Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0921030 | AES88230.1 | 76.829 | 492 | 5 | 5 | 3 | 385 | 636 | 1127 | 0.0 | 720 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0921030 | sp|Q9BBS9|RPOB_LOTJA | 72.549 | 408 | 26 | 5 | 3 | 328 | 649 | 1052 | 0.0 | 564 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0139790 | Msa0921030 | 0.810085 | 1.373430e-50 | -8.615850e-47 |
| Msa0268610 | Msa0921030 | 0.813125 | 2.999097e-51 | -8.615850e-47 |
| Msa0268820 | Msa0921030 | 0.802043 | 6.765044e-49 | -8.615850e-47 |
| Msa0582500 | Msa0921030 | 0.825936 | 3.572039e-54 | -8.615850e-47 |
| Msa0582670 | Msa0921030 | 0.802281 | 6.042368e-49 | -8.615850e-47 |
| Msa0582680 | Msa0921030 | 0.816915 | 4.323079e-52 | -8.615850e-47 |
| Msa0582790 | Msa0921030 | 0.820184 | 7.844178e-53 | -8.615850e-47 |
| Msa0921030 | Msa0931060 | 0.832071 | 1.164876e-55 | -8.615850e-47 |
| Msa0921030 | Msa1086130 | 0.807073 | 6.039027e-50 | -8.615850e-47 |
| Msa0921030 | Msa1086220 | 0.814774 | 1.298140e-51 | -8.615850e-47 |
| Msa0921030 | Msa1086240 | 0.806098 | 9.700029e-50 | -8.615850e-47 |
| Msa0921030 | Msa1086930 | 0.848575 | 5.615605e-60 | -8.615850e-47 |
| Msa0921030 | Msa1305100 | 0.809614 | 1.734496e-50 | -8.615850e-47 |
| Msa0921030 | Msa1305150 | 0.807936 | 3.961416e-50 | -8.615850e-47 |
| Msa0921030 | Msa1355110 | 0.816387 | 5.677760e-52 | -8.615850e-47 |
| Msa0921030 | Msa1380630 | 0.804990 | 1.656441e-49 | -8.615850e-47 |
| Msa0921030 | Msa1380700 | 0.823764 | 1.162157e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0921030 | MtrunA17_Chr4g0016641 | 76.225 | 408 | 11 | 5 | 3 | 328 | 654 | 1057 | 0.0 | 590 |
| Msa0921030 | MtrunA17_CPg0493041 | 76.225 | 408 | 11 | 5 | 3 | 328 | 654 | 1057 | 0.0 | 590 |
| Msa0921030 | MtrunA17_Chr4g0015541 | 65.504 | 258 | 29 | 4 | 169 | 385 | 1 | 239 | 2.66e-105 | 312 |
| Msa0921030 | MtrunA17_Chr1g0159041 | 61.233 | 227 | 16 | 2 | 3 | 188 | 112 | 307 | 1.46e-83 | 257 |
| Msa0921030 | MtrunA17_Chr3g0108431 | 98.592 | 71 | 1 | 0 | 315 | 385 | 5 | 75 | 4.11e-44 | 149 |
| Msa0921030 | MtrunA17_Chr4g0016651 | 98.592 | 71 | 1 | 0 | 315 | 385 | 5 | 75 | 4.11e-44 | 149 |
| Msa0921030 | MtrunA17_Chr3g0108481 | 98.592 | 71 | 1 | 0 | 315 | 385 | 5 | 75 | 4.11e-44 | 149 |
| Msa0921030 | MtrunA17_CPg0493031 | 98.592 | 71 | 1 | 0 | 315 | 385 | 5 | 75 | 4.11e-44 | 149 |
| Msa0921030 | MtrunA17_Chr8g0345421 | 27.811 | 338 | 183 | 7 | 6 | 283 | 732 | 1068 | 2.89e-28 | 117 |
| Msa0921030 | MtrunA17_Chr7g0247561 | 93.878 | 49 | 3 | 0 | 3 | 51 | 30 | 78 | 1.04e-26 | 101 |
| Msa0921030 | MtrunA17_Chr1g0155911 | 32.796 | 186 | 104 | 3 | 119 | 283 | 935 | 1120 | 2.51e-24 | 105 |
| Msa0921030 | MtrunA17_Chr3g0136911 | 24.642 | 349 | 204 | 11 | 3 | 297 | 792 | 1135 | 2.85e-18 | 87.0 |
| Msa0921030 | MtrunA17_Chr8g0375171 | 24.355 | 349 | 205 | 11 | 3 | 297 | 790 | 1133 | 1.37e-17 | 85.1 |
| Msa0921030 | MtrunA17_Chr3g0142431 | 25.654 | 191 | 117 | 4 | 132 | 297 | 2 | 192 | 3.22e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0921030 | ATCG00190.1 | 70.098 | 408 | 36 | 5 | 3 | 328 | 651 | 1054 | 0.0 | 547 |
| Msa0921030 | ATCG00180.1 | 90.141 | 71 | 7 | 0 | 315 | 385 | 5 | 75 | 1.66e-36 | 140 |
| Msa0921030 | AT4G21710.1 | 33.333 | 186 | 103 | 3 | 119 | 283 | 932 | 1117 | 3.09e-25 | 108 |
| Msa0921030 | AT5G45140.2 | 33.152 | 184 | 97 | 3 | 126 | 283 | 914 | 1097 | 7.61e-23 | 101 |
| Msa0921030 | AT5G45140.1 | 33.152 | 184 | 97 | 3 | 126 | 283 | 914 | 1097 | 7.61e-23 | 101 |
| Msa0921030 | AT3G23780.1 | 22.552 | 337 | 198 | 8 | 6 | 283 | 769 | 1101 | 8.31e-15 | 77.0 |
| Msa0921030 | AT3G23780.2 | 22.552 | 337 | 198 | 8 | 6 | 283 | 769 | 1101 | 8.31e-15 | 77.0 |
Find 92 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTCTAAATTTCGGAGTAAA+TGG | 0.137285 | 6_2:+57104957 | None:intergenic |
| CTTGTTTCGCCCTTCCTTTA+AGG | 0.204769 | 6_2:+57104180 | None:intergenic |
| GTTACACAACAACCCCTTAA+AGG | 0.212213 | 6_2:-57104194 | Msa0921030:CDS |
| TGGATTCGATGTTTGTTTAC+TGG | 0.222331 | 6_2:+57104379 | None:intergenic |
| ATATATATATGAATCGTTTC+TGG | 0.228166 | 6_2:+57104698 | None:intergenic |
| TTTGAACAGCCTGTTATAAT+AGG | 0.245428 | 6_2:-57104293 | Msa0921030:CDS |
| TGAATTAATTTCAAGATATA+AGG | 0.248171 | 6_2:+57104266 | None:intergenic |
| GGTCTTCCATCTTGCAAATA+AGG | 0.291965 | 6_2:+57104581 | None:intergenic |
| TTGTTTCGCCCTTCCTTTAA+GGG | 0.292882 | 6_2:+57104181 | None:intergenic |
| ATTCGTGAGGGTACCCCTAA+TGG | 0.306675 | 6_2:+57104539 | None:intergenic |
| TCAAATATTCCGCTCTTTCC+CGG | 0.314064 | 6_2:+57104335 | None:intergenic |
| GGAATATTTGATGGAAGAAC+AGG | 0.334674 | 6_2:-57104323 | Msa0921030:CDS |
| TCTGGAGCATCCACATGTTT+AGG | 0.335634 | 6_2:+57104011 | None:intergenic |
| AATGAATGTAGGACAGATAT+TGG | 0.340082 | 6_2:-57104519 | Msa0921030:CDS |
