_1:99754157-99754176 Msa0902040:intron 30.0%
AATGCAAATAGATCCGAAAT+GGG + chr6_1:99754158-99754177 Msa0902040:intron 30.0%
! AGTTAGTTCTTGAATTCTAG+GGG - chr6_1:99754347-99754366 None:intergenic 30.0%
! GTAGTTAGTTCTTGAATTCT+AGG - chr6_1:99754349-99754368 None:intergenic 30.0%
GATGTATTTAATCTACGAGA+AGG - chr6_1:99755039-99755058 None:intergenic 30.0%
TCAAAGCTTATAGAAAACAG+TGG + chr6_1:99755057-99755076 Msa0902040:CDS 30.0%
! GGTTAGCTAATAAGCTATAT+AGG + chr6_1:99755182-99755201 Msa0902040:intron 30.0%
ATCCTCGTACATGAATATAA+TGG - chr6_1:99755210-99755229 None:intergenic 30.0%
! TATCTAGGTATTTGAGTTCA+TGG + chr6_1:99755251-99755270 Msa0902040:intron 30.0%
! GCACGATAATATTTGGTAAT+TGG + chr6_1:99755315-99755334 Msa0902040:intron 30.0%
TGTACAAATACAATCTCATC+CGG - chr6_1:99755513-99755532 None:intergenic 30.0%
TGAGATTGTATTTGTACACT+AGG + chr6_1:99755515-99755534 Msa0902040:intron 30.0%
GAGATTGTATTTGTACACTA+GGG + chr6_1:99755516-99755535 Msa0902040:intron 30.0%
!! TTAGCTTTTCCATATTTTGG+AGG + chr6_1:99755654-99755673 Msa0902040:intron 30.0%
!! TAGCTTTTCCATATTTTGGA+GGG + chr6_1:99755655-99755674 Msa0902040:intron 30.0%
!!! AAAGGCAAACTTTTAGAACA+TGG - chr6_1:99755741-99755760 None:intergenic 30.0%
GAATTCCAGAGAATTATATC+AGG - chr6_1:99755802-99755821 None:intergenic 30.0%
! TTTGAAAGATAGTGTTGAGA+AGG + chr6_1:99755908-99755927 Msa0902040:CDS 30.0%
TTTGACTGCATTGTTGAAAA+TGG + chr6_1:99756142-99756161 Msa0902040:CDS 30.0%
TTGACTGCATTGTTGAAAAT+GGG + chr6_1:99756143-99756162 Msa0902040:CDS 30.0%
AATTAGAGAGACATTTAAGC+TGG - chr6_1:99756222-99756241 None:intergenic 30.0%
GCTTAAATGTCTCTCTAATT+AGG + chr6_1:99756222-99756241 Msa0902040:intron 30.0%
TGAAATGCAATACATGAGAT+GGG - chr6_1:99756249-99756268 None:intergenic 30.0%
TTGAAATGCAATACATGAGA+TGG - chr6_1:99756250-99756269 None:intergenic 30.0%
ATTGTTCAATATGTTGGAGA+AGG - chr6_1:99756349-99756368 None:intergenic 30.0%
CTCCAACATATTGAACAATT+CGG + chr6_1:99756350-99756369 Msa0902040:CDS 30.0%
!!! TGATACATCTGCTTTTTTGA+GGG + chr6_1:99756563-99756582 Msa0902040:CDS 30.0%
TGATGTTTATGTTCGGATTT+GGG + chr6_1:99756878-99756897 Msa0902040:intron 30.0%
GTTAGATCTAACATGATCTA+GGG + chr6_1:99756912-99756931 Msa0902040:intron 30.0%
AGGGATTTCAATGATCTTAA+TGG + chr6_1:99756931-99756950 Msa0902040:intron 30.0%
AAGTGATCACAAAATACCAA+GGG - chr6_1:99757102-99757121 None:intergenic 30.0%
AAAGTGATCACAAAATACCA+AGG - chr6_1:99757103-99757122 None:intergenic 30.0%
ATCGAAATACTAACACCTAT+AGG - chr6_1:99757251-99757270 None:intergenic 30.0%
AGAACATTTCTGTATTAACG+GGG - chr6_1:99757380-99757399 None:intergenic 30.0%
TAGGAGAAAAAATTTAGGAG+GGG - chr6_1:99757454-99757473 None:intergenic 30.0%
ACTCACAACACATTAATCAT+TGG - chr6_1:99757613-99757632 None:intergenic 30.0%
GATTAATGTGTTGTGAGTAA+AGG + chr6_1:99757615-99757634 Msa0902040:intron 30.0%
! AGGCTAATTTATGCTGATTA+AGG + chr6_1:99757635-99757654 Msa0902040:intron 30.0%
! GTCAAATGATGGAAAATTTG+AGG - chr6_1:99757715-99757734 None:intergenic 30.0%
ACTTGATTATTCAGGCATTA+TGG + chr6_1:99758223-99758242 Msa0902040:intron 30.0%
ATTGTGAGTACAACAACATT+AGG - chr6_1:99758305-99758324 None:intergenic 30.0%
CAAATAATAAATCACCTGTC+AGG - chr6_1:99758332-99758351 None:intergenic 30.0%
TTCATCTACAGATAAGAAAG+GGG - chr6_1:99758360-99758379 None:intergenic 30.0%
AATGGTAAAAAATAAGGGAC+TGG + chr6_1:99758593-99758612 Msa0902040:intron 30.0%
!! TTTGATTTTATAACTGCTCC+TGG + chr6_1:99758641-99758660 Msa0902040:intron 30.0%
! TTGATTTTATAACTGCTCCT+GGG + chr6_1:99758642-99758661 Msa0902040:intron 30.0%
ATGTGTTGTACAATGTTTGA+GGG - chr6_1:99758771-99758790 None:intergenic 30.0%
TATGTGTTGTACAATGTTTG+AGG - chr6_1:99758772-99758791 None:intergenic 30.0%
! AACACTGGACAAACTTTTAA+GGG - chr6_1:99758807-99758826 None:intergenic 30.0%
ATAATCACGGCACAAAAAAT+GGG - chr6_1:99758933-99758952 None:intergenic 30.0%
TATTCCATGAAATCAGAAGT+TGG - chr6_1:99759153-99759172 None:intergenic 30.0%
ATAACAGTGGTGCATATATA+TGG + chr6_1:99759417-99759436 Msa0902040:intron 30.0%
TAACAGTGGTGCATATATAT+GGG + chr6_1:99759418-99759437 Msa0902040:intron 30.0%
AACACAACTAACAAGTAAAG+GGG - chr6_1:99759668-99759687 None:intergenic 30.0%
GAACACAACTAACAAGTAAA+GGG - chr6_1:99759669-99759688 None:intergenic 30.0%
!! AAGTTGGTTTACAGTTTTTG+TGG + chr6_1:99759801-99759820 Msa0902040:intron 30.0%
ATTCTCCAAATTGTTCTTCA+AGG + chr6_1:99760025-99760044 Msa0902040:intron 30.0%
TTCTCCAAATTGTTCTTCAA+GGG + chr6_1:99760026-99760045 Msa0902040:intron 30.0%
ATAAAAGGGTTACTGGAAAA+TGG + chr6_1:99760065-99760084 Msa0902040:intron 30.0%
GTTCAAATTCGCTTATAACT+TGG + chr6_1:99760145-99760164 Msa0902040:intron 30.0%
AGCAAAAAAGTCATGTTTAG+TGG - chr6_1:99760172-99760191 None:intergenic 30.0%
AAGACATACAACAATTGCTA+GGG + chr6_1:99760245-99760264 Msa0902040:intron 30.0%
! GGGTTTAAATTTTGTCAACT+TGG - chr6_1:99760329-99760348 None:intergenic 30.0%
TCAAGTAATCAAAATGTCTC+GGG - chr6_1:99760349-99760368 None:intergenic 30.0%
CTAGTGGCTAAAAACATAAA+TGG + chr6_1:99760646-99760665 Msa0902040:intron 30.0%
AGTGGCTAAAAACATAAATG+GGG + chr6_1:99760648-99760667 Msa0902040:intron 30.0%
TATATAGACAAGACAACTAC+AGG - chr6_1:99760913-99760932 None:intergenic 30.0%
! GTCTTGTCTATATAGTCTTA+TGG + chr6_1:99760919-99760938 Msa0902040:intron 30.0%
AGAGTTAAGTCAGAATCAAT+GGG - chr6_1:99761047-99761066 None:intergenic 30.0%
AAGAGTTAAGTCAGAATCAA+TGG - chr6_1:99761048-99761067 None:intergenic 30.0%
ATTAGAAGATGTTGGTGTAA+GGG - chr6_1:99761157-99761176 None:intergenic 30.0%
AGATCTCATAACATATTCAG+AGG - chr6_1:99761242-99761261 None:intergenic 30.0%
ACAAGACATTGATGTAAAAC+AGG - chr6_1:99761283-99761302 None:intergenic 30.0%
AAGTTATATGGATGATCAAG+TGG - chr6_1:99761364-99761383 None:intergenic 30.0%
AATTCCTCTTGTGATTTCAA+GGG - chr6_1:99761559-99761578 None:intergenic 30.0%
! TTTTGTCTTCTTCTTTGTTG+TGG + chr6_1:99761650-99761669 Msa0902040:intron 30.0%
! TTTGTCTTCTTCTTTGTTGT+GGG + chr6_1:99761651-99761670 Msa0902040:intron 30.0%
!!! CAAGGGACTTATGTTATTTT+GGG - chr6_1:99761689-99761708 None:intergenic 30.0%
GAAGTATACGCGAATAAAAA+TGG - chr6_1:99761714-99761733 None:intergenic 30.0%
TCTTTGAATAAGGTTTGTCT+TGG + chr6_1:99761816-99761835 Msa0902040:intron 30.0%
AACTAGAATGCCTAAAAAAG+AGG - chr6_1:99762080-99762099 None:intergenic 30.0%
!! TTCAACTGTTAGTATTTTGG+TGG + chr6_1:99762363-99762382 Msa0902040:intron 30.0%
TAATGACAATATCCTAGAAG+TGG + chr6_1:99762506-99762525 Msa0902040:intron 30.0%
AATGACAATATCCTAGAAGT+GGG + chr6_1:99762507-99762526 Msa0902040:intron 30.0%
AGTTCTGCACTTTAGTTATT+GGG + chr6_1:99762557-99762576 Msa0902040:intron 30.0%
CAGGTACATGAATTAAGTAA+TGG - chr6_1:99762713-99762732 None:intergenic 30.0%
CATTACTTAATTCATGTACC+TGG + chr6_1:99762711-99762730 Msa0902040:intron 30.0%
GTACATACAGATAATTAACC+AGG - chr6_1:99762732-99762751 None:intergenic 30.0%
! AACTAATGATGATGATCCAT+GGG + chr6_1:99762910-99762929 Msa0902040:three_prime_UTR 30.0%
!!! TGTAGTTTGCTTTTTTCTTC+TGG + chr6_1:99763095-99763114 Msa0902040:three_prime_UTR 30.0%
TTCTATCCTAAATCACTGAA+TGG + chr6_1:99763470-99763489 Msa0902040:three_prime_UTR 30.0%
! GAGATTGAAACTTTTGATGG+CGG + chr6_1:99752569-99752588 Msa0902040:CDS 35.0%
TTATCTGAAAGTGGCATTAC+AGG - chr6_1:99752629-99752648 None:intergenic 35.0%
