Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0582790 | AWW91873.1 | 100.000 | 1075 | 0 | 0 | 1 | 1075 | 1 | 1075 | 0.0 | 2211 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0582790 | sp|Q9BBS9|RPOB_LOTJA | 93.458 | 1070 | 70 | 0 | 6 | 1075 | 1 | 1070 | 0.0 | 2076 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0582790 | A0A2Z4KH34 | 100.000 | 1075 | 0 | 0 | 1 | 1075 | 1 | 1075 | 0.0 | 2211 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0095210 | Msa0582790 | 0.804656 | 1.945586e-49 | -8.615850e-47 |
| Msa0095220 | Msa0582790 | 0.818680 | 1.727034e-52 | -8.615850e-47 |
| Msa0095230 | Msa0582790 | 0.819748 | 9.870380e-53 | -8.615850e-47 |
| Msa0095280 | Msa0582790 | 0.803682 | 3.101875e-49 | -8.615850e-47 |
| Msa0139770 | Msa0582790 | 0.807198 | 5.683342e-50 | -8.615850e-47 |
| Msa0139790 | Msa0582790 | 0.903449 | 3.430094e-79 | -8.615850e-47 |
| Msa0139800 | Msa0582790 | 0.804851 | 1.771158e-49 | -8.615850e-47 |
| Msa0139810 | Msa0582790 | 0.816038 | 6.795887e-52 | -8.615850e-47 |
| Msa0139830 | Msa0582790 | 0.847204 | 1.340591e-59 | -8.615850e-47 |
| Msa0173880 | Msa0582790 | 0.814845 | 1.252201e-51 | -8.615850e-47 |
| Msa0202640 | Msa0582790 | 0.809315 | 2.010427e-50 | -8.615850e-47 |
| Msa0268190 | Msa0582790 | 0.814841 | 1.254472e-51 | -8.615850e-47 |
| Msa0268200 | Msa0582790 | 0.806454 | 8.161611e-50 | -8.615850e-47 |
| Msa0268210 | Msa0582790 | 0.801735 | 7.827724e-49 | -8.615850e-47 |
| Msa0268350 | Msa0582790 | 0.830827 | 2.358613e-55 | -8.615850e-47 |
| Msa0268430 | Msa0582790 | 0.818469 | 1.928629e-52 | -8.615850e-47 |
| Msa0268520 | Msa0582790 | 0.802297 | 5.998548e-49 | -8.615850e-47 |
| Msa0268570 | Msa0582790 | 0.829730 | 4.371090e-55 | -8.615850e-47 |
| Msa0268590 | Msa0582790 | 0.891406 | 4.089201e-74 | -8.615850e-47 |
| Msa0268610 | Msa0582790 | 0.872390 | 3.299724e-67 | -8.615850e-47 |
| Msa0268670 | Msa0582790 | 0.813237 | 2.833299e-51 | -8.615850e-47 |
| Msa0268750 | Msa0582790 | 0.830878 | 2.291626e-55 | -8.615850e-47 |
| Msa0268820 | Msa0582790 | 0.869682 | 2.578226e-66 | -8.615850e-47 |
| Msa0268860 | Msa0582790 | 0.810789 | 9.679969e-51 | -8.615850e-47 |
| Msa0268880 | Msa0582790 | 0.805918 | 1.058403e-49 | -8.615850e-47 |
| Msa0268910 | Msa0582790 | 0.804915 | 1.717214e-49 | -8.615850e-47 |
| Msa0268920 | Msa0582790 | 0.813807 | 2.123612e-51 | -8.615850e-47 |
| Msa0268990 | Msa0582790 | 0.817039 | 4.054329e-52 | -8.615850e-47 |
| Msa0269030 | Msa0582790 | 0.811831 | 5.749358e-51 | -8.615850e-47 |
| Msa0269070 | Msa0582790 | 0.820382 | 7.065341e-53 | -8.615850e-47 |
| Msa0269090 | Msa0582790 | 0.840243 | 9.775073e-58 | -8.615850e-47 |
| Msa0344130 | Msa0582790 | 0.803452 | 3.463323e-49 | -8.615850e-47 |
| Msa0344150 | Msa0582790 | 0.812772 | 3.582807e-51 | -8.615850e-47 |
| Msa0344210 | Msa0582790 | 0.800720 | 1.262305e-48 | -8.615850e-47 |
| Msa0344260 | Msa0582790 | 0.811410 | 7.098668e-51 | -8.615850e-47 |
| Msa0344280 | Msa0582790 | 0.818514 | 1.883973e-52 | -8.615850e-47 |
| Msa0344320 | Msa0582790 | 0.835413 | 1.702929e-56 | -8.615850e-47 |
| Msa0484000 | Msa0582790 | 0.863724 | 2.028998e-64 | -8.615850e-47 |
| Msa0582500 | Msa0582790 | 0.906158 | 2.000769e-80 | -8.615850e-47 |
| Msa0582540 | Msa0582790 | 0.813423 | 2.579172e-51 | -8.615850e-47 |
| Msa0582590 | Msa0582790 | 0.801887 | 7.282571e-49 | -8.615850e-47 |
| Msa0582610 | Msa0582790 | 0.820673 | 6.057365e-53 | -8.615850e-47 |
| Msa0582650 | Msa0582790 | 0.840228 | 9.867132e-58 | -8.615850e-47 |
| Msa0582670 | Msa0582790 | 0.925544 | 1.590013e-90 | -8.615850e-47 |
| Msa0582680 | Msa0582790 | 0.914465 | 1.857661e-84 | -8.615850e-47 |
| Msa0582770 | Msa0582790 | 0.824889 | 6.318529e-54 | -8.615850e-47 |
| Msa0582790 | Msa0582800 | 0.894338 | 2.707811e-75 | -8.615850e-47 |
| Msa0582790 | Msa0582840 | 0.809564 | 1.777854e-50 | -8.615850e-47 |
| Msa0582790 | Msa0582850 | 0.800189 | 1.619639e-48 | -8.615850e-47 |
| Msa0582790 | Msa0582890 | 0.820762 | 5.780268e-53 | -8.615850e-47 |
| Msa0582790 | Msa0582920 | 0.830880 | 2.288248e-55 | -8.615850e-47 |
| Msa0582790 | Msa0921030 | 0.820184 | 7.844178e-53 | -8.615850e-47 |
| Msa0582790 | Msa0924850 | 0.802776 | 4.778640e-49 | -8.615850e-47 |
| Msa0582790 | Msa0924880 | 0.822670 | 2.091980e-53 | -8.615850e-47 |
| Msa0582790 | Msa0924990 | 0.816636 | 4.991946e-52 | -8.615850e-47 |
| Msa0582790 | Msa0931050 | 0.808324 | 3.275037e-50 | -8.615850e-47 |
| Msa0582790 | Msa0931060 | 0.848914 | 4.523690e-60 | -8.615850e-47 |
| Msa0582790 | Msa0931110 | 0.811798 | 5.847314e-51 | -8.615850e-47 |
| Msa0582790 | Msa0931120 | 0.903218 | 4.354363e-79 | -8.615850e-47 |
| Msa0582790 | Msa0931160 | 0.812904 | 3.352402e-51 | -8.615850e-47 |
| Msa0582790 | Msa0931180 | 0.824070 | 9.848044e-54 | -8.615850e-47 |
| Msa0582790 | Msa0931230 | 0.829162 | 6.007741e-55 | -8.615850e-47 |
| Msa0582790 | Msa0931250 | 0.901747 | 1.959461e-78 | -8.615850e-47 |
| Msa0582790 | Msa0983700 | 0.802735 | 4.872063e-49 | -8.615850e-47 |
| Msa0582790 | Msa1086030 | 0.818861 | 1.571330e-52 | -8.615850e-47 |
| Msa0582790 | Msa1086040 | 0.807344 | 5.291737e-50 | -8.615850e-47 |
| Msa0582790 | Msa1086090 | 0.826271 | 2.972796e-54 | -8.615850e-47 |
| Msa0582790 | Msa1086110 | 0.909722 | 4.160844e-82 | -8.615850e-47 |
| Msa0582790 | Msa1086130 | 0.872924 | 2.187543e-67 | -8.615850e-47 |
| Msa0582790 | Msa1086200 | 0.825974 | 3.498722e-54 | -8.615850e-47 |
| Msa0582790 | Msa1086220 | 0.878261 | 3.241201e-69 | -8.615850e-47 |
| Msa0582790 | Msa1086240 | 0.888230 | 7.096177e-73 | -8.615850e-47 |
| Msa0582790 | Msa1086250 | 0.807265 | 5.500831e-50 | -8.615850e-47 |
| Msa0582790 | Msa1086300 | 0.800866 | 1.179008e-48 | -8.615850e-47 |
| Msa0582790 | Msa1086320 | 0.815903 | 7.281918e-52 | -8.615850e-47 |
| Msa0582790 | Msa1086450 | 0.808683 | 2.745346e-50 | -8.615850e-47 |
| Msa0582790 | Msa1086500 | 0.805835 | 1.101888e-49 | -8.615850e-47 |
| Msa0582790 | Msa1086510 | 0.801273 | 9.732102e-49 | -8.615850e-47 |
| Msa0582790 | Msa1086660 | 0.807697 | 4.453941e-50 | -8.615850e-47 |
| Msa0582790 | Msa1086670 | 0.820564 | 6.416058e-53 | -8.615850e-47 |
| Msa0582790 | Msa1086860 | 0.828803 | 7.339534e-55 | -8.615850e-47 |
| Msa0582790 | Msa1086900 | 0.846351 | 2.294304e-59 | -8.615850e-47 |
| Msa0582790 | Msa1086930 | 0.873273 | 1.671214e-67 | -8.615850e-47 |
| Msa0582790 | Msa1091700 | 0.805303 | 1.424606e-49 | -8.615850e-47 |
| Msa0582790 | Msa1143110 | 0.834841 | 2.374057e-56 | -8.615850e-47 |
| Msa0582790 | Msa1143170 | 0.821845 | 3.251002e-53 | -8.615850e-47 |
| Msa0582790 | Msa1143190 | 0.906598 | 1.250001e-80 | -8.615850e-47 |
| Msa0582790 | Msa1305100 | 0.877459 | 6.181073e-69 | -8.615850e-47 |
| Msa0582790 | Msa1305150 | 0.833291 | 5.801437e-56 | -8.615850e-47 |
| Msa0582790 | Msa1342050 | 0.813498 | 2.482867e-51 | -8.615850e-47 |
| Msa0582790 | Msa1354320 | 0.801521 | 8.658500e-49 | -8.615850e-47 |
| Msa0582790 | Msa1354380 | 0.802437 | 5.612773e-49 | -8.615850e-47 |
| Msa0582790 | Msa1354860 | 0.809755 | 1.617839e-50 | -8.615850e-47 |