| ACGAGCAATCGAAAAGATTC+TGG | 0.342745 | 6_2:+57103993 | None:intergenic |
| ATATGGTCTTCAACCCATTA+GGG | 0.343228 | 6_2:-57104553 | Msa0921030:CDS |
| GTACTCGGAACTACGATTAT+TGG | 0.356639 | 6_2:-57104044 | Msa0921030:CDS |
| TCTCCAACAATTTCTCCATT+AGG | 0.369559 | 6_2:+57103775 | None:intergenic |
| AAGTAGCGAGCCTTCGCTTT+GGG | 0.377812 | 6_2:-57105166 | None:intergenic |
| CTCTTGAACAAATAAGTGCT+TGG | 0.377900 | 6_2:-57103813 | Msa0921030:CDS |
| TCCGCTCTTTCCCGGATACT+CGG | 0.379405 | 6_2:+57104343 | None:intergenic |
| GAATGTTCACTCGGATTAGC+TGG | 0.386652 | 6_2:-57104497 | Msa0921030:CDS |
| AAACATCAACACCTTCGAAT+TGG | 0.388144 | 6_2:-57103844 | Msa0921030:CDS |
| GATATTTGAACCCGAGTATC+CGG | 0.389575 | 6_2:-57104354 | Msa0921030:CDS |
| GATATGGTCTTCAACCCATT+AGG | 0.395616 | 6_2:-57104554 | Msa0921030:CDS |
| GTTTGGGCGCTCGAGGGGTT+CGG | 0.396040 | 6_2:-57104131 | Msa0921030:CDS |
| AGATGGAAGACCCGTTGATA+TGG | 0.398344 | 6_2:-57104570 | Msa0921030:CDS |
| TCTTGAACAAATAAGTGCTT+GGG | 0.406773 | 6_2:-57103812 | Msa0921030:CDS |
| ATGGAGGTTTGGGCGCTCGA+GGG | 0.426714 | 6_2:-57104137 | Msa0921030:intron |
| GTCTAAATTTCGGAGTAAAT+GGG | 0.428736 | 6_2:+57104958 | None:intergenic |
| GCCGGGAGACATGGAAATAA+AGG | 0.429982 | 6_2:-57104638 | Msa0921030:CDS |
| TTCGTGAGGGTACCCCTAAT+GGG | 0.434009 | 6_2:+57104540 | None:intergenic |
| CTACCTAATGGAGAAATTGT+TGG | 0.436028 | 6_2:-57103778 | Msa0921030:CDS |
| ATTATAACAGGCTGTTCAAA+AGG | 0.436541 | 6_2:+57104296 | None:intergenic |
| ACTTGTCTAAAACTACCTAT+AGG | 0.437083 | 6_2:-57104782 | Msa0921030:CDS |
| ACCTTTATTTCCATGTCTCC+CGG | 0.449391 | 6_2:+57104637 | None:intergenic |
| ACTCGGCCCCTACCACCTAT+AGG | 0.455800 | 6_2:+57104767 | None:intergenic |
| GAAGTAGCGAGCCTTCGCTT+TGG | 0.459678 | 6_2:-57105167 | None:intergenic |
| AATGGAGGTTTGGGCGCTCG+AGG | 0.461267 | 6_2:-57104138 | Msa0921030:intron |
| GGAAAGAGCGGAATATTTGA+TGG | 0.469164 | 6_2:-57104332 | Msa0921030:CDS |
| CCGCTCTTTCCCGGATACTC+GGG | 0.478316 | 6_2:+57104344 | None:intergenic |
| GGCGAAACAAGGAGGACAAC+GGG | 0.481846 | 6_2:-57104168 | Msa0921030:intron |
| CAAGTTGATGATAAAATACA+TGG | 0.502523 | 6_2:-57104242 | Msa0921030:CDS |
| TGGAGGTTTGGGCGCTCGAG+GGG | 0.505858 | 6_2:-57104136 | Msa0921030:intron |
| TGTACTCATTAGTGAACGTC+TGG | 0.512500 | 6_2:-57105089 | Msa0921030:CDS |
| CAACAATTTCTCCATTAGGT+AGG | 0.513506 | 6_2:+57103779 | None:intergenic |
| GATATGCCTTATTTGCAAGA+TGG | 0.518600 | 6_2:-57104587 | Msa0921030:CDS |
| TATTAGTAGCTTATATGCCA+TGG | 0.519177 | 6_2:-57105135 | Msa0921030:CDS |
| GTAAACAAACATCGAATCCA+TGG | 0.519391 | 6_2:-57104376 | Msa0921030:CDS |
| AAAGTAGGTGATAAAGTGGC+CGG | 0.529519 | 6_2:-57104656 | Msa0921030:intron |
| AAAACTACCTATAGGTGGTA+GGG | 0.530153 | 6_2:-57104774 | Msa0921030:CDS |
| GATAAAGTGGCCGGGAGACA+TGG | 0.532845 | 6_2:-57104647 | Msa0921030:CDS |
| GGGTTGAAGACCATATCAAC+GGG | 0.535156 | 6_2:+57104560 | None:intergenic |
| CACAACAACCCCTTAAAGGA+AGG | 0.535519 | 6_2:-57104190 | Msa0921030:CDS |
| TAAAACTACCTATAGGTGGT+AGG | 0.538804 | 6_2:-57104775 | Msa0921030:CDS |
| TACTCGGGTTCAAATATCCA+TGG | 0.546454 | 6_2:+57104359 | None:intergenic |
| CAGATATTGGAATGTTCACT+CGG | 0.551609 | 6_2:-57104506 | Msa0921030:CDS |
| TAGTGATTCTTTCAGGACCA+TGG | 0.551937 | 6_2:+57105002 | None:intergenic |
| GCCGAGTTATTGATGTGAGA+TGG | 0.559021 | 6_2:-57104751 | Msa0921030:CDS |
| CTCGGAACTACGATTATTGG+AGG | 0.559077 | 6_2:-57104041 | Msa0921030:CDS |
| AACAAGTGCATAATGTCCAC+TGG | 0.566338 | 6_2:+57104214 | None:intergenic |
| TGTTTCGCCCTTCCTTTAAG+GGG | 0.567625 | 6_2:+57104182 | None:intergenic |
| AATGTTCACTCGGATTAGCT+GGG | 0.569063 | 6_2:-57104496 | Msa0921030:CDS |
| CTTAAAGGAAGGGCGAAACA+AGG | 0.579473 | 6_2:-57104179 | Msa0921030:CDS |
| AATTAAAGTAGGTGATAAAG+TGG | 0.581077 | 6_2:-57104660 | Msa0921030:intron |
| ATATTTGAACCCGAGTATCC+GGG | 0.581389 | 6_2:-57104353 | Msa0921030:CDS |
| CAGACTCATGTGACAAGCCA+TGG | 0.581560 | 6_2:-57105019 | Msa0921030:CDS |
| CTGTCCTACATTCATTCGTG+AGG | 0.583153 | 6_2:+57104526 | None:intergenic |
| AGTAAATGGGCTTCTAGATG+TGG | 0.584284 | 6_2:+57104971 | None:intergenic |
| CCCGAGTATCCGGGAAAGAG+CGG | 0.584519 | 6_2:-57104344 | Msa0921030:CDS |
| TAATGGAGAAATTGTTGGAG+AGG | 0.595349 | 6_2:-57103773 | Msa0921030:CDS |
| TCAGAATTGTAACCTTCCCA+TGG | 0.596416 | 6_2:+57105118 | None:intergenic |
| ATTAGTAGCTTATATGCCAT+GGG | 0.596673 | 6_2:-57105134 | Msa0921030:CDS |
| AAGTAGGTGATAAAGTGGCC+GGG | 0.597954 | 6_2:-57104655 | Msa0921030:intron |
| GGGCGAAACAAGGAGGACAA+CGG | 0.598993 | 6_2:-57104169 | Msa0921030:CDS |
| TCCATCTCACATCAATAACT+CGG | 0.602104 | 6_2:+57104750 | None:intergenic |
| AAAAGTGGGATTTGTGCTTG+TGG | 0.607315 | 6_2:-57103667 | Msa0921030:CDS |
| GTAGCTTATATGCCATGGGA+AGG | 0.611195 | 6_2:-57105130 | Msa0921030:CDS |