TCCTGAATCTTATCTGAAAG+TGG - chr6_1:99752638-99752657 None:intergenic 35.0%
TCAGATAAGATTCAGGAGTT+AGG + chr6_1:99752641-99752660 Msa0902040:CDS 35.0%
!! AAGGTACACAAAGGTATTGA+TGG + chr6_1:99752669-99752688 Msa0902040:intron 35.0%
AATAAGCTGAAAACAGCTCA+AGG - chr6_1:99752914-99752933 None:intergenic 35.0%
CTTATTTCCATATGCTCTTC+AGG + chr6_1:99752928-99752947 Msa0902040:intron 35.0%
!! GCTTACTTTTATTCACCTTG+TGG + chr6_1:99753162-99753181 Msa0902040:intron 35.0%
CAGGGATGAATATTATGCTT+GGG + chr6_1:99753190-99753209 Msa0902040:intron 35.0%
AGGGATGAATATTATGCTTG+GGG + chr6_1:99753191-99753210 Msa0902040:intron 35.0%
CTGATAGAACATCAAAAGCA+TGG - chr6_1:99753419-99753438 None:intergenic 35.0%
GATGTTCTATCAGAGTTTGA+TGG + chr6_1:99753426-99753445 Msa0902040:CDS 35.0%
!! CAGAAGAGACAGCTTTAAAA+AGG - chr6_1:99753633-99753652 None:intergenic 35.0%
!!! CGTGTTTTGTTTCACTTCAT+TGG + chr6_1:99753685-99753704 Msa0902040:intron 35.0%
ATTGTGAATGCTCCCTTAAA+TGG + chr6_1:99753727-99753746 Msa0902040:intron 35.0%
CCATCATAAACCTCCATTTA+AGG - chr6_1:99753743-99753762 None:intergenic 35.0%
CCTTAAATGGAGGTTTATGA+TGG + chr6_1:99753740-99753759 Msa0902040:intron 35.0%
TTTCCATTCAGCAATATGCA+TGG + chr6_1:99753844-99753863 Msa0902040:intron 35.0%
TAATTAAGAAGTCTCCTCCA+TGG + chr6_1:99753919-99753938 Msa0902040:CDS 35.0%
AATTAAGAAGTCTCCTCCAT+GGG + chr6_1:99753920-99753939 Msa0902040:CDS 35.0%
!! TTTCACTTTTACCCTTTTGG+CGG + chr6_1:99754131-99754150 Msa0902040:intron 35.0%
GGTAAAAGTGAAACCCATTT+CGG - chr6_1:99754124-99754143 None:intergenic 35.0%
CAGATCTAGAAATAGATCTG+TGG + chr6_1:99754407-99754426 Msa0902040:intron 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG - chr6_1:99754451-99754470 None:intergenic 35.0%
TCTTGTGTAAAAACAGGGTA+AGG + chr6_1:99754450-99754469 Msa0902040:intron 35.0%
! TTTGAAGTTGAGCAAAACAG+AGG + chr6_1:99754801-99754820 Msa0902040:CDS 35.0%
CTGCATATAAAGATTAAGGG+AGG + chr6_1:99754895-99754914 Msa0902040:intron 35.0%
!!! TGTAGTTTTGCTGTTTTGTC+TGG + chr6_1:99755141-99755160 Msa0902040:intron 35.0%
! TGGAAGATTCATGTGCTTTT+TGG + chr6_1:99755161-99755180 Msa0902040:intron 35.0%
GTCCATTATATTCATGTACG+AGG + chr6_1:99755205-99755224 Msa0902040:intron 35.0%
GTTCATGGATATTAGGCTTT+AGG + chr6_1:99755266-99755285 Msa0902040:intron 35.0%
!! ATTAGGCTTTAGGATTGTCA+TGG + chr6_1:99755276-99755295 Msa0902040:intron 35.0%
!! TTAGGCTTTAGGATTGTCAT+GGG + chr6_1:99755277-99755296 Msa0902040:intron 35.0%
TAGTATGTACCTCTAACTTC+CGG + chr6_1:99755491-99755510 Msa0902040:intron 35.0%
GAAGATTTCCCTCCAAAATA+TGG - chr6_1:99755666-99755685 None:intergenic 35.0%
CATGGTAGAGATTGTTAAAG+TGG - chr6_1:99755723-99755742 None:intergenic 35.0%
ATGGTCCTGATATAATTCTC+TGG + chr6_1:99755794-99755813 Msa0902040:intron 35.0%
AATTACCAACAAACCCAAAC+AGG - chr6_1:99755827-99755846 None:intergenic 35.0%
GGTAGACACAATACATTTCA+TGG + chr6_1:99755875-99755894 Msa0902040:CDS 35.0%
TTCTTTAACACAATCTGACG+AGG - chr6_1:99755975-99755994 None:intergenic 35.0%
TCGTCAGATTGTGTTAAAGA+AGG + chr6_1:99755974-99755993 Msa0902040:CDS 35.0%
! TTAAAGAAGGTATGTCTCTC+TGG + chr6_1:99755987-99756006 Msa0902040:intron 35.0%
CTCCGAATTGTTCAATATGT+TGG - chr6_1:99756355-99756374 None:intergenic 35.0%
TGAAAAACAGTAGGGAAGTA+AGG - chr6_1:99756446-99756465 None:intergenic 35.0%
! TACAGCACTGAAAAACAGTA+GGG - chr6_1:99756454-99756473 None:intergenic 35.0%
! TTACAGCACTGAAAAACAGT+AGG - chr6_1:99756455-99756474 None:intergenic 35.0%
TACTGTTGATACTTGTGTTC+AGG + chr6_1:99756512-99756531 Msa0902040:intron 35.0%
!!! CTGATACATCTGCTTTTTTG+AGG + chr6_1:99756562-99756581 Msa0902040:CDS 35.0%
GTGATGTTTATGTTCGGATT+TGG + chr6_1:99756877-99756896 Msa0902040:intron 35.0%
GATGTTTATGTTCGGATTTG+GGG + chr6_1:99756879-99756898 Msa0902040:intron 35.0%
TGTTAGATCTAACCACATCT+TGG - chr6_1:99756905-99756924 None:intergenic 35.0%
GGTTAGATCTAACATGATCT+AGG + chr6_1:99756911-99756930 Msa0902040:intron 35.0%
TAGTAACCTACTATCTTGTC+TGG + chr6_1:99756980-99756999 Msa0902040:intron 35.0%
ACTTAACCAGACAAGATAGT+AGG - chr6_1:99756989-99757008 None:intergenic 35.0%
TATCTTGTCTGGTTAAGTAG+AGG + chr6_1:99756991-99757010 Msa0902040:intron 35.0%
AGTGATCACAAAATACCAAG+GGG - chr6_1:99757101-99757120 None:intergenic 35.0%
CTTAAGCTAATCCAAGTCTT+GGG + chr6_1:99757127-99757146 Msa0902040:intron 35.0%
ATGAACGGGAAAAAGATGTT+TGG - chr6_1:99757180-99757199 None:intergenic 35.0%
ATGATACGAACATTCCATTG+AGG - chr6_1:99757333-99757352 None:intergenic 35.0%
TTAACGGGGTTCACTAATTT+AGG - chr6_1:99757366-99757385 None:intergenic 35.0%
CTTTAATAATGACCCAGACA+AGG - chr6_1:99757556-99757575 None:intergenic 35.0%
! AAAGCATCTATCGAAGTTAC+AGG + chr6_1:99757572-99757591 Msa0902040:CDS 35.0%
TGAGGAGTCATAAGTGTTAA+CGG - chr6_1:99757697-99757716 None:intergenic 35.0%
TCAAAATGGCAGTCAAATGA+TGG - chr6_1:99757726-99757745 None:intergenic 35.0%
ATTGCAAGCTACTTAAACGA+AGG + chr6_1:99757929-99757948 Msa0902040:CDS 35.0%
TTGCAAGCTACTTAAACGAA+GGG + chr6_1:99757930-99757949 Msa0902040:CDS 35.0%
ATTGATGTCATAGTTGGAAC+TGG - chr6_1:99758261-99758280 None:intergenic 35.0%
ACATCAATGAAATTGCCACT+CGG + chr6_1:99758273-99758292 Msa0902040:CDS 35.0%
TCATCTACAGATAAGAAAGG+GGG - chr6_1:99758359-99758378 None:intergenic 35.0%
TAAAAAATAAGGGACTGGAC+AGG + chr6_1:99758598-99758617 Msa0902040:intron 35.0%
TGTGACAAAAAGTTGTCATG+TGG - chr6_1:99758717-99758736 None:intergenic 35.0%
TACAATGTTTGAGGGACAAA+AGG - chr6_1:99758763-99758782 None:intergenic 35.0%
! CAACACTGGACAAACTTTTA+AGG - chr6_1:99758808-99758827 None:intergenic 35.0%
GGGAAATACTCAAAGATACA+AGG - chr6_1:99758913-99758932 None:intergenic 35.0%
CATAATCACGGCACAAAAAA+TGG - chr6_1:99758934-99758953 None:intergenic 35.0%
AAACAGTGATGTTCGATCTA+AGG + chr6_1:99758973-99758992 Msa0902040:intron 35.0%
! ACTACGAGAAGGTATAATGT+GGG + chr6_1:99759038-99759057 Msa0902040:intron 35.0%
! GTATAATGTGGGGTTCTTTT+TGG + chr6_1:99759049-99759068 Msa0902040:intron 35.0%
AATGCCAACTTCTGATTTCA+TGG + chr6_1:99759146-99759165 Msa0902040:intron 35.0%
GGAACACAACTAACAAGTAA+AGG - chr6_1:99759670-99759689 None:intergenic 35.0%
GATGGAAGTTTATCAATTCC+AGG + chr6_1:99759758-99759777 Msa0902040:CDS 35.0%
CAGGAAATGCAAGTTTACTT+GGG + chr6_1:99759777-99759796 Msa0902040:CDS 35.0%
TGTTTATATTCAAGACCGGA+GGG - chr6_1:99759924-99759943 None:intergenic 35.0%
TTGTTTATATTCAAGACCGG+AGG - chr6_1:99759925-99759944 None:intergenic 35.0%
! ACGAATTTTCTTAAGTGGAG+TGG - chr6_1:99759967-99759986 None:intergenic 35.0%
AGTTCCCTTGAAGAACAATT+TGG - chr6_1:99760033-99760052 None:intergenic 35.0%
TTGCTATAGTTGAGAACAGA+AGG + chr6_1:99760187-99760206 Msa0902040:intron 35.0%
GAAGACATACAACAATTGCT+AGG + chr6_1:99760244-99760263 Msa0902040:intron 35.0%
AGACATACAACAATTGCTAG+GGG + chr6_1:99760246-99760265 Msa0902040:intron 35.0%
ATTGCTAGGGGTTTCAAAAT+CGG + chr6_1:99760258-99760277 Msa0902040:intron 35.0%
TTTAATAGACTACAGGTTCG+TGG + chr6_1:99760506-99760525 Msa0902040:intron 35.0%
TTAATAGACTACAGGTTCGT+GGG + chr6_1:99760507-99760526 Msa0902040:intron 35.0%
AAAAAGTCATTGACCAGTCA+TGG + chr6_1:99760604-99760623 Msa0902040:intron 35.0%
AAAAGTCATTGACCAGTCAT+GGG + chr6_1:99760605-99760624 Msa0902040:intron 35.0%