| Msa0582790 | Msa1354880 | 0.802003 | 6.894073e-49 | -8.615850e-47 |
| Msa0582790 | Msa1354920 | 0.820761 | 5.783257e-53 | -8.615850e-47 |
| Msa0582790 | Msa1354940 | 0.908327 | 1.930738e-81 | -8.615850e-47 |
| Msa0582790 | Msa1355030 | 0.806019 | 1.007922e-49 | -8.615850e-47 |
| Msa0582790 | Msa1355090 | 0.830160 | 3.434701e-55 | -8.615850e-47 |
| Msa0582790 | Msa1355110 | 0.854382 | 1.277876e-61 | -8.615850e-47 |
| Msa0582790 | Msa1355120 | 0.809265 | 2.060804e-50 | -8.615850e-47 |
| Msa0582790 | Msa1368310 | 0.813859 | 2.067972e-51 | -8.615850e-47 |
| Msa0582790 | Msa1380550 | 0.811856 | 5.679861e-51 | -8.615850e-47 |
| Msa0582790 | Msa1380560 | 0.805704 | 1.173901e-49 | -8.615850e-47 |
| Msa0582790 | Msa1380570 | 0.801165 | 1.024147e-48 | -8.615850e-47 |
| Msa0582790 | Msa1380610 | 0.817638 | 2.973041e-52 | -8.615850e-47 |
| Msa0582790 | Msa1380630 | 0.895738 | 7.202471e-76 | -8.615850e-47 |
| Msa0582790 | Msa1380670 | 0.830333 | 3.115734e-55 | -8.615850e-47 |
| Msa0582790 | Msa1380690 | 0.815718 | 8.009427e-52 | -8.615850e-47 |
| Msa0582790 | Msa1380700 | 0.915258 | 7.284275e-85 | -8.615850e-47 |
| Msa0582790 | Msa1394120 | 0.812578 | 3.950708e-51 | -8.615850e-47 |
| Msa0582790 | Msa1394160 | 0.819609 | 1.061890e-52 | -8.615850e-47 |
| Msa0582790 | Msa1394250 | 0.811155 | 8.062464e-51 | -8.615850e-47 |
| Msa0582790 | Msa1394270 | 0.804758 | 1.851958e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0582790 | MtrunA17_Chr4g0016641 | 99.349 | 1075 | 7 | 0 | 1 | 1075 | 1 | 1075 | 0.0 | 2194 |
| Msa0582790 | MtrunA17_CPg0493041 | 99.349 | 1075 | 7 | 0 | 1 | 1075 | 1 | 1075 | 0.0 | 2194 |
| Msa0582790 | MtrunA17_Chr4g0015531 | 78.804 | 368 | 4 | 3 | 301 | 668 | 1 | 294 | 0.0 | 562 |
| Msa0582790 | MtrunA17_Chr1g0159041 | 66.279 | 430 | 37 | 3 | 471 | 900 | 1 | 322 | 0.0 | 538 |
| Msa0582790 | MtrunA17_Chr4g0015541 | 87.619 | 210 | 2 | 1 | 866 | 1075 | 1 | 186 | 6.54e-118 | 365 |
| Msa0582790 | MtrunA17_Chr4g0015521 | 98.165 | 109 | 2 | 0 | 112 | 220 | 1 | 109 | 2.94e-66 | 218 |
| Msa0582790 | MtrunA17_Chr1g0159051 | 94.286 | 105 | 6 | 0 | 274 | 378 | 12 | 116 | 2.63e-62 | 207 |
| Msa0582790 | MtrunA17_Chr7g0247561 | 96.154 | 78 | 3 | 0 | 625 | 702 | 1 | 78 | 3.56e-47 | 162 |
| Msa0582790 | MtrunA17_Chr8g0345421 | 28.673 | 422 | 257 | 9 | 653 | 1056 | 728 | 1123 | 1.93e-36 | 149 |
| Msa0582790 | MtrunA17_Chr1g0155911 | 26.829 | 369 | 235 | 6 | 653 | 1016 | 782 | 1120 | 4.66e-35 | 145 |
| Msa0582790 | MtrunA17_Chr3g0136911 | 24.704 | 506 | 299 | 15 | 587 | 1058 | 724 | 1181 | 5.03e-28 | 122 |
| Msa0582790 | MtrunA17_Chr8g0375171 | 25.292 | 514 | 301 | 17 | 580 | 1058 | 714 | 1179 | 9.38e-28 | 121 |
| Msa0582790 | MtrunA17_Chr4g0069391 | 25.635 | 394 | 251 | 9 | 653 | 1041 | 786 | 1142 | 4.85e-27 | 119 |
| Msa0582790 | MtrunA17_Chr3g0142431 | 27.381 | 252 | 146 | 6 | 829 | 1058 | 2 | 238 | 8.04e-18 | 84.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0582790 | ATCG00190.1 | 89.646 | 1072 | 109 | 1 | 6 | 1075 | 1 | 1072 | 0.0 | 1996 |
| Msa0582790 | AT4G21710.1 | 26.651 | 424 | 261 | 8 | 653 | 1056 | 779 | 1172 | 3.33e-37 | 152 |
| Msa0582790 | AT5G45140.2 | 27.553 | 421 | 262 | 8 | 653 | 1054 | 754 | 1150 | 1.39e-34 | 144 |
| Msa0582790 | AT5G45140.1 | 27.553 | 421 | 262 | 8 | 653 | 1054 | 754 | 1150 | 1.39e-34 | 144 |
| Msa0582790 | AT1G29940.1 | 27.200 | 375 | 220 | 12 | 657 | 1017 | 756 | 1091 | 1.52e-25 | 115 |
| Msa0582790 | AT3G23780.1 | 24.263 | 441 | 253 | 10 | 657 | 1059 | 769 | 1166 | 5.44e-25 | 113 |
| Msa0582790 | AT3G23780.2 | 24.263 | 441 | 253 | 10 | 657 | 1059 | 769 | 1166 | 5.44e-25 | 113 |
| Msa0582790 | AT3G18090.1 | 24.194 | 434 | 263 | 9 | 657 | 1059 | 651 | 1049 | 1.85e-24 | 111 |
| Msa0582790 | AT3G18090.2 | 24.444 | 225 | 137 | 3 | 657 | 876 | 651 | 847 | 5.35e-13 | 73.9 |
| Msa0582790 | AT3G18090.3 | 24.444 | 225 | 137 | 3 | 657 | 876 | 651 | 847 | 7.64e-13 | 73.6 |
Find 246 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGGAGAAAATTGAGTTATT+TGG | 0.135693 | 4_2:-1205031 | Msa0582790:CDS |
| TGTCTAAATTTCGGAGTAAA+TGG | 0.137285 | 4_2:+1204056 | None:intergenic |
| CATTTGATTGGAATGAAATT+TGG | 0.153768 | 4_2:-1205324 | Msa0582790:CDS |
| CTTGTTTCGCCCTTCCTTTA+AGG | 0.204769 | 4_2:+1203279 | None:intergenic |
| ATATATCCGCGGGATTAATT+TGG | 0.209384 | 4_2:-1205956 | Msa0582790:CDS |
| GTTACACAACAACCCCTTAA+AGG | 0.212213 | 4_2:-1203293 | Msa0582790:CDS |
| TTTCAACAAAGATGTGAATT+AGG | 0.219138 | 4_2:-1205444 | Msa0582790:CDS |
| TGGATTCGATGTTTGTTTAC+TGG | 0.222331 | 4_2:+1203478 | None:intergenic |
| ATATATATATGAATCGTTTC+TGG | 0.228166 | 4_2:+1203797 | None:intergenic |
| CTGGGAACTTCTATAGTAAA+TGG | 0.231551 | 4_2:-1205870 | Msa0582790:CDS |
| ACATAAAGATTCAGGAAATA+TGG | 0.234879 | 4_2:+1205488 | None:intergenic |
| GTCAAAAGAAAATGCCATTT+TGG | 0.238441 | 4_2:-1205547 | Msa0582790:CDS |
| GAACGTTGATATCTAATTAA+TGG | 0.244746 | 4_2:+1204379 | None:intergenic |
| TTTGAACAGCCTGTTATAAT+AGG | 0.245428 | 4_2:-1203392 | Msa0582790:CDS |
| TGAATTAATTTCAAGATATA+AGG | 0.248171 | 4_2:+1203365 | None:intergenic |
| TTGATAGAAAAGCAAGGATA+TGG | 0.252693 | 4_2:-1205713 | Msa0582790:CDS |
| GGAATCAATGTAGGACTTAT+TGG | 0.263649 | 4_2:-1204913 | Msa0582790:CDS |
| ACGAGCTATACTTGGGATTC+AGG | 0.269809 | 4_2:-1203921 | Msa0582790:CDS |
| AGCACTGAATCGAGGTATTC+AGG | 0.270037 | 4_2:-1204743 | Msa0582790:CDS |
| GATCTATTACAAGATCAATT+TGG | 0.270369 | 4_2:-1205243 | Msa0582790:CDS |
| GATTCATAAGTGGTTGTTAA+TGG | 0.270524 | 4_2:+1205120 | None:intergenic |
| CGATCTAAAACTTGAGATAA+TGG | 0.281648 | 4_2:+1205081 | None:intergenic |
| GGTCTTCCATCTTGCAAATA+AGG | 0.291965 | 4_2:+1203680 | None:intergenic |
| TTGTTTCGCCCTTCCTTTAA+GGG | 0.292882 | 4_2:+1203280 | None:intergenic |
| ATAATTCGAGGAACTATATC+TGG | 0.305120 | 4_2:-1205195 | Msa0582790:CDS |
| GCATCATTATGCTCGATAAA+AGG | 0.305503 | 4_2:+1204604 | None:intergenic |
| ATTCGTGAGGGTACCCCTAA+TGG | 0.306675 | 4_2:+1203638 | None:intergenic |
| GGGAGAAAATTGAGTTATTT+GGG | 0.307341 | 4_2:-1205030 | Msa0582790:CDS |
| TCAAATATTCCGCTCTTTCC+CGG | 0.314064 | 4_2:+1203434 | None:intergenic |
| AATTCCGTACATAAAGATTC+AGG | 0.323867 | 4_2:+1205480 | None:intergenic |
| CGCCAAGTGGCCTTAGATTC+AGG | 0.326928 | 4_2:-1204493 | Msa0582790:CDS |
| TGTTGGCGGTGAACTCGCTT+TGG | 0.329325 | 4_2:-1204266 | Msa0582790:CDS |
| CGCATTTACCTTTATGAACC+TGG | 0.329782 | 4_2:+1204326 | None:intergenic |
| AACGATCTTTCCTGCGTGTT+CGG | 0.330632 | 4_2:+1204456 | None:intergenic |
| GGAATATTTGATGGAAGAAC+AGG | 0.334674 | 4_2:-1203422 | Msa0582790:CDS |
| AATGAATGTAGGACAGATAT+TGG | 0.340082 | 4_2:-1203618 | Msa0582790:CDS |
| AAACTTCCTTCCTTTGAATC+TGG | 0.340714 | 4_2:+1203009 | None:intergenic |
| TCTGGAGCATCCACAGGTTT+AGG | 0.340865 | 4_2:+1203110 | None:intergenic |
| TCACGCAAGGATTGGTCCTT+GGG | 0.341088 | 4_2:-1204878 | Msa0582790:CDS |
| ACGAGCAATCGAAAAGATTC+TGG | 0.342745 | 4_2:+1203092 | None:intergenic |
| ATATGGTCTTCAACCCATTA+GGG | 0.343228 | 4_2:-1203652 | Msa0582790:CDS |
| GTCAAGCAGTTCCTCTTTCT+CGG | 0.344262 | 4_2:-1204549 | Msa0582790:CDS |