| TGTCCTACATTCATTCGTGA+GGG | 0.611498 | 6_2:+57104527 | None:intergenic |
| AAAATACATGGACGTTCCAG+TGG | 0.614997 | 6_2:-57104230 | Msa0921030:CDS |
| GAGAAACTGATCCAATTCGA+AGG | 0.617109 | 6_2:+57103833 | None:intergenic |
| AAACTACCTATAGGTGGTAG+GGG | 0.618823 | 6_2:-57104773 | Msa0921030:CDS |
| GTACCCTCACGAATGAATGT+AGG | 0.622385 | 6_2:-57104530 | Msa0921030:CDS |
| TGGGTTGAAGACCATATCAA+CGG | 0.622611 | 6_2:+57104559 | None:intergenic |
| ACAACAACCCCTTAAAGGAA+GGG | 0.636584 | 6_2:-57104189 | Msa0921030:CDS |
| AGGAACAATACCTAAACATG+TGG | 0.641354 | 6_2:-57104021 | Msa0921030:CDS |
| AAAGCTCGTCAAGAAGTACT+CGG | 0.659322 | 6_2:-57104059 | Msa0921030:CDS |
| TATGGTCTTCAACCCATTAG+GGG | 0.670295 | 6_2:-57104552 | Msa0921030:CDS |
| GATTCAGGTATCGACCTCAA+AGG | 0.672007 | 6_2:-57104807 | Msa0921030:intron |
| TGTCTAAAACTACCTATAGG+TGG | 0.673297 | 6_2:-57104779 | Msa0921030:CDS |
| GAATATTTGATGGAAGAACA+GGG | 0.689025 | 6_2:-57104322 | Msa0921030:CDS |
| AAAGGAAGGGCGAAACAAGG+AGG | 0.708508 | 6_2:-57104176 | Msa0921030:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAATTAATTTCAAGATATA+AGG | + | chr6_2:57104554-57104573 | None:intergenic | 15.0% |
| !! | TGAATTAATTTCAAGATATA+AGG | + | chr6_2:57104554-57104573 | None:intergenic | 15.0% |
| !!! | ATTTTATTAGTGATTCTTTC+AGG | + | chr6_2:57103825-57103844 | None:intergenic | 20.0% |
| !!! | TTCCATTTTTGTCTAAATTT+CGG | + | chr6_2:57103872-57103891 | None:intergenic | 20.0% |
| !! | ATATATATATGAATCGTTTC+TGG | + | chr6_2:57104122-57104141 | None:intergenic | 20.0% |
| !!! | TTATTTTGTGAACGAATTTT+TGG | - | chr6_2:57105120-57105139 | Msa0921030:CDS | 20.0% |
| !!! | TATTTTGTGAACGAATTTTT+GGG | - | chr6_2:57105121-57105140 | Msa0921030:CDS | 20.0% |
| !!! | ATTTTATTAGTGATTCTTTC+AGG | + | chr6_2:57103825-57103844 | None:intergenic | 20.0% |
| !!! | TTCCATTTTTGTCTAAATTT+CGG | + | chr6_2:57103872-57103891 | None:intergenic | 20.0% |
| !! | ATATATATATGAATCGTTTC+TGG | + | chr6_2:57104122-57104141 | None:intergenic | 20.0% |
| !!! | TTATTTTGTGAACGAATTTT+TGG | - | chr6_2:57105120-57105139 | Msa0921030:CDS | 20.0% |
| !!! | TATTTTGTGAACGAATTTTT+GGG | - | chr6_2:57105121-57105140 | Msa0921030:CDS | 20.0% |
| ! | AAAAATGGAATTGTGATTCT+GGG | - | chr6_2:57103882-57103901 | Msa0921030:intron | 25.0% |
| ! | AATTAAAGTAGGTGATAAAG+TGG | - | chr6_2:57104157-57104176 | Msa0921030:intron | 25.0% |
| !! | TAAGGTTTTCCTATTATAAC+AGG | + | chr6_2:57104536-57104555 | None:intergenic | 25.0% |
| !!! | CAAGTTGATGATAAAATACA+TGG | - | chr6_2:57104575-57104594 | Msa0921030:CDS | 25.0% |
| !!! | GTTTTGTAATGAAGAGTATA+GGG | + | chr6_2:57105078-57105097 | None:intergenic | 25.0% |
| !! | CAAAATAATCCATCTTTTTC+AGG | + | chr6_2:57105108-57105127 | None:intergenic | 25.0% |
| ! | AAAAATGGAATTGTGATTCT+GGG | - | chr6_2:57103882-57103901 | Msa0921030:intron | 25.0% |
| ! | AATTAAAGTAGGTGATAAAG+TGG | - | chr6_2:57104157-57104176 | Msa0921030:intron | 25.0% |
| !! | TAAGGTTTTCCTATTATAAC+AGG | + | chr6_2:57104536-57104555 | None:intergenic | 25.0% |
| !!! | CAAGTTGATGATAAAATACA+TGG | - | chr6_2:57104575-57104594 | Msa0921030:CDS | 25.0% |
| !!! | GTTTTGTAATGAAGAGTATA+GGG | + | chr6_2:57105078-57105097 | None:intergenic | 25.0% |
| !! | CAAAATAATCCATCTTTTTC+AGG | + | chr6_2:57105108-57105127 | None:intergenic | 25.0% |
| TATTAGTAGCTTATATGCCA+TGG | - | chr6_2:57103682-57103701 | Msa0921030:CDS | 30.0% | |
| ATTAGTAGCTTATATGCCAT+GGG | - | chr6_2:57103683-57103702 | Msa0921030:CDS | 30.0% | |
| GTCTAAATTTCGGAGTAAAT+GGG | + | chr6_2:57103862-57103881 | None:intergenic | 30.0% | |
| TGTCTAAATTTCGGAGTAAA+TGG | + | chr6_2:57103863-57103882 | None:intergenic | 30.0% | |
| CTCCGAAATTTAGACAAAAA+TGG | - | chr6_2:57103867-57103886 | Msa0921030:intron | 30.0% | |
| CAAAAATGGAATTGTGATTC+TGG | - | chr6_2:57103881-57103900 | Msa0921030:intron | 30.0% | |
| AGATTATTACGAGCTATACT+TGG | - | chr6_2:57103987-57104006 | Msa0921030:intron | 30.0% | |
| GATTATTACGAGCTATACTT+GGG | - | chr6_2:57103988-57104007 | Msa0921030:intron | 30.0% | |
| ! | TTTTAGACAAGTTTCCTTTG+AGG | + | chr6_2:57104027-57104046 | None:intergenic | 30.0% |
| ! | ACTTGTCTAAAACTACCTAT+AGG | - | chr6_2:57104035-57104054 | Msa0921030:CDS | 30.0% |
| CAGAAACGTGAAATTAAAGT+AGG | - | chr6_2:57104146-57104165 | Msa0921030:intron | 30.0% | |
| ! | TTCAAAGATTTTGTCTAGAC+AGG | - | chr6_2:57104208-57104227 | Msa0921030:CDS | 30.0% |
| AATGAATGTAGGACAGATAT+TGG | - | chr6_2:57104298-57104317 | Msa0921030:CDS | 30.0% | |
| TGTTCATATCTCTCATCAAA+AGG | + | chr6_2:57104377-57104396 | None:intergenic | 30.0% | |
| ! | TTTTGATGAGAGATATGAAC+AGG | - | chr6_2:57104376-57104395 | Msa0921030:CDS | 30.0% |
| ! | TTCAGAAAACACAAGTTTTC+TGG | + | chr6_2:57104408-57104427 | None:intergenic | 30.0% |
| GAATATTTGATGGAAGAACA+GGG | - | chr6_2:57104495-57104514 | Msa0921030:CDS | 30.0% | |