GTGGCTAAAAACATAAATGG+GGG + chr6_1:99760649-99760668 Msa0902040:intron 35.0%
GAACATTGTTGAATACAGAG+TGG + chr6_1:99760671-99760690 Msa0902040:intron 35.0%
! TGTATGTGTAGGTATTGTGA+TGG + chr6_1:99760772-99760791 Msa0902040:intron 35.0%
ATGCCCACTATAGAAATGTA+AGG + chr6_1:99760870-99760889 Msa0902040:intron 35.0%
!! CAGAATCAATGGGTTAAATG+TGG - chr6_1:99761037-99761056 None:intergenic 35.0%
CATTAGAAGATGTTGGTGTA+AGG - chr6_1:99761158-99761177 None:intergenic 35.0%
ATGTAAAACAGGCCAAAATG+GGG - chr6_1:99761272-99761291 None:intergenic 35.0%
GATGTAAAACAGGCCAAAAT+GGG - chr6_1:99761273-99761292 None:intergenic 35.0%
TGATGTAAAACAGGCCAAAA+TGG - chr6_1:99761274-99761293 None:intergenic 35.0%
! CAGTAGCGTCTAAAGTTATA+TGG - chr6_1:99761376-99761395 None:intergenic 35.0%
CAATTCCTCTTGTGATTTCA+AGG - chr6_1:99761560-99761579 None:intergenic 35.0%
! TTGTCTTCTTCTTTGTTGTG+GGG + chr6_1:99761652-99761671 Msa0902040:intron 35.0%
!! CCAAGGGACTTATGTTATTT+TGG - chr6_1:99761690-99761709 None:intergenic 35.0%
CCAAAATAACATAAGTCCCT+TGG + chr6_1:99761687-99761706 Msa0902040:intron 35.0%
GATCTTTGCTTAAACATGGA+GGG - chr6_1:99761736-99761755 None:intergenic 35.0%
AGATCTTTGCTTAAACATGG+AGG - chr6_1:99761737-99761756 None:intergenic 35.0%
GAGAGATCTTTGCTTAAACA+TGG - chr6_1:99761740-99761759 None:intergenic 35.0%
GAAGAAAACTGAGAAACTGA+GGG + chr6_1:99761905-99761924 Msa0902040:intron 35.0%
ACTCGAAGCAGAACAAATTA+TGG - chr6_1:99762027-99762046 None:intergenic 35.0%
AATCTGGTGTGGAATTTACA+CGG - chr6_1:99762129-99762148 None:intergenic 35.0%
AACCTGAAAATGACAAGGAT+GGG + chr6_1:99762224-99762243 Msa0902040:CDS 35.0%
! ATACCTTTTGTCTGTGAAAC+AGG - chr6_1:99762337-99762356 None:intergenic 35.0%
GATTAGCAGACATGAAAATG+AGG - chr6_1:99762395-99762414 None:intergenic 35.0%
CAGTTCTGCACTTTAGTTAT+TGG + chr6_1:99762556-99762575 Msa0902040:intron 35.0%
GTTCTGCACTTTAGTTATTG+GGG + chr6_1:99762558-99762577 Msa0902040:intron 35.0%
TTATTAGGGAAAGGTGACTA+AGG - chr6_1:99762608-99762627 None:intergenic 35.0%
! TTGAGCTTTTGCTTTATGCT+AGG + chr6_1:99762635-99762654 Msa0902040:intron 35.0%
! CTTTTGCTTTATGCTAGGAT+TGG + chr6_1:99762640-99762659 Msa0902040:intron 35.0%
ACAGTTCCATCAAATGCAAA+AGG + chr6_1:99762675-99762694 Msa0902040:intron 35.0%
TGTACTCATGCATCAATTGA+TGG + chr6_1:99762747-99762766 Msa0902040:intron 35.0%
GGATGAAGATGAAGATTTGT+GGG + chr6_1:99762830-99762849 Msa0902040:CDS 35.0%
GATGAAGATGAAGATTTGTG+GGG + chr6_1:99762831-99762850 Msa0902040:CDS 35.0%
! CAACTAATGATGATGATCCA+TGG + chr6_1:99762909-99762928 Msa0902040:three_prime_UTR 35.0%
TAACCAAATTTCCACTTTCC+AGG + chr6_1:99763043-99763062 Msa0902040:three_prime_UTR 35.0%
AACCAAATTTCCACTTTCCA+GGG + chr6_1:99763044-99763063 Msa0902040:three_prime_UTR 35.0%
!!! AGTTTGCTTTTTTCTTCTGG+TGG + chr6_1:99763098-99763117 Msa0902040:three_prime_UTR 35.0%
GTCGTCATCATGTTAAATAC+AGG + chr6_1:99763120-99763139 Msa0902040:three_prime_UTR 35.0%
TTAGGACCATTCAGTGATTT+AGG - chr6_1:99763479-99763498 None:intergenic 35.0%
GATCACTCACATAACTAAAC+AGG - chr6_1:99763519-99763538 None:intergenic 35.0%
! AGTAGCGAGTTACCTTGTTT+AGG + chr6_1:99751812-99751831 Msa0902040:five_prime_UTR 40.0%
TCAAGTCACAGTCCTAAACA+AGG - chr6_1:99751827-99751846 None:intergenic 40.0%
! TACTGATCAGTGTTGCTGAA+CGG - chr6_1:99751884-99751903 None:intergenic 40.0%
AACAACGGTACTTGTGCTTA+TGG - chr6_1:99751921-99751940 None:intergenic 40.0%
TTCCTGAAAGAAGTTGTTGG+TGG + chr6_1:99751998-99752017 Msa0902040:CDS 40.0%
ATCCACCAACAACTTCTTTC+AGG - chr6_1:99752003-99752022 None:intergenic 40.0%
! AAAGAAGTTGTTGGTGGATC+TGG + chr6_1:99752004-99752023 Msa0902040:CDS 40.0%
AGAGATCTCCCATACAACAT+CGG + chr6_1:99752037-99752056 Msa0902040:CDS 40.0%
! CGGTGTTAATTTCAGGATGA+TGG + chr6_1:99752172-99752191 Msa0902040:intron 40.0%
! TGACTTGTCAGTGTCGTATT+CGG + chr6_1:99752436-99752455 Msa0902040:intron 40.0%
!!! TTTTGATGGCGGTTCTTCTA+AGG + chr6_1:99752580-99752599 Msa0902040:CDS 40.0%
! GCCACTTTCAGATAAGATTC+AGG + chr6_1:99752634-99752653 Msa0902040:CDS 40.0%
ATTCAGGAGTTAGGTCTTGA+AGG + chr6_1:99752650-99752669 Msa0902040:CDS 40.0%
! TAGGTCTTGAAGGTACACAA+AGG + chr6_1:99752660-99752679 Msa0902040:CDS 40.0%
!! TCTCTACTGGCTTAAACACT+TGG + chr6_1:99752846-99752865 Msa0902040:intron 40.0%
!! CTCTACTGGCTTAAACACTT+GGG + chr6_1:99752847-99752866 Msa0902040:intron 40.0%
! AAGCTATCCTGAAGAGCATA+TGG - chr6_1:99752938-99752957 None:intergenic 40.0%
GCAGGGATGAATATTATGCT+TGG + chr6_1:99753189-99753208 Msa0902040:intron 40.0%
CTTTGTCTATTGCAGGTTCA+TGG + chr6_1:99753342-99753361 Msa0902040:intron 40.0%
AATTACCAGCATTTGCGTAG+AGG - chr6_1:99753466-99753485 None:intergenic 40.0%
CTTTCATCTAATGTGGACAG+TGG - chr6_1:99753582-99753601 None:intergenic 40.0%
!! AGACAGCTTTAAAAAGGCTG+TGG - chr6_1:99753627-99753646 None:intergenic 40.0%
! TTTAAAGCTGTCTCTTCTGC+CGG + chr6_1:99753634-99753653 Msa0902040:intron 40.0%
!! GGTTTATGATGGCTTTGATC+AGG + chr6_1:99753751-99753770 Msa0902040:intron 40.0%
AAGCCATGCATATTGCTGAA+TGG - chr6_1:99753850-99753869 None:intergenic 40.0%
CTTCTTAATTACAGCCCAGT+CGG - chr6_1:99753910-99753929 None:intergenic 40.0%
TGATTCTACAACCTCAATCC+AGG - chr6_1:99754078-99754097 None:intergenic 40.0%
!! GGGTTTCACTTTTACCCTTT+TGG + chr6_1:99754128-99754147 Msa0902040:intron 40.0%
!! TTCACTTTTACCCTTTTGGC+GGG + chr6_1:99754132-99754151 Msa0902040:intron 40.0%
!! GGGTTTCACTTTTACCCTTT+TGG + chr6_1:99754128-99754147 Msa0902040:intron 40.0%
!! TCACTTTTACCCTTTTGGCT+TGG + chr6_1:99754183-99754202 Msa0902040:intron 40.0%
!!! CACTTTTACCCTTTTGGCTT+GGG + chr6_1:99754184-99754203 Msa0902040:intron 40.0%
CTAATACTCCCAAGCCAAAA+GGG - chr6_1:99754195-99754214 None:intergenic 40.0%
TCTAATACTCCCAAGCCAAA+AGG - chr6_1:99754196-99754215 None:intergenic 40.0%
!!! TTTTGGCTTGGGAGTATTAG+AGG + chr6_1:99754195-99754214 Msa0902040:intron 40.0%
GGGAAAACTATAGTGTAGGA+GGG - chr6_1:99754292-99754311 None:intergenic 40.0%
ACAGGGGAAAACTATAGTGT+AGG - chr6_1:99754296-99754315 None:intergenic 40.0%
!! ATTTGAGGGGGTTAGTTACA+GGG - chr6_1:99754313-99754332 None:intergenic 40.0%
TAACTAACCCCCTCAAATCT+AGG + chr6_1:99754315-99754334 Msa0902040:intron 40.0%
GATAACTCCTAGATTTGAGG+GGG - chr6_1:99754325-99754344 None:intergenic 40.0%
GGATAACTCCTAGATTTGAG+GGG - chr6_1:99754326-99754345 None:intergenic 40.0%
GGGATAACTCCTAGATTTGA+GGG - chr6_1:99754327-99754346 None:intergenic 40.0%
ACAGCCTCTTGTGTAAAAAC+AGG + chr6_1:99754444-99754463 Msa0902040:intron 40.0%
CAGCCTCTTGTGTAAAAACA+GGG + chr6_1:99754445-99754464 Msa0902040:intron 40.0%
CTAATCTATGAGCTGTTCTC+TGG + chr6_1:99754778-99754797 Msa0902040:CDS 40.0%
ATTTAATCTACGAGAAGGCG+TGG - chr6_1:99755034-99755053 None:intergenic 40.0%
GAGAGCTGCACGATAATATT+TGG + chr6_1:99755308-99755327 Msa0902040:intron 40.0%
!! TCTCTGGAATTCTTCCTGTT+TGG + chr6_1:99755810-99755829 Msa0902040:intron 40.0%
!! CTCTGGAATTCTTCCTGTTT+GGG + chr6_1:99755811-99755830 Msa0902040:intron 40.0%
! TTCTTCCTGTTTGGGTTTGT+TGG + chr6_1:99755819-99755838 Msa0902040:intron 40.0%
CTGCTAAATTTGGAAGCTTG+CGG - chr6_1:99755944-99755963 None:intergenic 40.0%
TCAAGGGCAGAAGCTAATAA+AGG - chr6_1:99756098-99756117 None:intergenic 40.0%
TTAGCTTCTGCCCTTGAATT+TGG + chr6_1:99756101-99756120 Msa0902040:CDS 40.0%