| CTGGGATCTTGGGTAGAAAC+AGG | 0.344385 | 4_2:-1204016 | Msa0582790:CDS |
| TCAGTCTTCGGTTCATATTT+CGG | 0.349155 | 4_2:+1205409 | None:intergenic |
| AAATTGTATTTGATTTAATC+CGG | 0.349804 | 4_2:+1206160 | None:intergenic |
| CCATGAACTATTTGGGTCAA+TGG | 0.354074 | 4_2:+1205051 | None:intergenic |
| GTACTCGGAACTACGATTAT+TGG | 0.356639 | 4_2:-1203143 | Msa0582790:CDS |
| CGGTCCGAAAAGTGCATTGT+TGG | 0.359288 | 4_2:-1204529 | Msa0582790:CDS |
| AGCGGGAACTCCTGAATCTA+AGG | 0.364603 | 4_2:+1204483 | None:intergenic |
| CGTTCGAGAACTACGATCTT+TGG | 0.364953 | 4_2:-1203072 | Msa0582790:CDS |
| TATGCTCGATAAAAGGAATC+AGG | 0.367331 | 4_2:+1204611 | None:intergenic |
| TTGTCGATAAAACTCCAAAA+TGG | 0.374690 | 4_2:+1205533 | None:intergenic |
| TCCGCTCTTTCCCGGATACT+CGG | 0.379405 | 4_2:+1203442 | None:intergenic |
| TTGGGTCCTGGAGGATTGAC+GGG | 0.382208 | 4_2:-1205012 | Msa0582790:CDS |
| GAATGTTCACTCGGATTAGC+TGG | 0.386652 | 4_2:-1203596 | Msa0582790:CDS |
| TGGGGAAATTGAAAATGCTT+GGG | 0.386996 | 4_2:-1206211 | Msa0582790:CDS |
| ACAGCTGCGGATCATTTGAT+TGG | 0.389432 | 4_2:-1205336 | Msa0582790:CDS |
| GATATTTGAACCCGAGTATC+CGG | 0.389575 | 4_2:-1203453 | Msa0582790:CDS |
| AATTGAAAATGCTTGGGGTT+GGG | 0.394420 | 4_2:-1206205 | Msa0582790:CDS |
| GATATGGTCTTCAACCCATT+AGG | 0.395616 | 4_2:-1203653 | Msa0582790:CDS |
| GTTTGGGCGCTCGAGGGGTT+CGG | 0.396040 | 4_2:-1203230 | Msa0582790:CDS |
| GTTGGCGGTGAACTCGCTTT+GGG | 0.396452 | 4_2:-1204265 | Msa0582790:CDS |
| AGATGGAAGACCCGTTGATA+TGG | 0.398344 | 4_2:-1203669 | Msa0582790:CDS |
| ATTCCTTCCGAGGTGTCAAT+TGG | 0.403361 | 4_2:+1204931 | None:intergenic |
| AGATTATTACGAGCTATACT+TGG | 0.409704 | 4_2:-1203929 | Msa0582790:CDS |
| TGTAGGACTTATTGGATCCT+TGG | 0.411030 | 4_2:-1204905 | Msa0582790:CDS |
| TCTAACTATTGCATGGGAAC+AGG | 0.414074 | 4_2:-1204683 | Msa0582790:CDS |
| GAAAAGTGCATTGTTGGAAC+TGG | 0.419529 | 4_2:-1204523 | Msa0582790:CDS |
| TTCACGCAAGGATTGGTCCT+TGG | 0.420745 | 4_2:-1204879 | Msa0582790:CDS |
| CATTCCTCTAATGAATTCCC+TGG | 0.423604 | 4_2:-1205889 | Msa0582790:CDS |
| TTTGGGTCCTGGAGGATTGA+CGG | 0.423824 | 4_2:-1205013 | Msa0582790:CDS |
| ATGGGGAAATTGAAAATGCT+TGG | 0.425882 | 4_2:-1206212 | Msa0582790:CDS |
| GAATTGTGATTCTGGGATCT+TGG | 0.426630 | 4_2:-1204027 | Msa0582790:CDS |
| ATGGAGGTTTGGGCGCTCGA+GGG | 0.426714 | 4_2:-1203236 | Msa0582790:CDS |
| GTCTAAATTTCGGAGTAAAT+GGG | 0.428736 | 4_2:+1204057 | None:intergenic |
| TATGTCTTTCCTCAATGAAA+AGG | 0.429238 | 4_2:-1205586 | Msa0582790:CDS |
| AACTATTTGGGTCAATGGAT+TGG | 0.429624 | 4_2:+1205056 | None:intergenic |
| GCCGGGAGACATGGAAATAA+AGG | 0.429982 | 4_2:-1203737 | Msa0582790:CDS |
| GTATATCAATGTTCAGTCTT+CGG | 0.430453 | 4_2:+1205397 | None:intergenic |
| CCATTGACCCAAATAGTTCA+TGG | 0.431227 | 4_2:-1205051 | Msa0582790:CDS |
| AAGTAGAGATGAATACTATA+TGG | 0.431841 | 4_2:-1204785 | Msa0582790:CDS |
| TTCGTGAGGGTACCCCTAAT+GGG | 0.434009 | 4_2:+1203639 | None:intergenic |
| ATTATAACAGGCTGTTCAAA+AGG | 0.436541 | 4_2:+1203395 | None:intergenic |
| AGGACAACGGGTAGGCGAAA+TGG | 0.436703 | 4_2:-1203255 | Msa0582790:CDS |
| ACTTGTCTAAAACTACCTAT+AGG | 0.437083 | 4_2:-1203881 | Msa0582790:CDS |
| ATGCTTGGGGTTGGGAATGA+AGG | 0.438598 | 4_2:-1206197 | Msa0582790:CDS |
| TGGCACAATAATATCCGATT+GGG | 0.439186 | 4_2:-1205757 | Msa0582790:CDS |
| GAGGATTCTTTCGCCATTTG+AGG | 0.441108 | 4_2:+1203968 | None:intergenic |
| CATAAAGATTCAGGAAATAT+GGG | 0.442441 | 4_2:+1205489 | None:intergenic |
| AATTGAATTTCAGTTATTTG+TGG | 0.443334 | 4_2:-1206057 | Msa0582790:CDS |
| GATATCCATCCTAGTCACTA+TGG | 0.449002 | 4_2:-1204964 | Msa0582790:CDS |
| ACCTTTATTTCCATGTCTCC+CGG | 0.449391 | 4_2:+1203736 | None:intergenic |
| GTTCCCAGGGAATTCATTAG+AGG | 0.450312 | 4_2:+1205885 | None:intergenic |
| AAATTGAGTTATTTGGGTCC+TGG | 0.453699 | 4_2:-1205024 | Msa0582790:CDS |
| AACGGAATTTCAGTCTATAC+TGG | 0.455189 | 4_2:-1205777 | Msa0582790:CDS |
| ACTCGGCCCCTACCACCTAT+AGG | 0.455800 | 4_2:+1203866 | None:intergenic |
| AAATTGAAAATGCTTGGGGT+TGG | 0.457271 | 4_2:-1206206 | Msa0582790:CDS |
| TTAAATCAAATACAATTTGA+AGG | 0.460401 | 4_2:-1206155 | Msa0582790:CDS |
| AATGGAGGTTTGGGCGCTCG+AGG | 0.461267 | 4_2:-1203237 | Msa0582790:CDS |
| GCTCGTAATAATCTATCTTC+CGG | 0.462719 | 4_2:+1203938 | None:intergenic |
| GGTAGGCGAAATGGAGGTTT+GGG | 0.465784 | 4_2:-1203246 | Msa0582790:CDS |
| GGGTAGGCGAAATGGAGGTT+TGG | 0.465926 | 4_2:-1203247 | Msa0582790:CDS |
| GGGTAAATTAACGCCTCAAA+TGG | 0.467677 | 4_2:-1203981 | Msa0582790:CDS |
| GATCTAAAACTTGAGATAAT+GGG | 0.468332 | 4_2:+1205082 | None:intergenic |
| GGAAAGAGCGGAATATTTGA+TGG | 0.469164 | 4_2:-1203431 | Msa0582790:CDS |
| ATTTGTGGAAACATATCAAT+TGG | 0.470517 | 4_2:-1206042 | Msa0582790:CDS |
| ATTACAAGATCAATTTGGAT+TGG | 0.471878 | 4_2:-1205238 | Msa0582790:CDS |
| CATTTACTATAGAAGTTCCC+AGG | 0.473812 | 4_2:+1205871 | None:intergenic |
| CCGCTCTTTCCCGGATACTC+GGG | 0.478316 | 4_2:+1203443 | None:intergenic |
| TCTAGTTCTATCATCAGCTA+TGG | 0.479428 | 4_2:-1205658 | Msa0582790:CDS |
| AAGAATTTCTAACTATTGCA+TGG | 0.481440 | 4_2:-1204690 | Msa0582790:CDS |
| GGCGAAACAAGGAGGACAAC+GGG | 0.481846 | 4_2:-1203267 | Msa0582790:CDS |
| CCTGCGTGTTCGGCTATAGC+GGG | 0.483049 | 4_2:+1204466 | None:intergenic |
| CGTTTAGAAAATATAATTCG+AGG | 0.485783 | 4_2:-1205207 | Msa0582790:CDS |
| AATTGTGATTCTGGGATCTT+GGG | 0.486220 | 4_2:-1204026 | Msa0582790:CDS |
| AGATGTGAATTAGGAGGGAT+TGG | 0.486416 | 4_2:-1205435 | Msa0582790:CDS |
| TATAGACTGAAATTCCGTTA+TGG | 0.489213 | 4_2:+1205781 | None:intergenic |
| ATTGGAATGAAATTTGGAAT+GGG | 0.491267 | 4_2:-1205318 | Msa0582790:CDS |
| TGTTCATATCTCTCATCAAA+AGG | 0.491842 | 4_2:+1203542 | None:intergenic |
| CAACAAAGATGTGAATTAGG+AGG | 0.492034 | 4_2:-1205441 | Msa0582790:CDS |
| CGTTCAGAGTTGGACCATAA+CGG | 0.495197 | 4_2:-1205795 | Msa0582790:CDS |
| ATTTCCTGAATCTTTATGTA+CGG | 0.495836 | 4_2:-1205484 | Msa0582790:CDS |
| TTGGCAATTCACGCAAGGAT+TGG | 0.498707 | 4_2:-1204886 | Msa0582790:CDS |
| GATTGGAATGAAATTTGGAA+TGG | 0.498930 | 4_2:-1205319 | Msa0582790:CDS |
| CAAGTTGATGATAAAATACA+TGG | 0.502523 | 4_2:-1203341 | Msa0582790:CDS |
| GTGCATTGTTGGAACTGGAT+TGG | 0.504759 | 4_2:-1204518 | Msa0582790:CDS |
| TGGAGGTTTGGGCGCTCGAG+GGG | 0.505858 | 4_2:-1203235 | Msa0582790:CDS |
| CTCCTGAATCTAAGGCCACT+TGG | 0.506387 | 4_2:+1204491 | None:intergenic |
| TATCTATTATCGTTCAGAGT+TGG | 0.510246 | 4_2:-1205805 | Msa0582790:CDS |
| TGTACTCATTAGTGAACGTC+TGG | 0.512500 | 4_2:-1204188 | Msa0582790:CDS |
| AACAAAGATGTGAATTAGGA+GGG | 0.512939 | 4_2:-1205440 | Msa0582790:CDS |
| AGAACTACGATCTTTGGCTC+TGG | 0.513829 | 4_2:-1203066 | Msa0582790:CDS |
| GTTCGCCCCGTCAATCCTCC+AGG | 0.515843 | 4_2:+1205006 | None:intergenic |
| GATATGCCTTATTTGCAAGA+TGG | 0.518600 | 4_2:-1203686 | Msa0582790:CDS |
| TATTAGTAGCTTATATGCCA+TGG | 0.519177 | 4_2:-1204234 | Msa0582790:CDS |
| GTAAACAAACATCGAATCCA+TGG | 0.519391 | 4_2:-1203475 | Msa0582790:CDS |
| CAGAAACGTGAAATTAAAGT+AGG | 0.520965 | 4_2:-1203770 | Msa0582790:CDS |
| ATATAGTATTCATCTCTACT+TGG | 0.523407 | 4_2:+1204787 | None:intergenic |