| ATTATAACAGGCTGTTCAAA+AGG | + | chr6_2:57104524-57104543 | None:intergenic | 30.0% | |
| TTTGAACAGCCTGTTATAAT+AGG | - | chr6_2:57104524-57104543 | Msa0921030:CDS | 30.0% | |
| TCAAAGGAAGGAAGTTTAAT+TGG | - | chr6_2:57104913-57104932 | Msa0921030:intron | 30.0% | |
| TCTTGAACAAATAAGTGCTT+GGG | - | chr6_2:57105005-57105024 | Msa0921030:CDS | 30.0% | |
| GCAAAAAAAATCCTACCTAA+TGG | - | chr6_2:57105027-57105046 | Msa0921030:CDS | 30.0% | |
| !! | GGTTTTGTAATGAAGAGTAT+AGG | + | chr6_2:57105079-57105098 | None:intergenic | 30.0% |
| !! | ATTTTTGGGCCTATAAAAAG+TGG | - | chr6_2:57105135-57105154 | Msa0921030:CDS | 30.0% |
| !! | TTTTTGGGCCTATAAAAAGT+GGG | - | chr6_2:57105136-57105155 | Msa0921030:CDS | 30.0% |
| TATTAGTAGCTTATATGCCA+TGG | - | chr6_2:57103682-57103701 | Msa0921030:CDS | 30.0% | |
| ATTAGTAGCTTATATGCCAT+GGG | - | chr6_2:57103683-57103702 | Msa0921030:CDS | 30.0% | |
| GTCTAAATTTCGGAGTAAAT+GGG | + | chr6_2:57103862-57103881 | None:intergenic | 30.0% | |
| TGTCTAAATTTCGGAGTAAA+TGG | + | chr6_2:57103863-57103882 | None:intergenic | 30.0% | |
| CTCCGAAATTTAGACAAAAA+TGG | - | chr6_2:57103867-57103886 | Msa0921030:intron | 30.0% | |
| CAAAAATGGAATTGTGATTC+TGG | - | chr6_2:57103881-57103900 | Msa0921030:intron | 30.0% | |
| AGATTATTACGAGCTATACT+TGG | - | chr6_2:57103987-57104006 | Msa0921030:intron | 30.0% | |
| GATTATTACGAGCTATACTT+GGG | - | chr6_2:57103988-57104007 | Msa0921030:intron | 30.0% | |
| ! | TTTTAGACAAGTTTCCTTTG+AGG | + | chr6_2:57104027-57104046 | None:intergenic | 30.0% |
| ! | ACTTGTCTAAAACTACCTAT+AGG | - | chr6_2:57104035-57104054 | Msa0921030:CDS | 30.0% |
| CAGAAACGTGAAATTAAAGT+AGG | - | chr6_2:57104146-57104165 | Msa0921030:intron | 30.0% | |
| ! | TTCAAAGATTTTGTCTAGAC+AGG | - | chr6_2:57104208-57104227 | Msa0921030:CDS | 30.0% |
| AATGAATGTAGGACAGATAT+TGG | - | chr6_2:57104298-57104317 | Msa0921030:CDS | 30.0% | |
| TGTTCATATCTCTCATCAAA+AGG | + | chr6_2:57104377-57104396 | None:intergenic | 30.0% | |
| ! | TTTTGATGAGAGATATGAAC+AGG | - | chr6_2:57104376-57104395 | Msa0921030:CDS | 30.0% |
| ! | TTCAGAAAACACAAGTTTTC+TGG | + | chr6_2:57104408-57104427 | None:intergenic | 30.0% |
| GAATATTTGATGGAAGAACA+GGG | - | chr6_2:57104495-57104514 | Msa0921030:CDS | 30.0% | |
| ATTATAACAGGCTGTTCAAA+AGG | + | chr6_2:57104524-57104543 | None:intergenic | 30.0% | |
| TTTGAACAGCCTGTTATAAT+AGG | - | chr6_2:57104524-57104543 | Msa0921030:CDS | 30.0% | |
| TCAAAGGAAGGAAGTTTAAT+TGG | - | chr6_2:57104913-57104932 | Msa0921030:intron | 30.0% | |
| TCTTGAACAAATAAGTGCTT+GGG | - | chr6_2:57105005-57105024 | Msa0921030:CDS | 30.0% | |
| GCAAAAAAAATCCTACCTAA+TGG | - | chr6_2:57105027-57105046 | Msa0921030:CDS | 30.0% | |
| !! | GGTTTTGTAATGAAGAGTAT+AGG | + | chr6_2:57105079-57105098 | None:intergenic | 30.0% |
| !! | ATTTTTGGGCCTATAAAAAG+TGG | - | chr6_2:57105135-57105154 | Msa0921030:CDS | 30.0% |
| !! | TTTTTGGGCCTATAAAAAGT+GGG | - | chr6_2:57105136-57105155 | Msa0921030:CDS | 30.0% |
| !! | AATTGTGATTCTGGGATCTT+GGG | - | chr6_2:57103890-57103909 | Msa0921030:intron | 35.0% |
| !! | AGAAACAGGGGATATTTTAG+TGG | - | chr6_2:57103914-57103933 | Msa0921030:intron | 35.0% |
| !!! | GAAACAGGGGATATTTTAGT+GGG | - | chr6_2:57103915-57103934 | Msa0921030:intron | 35.0% |
| GCTCGTAATAATCTATCTTC+CGG | + | chr6_2:57103981-57104000 | None:intergenic | 35.0% | |
| ! | TGTCTAAAACTACCTATAGG+TGG | - | chr6_2:57104038-57104057 | Msa0921030:CDS | 35.0% |
| TAAAACTACCTATAGGTGGT+AGG | - | chr6_2:57104042-57104061 | Msa0921030:CDS | 35.0% | |
| AAAACTACCTATAGGTGGTA+GGG | - | chr6_2:57104043-57104062 | Msa0921030:CDS | 35.0% | |
| TCCATCTCACATCAATAACT+CGG | + | chr6_2:57104070-57104089 | None:intergenic | 35.0% | |
| AGATGGATCCAAAAAAAAGC+AGG | - | chr6_2:57104083-57104102 | Msa0921030:CDS | 35.0% | |
| !!! | AGCTAGAACCTGCTTTTTTT+TGG | + | chr6_2:57104094-57104113 | None:intergenic | 35.0% |
| !! | GATATGCCTTATTTGCAAGA+TGG | - | chr6_2:57104230-57104249 | Msa0921030:CDS | 35.0% |
| ATATGGTCTTCAACCCATTA+GGG | - | chr6_2:57104264-57104283 | Msa0921030:CDS | 35.0% | |
| CAGATATTGGAATGTTCACT+CGG | - | chr6_2:57104311-57104330 | Msa0921030:CDS | 35.0% | |
| TGGATTCGATGTTTGTTTAC+TGG | + | chr6_2:57104441-57104460 | None:intergenic | 35.0% | |
| GTAAACAAACATCGAATCCA+TGG | - | chr6_2:57104441-57104460 | Msa0921030:intron | 35.0% | |
| GGAATATTTGATGGAAGAAC+AGG | - | chr6_2:57104494-57104513 | Msa0921030:intron | 35.0% | |
| AGGAACAATACCTAAACATG+TGG | - | chr6_2:57104796-57104815 | Msa0921030:CDS | 35.0% | |
| AGAAAGACTTCCAGATTCAA+AGG | - | chr6_2:57104897-57104916 | Msa0921030:intron | 35.0% | |
| AAACTTCCTTCCTTTGAATC+TGG | + | chr6_2:57104910-57104929 | None:intergenic | 35.0% | |
| AAACATCAACACCTTCGAAT+TGG | - | chr6_2:57104973-57104992 | Msa0921030:CDS | 35.0% | |