AGCAGCTGAACCAAATTCAA+GGG - chr6_1:99756114-99756133 None:intergenic 40.0%
TCAACAATGCAGTCAAAGCA+GGG - chr6_1:99756139-99756158 None:intergenic 40.0%
TTCAACAATGCAGTCAAAGC+AGG - chr6_1:99756140-99756159 None:intergenic 40.0%
! CATTGTTGAAAATGGGTTCC+TGG + chr6_1:99756150-99756169 Msa0902040:CDS 40.0%
TGATGAACAGGTATGTAGTC+AGG + chr6_1:99756397-99756416 Msa0902040:intron 40.0%
AGAAACCAGTAGCAACATGA+GGG - chr6_1:99756542-99756561 None:intergenic 40.0%
TCTCAAGTCCATGTTAGTTC+TGG + chr6_1:99756593-99756612 Msa0902040:CDS 40.0%
!! CCAAGACTTGGATTAGCTTA+AGG - chr6_1:99757129-99757148 None:intergenic 40.0%
CCTTAAGCTAATCCAAGTCT+TGG + chr6_1:99757126-99757145 Msa0902040:intron 40.0%
! GTGAACTTTTCCCCTTTAAG+TGG - chr6_1:99757158-99757177 None:intergenic 40.0%
! TCGAGTTCGAGTCTTATGAA+CGG - chr6_1:99757195-99757214 None:intergenic 40.0%
! TCCTTGTCACTTAGACCTAT+AGG + chr6_1:99757233-99757252 Msa0902040:intron 40.0%
ACCTATAGGTCTAAGTGACA+AGG - chr6_1:99757237-99757256 None:intergenic 40.0%
TATAATTGCAGCTGCCTCAA+TGG + chr6_1:99757316-99757335 Msa0902040:intron 40.0%
CATAATTGCAGCTGTCTCAA+AGG + chr6_1:99757529-99757548 Msa0902040:intron 40.0%
GAGGAGTCATAAGTGTTAAC+GGG - chr6_1:99757696-99757715 None:intergenic 40.0%
!! TTGTTTTGTAGGTCGATGAG+AGG + chr6_1:99757863-99757882 Msa0902040:intron 40.0%
TGCAAGCTACTTAAACGAAG+GGG + chr6_1:99757931-99757950 Msa0902040:CDS 40.0%
CATCAGTGAATTAACTCCTC+AGG + chr6_1:99758022-99758041 Msa0902040:intron 40.0%
!! GAAAGGTATCACGTAAAGCA+CGG - chr6_1:99758096-99758115 None:intergenic 40.0%
AACATTAGGAAGAATCCGAG+TGG - chr6_1:99758291-99758310 None:intergenic 40.0%
TACTCACAATTGATCCTGAC+AGG + chr6_1:99758315-99758334 Msa0902040:CDS 40.0%
CTATACGCTACATGCTATGT+TGG + chr6_1:99758548-99758567 Msa0902040:intron 40.0%
! CTATGTTGGCTGTTTACACA+GGG + chr6_1:99758562-99758581 Msa0902040:intron 40.0%
TTACACAGGGTGTGTTGAAA+TGG + chr6_1:99758575-99758594 Msa0902040:intron 40.0%
TTTATAACTGCTCCTGGGAT+TGG + chr6_1:99758647-99758666 Msa0902040:intron 40.0%
ACTGGATAGAACAACAACAC+TGG - chr6_1:99758822-99758841 None:intergenic 40.0%
AATCTGAACACTGTAGCTGT+AGG - chr6_1:99758869-99758888 None:intergenic 40.0%
! CACTACGAGAAGGTATAATG+TGG + chr6_1:99759037-99759056 Msa0902040:intron 40.0%
! CTACGAGAAGGTATAATGTG+GGG + chr6_1:99759039-99759058 Msa0902040:intron 40.0%
AGTGGTGCATATATATGGGA+GGG + chr6_1:99759422-99759441 Msa0902040:intron 40.0%
ACAAATATGGCAGAGACTAC+TGG + chr6_1:99759725-99759744 Msa0902040:CDS 40.0%
CAAATATGGCAGAGACTACT+GGG + chr6_1:99759726-99759745 Msa0902040:CDS 40.0%
AAATATGGCAGAGACTACTG+GGG + chr6_1:99759727-99759746 Msa0902040:CDS 40.0%
CCAAGTAAACTTGCATTTCC+TGG - chr6_1:99759779-99759798 None:intergenic 40.0%
CCAGGAAATGCAAGTTTACT+TGG + chr6_1:99759776-99759795 Msa0902040:CDS 40.0%
GCAAGTTTACTTGGGTAAGT+TGG + chr6_1:99759785-99759804 Msa0902040:intron 40.0%
TTTCTTAAGTGGAGTGGAGT+GGG - chr6_1:99759961-99759980 None:intergenic 40.0%
! TTTTCTTAAGTGGAGTGGAG+TGG - chr6_1:99759962-99759981 None:intergenic 40.0%
TCAAAATCGGTCAAGTCTAG+TGG + chr6_1:99760271-99760290 Msa0902040:intron 40.0%
CAAAATCGGTCAAGTCTAGT+GGG + chr6_1:99760272-99760291 Msa0902040:intron 40.0%
AGGCCAAATTGGGAAATTTC+TGG - chr6_1:99760574-99760593 None:intergenic 40.0%
!! GACTGGTCAATGACTTTTTG+AGG - chr6_1:99760603-99760622 None:intergenic 40.0%
GGTATTGTGATGGTACAGTA+TGG + chr6_1:99760782-99760801 Msa0902040:intron 40.0%
ATAGACAAGACAACTACAGG+TGG - chr6_1:99760910-99760929 None:intergenic 40.0%
AATGTGGAGAAACTGATCAG+TGG - chr6_1:99761021-99761040 None:intergenic 40.0%
AACTCTTGTCACTGTGTAGA+TGG + chr6_1:99761061-99761080 Msa0902040:intron 40.0%
ACTCTTGTCACTGTGTAGAT+GGG + chr6_1:99761062-99761081 Msa0902040:intron 40.0%
TATGAGCTCCTTGACTCTAA+AGG + chr6_1:99761086-99761105 Msa0902040:CDS 40.0%
ATGAGCTCCTTGACTCTAAA+GGG + chr6_1:99761087-99761106 Msa0902040:CDS 40.0%
ATCATTAAGCATACCTGAGC+TGG - chr6_1:99761181-99761200 None:intergenic 40.0%
GCTCAGGTATGCTTAATGAT+CGG + chr6_1:99761181-99761200 Msa0902040:intron 40.0%
TGTAAAACAGGCCAAAATGG+GGG - chr6_1:99761271-99761290 None:intergenic 40.0%
TGCTTCACAATTGTTCACCA+GGG - chr6_1:99761478-99761497 None:intergenic 40.0%
TTGCTTCACAATTGTTCACC+AGG - chr6_1:99761479-99761498 None:intergenic 40.0%
TGATACCTCTGTCTTTGCAT+TGG + chr6_1:99761517-99761536 Msa0902040:intron 40.0%
GATACCTCTGTCTTTGCATT+GGG + chr6_1:99761518-99761537 Msa0902040:intron 40.0%
TGTCTTTGCATTGGGAACAA+TGG + chr6_1:99761526-99761545 Msa0902040:intron 40.0%
CTTTCCCTTGAAATCACAAG+AGG + chr6_1:99761552-99761571 Msa0902040:intron 40.0%
! TTCTTTGTTGTGGGGTTTCT+TGG + chr6_1:99761660-99761679 Msa0902040:intron 40.0%
CGCGAATAAAAATGGACCAA+GGG - chr6_1:99761706-99761725 None:intergenic 40.0%
ACGCGAATAAAAATGGACCA+AGG - chr6_1:99761707-99761726 None:intergenic 40.0%
GGAAGAAAACTGAGAAACTG+AGG + chr6_1:99761904-99761923 Msa0902040:intron 40.0%
AACTGAGAAACTGAGGGAAA+TGG + chr6_1:99761911-99761930 Msa0902040:intron 40.0%
CATATTTGCCTCAAGAGTTG+TGG - chr6_1:99761969-99761988 None:intergenic 40.0%
GCTAGAGAATGGAATTGATG+AGG + chr6_1:99762201-99762220 Msa0902040:CDS 40.0%
TGAGGAACCTGAAAATGACA+AGG + chr6_1:99762219-99762238 Msa0902040:CDS 40.0%
GAACCTGAAAATGACAAGGA+TGG + chr6_1:99762223-99762242 Msa0902040:CDS 40.0%
TGAAAATGACAAGGATGGGT+GGG + chr6_1:99762228-99762247 Msa0902040:CDS 40.0%
!! GTTGGCTTTGTTTCTTCAAG+TGG - chr6_1:99762265-99762284 None:intergenic 40.0%
ATGTTAGTAAGAGCTGGAGT+TGG - chr6_1:99762283-99762302 None:intergenic 40.0%
GCTTGAATGTTAGTAAGAGC+TGG - chr6_1:99762289-99762308 None:intergenic 40.0%
CTAACATTCAAGCAGCTCAA+AGG + chr6_1:99762296-99762315 Msa0902040:CDS 40.0%
! TGTGAAACAGGTTGAACAAC+TGG - chr6_1:99762325-99762344 None:intergenic 40.0%
CAACCTGTTTCACAGACAAA+AGG + chr6_1:99762331-99762350 Msa0902040:CDS 40.0%
CTAAAGTGCAGAACTGAACT+AGG - chr6_1:99762552-99762571 None:intergenic 40.0%
! CTCAACCTTGGTGGAATTTT+GGG - chr6_1:99762807-99762826 None:intergenic 40.0%
GGGATGAAGATGAAGATTTG+TGG + chr6_1:99762829-99762848 Msa0902040:CDS 40.0%
AAGGTCTTTGATTGTTGGAG+CGG - chr6_1:99762871-99762890 None:intergenic 40.0%
TAATATTAAGCACGTCGCCA+AGG - chr6_1:99763351-99763370 None:intergenic 40.0%
! GTATGCAAGTGTGCAGTTTT+AGG - chr6_1:99763497-99763516 None:intergenic 40.0%
CAAGGTAACTCGCTACTTGA+GGG - chr6_1:99751809-99751828 None:intergenic 45.0%
ACAAGGTAACTCGCTACTTG+AGG - chr6_1:99751810-99751829 None:intergenic 45.0%
GTTGCTGAACGGAGATGTTA+GGG - chr6_1:99751873-99751892 None:intergenic 45.0%
TGTTGCTGAACGGAGATGTT+AGG - chr6_1:99751874-99751893 None:intergenic 45.0%
TGTTGTATGGGAGATCTCTG+AGG - chr6_1:99752036-99752055 None:intergenic 45.0%
AAGGTTCGCCGATGTTGTAT+GGG - chr6_1:99752048-99752067 None:intergenic 45.0%
TAAGGTTCGCCGATGTTGTA+TGG - chr6_1:99752049-99752068 None:intergenic 45.0%
! TTTCAGGATGATGGTTCACC+AGG + chr6_1:99752181-99752200 Msa0902040:intron 45.0%
! ATTATCTGGAACCAATGCCC+AGG + chr6_1:99752217-99752236 Msa0902040:CDS 45.0%
TAAATGTCCATCCTGGGCAT+TGG - chr6_1:99752231-99752250 None:intergenic 45.0%
GTAATCACATGTGTGGACAG+TGG - chr6_1:99752379-99752398 None:intergenic 45.0%
!!! GCCTTGTTTTGTTTCCTACG+AGG + chr6_1:99752789-99752808 Msa0902040:intron 45.0%