| CTGGCACAATAATATCCGAT+TGG | 0.523488 | 4_2:-1205758 | Msa0582790:CDS |
| TGATAGAAAAGCAAGGATAT+GGG | 0.526528 | 4_2:-1205712 | Msa0582790:CDS |
| CGACAATTTGCTTGTGTAGG+CGG | 0.527978 | 4_2:-1205516 | Msa0582790:CDS |
| CTAGTTCTATCATCAGCTAT+GGG | 0.528023 | 4_2:-1205657 | Msa0582790:CDS |
| AAAGTAGGTGATAAAGTGGC+CGG | 0.529519 | 4_2:-1203755 | Msa0582790:CDS |
| AAAACTACCTATAGGTGGTA+GGG | 0.530153 | 4_2:-1203873 | Msa0582790:CDS |
| GCATTTACCTTTATGAACCT+GGG | 0.530323 | 4_2:+1204327 | None:intergenic |
| AAAGATTCTGGAGCATCCAC+AGG | 0.531781 | 4_2:+1203104 | None:intergenic |
| GCAGATGGTGCTGCTACTGT+TGG | 0.531919 | 4_2:-1204283 | Msa0582790:CDS |
| TAAATCAAATACAATTTGAA+GGG | 0.532005 | 4_2:-1206154 | Msa0582790:CDS |
| GATAAAGTGGCCGGGAGACA+TGG | 0.532845 | 4_2:-1203746 | Msa0582790:CDS |
| AGAAAGACTTCCAGATTCAA+AGG | 0.533242 | 4_2:-1203019 | Msa0582790:CDS |
| GGGTTGAAGACCATATCAAC+GGG | 0.535156 | 4_2:+1203659 | None:intergenic |
| CACAACAACCCCTTAAAGGA+AGG | 0.535519 | 4_2:-1203289 | Msa0582790:CDS |
| AATTCTTGACGGTATCGAGC+TGG | 0.536702 | 4_2:+1204706 | None:intergenic |
| TAAAACTACCTATAGGTGGT+AGG | 0.538804 | 4_2:-1203874 | Msa0582790:CDS |
| CAATAGTTAGAAATTCTTGA+CGG | 0.539101 | 4_2:+1204695 | None:intergenic |
| GGATATGGGCTCGTGTAAGT+AGG | 0.539731 | 4_2:-1205698 | Msa0582790:CDS |
| TAATCTATCTTCCGGAGCAT+AGG | 0.540322 | 4_2:+1203946 | None:intergenic |
| TCTATCTTCCGGAGCATAGG+AGG | 0.540370 | 4_2:+1203949 | None:intergenic |
| TACTCGGGTTCAAATATCCA+TGG | 0.546454 | 4_2:+1203458 | None:intergenic |
| TAGAAATTGATAGAAAAGCA+AGG | 0.548786 | 4_2:-1205719 | Msa0582790:CDS |
| TCCTGCGTGTTCGGCTATAG+CGG | 0.549505 | 4_2:+1204465 | None:intergenic |
| AGAATTTCTAACTATTGCAT+GGG | 0.549733 | 4_2:-1204689 | Msa0582790:CDS |
| AATTGTATTTGATTTAATCC+GGG | 0.549785 | 4_2:+1206161 | None:intergenic |
| CAGATATTGGAATGTTCACT+CGG | 0.551609 | 4_2:-1203605 | Msa0582790:CDS |
| TAGTGATTCTTTCAGGACCA+TGG | 0.551937 | 4_2:+1204101 | None:intergenic |
| GAATACTATATGGTAGCGAC+GGG | 0.553560 | 4_2:-1204775 | Msa0582790:CDS |
| GATGGTGCTGCTACTGTTGG+CGG | 0.553778 | 4_2:-1204280 | Msa0582790:CDS |
| TATCGACAATTTGCTTGTGT+AGG | 0.554239 | 4_2:-1205519 | Msa0582790:CDS |
| CATTGACCCAAATAGTTCAT+GGG | 0.556065 | 4_2:-1205050 | Msa0582790:CDS |
| GATTATTACGAGCTATACTT+GGG | 0.558504 | 4_2:-1203928 | Msa0582790:CDS |
| GCCGAGTTATTGATGTGAGA+TGG | 0.559021 | 4_2:-1203850 | Msa0582790:CDS |
| CTCGGAACTACGATTATTGG+AGG | 0.559077 | 4_2:-1203140 | Msa0582790:CDS |
| ATCTTGTAATAGATCTGCTA+CGG | 0.559735 | 4_2:+1205251 | None:intergenic |
| TCTGAATTATATATATCCGC+GGG | 0.562320 | 4_2:-1205966 | Msa0582790:CDS |
| AGACTTCCAGATTCAAAGGA+AGG | 0.563377 | 4_2:-1203015 | Msa0582790:CDS |
| GTCACTAAATTCTGAGGAGT+AGG | 0.563396 | 4_2:+1205150 | None:intergenic |
| GGAAGTCTTTCTCAGATACA+AGG | 0.565963 | 4_2:+1203030 | None:intergenic |
| AACAAGTGCATAATGTCCAC+TGG | 0.566338 | 4_2:+1203313 | None:intergenic |
| TGTTTCGCCCTTCCTTTAAG+GGG | 0.567625 | 4_2:+1203281 | None:intergenic |
| AATGTTCACTCGGATTAGCT+GGG | 0.569063 | 4_2:-1203595 | Msa0582790:CDS |
| AATCAAATATTGCAAAGCCC+TGG | 0.569397 | 4_2:-1205828 | Msa0582790:CDS |
| GAAAGAATCCTCCTATGCTC+CGG | 0.570879 | 4_2:-1203957 | Msa0582790:CDS |
| TGAATACTATATGGTAGCGA+CGG | 0.571395 | 4_2:-1204776 | Msa0582790:CDS |
| CACAATAATATCCGATTGGG+GGG | 0.571960 | 4_2:-1205754 | Msa0582790:CDS |
| TCCTACATTGATTCCTTCCG+AGG | 0.572209 | 4_2:+1204921 | None:intergenic |
| CAAATGCGTCCATAGTGACT+AGG | 0.573493 | 4_2:+1204955 | None:intergenic |
| CTCTGAATTATATATATCCG+CGG | 0.577667 | 4_2:-1205967 | Msa0582790:CDS |
| CTTAAAGGAAGGGCGAAACA+AGG | 0.579473 | 4_2:-1203278 | Msa0582790:CDS |
| AATTAAAGTAGGTGATAAAG+TGG | 0.581077 | 4_2:-1203759 | Msa0582790:CDS |
| ATATTTGAACCCGAGTATCC+GGG | 0.581389 | 4_2:-1203452 | Msa0582790:CDS |
| CAGACTCATGTGACAAGCCA+TGG | 0.581560 | 4_2:-1204118 | Msa0582790:CDS |
| CTGTCCTACATTCATTCGTG+AGG | 0.583153 | 4_2:+1203625 | None:intergenic |
| AGTAAATGGGCTTCTAGATG+TGG | 0.584284 | 4_2:+1204070 | None:intergenic |
| CCCGAGTATCCGGGAAAGAG+CGG | 0.584519 | 4_2:-1203443 | Msa0582790:CDS |
| TGTCCAATTGACACCTCGGA+AGG | 0.584582 | 4_2:-1204934 | Msa0582790:CDS |
| GTCTTTCCTCAATGAAAAGG+AGG | 0.586724 | 4_2:-1205583 | Msa0582790:CDS |
| CGCGGATATATATAATTCAG+AGG | 0.586801 | 4_2:+1205968 | None:intergenic |
| ATTTACTATAGAAGTTCCCA+GGG | 0.587463 | 4_2:+1205872 | None:intergenic |
| ATGCTCGATAAAAGGAATCA+GGG | 0.587469 | 4_2:+1204612 | None:intergenic |
| TCTGAACGATAATAGATACC+AGG | 0.589979 | 4_2:+1205810 | None:intergenic |
| TGGGATCTTGGGTAGAAACA+GGG | 0.592045 | 4_2:-1204015 | Msa0582790:CDS |
| TCAGAATTGTAACCTTCCCA+TGG | 0.596416 | 4_2:+1204217 | None:intergenic |
| ATTAGTAGCTTATATGCCAT+GGG | 0.596673 | 4_2:-1204233 | Msa0582790:CDS |
| AAGTAGGTGATAAAGTGGCC+GGG | 0.597954 | 4_2:-1203754 | Msa0582790:CDS |
| GGGCGAAACAAGGAGGACAA+CGG | 0.598993 | 4_2:-1203268 | Msa0582790:CDS |
| TCCATCTCACATCAATAACT+CGG | 0.602104 | 4_2:+1203849 | None:intergenic |
| ATTCCTCTAATGAATTCCCT+GGG | 0.606971 | 4_2:-1205888 | Msa0582790:CDS |
| CACGCAAGGATTGGTCCTTG+GGG | 0.608804 | 4_2:-1204877 | Msa0582790:CDS |
| GTAGCTTATATGCCATGGGA+AGG | 0.611195 | 4_2:-1204229 | Msa0582790:CDS |
| TGTCCTACATTCATTCGTGA+GGG | 0.611498 | 4_2:+1203626 | None:intergenic |
| GATCCTTGGCAATTCACGCA+AGG | 0.614349 | 4_2:-1204891 | Msa0582790:CDS |
| AAAATACATGGACGTTCCAG+TGG | 0.614997 | 4_2:-1203329 | Msa0582790:CDS |
| AACTGGATTGGAACGCCAAG+TGG | 0.615266 | 4_2:-1204506 | Msa0582790:CDS |
| GTTGAAGTCACTAAATTCTG+AGG | 0.617323 | 4_2:+1205144 | None:intergenic |
| AAACTACCTATAGGTGGTAG+GGG | 0.618823 | 4_2:-1203872 | Msa0582790:CDS |
| TGATGAGAGATATGAACAGG+AGG | 0.620223 | 4_2:-1203537 | Msa0582790:CDS |
| AATCCTTGCGTGAATTGCCA+AGG | 0.621341 | 4_2:+1204888 | None:intergenic |
| CATTTGTCCAATTGACACCT+CGG | 0.622149 | 4_2:-1204938 | Msa0582790:CDS |
| GTACCCTCACGAATGAATGT+AGG | 0.622385 | 4_2:-1203629 | Msa0582790:CDS |
| TGGGTTGAAGACCATATCAA+CGG | 0.622611 | 4_2:+1203658 | None:intergenic |
| TGCGTCCATAGTGACTAGGA+TGG | 0.626242 | 4_2:+1204959 | None:intergenic |
| AAACAAGGAGGACAACGGGT+AGG | 0.626804 | 4_2:-1203263 | Msa0582790:CDS |
| GGCACAATAATATCCGATTG+GGG | 0.627268 | 4_2:-1205756 | Msa0582790:CDS |
| GAAGGAATGTCTACACTACC+CGG | 0.627870 | 4_2:-1206179 | Msa0582790:CDS |
| ACGCAAGGATTGGTCCTTGG+GGG | 0.629421 | 4_2:-1204876 | Msa0582790:CDS |
| TTGAGTTATTTGGGTCCTGG+AGG | 0.630319 | 4_2:-1205021 | Msa0582790:CDS |
| TGGGTCCTGGAGGATTGACG+GGG | 0.631061 | 4_2:-1205011 | Msa0582790:CDS |
| GGGATCTTGGGTAGAAACAG+GGG | 0.635116 | 4_2:-1204014 | Msa0582790:CDS |
| ACAACAACCCCTTAAAGGAA+GGG | 0.636584 | 4_2:-1203288 | Msa0582790:CDS |
| ACAATAATATCCGATTGGGG+GGG | 0.637953 | 4_2:-1205753 | Msa0582790:CDS |
| CTGAACGATAATAGATACCA+GGG | 0.641198 | 4_2:+1205811 | None:intergenic |
| ACCTCGGAAGGAATCAATGT+AGG | 0.642821 | 4_2:-1204922 | Msa0582790:CDS |
| GGGGAAATTGAAAATGCTTG+GGG | 0.643696 | 4_2:-1206210 | Msa0582790:CDS |
| AGGAACAATACCTAAACCTG+TGG | 0.656849 | 4_2:-1203120 | Msa0582790:CDS |