| CTCTTGAACAAATAAGTGCT+TGG | - | chr6_2:57105004-57105023 | Msa0921030:CDS | 35.0% | |
| CAACAATTTCTCCATTAGGT+AGG | + | chr6_2:57105041-57105060 | None:intergenic | 35.0% | |
| CTACCTAATGGAGAAATTGT+TGG | - | chr6_2:57105039-57105058 | Msa0921030:CDS | 35.0% | |
| TCTCCAACAATTTCTCCATT+AGG | + | chr6_2:57105045-57105064 | None:intergenic | 35.0% | |
| TAATGGAGAAATTGTTGGAG+AGG | - | chr6_2:57105044-57105063 | Msa0921030:CDS | 35.0% | |
| ACCAATAAGCCTGAAAAAGA+TGG | - | chr6_2:57105096-57105115 | Msa0921030:CDS | 35.0% | |
| !!! | TCCATCTTTTTCAGGCTTAT+TGG | + | chr6_2:57105100-57105119 | None:intergenic | 35.0% |
| !!! | GCACAAATCCCACTTTTTAT+AGG | + | chr6_2:57105147-57105166 | None:intergenic | 35.0% |
| !! | AATTGTGATTCTGGGATCTT+GGG | - | chr6_2:57103890-57103909 | Msa0921030:intron | 35.0% |
| !! | AGAAACAGGGGATATTTTAG+TGG | - | chr6_2:57103914-57103933 | Msa0921030:intron | 35.0% |
| !!! | GAAACAGGGGATATTTTAGT+GGG | - | chr6_2:57103915-57103934 | Msa0921030:intron | 35.0% |
| GCTCGTAATAATCTATCTTC+CGG | + | chr6_2:57103981-57104000 | None:intergenic | 35.0% | |
| ! | TGTCTAAAACTACCTATAGG+TGG | - | chr6_2:57104038-57104057 | Msa0921030:CDS | 35.0% |
| TAAAACTACCTATAGGTGGT+AGG | - | chr6_2:57104042-57104061 | Msa0921030:CDS | 35.0% | |
| AAAACTACCTATAGGTGGTA+GGG | - | chr6_2:57104043-57104062 | Msa0921030:CDS | 35.0% | |
| TCCATCTCACATCAATAACT+CGG | + | chr6_2:57104070-57104089 | None:intergenic | 35.0% | |
| AGATGGATCCAAAAAAAAGC+AGG | - | chr6_2:57104083-57104102 | Msa0921030:CDS | 35.0% | |
| !!! | AGCTAGAACCTGCTTTTTTT+TGG | + | chr6_2:57104094-57104113 | None:intergenic | 35.0% |
| !! | GATATGCCTTATTTGCAAGA+TGG | - | chr6_2:57104230-57104249 | Msa0921030:CDS | 35.0% |
| ATATGGTCTTCAACCCATTA+GGG | - | chr6_2:57104264-57104283 | Msa0921030:CDS | 35.0% | |
| CAGATATTGGAATGTTCACT+CGG | - | chr6_2:57104311-57104330 | Msa0921030:CDS | 35.0% | |
| TGGATTCGATGTTTGTTTAC+TGG | + | chr6_2:57104441-57104460 | None:intergenic | 35.0% | |
| GTAAACAAACATCGAATCCA+TGG | - | chr6_2:57104441-57104460 | Msa0921030:intron | 35.0% | |
| GGAATATTTGATGGAAGAAC+AGG | - | chr6_2:57104494-57104513 | Msa0921030:intron | 35.0% | |
| AGGAACAATACCTAAACATG+TGG | - | chr6_2:57104796-57104815 | Msa0921030:CDS | 35.0% | |
| AGAAAGACTTCCAGATTCAA+AGG | - | chr6_2:57104897-57104916 | Msa0921030:intron | 35.0% | |
| AAACTTCCTTCCTTTGAATC+TGG | + | chr6_2:57104910-57104929 | None:intergenic | 35.0% | |
| AAACATCAACACCTTCGAAT+TGG | - | chr6_2:57104973-57104992 | Msa0921030:CDS | 35.0% | |
| CTCTTGAACAAATAAGTGCT+TGG | - | chr6_2:57105004-57105023 | Msa0921030:CDS | 35.0% | |
| CAACAATTTCTCCATTAGGT+AGG | + | chr6_2:57105041-57105060 | None:intergenic | 35.0% | |
| CTACCTAATGGAGAAATTGT+TGG | - | chr6_2:57105039-57105058 | Msa0921030:CDS | 35.0% | |
| TCTCCAACAATTTCTCCATT+AGG | + | chr6_2:57105045-57105064 | None:intergenic | 35.0% | |
| TAATGGAGAAATTGTTGGAG+AGG | - | chr6_2:57105044-57105063 | Msa0921030:CDS | 35.0% | |
| ACCAATAAGCCTGAAAAAGA+TGG | - | chr6_2:57105096-57105115 | Msa0921030:CDS | 35.0% | |
| !!! | TCCATCTTTTTCAGGCTTAT+TGG | + | chr6_2:57105100-57105119 | None:intergenic | 35.0% |
| !!! | GCACAAATCCCACTTTTTAT+AGG | + | chr6_2:57105147-57105166 | None:intergenic | 35.0% |
| !!! | TACGTTTTTTCCCAAAGCGA+AGG | + | chr6_2:57103664-57103683 | None:intergenic | 40.0% |
| TCAGAATTGTAACCTTCCCA+TGG | + | chr6_2:57103702-57103721 | None:intergenic | 40.0% | |
| TGTACTCATTAGTGAACGTC+TGG | - | chr6_2:57103728-57103747 | Msa0921030:CDS | 40.0% | |
| TAGTGATTCTTTCAGGACCA+TGG | + | chr6_2:57103818-57103837 | None:intergenic | 40.0% | |
| ! | AGTAAATGGGCTTCTAGATG+TGG | + | chr6_2:57103849-57103868 | None:intergenic | 40.0% |
| !! | GAATTGTGATTCTGGGATCT+TGG | - | chr6_2:57103889-57103908 | Msa0921030:intron | 40.0% |
| GGGTAAATTAACGCCTCAAA+TGG | - | chr6_2:57103935-57103954 | Msa0921030:intron | 40.0% | |
| TAATCTATCTTCCGGAGCAT+AGG | + | chr6_2:57103973-57103992 | None:intergenic | 40.0% | |
| AAACTACCTATAGGTGGTAG+GGG | - | chr6_2:57104044-57104063 | Msa0921030:CDS | 40.0% | |
| AAAGTAGGTGATAAAGTGGC+CGG | - | chr6_2:57104161-57104180 | Msa0921030:intron | 40.0% | |
| ! | ACCTTTATTTCCATGTCTCC+CGG | + | chr6_2:57104183-57104202 | None:intergenic | 40.0% |
| GGTCTTCCATCTTGCAAATA+AGG | + | chr6_2:57104239-57104258 | None:intergenic | 40.0% | |
| ! | TGGGTTGAAGACCATATCAA+CGG | + | chr6_2:57104261-57104280 | None:intergenic | 40.0% |
| GATATGGTCTTCAACCCATT+AGG | - | chr6_2:57104263-57104282 | Msa0921030:CDS | 40.0% | |
| TATGGTCTTCAACCCATTAG+GGG | - | chr6_2:57104265-57104284 | Msa0921030:CDS | 40.0% | |
| TGTCCTACATTCATTCGTGA+GGG | + | chr6_2:57104293-57104312 | None:intergenic | 40.0% | |
| !! | AATGTTCACTCGGATTAGCT+GGG | - | chr6_2:57104321-57104340 | Msa0921030:CDS | 40.0% |