GCCTCGTAGGAAACAAAACA+AGG - chr6_1:99752793-99752812 None:intergenic 45.0%
AAACATGCACTTAGCCTCGT+AGG - chr6_1:99752806-99752825 None:intergenic 45.0%
TACGAGGCTAAGTGCATGTT+TGG + chr6_1:99752805-99752824 Msa0902040:intron 45.0%
ATCCAAACAAGGCCTAAGAC+AGG + chr6_1:99753059-99753078 Msa0902040:intron 45.0%
TCCAAACAAGGCCTAAGACA+GGG + chr6_1:99753060-99753079 Msa0902040:intron 45.0%
GGTTCATGGCAATGTTTGCT+TGG + chr6_1:99753356-99753375 Msa0902040:intron 45.0%
TGTTGTTGTCACGCCAACTT+TGG + chr6_1:99753383-99753402 Msa0902040:CDS 45.0%
TGGAGTTTCCAGTCCAAAGT+TGG - chr6_1:99753399-99753418 None:intergenic 45.0%
GAGCATTCACAATGCTCACA+TGG - chr6_1:99753720-99753739 None:intergenic 45.0%
GTGAATGCTCCCTTAAATGG+AGG + chr6_1:99753730-99753749 Msa0902040:intron 45.0%
!! TCCATGGGCCATTGATTCTT+GGG + chr6_1:99753935-99753954 Msa0902040:CDS 45.0%
!! GCCATTGATTCTTGGGGAAT+GGG + chr6_1:99753942-99753961 Msa0902040:CDS 45.0%
ACCCATTCCCCAAGAATCAA+TGG - chr6_1:99753946-99753965 None:intergenic 45.0%
! GAAGATCTTGGTGCAACAGT+TGG + chr6_1:99754027-99754046 Msa0902040:intron 45.0%
!! TCACTTTTACCCTTTTGGCG+GGG + chr6_1:99754133-99754152 Msa0902040:intron 45.0%
GGGGAAAACTATAGTGTAGG+AGG - chr6_1:99754293-99754312 None:intergenic 45.0%
!! TTTGAGGGGGTTAGTTACAG+GGG - chr6_1:99754312-99754331 None:intergenic 45.0%
!! GATTTGAGGGGGTTAGTTAC+AGG - chr6_1:99754314-99754333 None:intergenic 45.0%
GGGGATAACTCCTAGATTTG+AGG - chr6_1:99754328-99754347 None:intergenic 45.0%
TAGATCTGTGGTTCAAGTCC+TGG + chr6_1:99754419-99754438 Msa0902040:intron 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - chr6_1:99754440-99754459 None:intergenic 45.0%
CGTATAATACCCCGAATGGT+GGG + chr6_1:99754476-99754495 Msa0902040:intron 45.0%
TTCCTGAGAAGTCTGACCTT+GGG - chr6_1:99754850-99754869 None:intergenic 45.0%
ATTCCTGAGAAGTCTGACCT+TGG - chr6_1:99754851-99754870 None:intergenic 45.0%
CAATCTCATCCGGAAGTTAG+AGG - chr6_1:99755503-99755522 None:intergenic 45.0%
!! TGATAGCATTGATCACGGAG+TGG + chr6_1:99755544-99755563 Msa0902040:intron 45.0%
GGAAGCTGCTCTGCTAAATT+TGG - chr6_1:99755954-99755973 None:intergenic 45.0%
CAGCAGCTGAACCAAATTCA+AGG - chr6_1:99756115-99756134 None:intergenic 45.0%
CAACAATGCAGTCAAAGCAG+GGG - chr6_1:99756138-99756157 None:intergenic 45.0%
TATGTTGGAGAAGGCTGACA+CGG - chr6_1:99756340-99756359 None:intergenic 45.0%
! AGCTCAAGCTGTTGATGAAC+AGG + chr6_1:99756385-99756404 Msa0902040:CDS 45.0%
GTTTACCCTCATGTTGCTAC+TGG + chr6_1:99756534-99756553 Msa0902040:CDS 45.0%
GAGAAACCAGTAGCAACATG+AGG - chr6_1:99756543-99756562 None:intergenic 45.0%
TGTCTGGTTAAGTAGAGGTC+TGG + chr6_1:99756996-99757015 Msa0902040:intron 45.0%
TCTGGATTGTGTCAGAGCTT+GGG + chr6_1:99757014-99757033 Msa0902040:intron 45.0%
!!! ATTTTAGGTTCGAGACCCCT+TGG + chr6_1:99757083-99757102 Msa0902040:intron 45.0%
AAGCTAATCCAAGTCTTGGG+TGG + chr6_1:99757130-99757149 Msa0902040:intron 45.0%
TCTTGGGTGGATCCACTTAA+AGG + chr6_1:99757143-99757162 Msa0902040:intron 45.0%
CTTGGGTGGATCCACTTAAA+GGG + chr6_1:99757144-99757163 Msa0902040:intron 45.0%
TTGGGTGGATCCACTTAAAG+GGG + chr6_1:99757145-99757164 Msa0902040:intron 45.0%
! CGAGTTCGAGTCTTATGAAC+GGG - chr6_1:99757194-99757213 None:intergenic 45.0%
GGTCTAAGTGACAAGGAGTT+TGG - chr6_1:99757230-99757249 None:intergenic 45.0%
GGGGTTCACTAATTTAGGAG+GGG - chr6_1:99757361-99757380 None:intergenic 45.0%
CGGGGTTCACTAATTTAGGA+GGG - chr6_1:99757362-99757381 None:intergenic 45.0%
ACGGGGTTCACTAATTTAGG+AGG - chr6_1:99757363-99757382 None:intergenic 45.0%
TGTCTCAAAGGACCTTGTCT+GGG + chr6_1:99757541-99757560 Msa0902040:CDS 45.0%
TGTCTGCAAAAGTAGTCCTG+AGG - chr6_1:99758041-99758060 None:intergenic 45.0%
GATGTCATAGTTGGAACTGG+TGG - chr6_1:99758258-99758277 None:intergenic 45.0%
! GCTATGTTGGCTGTTTACAC+AGG + chr6_1:99758561-99758580 Msa0902040:intron 45.0%
CTCCTGGGATTGGACAAATT+GGG + chr6_1:99758657-99758676 Msa0902040:intron 45.0%
TCCTGGGATTGGACAAATTG+GGG + chr6_1:99758658-99758677 Msa0902040:intron 45.0%
CAGTGGTGCATATATATGGG+AGG + chr6_1:99759421-99759440 Msa0902040:intron 45.0%
! CAGAAAAGAGCATGAGCATG+AGG - chr6_1:99759691-99759710 None:intergenic 45.0%
AATATGGCAGAGACTACTGG+GGG + chr6_1:99759728-99759747 Msa0902040:CDS 45.0%
TGCTTAACATGTGGTCTGCA+TGG - chr6_1:99759827-99759846 None:intergenic 45.0%
TGCACTCGTTGCTTAACATG+TGG - chr6_1:99759836-99759855 None:intergenic 45.0%
! TAAGATGATGGTACTCCCTC+CGG + chr6_1:99759906-99759925 Msa0902040:intron 45.0%
GTGGGCCATGTCAATAAGTT+TGG + chr6_1:99760290-99760309 Msa0902040:intron 45.0%
GGGCCAGAAATTTCCCAATT+TGG + chr6_1:99760568-99760587 Msa0902040:intron 45.0%
!!! ATGACTTTTTGAGGCAGGTC+AGG - chr6_1:99760594-99760613 None:intergenic 45.0%
!!! GGTCAATGACTTTTTGAGGC+AGG - chr6_1:99760599-99760618 None:intergenic 45.0%
AGCCACTAGAGCTGTTAGTT+TGG - chr6_1:99760635-99760654 None:intergenic 45.0%
CTAGAACTCACAGAAGCAAC+TGG - chr6_1:99761132-99761151 None:intergenic 45.0%
GAGCTGGCATTAGAAGATGT+TGG - chr6_1:99761165-99761184 None:intergenic 45.0%
ACATCTTCTAATGCCAGCTC+AGG + chr6_1:99761165-99761184 Msa0902040:CDS 45.0%
CCAGGGAGATAGCATTATTC+AGG - chr6_1:99761461-99761480 None:intergenic 45.0%
CCTGAATAATGCTATCTCCC+TGG + chr6_1:99761458-99761477 Msa0902040:intron 45.0%
TGTTCCCAATGCAAAGACAG+AGG - chr6_1:99761525-99761544 None:intergenic 45.0%
AGTTGTGGATAGGGAGATGA+GGG - chr6_1:99761954-99761973 None:intergenic 45.0%
TGCCTCAAGAGTTGTGGATA+GGG - chr6_1:99761963-99761982 None:intergenic 45.0%
TTGCCTCAAGAGTTGTGGAT+AGG - chr6_1:99761964-99761983 None:intergenic 45.0%
GGTGTGGAATTTACACGGAT+AGG - chr6_1:99762124-99762143 None:intergenic 45.0%
CGTTGATGTAGGAGATGTAG+GGG - chr6_1:99762167-99762186 None:intergenic 45.0%
CCGTTGATGTAGGAGATGTA+GGG - chr6_1:99762168-99762187 None:intergenic 45.0%
CCCTACATCTCCTACATCAA+CGG + chr6_1:99762165-99762184 Msa0902040:CDS 45.0%
TCCGTTGATGTAGGAGATGT+AGG - chr6_1:99762169-99762188 None:intergenic 45.0%
ACATCTCCTACATCAACGGA+TGG + chr6_1:99762169-99762188 Msa0902040:CDS 45.0%
!!! CACCCATCCTTGTCATTTTC+AGG - chr6_1:99762229-99762248 None:intergenic 45.0%
CTGAAAATGACAAGGATGGG+TGG + chr6_1:99762227-99762246 Msa0902040:CDS 45.0%
ACATTCAAGCAGCTCAAAGG+CGG + chr6_1:99762299-99762318 Msa0902040:CDS 45.0%
! GCTCAACCTTGGTGGAATTT+TGG - chr6_1:99762808-99762827 None:intergenic 45.0%
AAATTCCACCAAGGTTGAGC+AGG + chr6_1:99762808-99762827 Msa0902040:CDS 45.0%
AATTCCACCAAGGTTGAGCA+GGG + chr6_1:99762809-99762828 Msa0902040:CDS 45.0%
AGGTCTTTGATTGTTGGAGC+GGG - chr6_1:99762870-99762889 None:intergenic 45.0%
! GTTTAGCTGAGCAGAGCTTT+TGG - chr6_1:99763002-99763021 None:intergenic 45.0%
AAAGCTCTGCTCAGCTAAAC+CGG + chr6_1:99763002-99763021 Msa0902040:three_prime_UTR 45.0%
TAAACCGGACATCATCAGGA+GGG + chr6_1:99763017-99763036 Msa0902040:three_prime_UTR 45.0%
TGCCCTGGAAAGTGGAAATT+TGG - chr6_1:99763049-99763068 None:intergenic 45.0%
! CTGTAACTTGCAACGCAACA+AGG + chr6_1:99763297-99763316 Msa0902040:three_prime_UTR 45.0%
!!! CTTTTTATTTTTTAAATAAA+AGG + chr6_1:99753774-99753793 Msa0902040:intron 5.0%
!! ATTATAAATTTATAGTAAAA+GGG - chr6_1:99753984-99754003 None:intergenic 5.0%
!! AATTTCAATATAATATATAT+AGG + chr6_1:99756268-99756287 Msa0902040:intron 5.0%
!!! TAACATATTTAAAATTATAA+GGG - chr6_1:99759347-99759366 None:intergenic 5.0%