| AAAGCTCGTCAAGAAGTACT+CGG | 0.659322 | 4_2:-1203158 | Msa0582790:CDS |
| ACAACGGGTAGGCGAAATGG+AGG | 0.659407 | 4_2:-1203252 | Msa0582790:CDS |
| TATGGTCTTCAACCCATTAG+GGG | 0.670295 | 4_2:-1203651 | Msa0582790:CDS |
| GATTCAGGTATCGACCTCAA+AGG | 0.672007 | 4_2:-1203906 | Msa0582790:CDS |
| TGTCTAAAACTACCTATAGG+TGG | 0.673297 | 4_2:-1203878 | Msa0582790:CDS |
| GCACAATAATATCCGATTGG+GGG | 0.683666 | 4_2:-1205755 | Msa0582790:CDS |
| CCCGCTATAGCCGAACACGC+AGG | 0.684746 | 4_2:-1204466 | Msa0582790:CDS |
| GAATATTTGATGGAAGAACA+GGG | 0.689025 | 4_2:-1203421 | Msa0582790:CDS |
| GCGAGATATATTGACAGCTG+CGG | 0.702124 | 4_2:-1205349 | Msa0582790:CDS |
| GCAGCTGTCAATATATCTCG+CGG | 0.702925 | 4_2:+1205351 | None:intergenic |
| AAAGGAAGGGCGAAACAAGG+AGG | 0.708508 | 4_2:-1203275 | Msa0582790:CDS |
| ACTGAATCGAGGTATTCAGG+AGG | 0.734798 | 4_2:-1204740 | Msa0582790:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTGTATTTGATTTAATC+CGG | + | chr4_2:1203062-1203081 | None:intergenic | 15.0% |
| !! | TTAAATCAAATACAATTTGA+AGG | - | chr4_2:1203064-1203083 | Msa0582790:CDS | 15.0% |
| !! | TAAATCAAATACAATTTGAA+GGG | - | chr4_2:1203065-1203084 | Msa0582790:CDS | 15.0% |
| !!! | CAATAAAAATAATTTGTTCT+TGG | + | chr4_2:1203306-1203325 | None:intergenic | 15.0% |
| !!! | CAAGAACAAATTATTTTTAT+TGG | - | chr4_2:1203304-1203323 | Msa0582790:CDS | 15.0% |
| !! | TGAATTAATTTCAAGATATA+AGG | + | chr4_2:1205857-1205876 | None:intergenic | 15.0% |
| !!! | AATTGTATTTGATTTAATCC+GGG | + | chr4_2:1203061-1203080 | None:intergenic | 20.0% |
| !! | AATTGAATTTCAGTTATTTG+TGG | - | chr4_2:1203162-1203181 | Msa0582790:CDS | 20.0% |
| !!! | ATTAATTTGGAAAAACAGTA+GGG | - | chr4_2:1203276-1203295 | Msa0582790:CDS | 20.0% |
| !! | AAAAGGAGGAAAAAAAAATA+GGG | - | chr4_2:1203650-1203669 | Msa0582790:CDS | 20.0% |
| !! | TAACAAAAATGTATTGTTCT+CGG | + | chr4_2:1203848-1203867 | None:intergenic | 20.0% |
| !!! | AAGATCATTTTATTTGGAAA+TGG | - | chr4_2:1204801-1204820 | Msa0582790:CDS | 20.0% |
| !!! | AGATCATTTTATTTGGAAAT+GGG | - | chr4_2:1204802-1204821 | Msa0582790:CDS | 20.0% |
| !!! | ATTTTATTAGTGATTCTTTC+AGG | + | chr4_2:1205128-1205147 | None:intergenic | 20.0% |
| !!! | TTCCATTTTTGTCTAAATTT+CGG | + | chr4_2:1205175-1205194 | None:intergenic | 20.0% |
| !! | ATATATATATGAATCGTTTC+TGG | + | chr4_2:1205425-1205444 | None:intergenic | 20.0% |
| ! | GTTTCCAAAAATTGAAGATA+CGG | - | chr4_2:1203132-1203151 | Msa0582790:CDS | 25.0% |
| ! | ATTTGTGGAAACATATCAAT+TGG | - | chr4_2:1203177-1203196 | Msa0582790:CDS | 25.0% |
| !! | GATTAATTTGGAAAAACAGT+AGG | - | chr4_2:1203275-1203294 | Msa0582790:CDS | 25.0% |
| ! | TAGAAATTGATAGAAAAGCA+AGG | - | chr4_2:1203500-1203519 | Msa0582790:CDS | 25.0% |
| ! | AGGAAAGACATAAAAATTTC+GGG | + | chr4_2:1203625-1203644 | None:intergenic | 25.0% |
| ! | GAGGAAAGACATAAAAATTT+CGG | + | chr4_2:1203626-1203645 | None:intergenic | 25.0% |
| ! | GAAAAGGAGGAAAAAAAAAT+AGG | - | chr4_2:1203649-1203668 | Msa0582790:CDS | 25.0% |
| ! | CATAAAGATTCAGGAAATAT+GGG | + | chr4_2:1203733-1203752 | None:intergenic | 25.0% |
| ! | ACATAAAGATTCAGGAAATA+TGG | + | chr4_2:1203734-1203753 | None:intergenic | 25.0% |
| ! | ATTTCCTGAATCTTTATGTA+CGG | - | chr4_2:1203735-1203754 | Msa0582790:CDS | 25.0% |
| ! | TTTCAACAAAGATGTGAATT+AGG | - | chr4_2:1203775-1203794 | Msa0582790:CDS | 25.0% |
| ! | AACAAAAATGTATTGTTCTC+GGG | + | chr4_2:1203847-1203866 | None:intergenic | 25.0% |
| ! | CATTTGATTGGAATGAAATT+TGG | - | chr4_2:1203895-1203914 | Msa0582790:CDS | 25.0% |
| !! | ATTGGAATGAAATTTGGAAT+GGG | - | chr4_2:1203901-1203920 | Msa0582790:CDS | 25.0% |
| ! | GATCTATTACAAGATCAATT+TGG | - | chr4_2:1203976-1203995 | Msa0582790:CDS | 25.0% |
| ! | ATTACAAGATCAATTTGGAT+TGG | - | chr4_2:1203981-1204000 | Msa0582790:CDS | 25.0% |
| ! | CGTTTAGAAAATATAATTCG+AGG | - | chr4_2:1204012-1204031 | Msa0582790:CDS | 25.0% |
| !! | GATCTAAAACTTGAGATAAT+GGG | + | chr4_2:1204140-1204159 | None:intergenic | 25.0% |
| ! | CTCTCAGAAATTTCAAAAAA+TGG | + | chr4_2:1204381-1204400 | None:intergenic | 25.0% |
| ! | ATATAGTATTCATCTCTACT+TGG | + | chr4_2:1204435-1204454 | None:intergenic | 25.0% |
| ! | AAGTAGAGATGAATACTATA+TGG | - | chr4_2:1204434-1204453 | Msa0582790:CDS | 25.0% |
| ! | CAATAGTTAGAAATTCTTGA+CGG | + | chr4_2:1204527-1204546 | None:intergenic | 25.0% |
| ! | AAGAATTTCTAACTATTGCA+TGG | - | chr4_2:1204529-1204548 | Msa0582790:CDS | 25.0% |
| ! | AGAATTTCTAACTATTGCAT+GGG | - | chr4_2:1204530-1204549 | Msa0582790:CDS | 25.0% |
| ! | CCAATAGAAAAATATTGGAA+GGG | + | chr4_2:1204582-1204601 | None:intergenic | 25.0% |
| ! | TCCAATAGAAAAATATTGGA+AGG | + | chr4_2:1204583-1204602 | None:intergenic | 25.0% |
| ! | AAGCTCCAATAGAAAAATAT+TGG | + | chr4_2:1204587-1204606 | None:intergenic | 25.0% |
| !! | ACTGACAAGATCATTTTATT+TGG | - | chr4_2:1204795-1204814 | Msa0582790:CDS | 25.0% |
| ! | GAACGTTGATATCTAATTAA+TGG | + | chr4_2:1204843-1204862 | None:intergenic | 25.0% |
| ! | TAAAGGTAAATGCGTAAAAA+AGG | - | chr4_2:1204902-1204921 | Msa0582790:CDS | 25.0% |
| ! | AAAGGTAAATGCGTAAAAAA+GGG | - | chr4_2:1204903-1204922 | Msa0582790:CDS | 25.0% |
| ! | AAAAATGGAATTGTGATTCT+GGG | - | chr4_2:1205185-1205204 | Msa0582790:CDS | 25.0% |
| ! | AATTAAAGTAGGTGATAAAG+TGG | - | chr4_2:1205460-1205479 | Msa0582790:CDS | 25.0% |
| !! | TAAGGTTTTCCTATTATAAC+AGG | + | chr4_2:1205839-1205858 | None:intergenic | 25.0% |
| !!! | CAAGTTGATGATAAAATACA+TGG | - | chr4_2:1205878-1205897 | Msa0582790:CDS | 25.0% |
| !! | GGTTTTGTAGATTCATTGAT+CGG | - | chr4_2:1203086-1203105 | Msa0582790:CDS | 30.0% |
| ! | GTTTTGTAGATTCATTGATC+GGG | - | chr4_2:1203087-1203106 | Msa0582790:CDS | 30.0% |
| ! | TTTTGTAGATTCATTGATCG+GGG | - | chr4_2:1203088-1203107 | Msa0582790:CDS | 30.0% |
| ! | TGATCCGTATCTTCAATTTT+TGG | + | chr4_2:1203139-1203158 | None:intergenic | 30.0% |
| ! | GCATCTTTTTCTTTTATCGA+GGG | + | chr4_2:1203208-1203227 | None:intergenic | 30.0% |
| ! | AGCATCTTTTTCTTTTATCG+AGG | + | chr4_2:1203209-1203228 | None:intergenic | 30.0% |
| CTCTGAATTATATATATCCG+CGG | - | chr4_2:1203252-1203271 | Msa0582790:CDS | 30.0% | |
| TCTGAATTATATATATCCGC+GGG | - | chr4_2:1203253-1203272 | Msa0582790:CDS | 30.0% | |
| ATTTACTATAGAAGTTCCCA+GGG | + | chr4_2:1203350-1203369 | None:intergenic | 30.0% | |
| TATCTATTATCGTTCAGAGT+TGG | - | chr4_2:1203414-1203433 | Msa0582790:CDS | 30.0% | |
| TATAGACTGAAATTCCGTTA+TGG | + | chr4_2:1203441-1203460 | None:intergenic | 30.0% | |
| TTGATAGAAAAGCAAGGATA+TGG | - | chr4_2:1203506-1203525 | Msa0582790:CDS | 30.0% | |
| TGATAGAAAAGCAAGGATAT+GGG | - | chr4_2:1203507-1203526 | Msa0582790:CDS | 30.0% | |
| GGAAAGACATAAAAATTTCG+GGG | + | chr4_2:1203624-1203643 | None:intergenic | 30.0% | |
| TATGTCTTTCCTCAATGAAA+AGG | - | chr4_2:1203633-1203652 | Msa0582790:CDS | 30.0% | |
| !!! | TTTTTTCCTCCTTTTCATTG+AGG | + | chr4_2:1203645-1203664 | None:intergenic | 30.0% |
| !! | GTCAAAAGAAAATGCCATTT+TGG | - | chr4_2:1203672-1203691 | Msa0582790:CDS | 30.0% |
| TTGTCGATAAAACTCCAAAA+TGG | + | chr4_2:1203689-1203708 | None:intergenic | 30.0% | |