| TGATGAGAGATATGAACAGG+AGG | - | chr6_2:57104379-57104398 | Msa0921030:CDS | 40.0% | |
| TACTCGGGTTCAAATATCCA+TGG | + | chr6_2:57104461-57104480 | None:intergenic | 40.0% | |
| GATATTTGAACCCGAGTATC+CGG | - | chr6_2:57104463-57104482 | Msa0921030:intron | 40.0% | |
| ATATTTGAACCCGAGTATCC+GGG | - | chr6_2:57104464-57104483 | Msa0921030:intron | 40.0% | |
| TCAAATATTCCGCTCTTTCC+CGG | + | chr6_2:57104485-57104504 | None:intergenic | 40.0% | |
| GGAAAGAGCGGAATATTTGA+TGG | - | chr6_2:57104485-57104504 | Msa0921030:intron | 40.0% | |
| AAAATACATGGACGTTCCAG+TGG | - | chr6_2:57104587-57104606 | Msa0921030:CDS | 40.0% | |
| AACAAGTGCATAATGTCCAC+TGG | + | chr6_2:57104606-57104625 | None:intergenic | 40.0% | |
| GTTACACAACAACCCCTTAA+AGG | - | chr6_2:57104623-57104642 | Msa0921030:CDS | 40.0% | |
| ACAACAACCCCTTAAAGGAA+GGG | - | chr6_2:57104628-57104647 | Msa0921030:CDS | 40.0% | |
| TTGTTTCGCCCTTCCTTTAA+GGG | + | chr6_2:57104639-57104658 | None:intergenic | 40.0% | |
| !! | AAAGCTCGTCAAGAAGTACT+CGG | - | chr6_2:57104758-57104777 | Msa0921030:CDS | 40.0% |
| GTACTCGGAACTACGATTAT+TGG | - | chr6_2:57104773-57104792 | Msa0921030:CDS | 40.0% | |
| ACGAGCAATCGAAAAGATTC+TGG | + | chr6_2:57104827-57104846 | None:intergenic | 40.0% | |
| GGAAGTCTTTCTCAGATACA+AGG | + | chr6_2:57104889-57104908 | None:intergenic | 40.0% | |
| AGACTTCCAGATTCAAAGGA+AGG | - | chr6_2:57104901-57104920 | Msa0921030:intron | 40.0% | |
| GAGAAACTGATCCAATTCGA+AGG | + | chr6_2:57104987-57105006 | None:intergenic | 40.0% | |
| AAAAGTGGGATTTGTGCTTG+TGG | - | chr6_2:57105150-57105169 | Msa0921030:CDS | 40.0% | |
| !!! | TACGTTTTTTCCCAAAGCGA+AGG | + | chr6_2:57103664-57103683 | None:intergenic | 40.0% |
| TCAGAATTGTAACCTTCCCA+TGG | + | chr6_2:57103702-57103721 | None:intergenic | 40.0% | |
| TGTACTCATTAGTGAACGTC+TGG | - | chr6_2:57103728-57103747 | Msa0921030:CDS | 40.0% | |
| TAGTGATTCTTTCAGGACCA+TGG | + | chr6_2:57103818-57103837 | None:intergenic | 40.0% | |
| ! | AGTAAATGGGCTTCTAGATG+TGG | + | chr6_2:57103849-57103868 | None:intergenic | 40.0% |
| !! | GAATTGTGATTCTGGGATCT+TGG | - | chr6_2:57103889-57103908 | Msa0921030:intron | 40.0% |
| GGGTAAATTAACGCCTCAAA+TGG | - | chr6_2:57103935-57103954 | Msa0921030:intron | 40.0% | |
| TAATCTATCTTCCGGAGCAT+AGG | + | chr6_2:57103973-57103992 | None:intergenic | 40.0% | |
| AAACTACCTATAGGTGGTAG+GGG | - | chr6_2:57104044-57104063 | Msa0921030:CDS | 40.0% | |
| AAAGTAGGTGATAAAGTGGC+CGG | - | chr6_2:57104161-57104180 | Msa0921030:intron | 40.0% | |
| ! | ACCTTTATTTCCATGTCTCC+CGG | + | chr6_2:57104183-57104202 | None:intergenic | 40.0% |
| GGTCTTCCATCTTGCAAATA+AGG | + | chr6_2:57104239-57104258 | None:intergenic | 40.0% | |
| ! | TGGGTTGAAGACCATATCAA+CGG | + | chr6_2:57104261-57104280 | None:intergenic | 40.0% |
| GATATGGTCTTCAACCCATT+AGG | - | chr6_2:57104263-57104282 | Msa0921030:CDS | 40.0% | |
| TATGGTCTTCAACCCATTAG+GGG | - | chr6_2:57104265-57104284 | Msa0921030:CDS | 40.0% | |
| TGTCCTACATTCATTCGTGA+GGG | + | chr6_2:57104293-57104312 | None:intergenic | 40.0% | |
| !! | AATGTTCACTCGGATTAGCT+GGG | - | chr6_2:57104321-57104340 | Msa0921030:CDS | 40.0% |
| TGATGAGAGATATGAACAGG+AGG | - | chr6_2:57104379-57104398 | Msa0921030:CDS | 40.0% | |
| TACTCGGGTTCAAATATCCA+TGG | + | chr6_2:57104461-57104480 | None:intergenic | 40.0% | |
| GATATTTGAACCCGAGTATC+CGG | - | chr6_2:57104463-57104482 | Msa0921030:intron | 40.0% | |
| ATATTTGAACCCGAGTATCC+GGG | - | chr6_2:57104464-57104483 | Msa0921030:intron | 40.0% | |
| TCAAATATTCCGCTCTTTCC+CGG | + | chr6_2:57104485-57104504 | None:intergenic | 40.0% | |
| GGAAAGAGCGGAATATTTGA+TGG | - | chr6_2:57104485-57104504 | Msa0921030:intron | 40.0% | |
| AAAATACATGGACGTTCCAG+TGG | - | chr6_2:57104587-57104606 | Msa0921030:CDS | 40.0% | |
| AACAAGTGCATAATGTCCAC+TGG | + | chr6_2:57104606-57104625 | None:intergenic | 40.0% | |
| GTTACACAACAACCCCTTAA+AGG | - | chr6_2:57104623-57104642 | Msa0921030:CDS | 40.0% | |
| ACAACAACCCCTTAAAGGAA+GGG | - | chr6_2:57104628-57104647 | Msa0921030:CDS | 40.0% | |
| TTGTTTCGCCCTTCCTTTAA+GGG | + | chr6_2:57104639-57104658 | None:intergenic | 40.0% | |
| !! | AAAGCTCGTCAAGAAGTACT+CGG | - | chr6_2:57104758-57104777 | Msa0921030:CDS | 40.0% |
| GTACTCGGAACTACGATTAT+TGG | - | chr6_2:57104773-57104792 | Msa0921030:CDS | 40.0% | |
| ACGAGCAATCGAAAAGATTC+TGG | + | chr6_2:57104827-57104846 | None:intergenic | 40.0% | |
| GGAAGTCTTTCTCAGATACA+AGG | + | chr6_2:57104889-57104908 | None:intergenic | 40.0% | |
| AGACTTCCAGATTCAAAGGA+AGG | - | chr6_2:57104901-57104920 | Msa0921030:intron | 40.0% | |
| GAGAAACTGATCCAATTCGA+AGG | + | chr6_2:57104987-57105006 | None:intergenic | 40.0% | |
| AAAAGTGGGATTTGTGCTTG+TGG | - | chr6_2:57105150-57105169 | Msa0921030:CDS | 40.0% | |
| GTAGCTTATATGCCATGGGA+AGG | - | chr6_2:57103687-57103706 | Msa0921030:CDS | 45.0% | |