!!! ATAACATATTTAAAATTATA+AGG - chr6_1:99759348-99759367 None:intergenic 5.0%
!! CAAAAAAAAAAAAAAAAATT+AGG + chr6_1:99760409-99760428 Msa0902040:intron 5.0%
!!! TTATATTATTTATATTTTTG+AGG + chr6_1:99760476-99760495 Msa0902040:intron 5.0%
! GCTACTTGAGGGTCCCTTTT+TGG - chr6_1:99751798-99751817 None:intergenic 50.0%
! GTTGTTGGTGGATCTGGAAC+TGG + chr6_1:99752010-99752029 Msa0902040:CDS 50.0%
CGCAGCTAAATGTCCATCCT+GGG - chr6_1:99752237-99752256 None:intergenic 50.0%
CCAGGATGGACATTTAGCTG+CGG + chr6_1:99752235-99752254 Msa0902040:CDS 50.0%
CAGGATGGACATTTAGCTGC+GGG + chr6_1:99752236-99752255 Msa0902040:CDS 50.0%
CATTTAGCTGCGGGTCGTAA+TGG + chr6_1:99752245-99752264 Msa0902040:CDS 50.0%
! ACACCTTGGTTCAGAGGTGT+CGG - chr6_1:99752354-99752373 None:intergenic 50.0%
GTGGATACACCTTGGTTCAG+AGG - chr6_1:99752360-99752379 None:intergenic 50.0%
TGTGGACAGTGGATACACCT+TGG - chr6_1:99752368-99752387 None:intergenic 50.0%
CGACACTGACAAGTCAAGAC+TGG - chr6_1:99752432-99752451 None:intergenic 50.0%
!! TTCGGTGTCTGAGTCTGTGT+CGG + chr6_1:99752454-99752473 Msa0902040:intron 50.0%
!! TCCCTGTCTTAGGCCTTGTT+TGG - chr6_1:99753064-99753083 None:intergenic 50.0%
TATTCACCTTGTGGGGTTGC+AGG + chr6_1:99753171-99753190 Msa0902040:intron 50.0%
ATTCACCTTGTGGGGTTGCA+GGG + chr6_1:99753172-99753191 Msa0902040:intron 50.0%
TTGTCACGCCAACTTTGGAC+TGG + chr6_1:99753388-99753407 Msa0902040:CDS 50.0%
GACATCCTCTACGCAAATGC+TGG + chr6_1:99753458-99753477 Msa0902040:CDS 50.0%
GGAGCTAGCAAAATCCGACT+GGG + chr6_1:99753893-99753912 Msa0902040:CDS 50.0%
CAAGAATCAATGGCCCATGG+AGG - chr6_1:99753936-99753955 None:intergenic 50.0%
!! CTCCATGGGCCATTGATTCT+TGG + chr6_1:99753934-99753953 Msa0902040:CDS 50.0%
!! CCATGGGCCATTGATTCTTG+GGG + chr6_1:99753936-99753955 Msa0902040:CDS 50.0%
!! GGCCATTGATTCTTGGGGAA+TGG + chr6_1:99753941-99753960 Msa0902040:CDS 50.0%
TTGCATTTGCCCCGCCAAAA+GGG - chr6_1:99754145-99754164 None:intergenic 50.0%
TTTGCATTTGCCCCGCCAAA+AGG - chr6_1:99754146-99754165 None:intergenic 50.0%
GCTGCGTATAATACCCCGAA+TGG + chr6_1:99754472-99754491 Msa0902040:intron 50.0%
GCGTATAATACCCCGAATGG+TGG + chr6_1:99754475-99754494 Msa0902040:intron 50.0%
CTAAAGCTCCCGCATACACA+GGG - chr6_1:99754515-99754534 None:intergenic 50.0%
ACTAAAGCTCCCGCATACAC+AGG - chr6_1:99754516-99754535 None:intergenic 50.0%
! ATGCGGGAGCTTTAGTACAC+CGG + chr6_1:99754520-99754539 Msa0902040:intron 50.0%
TAACACTGCCTCCATTCCCA+AGG + chr6_1:99754831-99754850 Msa0902040:CDS 50.0%
AAGTCTGACCTTGGGAATGG+AGG - chr6_1:99754842-99754861 None:intergenic 50.0%
GAGAAGTCTGACCTTGGGAA+TGG - chr6_1:99754845-99754864 None:intergenic 50.0%
TTCCCAAGGTCAGACTTCTC+AGG + chr6_1:99754845-99754864 Msa0902040:intron 50.0%
CTCTGCTTCCAGATTACCAG+CGG + chr6_1:99754998-99755017 Msa0902040:CDS 50.0%
CTTCGGAGCCAGAACTAACA+TGG - chr6_1:99756604-99756623 None:intergenic 50.0%
!! CATGTTAGTTCTGGCTCCGA+AGG + chr6_1:99756602-99756621 Msa0902040:CDS 50.0%
GTCTGGATTGTGTCAGAGCT+TGG + chr6_1:99757013-99757032 Msa0902040:intron 50.0%
AAGTGGATCCACCCAAGACT+TGG - chr6_1:99757141-99757160 None:intergenic 50.0%
CTGTCTCAAAGGACCTTGTC+TGG + chr6_1:99757540-99757559 Msa0902040:CDS 50.0%
GATACCTTTCCACCTGCTAG+AGG + chr6_1:99758106-99758125 Msa0902040:CDS 50.0%
CTAATACCTGCTCCTCTAGC+AGG - chr6_1:99758121-99758140 None:intergenic 50.0%
GCTCCTGGGATTGGACAAAT+TGG + chr6_1:99758656-99758675 Msa0902040:intron 50.0%
CCTGGGATTGGACAAATTGG+GGG + chr6_1:99758659-99758678 Msa0902040:intron 50.0%
CTGGGATTGGACAAATTGGG+GGG + chr6_1:99758660-99758679 Msa0902040:intron 50.0%
GGCAAAGCAACACTACGAGA+AGG + chr6_1:99759027-99759046 Msa0902040:CDS 50.0%
!! CTATGGATGGTGGGCCAAAA+GGG - chr6_1:99760537-99760556 None:intergenic 50.0%
!! TCTATGGATGGTGGGCCAAA+AGG - chr6_1:99760538-99760557 None:intergenic 50.0%
! TTTTGGCCCACCATCCATAG+AGG + chr6_1:99760537-99760556 Msa0902040:intron 50.0%
GTCATTGACCAGTCATGGGT+TGG + chr6_1:99760609-99760628 Msa0902040:intron 50.0%
TAGTTTGGCCAACCCATGAC+TGG - chr6_1:99760620-99760639 None:intergenic 50.0%
! GGCCAAACTAACAGCTCTAG+TGG + chr6_1:99760630-99760649 Msa0902040:intron 50.0%
TGAAGACCCGCTAGTACATC+AGG - chr6_1:99760967-99760986 None:intergenic 50.0%
!! AGGCTTGCCCTTTAGAGTCA+AGG - chr6_1:99761097-99761116 None:intergenic 50.0%
GCAACTGGAGCATGATCAGA+AGG - chr6_1:99761117-99761136 None:intergenic 50.0%
! GATCTACACCTCCCCCATTT+TGG + chr6_1:99761257-99761276 Msa0902040:intron 50.0%
AAAACAGGCCAAAATGGGGG+AGG - chr6_1:99761268-99761287 None:intergenic 50.0%
GTTGTGGATAGGGAGATGAG+GGG - chr6_1:99761953-99761972 None:intergenic 50.0%
GAGTTGTGGATAGGGAGATG+AGG - chr6_1:99761955-99761974 None:intergenic 50.0%
CTCCCTATCCACAACTCTTG+AGG + chr6_1:99761958-99761977 Msa0902040:intron 50.0%
!! ACACGGATAGGTGCTGTTGA+AGG - chr6_1:99762112-99762131 None:intergenic 50.0%
GTGGTCAGTGAAATCTGGTG+TGG - chr6_1:99762140-99762159 None:intergenic 50.0%
GCATGGTGGTCAGTGAAATC+TGG - chr6_1:99762145-99762164 None:intergenic 50.0%
ATGTAGGAGATGTAGGGGCA+TGG - chr6_1:99762162-99762181 None:intergenic 50.0%
TCCTACATCAACGGATGGCT+GGG + chr6_1:99762174-99762193 Msa0902040:CDS 50.0%
TCCTAGAAGTGGGTGATGTG+AGG + chr6_1:99762517-99762536 Msa0902040:intron 50.0%
CCTAGAAGTGGGTGATGTGA+GGG + chr6_1:99762518-99762537 Msa0902040:intron 50.0%
TCTTCATCCCTGCTCAACCT+TGG - chr6_1:99762819-99762838 None:intergenic 50.0%
CAGCTAAACCGGACATCATC+AGG + chr6_1:99763013-99763032 Msa0902040:three_prime_UTR 50.0%
CTAAACCGGACATCATCAGG+AGG + chr6_1:99763016-99763035 Msa0902040:three_prime_UTR 50.0%
! ACATCCCTCCTGATGATGTC+CGG - chr6_1:99763024-99763043 None:intergenic 50.0%
TCCACTTTCCAGGGCACAAA+AGG + chr6_1:99763053-99763072 Msa0902040:three_prime_UTR 50.0%
! TCCTTTTGTGCCCTGGAAAG+TGG - chr6_1:99763057-99763076 None:intergenic 50.0%
CTTGCAACGCAACAAGGCTT+TGG + chr6_1:99763303-99763322 Msa0902040:three_prime_UTR 50.0%
GCTACATGCTCTTTGAGCCT+TGG + chr6_1:99763331-99763350 Msa0902040:three_prime_UTR 50.0%
TGTTAGGGAGGAGGAGGGAT+TGG - chr6_1:99751858-99751877 None:intergenic 55.0%
GGAGATGTTAGGGAGGAGGA+GGG - chr6_1:99751863-99751882 None:intergenic 55.0%
GAACGGAGATGTTAGGGAGG+AGG - chr6_1:99751867-99751886 None:intergenic 55.0%
GCTGAACGGAGATGTTAGGG+AGG - chr6_1:99751870-99751889 None:intergenic 55.0%
CGAACCTTACCCTTCCGCTT+GGG + chr6_1:99752060-99752079 Msa0902040:CDS 55.0%
GAACCTTACCCTTCCGCTTG+GGG + chr6_1:99752061-99752080 Msa0902040:CDS 55.0%
ATGAAGCCAAGAGCCCCAAG+CGG - chr6_1:99752077-99752096 None:intergenic 55.0%
GGCTCTTGGCTTCATCATCG+CGG + chr6_1:99752082-99752101 Msa0902040:CDS 55.0%
TCATCATCGCGGTACCTCCA+AGG + chr6_1:99752093-99752112 Msa0902040:CDS 55.0%
! TCTGGAACCAATGCCCAGGA+TGG + chr6_1:99752221-99752240 Msa0902040:CDS 55.0%
CCGCAGCTAAATGTCCATCC+TGG - chr6_1:99752238-99752257 None:intergenic 55.0%
ACAAGGCCTAAGACAGGGAC+TGG + chr6_1:99753065-99753084 Msa0902040:intron 55.0%
CAAGGCCTAAGACAGGGACT+GGG + chr6_1:99753066-99753085 Msa0902040:intron 55.0%
ACACTCCCAGTCCCTGTCTT+AGG - chr6_1:99753074-99753093 None:intergenic 55.0%
TTCATCCCTGCAACCCCACA+AGG - chr6_1:99753180-99753199 None:intergenic 55.0%
CGGAGCTAGCAAAATCCGAC+TGG + chr6_1:99753892-99753911 Msa0902040:CDS 55.0%
CCCCAAGAATCAATGGCCCA+TGG - chr6_1:99753939-99753958 None:intergenic 55.0%