| AATTCCGTACATAAAGATTC+AGG | + | chr4_2:1203742-1203761 | None:intergenic | 30.0% | |
| AACAAAGATGTGAATTAGGA+GGG | - | chr4_2:1203779-1203798 | Msa0582790:CDS | 30.0% | |
| GTATATCAATGTTCAGTCTT+CGG | + | chr4_2:1203825-1203844 | None:intergenic | 30.0% | |
| GATTGGAATGAAATTTGGAA+TGG | - | chr4_2:1203900-1203919 | Msa0582790:CDS | 30.0% | |
| ATCTTGTAATAGATCTGCTA+CGG | + | chr4_2:1203971-1203990 | None:intergenic | 30.0% | |
| ATAATTCGAGGAACTATATC+TGG | - | chr4_2:1204024-1204043 | Msa0582790:CDS | 30.0% | |
| GATTCATAAGTGGTTGTTAA+TGG | + | chr4_2:1204102-1204121 | None:intergenic | 30.0% | |
| !!! | ACCACTTATGAATCGTTTTT+TGG | - | chr4_2:1204108-1204127 | Msa0582790:CDS | 30.0% |
| TCCAAAAAACGATTCATAAG+TGG | + | chr4_2:1204112-1204131 | None:intergenic | 30.0% | |
| ! | CGATCTAAAACTTGAGATAA+TGG | + | chr4_2:1204141-1204160 | None:intergenic | 30.0% |
| ! | TTTTCTCCCATGAACTATTT+GGG | + | chr4_2:1204178-1204197 | None:intergenic | 30.0% |
| ! | ATTTTCTCCCATGAACTATT+TGG | + | chr4_2:1204179-1204198 | None:intergenic | 30.0% |
| TGGGAGAAAATTGAGTTATT+TGG | - | chr4_2:1204188-1204207 | Msa0582790:CDS | 30.0% | |
| GGGAGAAAATTGAGTTATTT+GGG | - | chr4_2:1204189-1204208 | Msa0582790:CDS | 30.0% | |
| !!! | AATTTTTTAGCACTGAATCG+AGG | - | chr4_2:1204468-1204487 | Msa0582790:CDS | 30.0% |
| ! | CCCTTCCAATATTTTTCTAT+TGG | - | chr4_2:1204579-1204598 | Msa0582790:CDS | 30.0% |
| !! | ATGCATGCAAGTATTTTTGT+TGG | + | chr4_2:1204865-1204884 | None:intergenic | 30.0% |
| TATTAGTAGCTTATATGCCA+TGG | - | chr4_2:1204985-1205004 | Msa0582790:CDS | 30.0% | |
| ATTAGTAGCTTATATGCCAT+GGG | - | chr4_2:1204986-1205005 | Msa0582790:CDS | 30.0% | |
| GTCTAAATTTCGGAGTAAAT+GGG | + | chr4_2:1205165-1205184 | None:intergenic | 30.0% | |
| TGTCTAAATTTCGGAGTAAA+TGG | + | chr4_2:1205166-1205185 | None:intergenic | 30.0% | |
| CTCCGAAATTTAGACAAAAA+TGG | - | chr4_2:1205170-1205189 | Msa0582790:CDS | 30.0% | |
| CAAAAATGGAATTGTGATTC+TGG | - | chr4_2:1205184-1205203 | Msa0582790:CDS | 30.0% | |
| AGATTATTACGAGCTATACT+TGG | - | chr4_2:1205290-1205309 | Msa0582790:CDS | 30.0% | |
| GATTATTACGAGCTATACTT+GGG | - | chr4_2:1205291-1205310 | Msa0582790:CDS | 30.0% | |
| ! | TTTTAGACAAGTTTCCTTTG+AGG | + | chr4_2:1205330-1205349 | None:intergenic | 30.0% |
| ! | ACTTGTCTAAAACTACCTAT+AGG | - | chr4_2:1205338-1205357 | Msa0582790:CDS | 30.0% |
| CAGAAACGTGAAATTAAAGT+AGG | - | chr4_2:1205449-1205468 | Msa0582790:CDS | 30.0% | |
| ! | TTCAAAGATTTTGTCTAGAC+AGG | - | chr4_2:1205511-1205530 | Msa0582790:CDS | 30.0% |
| AATGAATGTAGGACAGATAT+TGG | - | chr4_2:1205601-1205620 | Msa0582790:CDS | 30.0% | |
| TGTTCATATCTCTCATCAAA+AGG | + | chr4_2:1205680-1205699 | None:intergenic | 30.0% | |
| ! | TTTTGATGAGAGATATGAAC+AGG | - | chr4_2:1205679-1205698 | Msa0582790:CDS | 30.0% |
| ! | TTCAGAAAACACAAGTTTTC+TGG | + | chr4_2:1205711-1205730 | None:intergenic | 30.0% |
| GAATATTTGATGGAAGAACA+GGG | - | chr4_2:1205798-1205817 | Msa0582790:CDS | 30.0% | |
| ATTATAACAGGCTGTTCAAA+AGG | + | chr4_2:1205827-1205846 | None:intergenic | 30.0% | |
| TTTGAACAGCCTGTTATAAT+AGG | - | chr4_2:1205827-1205846 | Msa0582790:CDS | 30.0% | |
| ATGGGGAAATTGAAAATGCT+TGG | - | chr4_2:1203007-1203026 | Msa0582790:CDS | 35.0% | |
| TGGGGAAATTGAAAATGCTT+GGG | - | chr4_2:1203008-1203027 | Msa0582790:CDS | 35.0% | |
| AAATTGAAAATGCTTGGGGT+TGG | - | chr4_2:1203013-1203032 | Msa0582790:CDS | 35.0% | |
| AATTGAAAATGCTTGGGGTT+GGG | - | chr4_2:1203014-1203033 | Msa0582790:CDS | 35.0% | |
| CGCGGATATATATAATTCAG+AGG | + | chr4_2:1203254-1203273 | None:intergenic | 35.0% | |
| ATATATCCGCGGGATTAATT+TGG | - | chr4_2:1203263-1203282 | Msa0582790:CDS | 35.0% | |
| ! | GTTTTTCCAAATTAATCCCG+CGG | + | chr4_2:1203272-1203291 | None:intergenic | 35.0% |
| ATTCCTCTAATGAATTCCCT+GGG | - | chr4_2:1203331-1203350 | Msa0582790:CDS | 35.0% | |
| CATTTACTATAGAAGTTCCC+AGG | + | chr4_2:1203351-1203370 | None:intergenic | 35.0% | |
| CTGGGAACTTCTATAGTAAA+TGG | - | chr4_2:1203349-1203368 | Msa0582790:CDS | 35.0% | |
| AATCAAATATTGCAAAGCCC+TGG | - | chr4_2:1203391-1203410 | Msa0582790:CDS | 35.0% | |
| CTGAACGATAATAGATACCA+GGG | + | chr4_2:1203411-1203430 | None:intergenic | 35.0% | |
| TCTGAACGATAATAGATACC+AGG | + | chr4_2:1203412-1203431 | None:intergenic | 35.0% | |
| AACGGAATTTCAGTCTATAC+TGG | - | chr4_2:1203442-1203461 | Msa0582790:CDS | 35.0% | |
| TGGCACAATAATATCCGATT+GGG | - | chr4_2:1203462-1203481 | Msa0582790:CDS | 35.0% | |
| !! | TCTAGTTCTATCATCAGCTA+TGG | - | chr4_2:1203561-1203580 | Msa0582790:CDS | 35.0% |
| !! | CTAGTTCTATCATCAGCTAT+GGG | - | chr4_2:1203562-1203581 | Msa0582790:CDS | 35.0% |
| ! | TATCGACAATTTGCTTGTGT+AGG | - | chr4_2:1203700-1203719 | Msa0582790:CDS | 35.0% |
| CAACAAAGATGTGAATTAGG+AGG | - | chr4_2:1203778-1203797 | Msa0582790:CDS | 35.0% | |
| TCAGTCTTCGGTTCATATTT+CGG | + | chr4_2:1203813-1203832 | None:intergenic | 35.0% | |
| GTTGAAGTCACTAAATTCTG+AGG | + | chr4_2:1204078-1204097 | None:intergenic | 35.0% | |
| AACTATTTGGGTCAATGGAT+TGG | + | chr4_2:1204166-1204185 | None:intergenic | 35.0% | |
| CATTGACCCAAATAGTTCAT+GGG | - | chr4_2:1204169-1204188 | Msa0582790:CDS | 35.0% | |
| AAATTGAGTTATTTGGGTCC+TGG | - | chr4_2:1204195-1204214 | Msa0582790:CDS | 35.0% | |
| GGAATCAATGTAGGACTTAT+TGG | - | chr4_2:1204306-1204325 | Msa0582790:CDS | 35.0% | |
| ! | TGAATACTATATGGTAGCGA+CGG | - | chr4_2:1204443-1204462 | Msa0582790:CDS | 35.0% |
| ATGCTCGATAAAAGGAATCA+GGG | + | chr4_2:1204610-1204629 | None:intergenic | 35.0% | |
| TATGCTCGATAAAAGGAATC+AGG | + | chr4_2:1204611-1204630 | None:intergenic | 35.0% | |
| GCATCATTATGCTCGATAAA+AGG | + | chr4_2:1204618-1204637 | None:intergenic | 35.0% | |
| ! | AGTTCCAACAATGCACTTTT+CGG | + | chr4_2:1204697-1204716 | None:intergenic | 35.0% |
| CAAAAATCCCAGGTTCATAA+AGG | - | chr4_2:1204885-1204904 | Msa0582790:CDS | 35.0% | |
| GCATTTACCTTTATGAACCT+GGG | + | chr4_2:1204895-1204914 | None:intergenic | 35.0% | |
| !! | AAGGGACAAATTTTAGCAGA+TGG | - | chr4_2:1204921-1204940 | Msa0582790:CDS | 35.0% |
| !! | AATTGTGATTCTGGGATCTT+GGG | - | chr4_2:1205193-1205212 | Msa0582790:CDS | 35.0% |
| !! | AGAAACAGGGGATATTTTAG+TGG | - | chr4_2:1205217-1205236 | Msa0582790:CDS | 35.0% |
| !!! | GAAACAGGGGATATTTTAGT+GGG | - | chr4_2:1205218-1205237 | Msa0582790:CDS | 35.0% |
| GCTCGTAATAATCTATCTTC+CGG | + | chr4_2:1205284-1205303 | None:intergenic | 35.0% | |
| ! | TGTCTAAAACTACCTATAGG+TGG | - | chr4_2:1205341-1205360 | Msa0582790:CDS | 35.0% |
| TAAAACTACCTATAGGTGGT+AGG | - | chr4_2:1205345-1205364 | Msa0582790:CDS | 35.0% | |
| AAAACTACCTATAGGTGGTA+GGG | - | chr4_2:1205346-1205365 | Msa0582790:CDS | 35.0% | |
| TCCATCTCACATCAATAACT+CGG | + | chr4_2:1205373-1205392 | None:intergenic | 35.0% | |
| AGATGGATCCAAAAAAAAGC+AGG | - | chr4_2:1205386-1205405 | Msa0582790:CDS | 35.0% | |
| !!! | AGCTAGAACCTGCTTTTTTT+TGG | + | chr4_2:1205397-1205416 | None:intergenic | 35.0% |
| !! | GATATGCCTTATTTGCAAGA+TGG | - | chr4_2:1205533-1205552 | Msa0582790:CDS | 35.0% |
| ATATGGTCTTCAACCCATTA+GGG | - | chr4_2:1205567-1205586 | Msa0582790:CDS | 35.0% | |