| TGGGATCTTGGGTAGAAACA+GGG | - | chr6_2:57103901-57103920 | Msa0921030:intron | 45.0% | |
| GAGGATTCTTTCGCCATTTG+AGG | + | chr6_2:57103951-57103970 | None:intergenic | 45.0% | |
| GAAAGAATCCTCCTATGCTC+CGG | - | chr6_2:57103959-57103978 | Msa0921030:intron | 45.0% | |
| ACGAGCTATACTTGGGATTC+AGG | - | chr6_2:57103995-57104014 | Msa0921030:CDS | 45.0% | |
| !! | GATTCAGGTATCGACCTCAA+AGG | - | chr6_2:57104010-57104029 | Msa0921030:CDS | 45.0% |
| GCCGAGTTATTGATGTGAGA+TGG | - | chr6_2:57104066-57104085 | Msa0921030:CDS | 45.0% | |
| AAGTAGGTGATAAAGTGGCC+GGG | - | chr6_2:57104162-57104181 | Msa0921030:intron | 45.0% | |
| AGATGGAAGACCCGTTGATA+TGG | - | chr6_2:57104247-57104266 | Msa0921030:CDS | 45.0% | |
| GGGTTGAAGACCATATCAAC+GGG | + | chr6_2:57104260-57104279 | None:intergenic | 45.0% | |
| GTACCCTCACGAATGAATGT+AGG | - | chr6_2:57104287-57104306 | Msa0921030:CDS | 45.0% | |
| CTGTCCTACATTCATTCGTG+AGG | + | chr6_2:57104294-57104313 | None:intergenic | 45.0% | |
| !! | GAATGTTCACTCGGATTAGC+TGG | - | chr6_2:57104320-57104339 | Msa0921030:CDS | 45.0% |
| CACAACAACCCCTTAAAGGA+AGG | - | chr6_2:57104627-57104646 | Msa0921030:CDS | 45.0% | |
| TGTTTCGCCCTTCCTTTAAG+GGG | + | chr6_2:57104638-57104657 | None:intergenic | 45.0% | |
| CTTGTTTCGCCCTTCCTTTA+AGG | + | chr6_2:57104640-57104659 | None:intergenic | 45.0% | |
| CTTAAAGGAAGGGCGAAACA+AGG | - | chr6_2:57104638-57104657 | Msa0921030:CDS | 45.0% | |
| CTCGGAACTACGATTATTGG+AGG | - | chr6_2:57104776-57104795 | Msa0921030:CDS | 45.0% | |
| ! | TCTGGAGCATCCACATGTTT+AGG | + | chr6_2:57104809-57104828 | None:intergenic | 45.0% |
| CGTTCGAGAACTACGATCTT+TGG | - | chr6_2:57104844-57104863 | Msa0921030:intron | 45.0% | |
| ! | AGAACTACGATCTTTGGCTC+TGG | - | chr6_2:57104850-57104869 | Msa0921030:intron | 45.0% |
| GTAGCTTATATGCCATGGGA+AGG | - | chr6_2:57103687-57103706 | Msa0921030:CDS | 45.0% | |
| TGGGATCTTGGGTAGAAACA+GGG | - | chr6_2:57103901-57103920 | Msa0921030:intron | 45.0% | |
| GAGGATTCTTTCGCCATTTG+AGG | + | chr6_2:57103951-57103970 | None:intergenic | 45.0% | |
| GAAAGAATCCTCCTATGCTC+CGG | - | chr6_2:57103959-57103978 | Msa0921030:intron | 45.0% | |
| ACGAGCTATACTTGGGATTC+AGG | - | chr6_2:57103995-57104014 | Msa0921030:CDS | 45.0% | |
| !! | GATTCAGGTATCGACCTCAA+AGG | - | chr6_2:57104010-57104029 | Msa0921030:CDS | 45.0% |
| GCCGAGTTATTGATGTGAGA+TGG | - | chr6_2:57104066-57104085 | Msa0921030:CDS | 45.0% | |
| AAGTAGGTGATAAAGTGGCC+GGG | - | chr6_2:57104162-57104181 | Msa0921030:intron | 45.0% | |
| AGATGGAAGACCCGTTGATA+TGG | - | chr6_2:57104247-57104266 | Msa0921030:CDS | 45.0% | |
| GGGTTGAAGACCATATCAAC+GGG | + | chr6_2:57104260-57104279 | None:intergenic | 45.0% | |
| GTACCCTCACGAATGAATGT+AGG | - | chr6_2:57104287-57104306 | Msa0921030:CDS | 45.0% | |
| CTGTCCTACATTCATTCGTG+AGG | + | chr6_2:57104294-57104313 | None:intergenic | 45.0% | |
| !! | GAATGTTCACTCGGATTAGC+TGG | - | chr6_2:57104320-57104339 | Msa0921030:CDS | 45.0% |
| CACAACAACCCCTTAAAGGA+AGG | - | chr6_2:57104627-57104646 | Msa0921030:CDS | 45.0% | |
| TGTTTCGCCCTTCCTTTAAG+GGG | + | chr6_2:57104638-57104657 | None:intergenic | 45.0% | |
| CTTGTTTCGCCCTTCCTTTA+AGG | + | chr6_2:57104640-57104659 | None:intergenic | 45.0% | |
| CTTAAAGGAAGGGCGAAACA+AGG | - | chr6_2:57104638-57104657 | Msa0921030:CDS | 45.0% | |
| CTCGGAACTACGATTATTGG+AGG | - | chr6_2:57104776-57104795 | Msa0921030:CDS | 45.0% | |
| ! | TCTGGAGCATCCACATGTTT+AGG | + | chr6_2:57104809-57104828 | None:intergenic | 45.0% |
| CGTTCGAGAACTACGATCTT+TGG | - | chr6_2:57104844-57104863 | Msa0921030:intron | 45.0% | |
| ! | AGAACTACGATCTTTGGCTC+TGG | - | chr6_2:57104850-57104869 | Msa0921030:intron | 45.0% |
| CAGACTCATGTGACAAGCCA+TGG | - | chr6_2:57103798-57103817 | Msa0921030:CDS | 50.0% | |
| CTGGGATCTTGGGTAGAAAC+AGG | - | chr6_2:57103900-57103919 | Msa0921030:intron | 50.0% | |
| GGGATCTTGGGTAGAAACAG+GGG | - | chr6_2:57103902-57103921 | Msa0921030:intron | 50.0% | |
| TCTATCTTCCGGAGCATAGG+AGG | + | chr6_2:57103970-57103989 | None:intergenic | 50.0% | |
| GCCGGGAGACATGGAAATAA+AGG | - | chr6_2:57104179-57104198 | Msa0921030:CDS | 50.0% | |
| !! | TTCGTGAGGGTACCCCTAAT+GGG | + | chr6_2:57104280-57104299 | None:intergenic | 50.0% |
| !! | ATTCGTGAGGGTACCCCTAA+TGG | + | chr6_2:57104281-57104300 | None:intergenic | 50.0% |
| AAAGGAAGGGCGAAACAAGG+AGG | - | chr6_2:57104641-57104660 | Msa0921030:CDS | 50.0% | |
| AAACAAGGAGGACAACGGGT+AGG | - | chr6_2:57104653-57104672 | Msa0921030:intron | 50.0% | |
| GGTAGGCGAAATGGAGGTTT+GGG | - | chr6_2:57104670-57104689 | Msa0921030:intron | 50.0% | |
| CAGACTCATGTGACAAGCCA+TGG | - | chr6_2:57103798-57103817 | Msa0921030:CDS | 50.0% | |
| CTGGGATCTTGGGTAGAAAC+AGG | - | chr6_2:57103900-57103919 | Msa0921030:intron | 50.0% | |