! GGAGTCGTTGCTGCTTGACT+AGG + chr6_1:99754048-99754067 Msa0902040:intron 55.0%
! GTCGTTGCTGCTTGACTAGG+AGG + chr6_1:99754051-99754070 Msa0902040:intron 55.0%
GACTAGGAGGTCCTGGATTG+AGG + chr6_1:99754064-99754083 Msa0902040:intron 55.0%
CTGAGTAGCCGCTGGTAATC+TGG - chr6_1:99755009-99755028 None:intergenic 55.0%
GAACTCCTCAGCTGAAAGCC+AGG - chr6_1:99756171-99756190 None:intergenic 55.0%
AGCTGAGGAGTTCCGTGTCA+AGG + chr6_1:99756178-99756197 Msa0902040:CDS 55.0%
ACGGACAGCTCGATCATTGG+AGG - chr6_1:99756321-99756340 None:intergenic 55.0%
GACACGGACAGCTCGATCAT+TGG - chr6_1:99756324-99756343 None:intergenic 55.0%
! TCGGATTTGGGGCCAAGATG+TGG + chr6_1:99756890-99756909 Msa0902040:intron 55.0%
TGCTCCTCTAGCAGGTGGAA+AGG - chr6_1:99758113-99758132 None:intergenic 55.0%
TTTCCACCTGCTAGAGGAGC+AGG + chr6_1:99758112-99758131 Msa0902040:CDS 55.0%
ATACCTGCTCCTCTAGCAGG+TGG - chr6_1:99758118-99758137 None:intergenic 55.0%
CCCCCAATTTGTCCAATCCC+AGG - chr6_1:99758662-99758681 None:intergenic 55.0%
CAAATTGGGGGGCAAGAGAC+TGG + chr6_1:99758671-99758690 Msa0902040:intron 55.0%
GCCCACCATCCATAGAGGTT+GGG + chr6_1:99760542-99760561 Msa0902040:intron 55.0%
CCCCAACCTCTATGGATGGT+GGG - chr6_1:99760546-99760565 None:intergenic 55.0%
CCCACCATCCATAGAGGTTG+GGG + chr6_1:99760543-99760562 Msa0902040:intron 55.0%
CATCCATAGAGGTTGGGGCT+GGG + chr6_1:99760548-99760567 Msa0902040:intron 55.0%
GAGGCAGGTCAGGCCAAATT+GGG - chr6_1:99760584-99760603 None:intergenic 55.0%
TGAGGCAGGTCAGGCCAAAT+TGG - chr6_1:99760585-99760604 None:intergenic 55.0%
ATGGAGCTCTGCACCACCTT+AGG + chr6_1:99760938-99760957 Msa0902040:intron 55.0%
TGGAGCTCTGCACCACCTTA+GGG + chr6_1:99760939-99760958 Msa0902040:intron 55.0%
CTAGTACATCAGGCGCCCTA+AGG - chr6_1:99760957-99760976 None:intergenic 55.0%
! TAGGGCGCCTGATGTACTAG+CGG + chr6_1:99760957-99760976 Msa0902040:intron 55.0%
! TAGGAGATGTAGGGGCATGG+TGG - chr6_1:99762159-99762178 None:intergenic 55.0%
CTCCTACATCAACGGATGGC+TGG + chr6_1:99762173-99762192 Msa0902040:CDS 55.0%
CCTACATCAACGGATGGCTG+GGG + chr6_1:99762175-99762194 Msa0902040:CDS 55.0%
CTACATCAACGGATGGCTGG+GGG + chr6_1:99762176-99762195 Msa0902040:CDS 55.0%
TACATCAACGGATGGCTGGG+GGG + chr6_1:99762177-99762196 Msa0902040:CDS 55.0%
CCCTCACATCACCCACTTCT+AGG - chr6_1:99762521-99762540 None:intergenic 55.0%
GGGAAAGGTGACTAAGGCTG+TGG - chr6_1:99762602-99762621 None:intergenic 55.0%
CGCGACCCAAAATTCCACCA+AGG + chr6_1:99762799-99762818 Msa0902040:CDS 55.0%
TCATCCCTGCTCAACCTTGG+TGG - chr6_1:99762816-99762835 None:intergenic 55.0%
TCCAGGGCACAAAAGGAACG+AGG + chr6_1:99763060-99763079 Msa0902040:three_prime_UTR 55.0%
! TCCTCGTTCCTTTTGTGCCC+TGG - chr6_1:99763064-99763083 None:intergenic 55.0%
CGGAGATGTTAGGGAGGAGG+AGG - chr6_1:99751864-99751883 None:intergenic 60.0%
GCGAACCTTACCCTTCCGCT+TGG + chr6_1:99752059-99752078 Msa0902040:CDS 60.0%
! GCACCGACACCTCTGAACCA+AGG + chr6_1:99752348-99752367 Msa0902040:intron 60.0%
GCTGCTTGACTAGGAGGTCC+TGG + chr6_1:99754057-99754076 Msa0902040:intron 60.0%
CATACACAGGGTCCGGGAAG+GGG - chr6_1:99754503-99754522 None:intergenic 60.0%
GCATACACAGGGTCCGGGAA+GGG - chr6_1:99754504-99754523 None:intergenic 60.0%
CTTCCCGGACCCTGTGTATG+CGG + chr6_1:99754503-99754522 Msa0902040:intron 60.0%
TTCCCGGACCCTGTGTATGC+GGG + chr6_1:99754504-99754523 Msa0902040:intron 60.0%
! GGGTTCCTGGCTTTCAGCTG+AGG + chr6_1:99756163-99756182 Msa0902040:CDS 60.0%
! ACTACTGGGGGTGCAAGCGA+TGG + chr6_1:99759740-99759759 Msa0902040:CDS 60.0%
!! GGATGGTGGGCCAAAAGGGA+GGG - chr6_1:99760533-99760552 None:intergenic 60.0%
!! TGGATGGTGGGCCAAAAGGG+AGG - chr6_1:99760534-99760553 None:intergenic 60.0%
GGCCCACCATCCATAGAGGT+TGG + chr6_1:99760541-99760560 Msa0902040:intron 60.0%
GCCCCAACCTCTATGGATGG+TGG - chr6_1:99760547-99760566 None:intergenic 60.0%
CCAGCCCCAACCTCTATGGA+TGG - chr6_1:99760550-99760569 None:intergenic 60.0%
CCATCCATAGAGGTTGGGGC+TGG + chr6_1:99760547-99760566 Msa0902040:intron 60.0%
GTACATCAGGCGCCCTAAGG+TGG - chr6_1:99760954-99760973 None:intergenic 60.0%
! AGGGCGCCTGATGTACTAGC+GGG + chr6_1:99760958-99760977 Msa0902040:intron 60.0%
CCCCAGCCATCCGTTGATGT+AGG - chr6_1:99762178-99762197 None:intergenic 60.0%
TGTTGGAGCGGGAGCTGCTA+TGG - chr6_1:99762859-99762878 None:intergenic 60.0%
AGCTCCTGCGCCCACTACAA+GGG + chr6_1:99762943-99762962 Msa0902040:three_prime_UTR 60.0%
AAGGGCCTGGCCCTTGTAGT+GGG - chr6_1:99762956-99762975 None:intergenic 60.0%
TAAGGGCCTGGCCCTTGTAG+TGG - chr6_1:99762957-99762976 None:intergenic 60.0%
!!! AGCTTTTGGCTCCCCGACCT+CGG - chr6_1:99762988-99763007 None:intergenic 60.0%
GAGCCCCAAGCGGAAGGGTA+AGG - chr6_1:99752067-99752086 None:intergenic 65.0%
ACCCTTCCGCTTGGGGCTCT+TGG + chr6_1:99752068-99752087 Msa0902040:CDS 65.0%
GCCAAGAGCCCCAAGCGGAA+GGG - chr6_1:99752072-99752091 None:intergenic 65.0%
AGCCAAGAGCCCCAAGCGGA+AGG - chr6_1:99752073-99752092 None:intergenic 65.0%
GGAAGGGGTCCCACCATTCG+GGG - chr6_1:99754488-99754507 None:intergenic 65.0%
GGGAAGGGGTCCCACCATTC+GGG - chr6_1:99754489-99754508 None:intergenic 65.0%
CGGGAAGGGGTCCCACCATT+CGG - chr6_1:99754490-99754509 None:intergenic 65.0%
! CGAATGGTGGGACCCCTTCC+CGG + chr6_1:99754488-99754507 Msa0902040:intron 65.0%
CGCATACACAGGGTCCGGGA+AGG - chr6_1:99754505-99754524 None:intergenic 65.0%
CTCCCGCATACACAGGGTCC+GGG - chr6_1:99754509-99754528 None:intergenic 65.0%
GCTCCCGCATACACAGGGTC+CGG - chr6_1:99754510-99754529 None:intergenic 65.0%
GCGTGGAACTGAGTAGCCGC+TGG - chr6_1:99755017-99755036 None:intergenic 65.0%
! GGTTCGTGGGCCCTCCCTTT+TGG + chr6_1:99760520-99760539 Msa0902040:intron 65.0%
TGGCCCAGCCCCAACCTCTA+TGG - chr6_1:99760554-99760573 None:intergenic 65.0%
GGCTGGGGGGAGCTAGAGAA+TGG + chr6_1:99762190-99762209 Msa0902040:CDS 65.0%
GGAGCTGCAATGGCAGCCCA+TGG - chr6_1:99762929-99762948 None:intergenic 65.0%
AGTGGGCGCAGGAGCTGCAA+TGG - chr6_1:99762939-99762958 None:intergenic 65.0%
CAGCTCCTGCGCCCACTACA+AGG + chr6_1:99762942-99762961 Msa0902040:three_prime_UTR 65.0%
CGACCTCGGCCAGCTGCTAA+GGG - chr6_1:99762974-99762993 None:intergenic 65.0%
CCTTAGCAGCTGGCCGAGGT+CGG + chr6_1:99762972-99762991 Msa0902040:three_prime_UTR 65.0%
CTTAGCAGCTGGCCGAGGTC+GGG + chr6_1:99762973-99762992 Msa0902040:three_prime_UTR 65.0%
TTAGCAGCTGGCCGAGGTCG+GGG + chr6_1:99762974-99762993 Msa0902040:three_prime_UTR 65.0%
!! CTGGCCCTTGTAGTGGGCGC+AGG - chr6_1:99762950-99762969 None:intergenic 70.0%
CTGCGCCCACTACAAGGGCC+AGG + chr6_1:99762948-99762967 Msa0902040:three_prime_UTR 70.0%
AGGGCCAGGCCCTTAGCAGC+TGG + chr6_1:99762962-99762981 Msa0902040:three_prime_UTR 70.0%
TCGGCCAGCTGCTAAGGGCC+TGG - chr6_1:99762969-99762988 None:intergenic 70.0%
AGGCCCTTAGCAGCTGGCCG+AGG + chr6_1:99762968-99762987 Msa0902040:three_prime_UTR 70.0%
CCGACCTCGGCCAGCTGCTA+AGG - chr6_1:99762975-99762994 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 99751789 99763565 99751789 ID=Msa0902040;Name=Msa0902040
chr6_1 mRNA 99751789 99763565 99751789 ID=Msa0902040-mRNA-1;Parent=Msa0902040;Name=Msa0902040-mRNA-1;_AED=0.12;_eAED=0.13;_QI=200|0.8|0.80|1|1|1|21|672|742
chr6_1 exon 99751789 99752114 99751789 ID=Msa0902040-mRNA-1:exon:17584;Parent=Msa0902040-mRNA-1