| CAGATATTGGAATGTTCACT+CGG | - | chr4_2:1205614-1205633 | Msa0582790:CDS | 35.0% | |
| TGGATTCGATGTTTGTTTAC+TGG | + | chr4_2:1205744-1205763 | None:intergenic | 35.0% | |
| GTAAACAAACATCGAATCCA+TGG | - | chr4_2:1205744-1205763 | Msa0582790:CDS | 35.0% | |
| GGAATATTTGATGGAAGAAC+AGG | - | chr4_2:1205797-1205816 | Msa0582790:CDS | 35.0% | |
| AGAAAGACTTCCAGATTCAA+AGG | - | chr4_2:1206200-1206219 | Msa0582790:CDS | 35.0% | |
| AAACTTCCTTCCTTTGAATC+TGG | + | chr4_2:1206213-1206232 | None:intergenic | 35.0% | |
| GGGGAAATTGAAAATGCTTG+GGG | - | chr4_2:1203009-1203028 | Msa0582790:CDS | 40.0% | |
| CATTCCTCTAATGAATTCCC+TGG | - | chr4_2:1203330-1203349 | Msa0582790:CDS | 40.0% | |
| CTGGCACAATAATATCCGAT+TGG | - | chr4_2:1203461-1203480 | Msa0582790:CDS | 40.0% | |
| GGCACAATAATATCCGATTG+GGG | - | chr4_2:1203463-1203482 | Msa0582790:CDS | 40.0% | |
| GCACAATAATATCCGATTGG+GGG | - | chr4_2:1203464-1203483 | Msa0582790:CDS | 40.0% | |
| CACAATAATATCCGATTGGG+GGG | - | chr4_2:1203465-1203484 | Msa0582790:CDS | 40.0% | |
| ACAATAATATCCGATTGGGG+GGG | - | chr4_2:1203466-1203485 | Msa0582790:CDS | 40.0% | |
| GTCTTTCCTCAATGAAAAGG+AGG | - | chr4_2:1203636-1203655 | Msa0582790:CDS | 40.0% | |
| AGATGTGAATTAGGAGGGAT+TGG | - | chr4_2:1203784-1203803 | Msa0582790:CDS | 40.0% | |
| ! | GTCACTAAATTCTGAGGAGT+AGG | + | chr4_2:1204072-1204091 | None:intergenic | 40.0% |
| CCATGAACTATTTGGGTCAA+TGG | + | chr4_2:1204171-1204190 | None:intergenic | 40.0% | |
| CCATTGACCCAAATAGTTCA+TGG | - | chr4_2:1204168-1204187 | Msa0582790:CDS | 40.0% | |
| !!! | GAACTGCTAGTTTTCGGATA+CGG | - | chr4_2:1204232-1204251 | Msa0582790:CDS | 40.0% |
| !!! | AACTGCTAGTTTTCGGATAC+GGG | - | chr4_2:1204233-1204252 | Msa0582790:CDS | 40.0% |
| GATATCCATCCTAGTCACTA+TGG | - | chr4_2:1204255-1204274 | Msa0582790:CDS | 40.0% | |
| CATTTGTCCAATTGACACCT+CGG | - | chr4_2:1204281-1204300 | Msa0582790:CDS | 40.0% | |
| TGTAGGACTTATTGGATCCT+TGG | - | chr4_2:1204314-1204333 | Msa0582790:CDS | 40.0% | |
| ! | GAATACTATATGGTAGCGAC+GGG | - | chr4_2:1204444-1204463 | Msa0582790:CDS | 40.0% |
| TCTAACTATTGCATGGGAAC+AGG | - | chr4_2:1204536-1204555 | Msa0582790:CDS | 40.0% | |
| ! | GAAAAGTGCATTGTTGGAAC+TGG | - | chr4_2:1204696-1204715 | Msa0582790:CDS | 40.0% |
| TTGCATGCATCAAAAATCCC+AGG | - | chr4_2:1204875-1204894 | Msa0582790:CDS | 40.0% | |
| CGCATTTACCTTTATGAACC+TGG | + | chr4_2:1204896-1204915 | None:intergenic | 40.0% | |
| TCAGAATTGTAACCTTCCCA+TGG | + | chr4_2:1205005-1205024 | None:intergenic | 40.0% | |
| TGTACTCATTAGTGAACGTC+TGG | - | chr4_2:1205031-1205050 | Msa0582790:CDS | 40.0% | |
| TAGTGATTCTTTCAGGACCA+TGG | + | chr4_2:1205121-1205140 | None:intergenic | 40.0% | |
| ! | AGTAAATGGGCTTCTAGATG+TGG | + | chr4_2:1205152-1205171 | None:intergenic | 40.0% |
| !! | GAATTGTGATTCTGGGATCT+TGG | - | chr4_2:1205192-1205211 | Msa0582790:CDS | 40.0% |
| GGGTAAATTAACGCCTCAAA+TGG | - | chr4_2:1205238-1205257 | Msa0582790:CDS | 40.0% | |
| TAATCTATCTTCCGGAGCAT+AGG | + | chr4_2:1205276-1205295 | None:intergenic | 40.0% | |
| AAACTACCTATAGGTGGTAG+GGG | - | chr4_2:1205347-1205366 | Msa0582790:CDS | 40.0% | |
| AAAGTAGGTGATAAAGTGGC+CGG | - | chr4_2:1205464-1205483 | Msa0582790:CDS | 40.0% | |
| ! | ACCTTTATTTCCATGTCTCC+CGG | + | chr4_2:1205486-1205505 | None:intergenic | 40.0% |
| GGTCTTCCATCTTGCAAATA+AGG | + | chr4_2:1205542-1205561 | None:intergenic | 40.0% | |
| ! | TGGGTTGAAGACCATATCAA+CGG | + | chr4_2:1205564-1205583 | None:intergenic | 40.0% |
| GATATGGTCTTCAACCCATT+AGG | - | chr4_2:1205566-1205585 | Msa0582790:CDS | 40.0% | |
| TATGGTCTTCAACCCATTAG+GGG | - | chr4_2:1205568-1205587 | Msa0582790:CDS | 40.0% | |
| TGTCCTACATTCATTCGTGA+GGG | + | chr4_2:1205596-1205615 | None:intergenic | 40.0% | |
| !! | AATGTTCACTCGGATTAGCT+GGG | - | chr4_2:1205624-1205643 | Msa0582790:CDS | 40.0% |
| TGATGAGAGATATGAACAGG+AGG | - | chr4_2:1205682-1205701 | Msa0582790:CDS | 40.0% | |
| TACTCGGGTTCAAATATCCA+TGG | + | chr4_2:1205764-1205783 | None:intergenic | 40.0% | |
| GATATTTGAACCCGAGTATC+CGG | - | chr4_2:1205766-1205785 | Msa0582790:CDS | 40.0% | |
| ATATTTGAACCCGAGTATCC+GGG | - | chr4_2:1205767-1205786 | Msa0582790:CDS | 40.0% | |
| TCAAATATTCCGCTCTTTCC+CGG | + | chr4_2:1205788-1205807 | None:intergenic | 40.0% | |
| GGAAAGAGCGGAATATTTGA+TGG | - | chr4_2:1205788-1205807 | Msa0582790:CDS | 40.0% | |
| AAAATACATGGACGTTCCAG+TGG | - | chr4_2:1205890-1205909 | Msa0582790:CDS | 40.0% | |
| AACAAGTGCATAATGTCCAC+TGG | + | chr4_2:1205909-1205928 | None:intergenic | 40.0% | |
| GTTACACAACAACCCCTTAA+AGG | - | chr4_2:1205926-1205945 | Msa0582790:CDS | 40.0% | |
| ACAACAACCCCTTAAAGGAA+GGG | - | chr4_2:1205931-1205950 | Msa0582790:CDS | 40.0% | |
| TTGTTTCGCCCTTCCTTTAA+GGG | + | chr4_2:1205942-1205961 | None:intergenic | 40.0% | |
| !! | AAAGCTCGTCAAGAAGTACT+CGG | - | chr4_2:1206061-1206080 | Msa0582790:CDS | 40.0% |
| GTACTCGGAACTACGATTAT+TGG | - | chr4_2:1206076-1206095 | Msa0582790:CDS | 40.0% | |
| AGGAACAATACCTAAACCTG+TGG | - | chr4_2:1206099-1206118 | Msa0582790:CDS | 40.0% | |
| ACGAGCAATCGAAAAGATTC+TGG | + | chr4_2:1206130-1206149 | None:intergenic | 40.0% | |
| GGAAGTCTTTCTCAGATACA+AGG | + | chr4_2:1206192-1206211 | None:intergenic | 40.0% | |
| AGACTTCCAGATTCAAAGGA+AGG | - | chr4_2:1206204-1206223 | Msa0582790:CDS | 40.0% | |
| GAAGGAATGTCTACACTACC+CGG | - | chr4_2:1203040-1203059 | Msa0582790:CDS | 45.0% | |
| GTTCCCAGGGAATTCATTAG+AGG | + | chr4_2:1203337-1203356 | None:intergenic | 45.0% | |
| CGTTCAGAGTTGGACCATAA+CGG | - | chr4_2:1203424-1203443 | Msa0582790:CDS | 45.0% | |
| ! | CGACAATTTGCTTGTGTAGG+CGG | - | chr4_2:1203703-1203722 | Msa0582790:CDS | 45.0% |
| GCAGCTGTCAATATATCTCG+CGG | + | chr4_2:1203871-1203890 | None:intergenic | 45.0% | |
| GCGAGATATATTGACAGCTG+CGG | - | chr4_2:1203870-1203889 | Msa0582790:CDS | 45.0% | |
| ACAGCTGCGGATCATTTGAT+TGG | - | chr4_2:1203883-1203902 | Msa0582790:CDS | 45.0% | |
| TTGAGTTATTTGGGTCCTGG+AGG | - | chr4_2:1204198-1204217 | Msa0582790:CDS | 45.0% | |
| CAAATGCGTCCATAGTGACT+AGG | + | chr4_2:1204267-1204286 | None:intergenic | 45.0% | |
| ! | ATTCCTTCCGAGGTGTCAAT+TGG | + | chr4_2:1204291-1204310 | None:intergenic | 45.0% |
| ACCTCGGAAGGAATCAATGT+AGG | - | chr4_2:1204297-1204316 | Msa0582790:CDS | 45.0% | |
| !! | TCCTACATTGATTCCTTCCG+AGG | + | chr4_2:1204301-1204320 | None:intergenic | 45.0% |
| AATCCTTGCGTGAATTGCCA+AGG | + | chr4_2:1204334-1204353 | None:intergenic | 45.0% | |
| TTGGCAATTCACGCAAGGAT+TGG | - | chr4_2:1204333-1204352 | Msa0582790:CDS | 45.0% | |
| ! | AGCACTGAATCGAGGTATTC+AGG | - | chr4_2:1204476-1204495 | Msa0582790:CDS | 45.0% |
| ! | ACTGAATCGAGGTATTCAGG+AGG | - | chr4_2:1204479-1204498 | Msa0582790:CDS | 45.0% |
| ! | AATTCTTGACGGTATCGAGC+TGG | + | chr4_2:1204516-1204535 | None:intergenic | 45.0% |
| GTCAAGCAGTTCCTCTTTCT+CGG | - | chr4_2:1204670-1204689 | Msa0582790:CDS | 45.0% | |
| GTGCATTGTTGGAACTGGAT+TGG | - | chr4_2:1204701-1204720 | Msa0582790:CDS | 45.0% | |
| AACGATCTTTCCTGCGTGTT+CGG | + | chr4_2:1204766-1204785 | None:intergenic | 45.0% | |