| GGGATCTTGGGTAGAAACAG+GGG | - | chr6_2:57103902-57103921 | Msa0921030:intron | 50.0% | |
| TCTATCTTCCGGAGCATAGG+AGG | + | chr6_2:57103970-57103989 | None:intergenic | 50.0% | |
| GCCGGGAGACATGGAAATAA+AGG | - | chr6_2:57104179-57104198 | Msa0921030:CDS | 50.0% | |
| !! | TTCGTGAGGGTACCCCTAAT+GGG | + | chr6_2:57104280-57104299 | None:intergenic | 50.0% |
| !! | ATTCGTGAGGGTACCCCTAA+TGG | + | chr6_2:57104281-57104300 | None:intergenic | 50.0% |
| AAAGGAAGGGCGAAACAAGG+AGG | - | chr6_2:57104641-57104660 | Msa0921030:CDS | 50.0% | |
| AAACAAGGAGGACAACGGGT+AGG | - | chr6_2:57104653-57104672 | Msa0921030:intron | 50.0% | |
| GGTAGGCGAAATGGAGGTTT+GGG | - | chr6_2:57104670-57104689 | Msa0921030:intron | 50.0% | |
| GATAAAGTGGCCGGGAGACA+TGG | - | chr6_2:57104170-57104189 | Msa0921030:CDS | 55.0% | |
| TCCGCTCTTTCCCGGATACT+CGG | + | chr6_2:57104477-57104496 | None:intergenic | 55.0% | |
| GGGCGAAACAAGGAGGACAA+CGG | - | chr6_2:57104648-57104667 | Msa0921030:CDS | 55.0% | |
| GGCGAAACAAGGAGGACAAC+GGG | - | chr6_2:57104649-57104668 | Msa0921030:CDS | 55.0% | |
| AGGACAACGGGTAGGCGAAA+TGG | - | chr6_2:57104661-57104680 | Msa0921030:intron | 55.0% | |
| ACAACGGGTAGGCGAAATGG+AGG | - | chr6_2:57104664-57104683 | Msa0921030:intron | 55.0% | |
| GGGTAGGCGAAATGGAGGTT+TGG | - | chr6_2:57104669-57104688 | Msa0921030:intron | 55.0% | |
| GATAAAGTGGCCGGGAGACA+TGG | - | chr6_2:57104170-57104189 | Msa0921030:CDS | 55.0% | |
| TCCGCTCTTTCCCGGATACT+CGG | + | chr6_2:57104477-57104496 | None:intergenic | 55.0% | |
| GGGCGAAACAAGGAGGACAA+CGG | - | chr6_2:57104648-57104667 | Msa0921030:CDS | 55.0% | |
| GGCGAAACAAGGAGGACAAC+GGG | - | chr6_2:57104649-57104668 | Msa0921030:CDS | 55.0% | |
| AGGACAACGGGTAGGCGAAA+TGG | - | chr6_2:57104661-57104680 | Msa0921030:intron | 55.0% | |
| ACAACGGGTAGGCGAAATGG+AGG | - | chr6_2:57104664-57104683 | Msa0921030:intron | 55.0% | |
| GGGTAGGCGAAATGGAGGTT+TGG | - | chr6_2:57104669-57104688 | Msa0921030:intron | 55.0% | |
| ACTCGGCCCCTACCACCTAT+AGG | + | chr6_2:57104053-57104072 | None:intergenic | 60.0% | |
| CCGCTCTTTCCCGGATACTC+GGG | + | chr6_2:57104476-57104495 | None:intergenic | 60.0% | |
| CCCGAGTATCCGGGAAAGAG+CGG | - | chr6_2:57104473-57104492 | Msa0921030:intron | 60.0% | |
| AATGGAGGTTTGGGCGCTCG+AGG | - | chr6_2:57104679-57104698 | Msa0921030:intron | 60.0% | |
| ATGGAGGTTTGGGCGCTCGA+GGG | - | chr6_2:57104680-57104699 | Msa0921030:intron | 60.0% | |
| ACTCGGCCCCTACCACCTAT+AGG | + | chr6_2:57104053-57104072 | None:intergenic | 60.0% | |
| CCGCTCTTTCCCGGATACTC+GGG | + | chr6_2:57104476-57104495 | None:intergenic | 60.0% | |
| CCCGAGTATCCGGGAAAGAG+CGG | - | chr6_2:57104473-57104492 | Msa0921030:intron | 60.0% | |
| AATGGAGGTTTGGGCGCTCG+AGG | - | chr6_2:57104679-57104698 | Msa0921030:intron | 60.0% | |
| ATGGAGGTTTGGGCGCTCGA+GGG | - | chr6_2:57104680-57104699 | Msa0921030:intron | 60.0% | |
| TGGAGGTTTGGGCGCTCGAG+GGG | - | chr6_2:57104681-57104700 | Msa0921030:intron | 65.0% | |
| GTTTGGGCGCTCGAGGGGTT+CGG | - | chr6_2:57104686-57104705 | Msa0921030:intron | 65.0% | |
| TGGAGGTTTGGGCGCTCGAG+GGG | - | chr6_2:57104681-57104700 | Msa0921030:intron | 65.0% | |
| GTTTGGGCGCTCGAGGGGTT+CGG | - | chr6_2:57104686-57104705 | Msa0921030:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 57103657 | 57105182 | 57103657 | ID=Msa0921030;Name=Msa0921030 |
| chr6_2 | mRNA | 57103657 | 57105182 | 57103657 | ID=Msa0921030-mRNA-1;Parent=Msa0921030;Name=Msa0921030-mRNA-1;_AED=0.18;_eAED=0.19;_QI=0|0|0|1|0|0|6|0|385 |
| chr6_2 | exon | 57104946 | 57105182 | 57104946 | ID=Msa0921030-mRNA-1:exon:8580;Parent=Msa0921030-mRNA-1 |
| chr6_2 | exon | 57104687 | 57104822 | 57104687 | ID=Msa0921030-mRNA-1:exon:8579;Parent=Msa0921030-mRNA-1 |
| chr6_2 | exon | 57104495 | 57104671 | 57104495 | ID=Msa0921030-mRNA-1:exon:8578;Parent=Msa0921030-mRNA-1 |
| chr6_2 | exon | 57104169 | 57104401 | 57104169 | ID=Msa0921030-mRNA-1:exon:8577;Parent=Msa0921030-mRNA-1 |
| chr6_2 | exon | 57103995 | 57104153 | 57103995 | ID=Msa0921030-mRNA-1:exon:8576;Parent=Msa0921030-mRNA-1 |
| chr6_2 | exon | 57103657 | 57103869 | 57103657 | ID=Msa0921030-mRNA-1:exon:8575;Parent=Msa0921030-mRNA-1 |
| chr6_2 | CDS | 57104946 | 57105182 | 57104946 | ID=Msa0921030-mRNA-1:cds;Parent=Msa0921030-mRNA-1 |
| chr6_2 | CDS | 57104687 | 57104822 | 57104687 | ID=Msa0921030-mRNA-1:cds;Parent=Msa0921030-mRNA-1 |
| chr6_2 | CDS | 57104495 | 57104671 | 57104495 | ID=Msa0921030-mRNA-1:cds;Parent=Msa0921030-mRNA-1 |
| chr6_2 | CDS | 57104169 | 57104401 | 57104169 | ID=Msa0921030-mRNA-1:cds;Parent=Msa0921030-mRNA-1 |
| chr6_2 | CDS | 57103995 | 57104153 | 57103995 | ID=Msa0921030-mRNA-1:cds;Parent=Msa0921030-mRNA-1 |
| chr6_2 | CDS | 57103657 | 57103869 | 57103657 | ID=Msa0921030-mRNA-1:cds;Parent=Msa0921030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