chr6_1 exon 99752203 99752286 99752203 ID=Msa0902040-mRNA-1:exon:17585;Parent=Msa0902040-mRNA-1
chr6_1 exon 99752530 99752681 99752530 ID=Msa0902040-mRNA-1:exon:17586;Parent=Msa0902040-mRNA-1
chr6_1 exon 99753193 99753265 99753193 ID=Msa0902040-mRNA-1:exon:17587;Parent=Msa0902040-mRNA-1
chr6_1 exon 99753357 99753479 99753357 ID=Msa0902040-mRNA-1:exon:17588;Parent=Msa0902040-mRNA-1
chr6_1 exon 99753855 99753963 99753855 ID=Msa0902040-mRNA-1:exon:17589;Parent=Msa0902040-mRNA-1
chr6_1 exon 99754773 99754852 99754773 ID=Msa0902040-mRNA-1:exon:17590;Parent=Msa0902040-mRNA-1
chr6_1 exon 99754997 99755078 99754997 ID=Msa0902040-mRNA-1:exon:17591;Parent=Msa0902040-mRNA-1
chr6_1 exon 99755856 99755995 99755856 ID=Msa0902040-mRNA-1:exon:17592;Parent=Msa0902040-mRNA-1
chr6_1 exon 99756089 99756199 99756089 ID=Msa0902040-mRNA-1:exon:17593;Parent=Msa0902040-mRNA-1
chr6_1 exon 99756290 99756406 99756290 ID=Msa0902040-mRNA-1:exon:17594;Parent=Msa0902040-mRNA-1
chr6_1 exon 99756534 99756623 99756534 ID=Msa0902040-mRNA-1:exon:17595;Parent=Msa0902040-mRNA-1
chr6_1 exon 99757540 99757593 99757540 ID=Msa0902040-mRNA-1:exon:17596;Parent=Msa0902040-mRNA-1
chr6_1 exon 99757874 99757952 99757874 ID=Msa0902040-mRNA-1:exon:17597;Parent=Msa0902040-mRNA-1
chr6_1 exon 99758044 99758133 99758044 ID=Msa0902040-mRNA-1:exon:17598;Parent=Msa0902040-mRNA-1
chr6_1 exon 99758237 99758336 99758237 ID=Msa0902040-mRNA-1:exon:17599;Parent=Msa0902040-mRNA-1
chr6_1 exon 99758979 99759048 99758979 ID=Msa0902040-mRNA-1:exon:17600;Parent=Msa0902040-mRNA-1
chr6_1 exon 99759725 99759798 99759725 ID=Msa0902040-mRNA-1:exon:17601;Parent=Msa0902040-mRNA-1
chr6_1 exon 99761080 99761186 99761080 ID=Msa0902040-mRNA-1:exon:17602;Parent=Msa0902040-mRNA-1
chr6_1 exon 99762089 99762352 99762089 ID=Msa0902040-mRNA-1:exon:17603;Parent=Msa0902040-mRNA-1
chr6_1 exon 99762790 99763565 99762790 ID=Msa0902040-mRNA-1:exon:17604;Parent=Msa0902040-mRNA-1
chr6_1 five_prime_UTR 99751789 99751988 99751789 ID=Msa0902040-mRNA-1:five_prime_utr;Parent=Msa0902040-mRNA-1
chr6_1 CDS 99751989 99752114 99751989 ID=Msa0902040-mRNA-1:cds;Parent=Msa0902040-mRNA-1
chr6_1 CDS 99752203 99752286 99752203 ID=Msa0902040-mRNA-1:cds;Parent=Msa0902040-mRNA-1
chr6_1 CDS 99752530 99752681 99752530 ID=Msa0902040-mRNA-1:cds;Parent=Msa0902040-mRNA-1
chr6_1 CDS 99753193 99753265 99753193 ID=Msa0902040-mRNA-1:cds;Parent=Msa0902040-mRNA-1
chr6_1 CDS 99753357 99753479 99753357 ID=Msa0902040-mRNA-1:cds;Parent=Msa0902040-mRNA-1
chr6_1 CDS 99753855 99753963 99753855 ID=Msa0902040-mRNA-1:cds;Parent=Msa0902040-mRNA-1
chr6_1 CDS 99754773 99754852 99754773 ID=Msa0902040-mRNA-1:cds;Parent=Msa0902040-mRNA-1
chr6_1 CDS 99754997 99755078 99754997 ID=Msa0902040-mRNA-1:cds;Parent=Msa0902040-mRNA-1
chr6_1 CDS 99755856 99755995 99755856 ID=Msa0902040-mRNA-1:cds;Parent=Msa0902040-mRNA-1
chr6_1 CDS 99756089 99756199 99756089 ID=Msa0902040-mRNA-1:cds;Parent=Msa0902040-mRNA-1
chr6_1 CDS 99756290 99756406 99756290 ID=Msa0902040-mRNA-1:cds;Parent=Msa0902040-mRNA-1
chr6_1 CDS 99756534 99756623 99756534 ID=Msa0902040-mRNA-1:cds;Parent=Msa0902040-mRNA-1
chr6_1 CDS 99757540 99757593 99757540 ID=Msa0902040-mRNA-1:cds;Parent=Msa0902040-mRNA-1
chr6_1 CDS 99757874 99757952 99757874 ID=Msa0902040-mRNA-1:cds;Parent=Msa0902040-mRNA-1
chr6_1 CDS 99758044 99758133 99758044 ID=Msa0902040-mRNA-1:cds;Parent=Msa0902040-mRNA-1
chr6_1 CDS 99758237 99758336 99758237 ID=Msa0902040-mRNA-1:cds;Parent=Msa0902040-mRNA-1
chr6_1 CDS 99758979 99759048 99758979 ID=Msa0902040-mRNA-1:cds;Parent=Msa0902040-mRNA-1
chr6_1 CDS 99759725 99759798 99759725 ID=Msa0902040-mRNA-1:cds;Parent=Msa0902040-mRNA-1
chr6_1 CDS 99761080 99761186 99761080 ID=Msa0902040-mRNA-1:cds;Parent=Msa0902040-mRNA-1
chr6_1 CDS 99762089 99762352 99762089 ID=Msa0902040-mRNA-1:cds;Parent=Msa0902040-mRNA-1
chr6_1 CDS 99762790 99762893 99762790 ID=Msa0902040-mRNA-1:cds;Parent=Msa0902040-mRNA-1
chr6_1 three_prime_UTR 99762894 99763565 99762894 ID=Msa0902040-mRNA-1:three_prime_utr;Parent=Msa0902040-mRNA-1
Gene Sequence

>Msa0902040

ATGTTCAAATTCCTGAAAGAAGTTGTTGGTGGATCTGGAACTGGCCTCAGAGATCTCCCATACAACATCGGCGAACCTTACCCTTCCGCTTGGGGCTCTTGGCTTCATCATCGCGGTACCTCCAAGGTTTCAATTTTTTCATTATCTGGAACCAATGCCCAGGATGGACATTTAGCTGCGGGTCGTAATGGTGTCAAGCGTCTACGAACTGTTAGGCATCCAAATATTTTGTCATTTCTTCATAGTTCTGAGATTGAAACTTTTGATGGCGGTTCTTCTAAGGTTACAATTTATATTGTGACTGAACCTGTAATGCCACTTTCAGATAAGATTCAGGAGTTAGGTCTTGAAGGTACACAAAGGGATGAATATTATGCTTGGGGACTGCTTCAAATAGCGAAAGCCGTGAGCTTCTTAAATAATGATTGTAAACTTGTTCATGGCAATGTTTGCTTGGCTAGTGTTGTTGTCACGCCAACTTTGGACTGGAAACTCCATGCTTTTGATGTTCTATCAGAGTTTGATGGGAGTAATGAGACATCCTCTACGCAAATGCTGCAATATGCATGGCTTGTTGCAACACAATACAAATCAACGGAGCTAGCAAAATCCGACTGGGCTGTAATTAAGAAGTCTCCTCCATGGGCCATTGATTCTTGGGGAATGGGTTGTCTAATCTATGAGCTGTTCTCTGGTTTGAAGTTGAGCAAAACAGAGGACTTACGTAACACTGCCTCCATTCCCAAGTCTCTGCTTCCAGATTACCAGCGGCTACTCAGTTCCACGCCTTCTCGTAGATTAAATACATCAAAGCTTATAGAAAACAGTGAGTATTTTCAGAATAAGTTGGTAGACACAATACATTTCATGGAAATTCTTAGTTTGAAAGATAGTGTTGAGAAGGACACTTTCTTCCGCAAGCTTCCAAATTTAGCAGAGCAGCTTCCTCGTCAGATTGTGTTAAAGAAGTTACTTCCTTTATTAGCTTCTGCCCTTGAATTTGGTTCAGCTGCTGCCCCTGCTTTGACTGCATTGTTGAAAATGGGTTCCTGGCTTTCAGCTGAGGAGTTCCGTGTCAAGGTTCTTCCAACAATAATTAAACTCTTTGCCTCCAATGATCGAGCTGTCCGTGTCAGCCTTCTCCAACATATTGAACAATTCGGAGAGTCATTATCAGCTCAAGCTGTTGATGAACAGGTTTACCCTCATGTTGCTACTGGTTTCTCTGATACATCTGCTTTTTTGAGGGAACTTACTCTCAAGTCCATGTTAGTTCTGGCTCCGAAGCTGTCTCAAAGGACCTTGTCTGGGTCATTATTAAAGCATCTATCGAAGTTACAGGTCGATGAGAGGCTGCGATGCGACGAACAAATACAACTATATCTTGCTAGGAAATATTGCAAGCTACTTAAACGAAGGGGACTACTTTTGCAGACAAGAAAAAGAGTGTTGATTAATGCATTTACAGTCCGTGCTTTACGTGATACCTTTCCACCTGCTAGAGGAGCAGGCATTATGGCTTTATGTGCCACCAGTTCCAACTATGACATCAATGAAATTGCCACTCGGATTCTTCCTAATGTTGTTGTACTCACAATTGATCCTGACAGTGATGTTCGATCTAAGGCATTTCAAGCTATTGATCAATTTTTGCAAATGGCAAAGCAACACTACGAGAAGACAAATATGGCAGAGACTACTGGGGGTGCAAGCGATGGAAGTTTATCAATTCCAGGAAATGCAAGTTTACTTGGATGGGCTATGAGCTCCTTGACTCTAAAGGGCAAGCCTTCTGATCATGCTCCAGTTGCTTCTGTGAGTTCTAGTGCCCTTACACCAACATCTTCTAATGCCAGCTCAGGCATTCTAGTTGCAGACACTCCTTCAACAGCACCTATCCGTGTAAATTCCACACCAGATTTCACTGACCACCATGCCCCTACATCTCCTACATCAACGGATGGCTGGGGGGAGCTAGAGAATGGAATTGATGAGGAACCTGAAAATGACAAGGATGGGTGGGATGATTTAGAACCACTTGAAGAAACAAAGCCAACTCCAGCTCTTACTAACATTCAAGCAGCTCAAAGGCGGCCAGTTGTTCAACCTGTTTCACAGACAAAAGCTTCAAGTTCGCGACCCAAAATTCCACCAAGGTTGAGCAGGGATGAAGATGAAGATTTGTGGGGTGCCATAGCAGCTCCCGCTCCAACAATCAAAGACCTTTAA
Protein sequence

>Msa0902040

MFKFLKEVVGGSGTGLRDLPYNIGEPYPSAWGSWLHHRGTSKVSIFSLSGTNAQDGHLAAGRNGVKRLRTVRHPNILSFLHSSEIETFDGGSSKVTIYIVTEPVMPLSDKIQELGLEGTQRDEYYAWGLLQIAKAVSFLNNDCKLVHGNVCLASVVVTPTLDWKLHAFDVLSEFDGSNETSSTQMLQYAWLVATQYKSTELAKSDWAVIKKSPPWAIDSWGMGCLIYELFSGLKLSKTEDLRNTASIPKSLLPDYQRLLSSTPSRRLNTSKLIENSEYFQNKLVDTIHFMEILSLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSAEEFRVKVLPTIIKLFASNDRAVRVSLLQHIEQFGESLSAQAVDEQVYPHVATGFSDTSAFLRELTLKSMLVLAPKLSQRTLSGSLLKHLSKLQVDERLRCDEQIQLYLARKYCKLLKRRGLLLQTRKRVLINAFTVRALRDTFPPARGAGIMALCATSSNYDINEIATRILPNVVVLTIDPDSDVRSKAFQAIDQFLQMAKQHYEKTNMAETTGGASDGSLSIPGNASLLGWAMSSLTLKGKPSDHAPVASVSSSALTPTSSNASSGILVADTPSTAPIRVNSTPDFTDHHAPTSPTSTDGWGELENGIDEEPENDKDGWDDLEPLEETKPTPALTNIQAAQRRPVVQPVSQTKASSSRPKIPPRLSRDEDEDLWGAIAAPAPTIKDL*