| GTAGCTTATATGCCATGGGA+AGG | - | chr4_2:1204990-1205009 | Msa0582790:CDS | 45.0% | |
| TGGGATCTTGGGTAGAAACA+GGG | - | chr4_2:1205204-1205223 | Msa0582790:CDS | 45.0% | |
| GAGGATTCTTTCGCCATTTG+AGG | + | chr4_2:1205254-1205273 | None:intergenic | 45.0% | |
| GAAAGAATCCTCCTATGCTC+CGG | - | chr4_2:1205262-1205281 | Msa0582790:CDS | 45.0% | |
| ACGAGCTATACTTGGGATTC+AGG | - | chr4_2:1205298-1205317 | Msa0582790:CDS | 45.0% | |
| !! | GATTCAGGTATCGACCTCAA+AGG | - | chr4_2:1205313-1205332 | Msa0582790:CDS | 45.0% |
| GCCGAGTTATTGATGTGAGA+TGG | - | chr4_2:1205369-1205388 | Msa0582790:CDS | 45.0% | |
| AAGTAGGTGATAAAGTGGCC+GGG | - | chr4_2:1205465-1205484 | Msa0582790:CDS | 45.0% | |
| AGATGGAAGACCCGTTGATA+TGG | - | chr4_2:1205550-1205569 | Msa0582790:CDS | 45.0% | |
| GGGTTGAAGACCATATCAAC+GGG | + | chr4_2:1205563-1205582 | None:intergenic | 45.0% | |
| GTACCCTCACGAATGAATGT+AGG | - | chr4_2:1205590-1205609 | Msa0582790:CDS | 45.0% | |
| CTGTCCTACATTCATTCGTG+AGG | + | chr4_2:1205597-1205616 | None:intergenic | 45.0% | |
| !! | GAATGTTCACTCGGATTAGC+TGG | - | chr4_2:1205623-1205642 | Msa0582790:CDS | 45.0% |
| CACAACAACCCCTTAAAGGA+AGG | - | chr4_2:1205930-1205949 | Msa0582790:CDS | 45.0% | |
| TGTTTCGCCCTTCCTTTAAG+GGG | + | chr4_2:1205941-1205960 | None:intergenic | 45.0% | |
| CTTGTTTCGCCCTTCCTTTA+AGG | + | chr4_2:1205943-1205962 | None:intergenic | 45.0% | |
| CTTAAAGGAAGGGCGAAACA+AGG | - | chr4_2:1205941-1205960 | Msa0582790:CDS | 45.0% | |
| CTCGGAACTACGATTATTGG+AGG | - | chr4_2:1206079-1206098 | Msa0582790:CDS | 45.0% | |
| !! | AAAGATTCTGGAGCATCCAC+AGG | + | chr4_2:1206118-1206137 | None:intergenic | 45.0% |
| CGTTCGAGAACTACGATCTT+TGG | - | chr4_2:1206147-1206166 | Msa0582790:CDS | 45.0% | |
| ! | AGAACTACGATCTTTGGCTC+TGG | - | chr4_2:1206153-1206172 | Msa0582790:CDS | 45.0% |
| ATGCTTGGGGTTGGGAATGA+AGG | - | chr4_2:1203022-1203041 | Msa0582790:CDS | 50.0% | |
| CTCTAATCTTCCCCCCCAAT+CGG | + | chr4_2:1203479-1203498 | None:intergenic | 50.0% | |
| GGATATGGGCTCGTGTAAGT+AGG | - | chr4_2:1203521-1203540 | Msa0582790:CDS | 50.0% | |
| TTTGGGTCCTGGAGGATTGA+CGG | - | chr4_2:1204206-1204225 | Msa0582790:CDS | 50.0% | |
| TGCGTCCATAGTGACTAGGA+TGG | + | chr4_2:1204263-1204282 | None:intergenic | 50.0% | |
| TGTCCAATTGACACCTCGGA+AGG | - | chr4_2:1204285-1204304 | Msa0582790:CDS | 50.0% | |
| GATCCTTGGCAATTCACGCA+AGG | - | chr4_2:1204328-1204347 | Msa0582790:CDS | 50.0% | |
| !! | TTCACGCAAGGATTGGTCCT+TGG | - | chr4_2:1204340-1204359 | Msa0582790:CDS | 50.0% |
| !! | TCACGCAAGGATTGGTCCTT+GGG | - | chr4_2:1204341-1204360 | Msa0582790:CDS | 50.0% |
| GGACTTTCTATAGACCCCCA+AGG | + | chr4_2:1204360-1204379 | None:intergenic | 50.0% | |
| ! | CACTTTTCGGACCGAGAAAG+AGG | + | chr4_2:1204684-1204703 | None:intergenic | 50.0% |
| ! | CGGTCCGAAAAGTGCATTGT+TGG | - | chr4_2:1204690-1204709 | Msa0582790:CDS | 50.0% |
| ! | AACTGGATTGGAACGCCAAG+TGG | - | chr4_2:1204713-1204732 | Msa0582790:CDS | 50.0% |
| ! | CTCCTGAATCTAAGGCCACT+TGG | + | chr4_2:1204731-1204750 | None:intergenic | 50.0% |
| AGCGGGAACTCCTGAATCTA+AGG | + | chr4_2:1204739-1204758 | None:intergenic | 50.0% | |
| CAGACTCATGTGACAAGCCA+TGG | - | chr4_2:1205101-1205120 | Msa0582790:CDS | 50.0% | |
| CTGGGATCTTGGGTAGAAAC+AGG | - | chr4_2:1205203-1205222 | Msa0582790:CDS | 50.0% | |
| GGGATCTTGGGTAGAAACAG+GGG | - | chr4_2:1205205-1205224 | Msa0582790:CDS | 50.0% | |
| TCTATCTTCCGGAGCATAGG+AGG | + | chr4_2:1205273-1205292 | None:intergenic | 50.0% | |
| GCCGGGAGACATGGAAATAA+AGG | - | chr4_2:1205482-1205501 | Msa0582790:CDS | 50.0% | |
| !! | TTCGTGAGGGTACCCCTAAT+GGG | + | chr4_2:1205583-1205602 | None:intergenic | 50.0% |
| !! | ATTCGTGAGGGTACCCCTAA+TGG | + | chr4_2:1205584-1205603 | None:intergenic | 50.0% |
| AAAGGAAGGGCGAAACAAGG+AGG | - | chr4_2:1205944-1205963 | Msa0582790:CDS | 50.0% | |
| AAACAAGGAGGACAACGGGT+AGG | - | chr4_2:1205956-1205975 | Msa0582790:CDS | 50.0% | |
| GGTAGGCGAAATGGAGGTTT+GGG | - | chr4_2:1205973-1205992 | Msa0582790:CDS | 50.0% | |
| ! | TCTGGAGCATCCACAGGTTT+AGG | + | chr4_2:1206112-1206131 | None:intergenic | 50.0% |
| TTGGGTCCTGGAGGATTGAC+GGG | - | chr4_2:1204207-1204226 | Msa0582790:CDS | 55.0% | |
| !!! | CGGGGCGAACTGCTAGTTTT+CGG | - | chr4_2:1204226-1204245 | Msa0582790:CDS | 55.0% |
| !! | CACGCAAGGATTGGTCCTTG+GGG | - | chr4_2:1204342-1204361 | Msa0582790:CDS | 55.0% |
| !! | ACGCAAGGATTGGTCCTTGG+GGG | - | chr4_2:1204343-1204362 | Msa0582790:CDS | 55.0% |
| ! | CGCCAAGTGGCCTTAGATTC+AGG | - | chr4_2:1204726-1204745 | Msa0582790:CDS | 55.0% |
| TCCTGCGTGTTCGGCTATAG+CGG | + | chr4_2:1204757-1204776 | None:intergenic | 55.0% | |
| !! | GCAGATGGTGCTGCTACTGT+TGG | - | chr4_2:1204936-1204955 | Msa0582790:CDS | 55.0% |
| !! | GATGGTGCTGCTACTGTTGG+CGG | - | chr4_2:1204939-1204958 | Msa0582790:CDS | 55.0% |
| TGTTGGCGGTGAACTCGCTT+TGG | - | chr4_2:1204953-1204972 | Msa0582790:CDS | 55.0% | |
| GTTGGCGGTGAACTCGCTTT+GGG | - | chr4_2:1204954-1204973 | Msa0582790:CDS | 55.0% | |
| GATAAAGTGGCCGGGAGACA+TGG | - | chr4_2:1205473-1205492 | Msa0582790:CDS | 55.0% | |
| TCCGCTCTTTCCCGGATACT+CGG | + | chr4_2:1205780-1205799 | None:intergenic | 55.0% | |
| GGGCGAAACAAGGAGGACAA+CGG | - | chr4_2:1205951-1205970 | Msa0582790:CDS | 55.0% | |
| GGCGAAACAAGGAGGACAAC+GGG | - | chr4_2:1205952-1205971 | Msa0582790:CDS | 55.0% | |
| AGGACAACGGGTAGGCGAAA+TGG | - | chr4_2:1205964-1205983 | Msa0582790:CDS | 55.0% | |
| ACAACGGGTAGGCGAAATGG+AGG | - | chr4_2:1205967-1205986 | Msa0582790:CDS | 55.0% | |
| GGGTAGGCGAAATGGAGGTT+TGG | - | chr4_2:1205972-1205991 | Msa0582790:CDS | 55.0% | |
| TGGGTCCTGGAGGATTGACG+GGG | - | chr4_2:1204208-1204227 | Msa0582790:CDS | 60.0% | |
| CCTGCGTGTTCGGCTATAGC+GGG | + | chr4_2:1204756-1204775 | None:intergenic | 60.0% | |
| ACTCGGCCCCTACCACCTAT+AGG | + | chr4_2:1205356-1205375 | None:intergenic | 60.0% | |
| CCGCTCTTTCCCGGATACTC+GGG | + | chr4_2:1205779-1205798 | None:intergenic | 60.0% | |
| CCCGAGTATCCGGGAAAGAG+CGG | - | chr4_2:1205776-1205795 | Msa0582790:CDS | 60.0% | |
| AATGGAGGTTTGGGCGCTCG+AGG | - | chr4_2:1205982-1206001 | Msa0582790:CDS | 60.0% | |
| ATGGAGGTTTGGGCGCTCGA+GGG | - | chr4_2:1205983-1206002 | Msa0582790:CDS | 60.0% | |
| GTTCGCCCCGTCAATCCTCC+AGG | + | chr4_2:1204216-1204235 | None:intergenic | 65.0% | |
| CCCGCTATAGCCGAACACGC+AGG | - | chr4_2:1204753-1204772 | Msa0582790:CDS | 65.0% | |
| TGGAGGTTTGGGCGCTCGAG+GGG | - | chr4_2:1205984-1206003 | Msa0582790:CDS | 65.0% | |
| GTTTGGGCGCTCGAGGGGTT+CGG | - | chr4_2:1205989-1206008 | Msa0582790:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 1203007 | 1206234 | 1203007 | ID=Msa0582790;Name=Msa0582790 |
| chr4_2 | mRNA | 1203007 | 1206234 | 1203007 | ID=Msa0582790-mRNA-1;Parent=Msa0582790;Name=Msa0582790-mRNA-1;_AED=0.38;_eAED=0.38;_QI=0|-1|0|1|-1|1|1|0|1075 |
| chr4_2 | exon | 1203007 | 1206234 | 1203007 | ID=Msa0582790-mRNA-1:exon:287;Parent=Msa0582790-mRNA-1 |
| chr4_2 | CDS | 1203007 | 1206234 | 1203007 | ID=Msa0582790-mRNA-1:cds;Parent=Msa0582790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
