AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0268820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0268820 MtrunA17_Chr4g0016641 81.192 755 24 7 56 692 321 1075 0.0 1187
Msa0268820 MtrunA17_Chr4g0016641 55.645 124 54 1 1 124 192 314 9.00e-30 126
Msa0268820 MtrunA17_CPg0493041 81.192 755 24 7 56 692 321 1075 0.0 1187
Msa0268820 MtrunA17_CPg0493041 55.645 124 54 1 1 124 192 314 9.00e-30 126
Msa0268820 MtrunA17_Chr1g0159041 71.565 313 36 6 214 517 54 322 8.81e-142 417
Msa0268820 MtrunA17_Chr4g0015531 67.961 309 32 5 55 330 20 294 2.43e-130 387
Msa0268820 MtrunA17_Chr4g0015541 87.619 210 2 1 483 692 1 186 1.07e-121 365
Msa0268820 MtrunA17_Chr1g0155911 26.957 345 202 7 324 633 791 1120 1.54e-33 138
Msa0268820 MtrunA17_Chr8g0345421 26.957 460 245 10 216 633 658 1068 9.47e-33 135
Msa0268820 MtrunA17_Chr1g0159051 93.103 58 4 0 56 113 59 116 1.02e-29 113
Msa0268820 MtrunA17_Chr4g0069391 24.307 469 281 12 219 658 719 1142 7.75e-26 114
Msa0268820 MtrunA17_Chr3g0136911 26.087 391 227 12 331 675 807 1181 5.33e-24 108
Msa0268820 MtrunA17_Chr8g0375171 24.754 509 289 17 221 675 711 1179 1.44e-23 106
Msa0268820 MtrunA17_Chr7g0247561 60.256 78 3 1 315 364 1 78 4.31e-23 93.6
Msa0268820 MtrunA17_Chr3g0142431 27.273 253 147 6 446 676 2 239 4.92e-18 84.3
Msa0268820 MtrunA17_Chr4g0015521 93.103 29 2 0 1 29 81 109 1.84e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0268820 ATCG00190.1 75.033 757 69 7 56 692 316 1072 0.0 1109
Msa0268820 ATCG00190.1 58.000 100 39 1 1 100 187 283 9.76e-25 110
Msa0268820 AT4G21710.1 26.500 400 229 9 324 673 788 1172 2.79e-34 141
Msa0268820 AT5G45140.2 24.952 517 277 14 216 671 684 1150 2.69e-30 128
Msa0268820 AT5G45140.1 24.952 517 277 14 216 671 684 1150 2.69e-30 128
Msa0268820 AT3G23780.1 23.242 512 293 13 221 676 699 1166 8.38e-24 107
Msa0268820 AT3G23780.2 23.242 512 293 13 221 676 699 1166 8.38e-24 107
Msa0268820 AT3G18090.1 23.366 505 302 13 221 676 581 1049 1.68e-23 107
Msa0268820 AT1G29940.1 31.863 204 125 4 438 634 895 1091 3.97e-23 105
Msa0268820 AT3G18090.2 22.973 296 176 7 221 493 581 847 4.25e-12 70.1
Msa0268820 AT3G18090.3 22.973 296 176 7 221 493 581 847 4.65e-12 70.1

Find 169 sgRNAs with CRISPR-Local

Find 249 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGGAGAAAATTGAGTTATT+TGG 0.135693 2_2:+70400117 Msa0268820:CDS
TGTCTAAATTTCGGAGTAAA+TGG 0.137285 2_2:-70401089 None:intergenic
CTTGTTTCGCCCTTCCTTTA+AGG 0.204769 2_2:-70401862 None:intergenic
GTTACACAACAACCCCTTAA+AGG 0.212213 2_2:+70401848 Msa0268820:CDS
TGGATTCGATGTTTGTTTAC+TGG 0.222331 2_2:-70401663 None:intergenic
ACATAAAGATTCAGGAAATA+TGG 0.234879 2_2:-70399663 None:intergenic
GTCAAAAGAAAATGCCATTT+TGG 0.238441 2_2:+70399604 Msa0268820:CDS
GAACGTTGATATCTAATTAA+TGG 0.244746 2_2:-70400767 None:intergenic
TTTGAACAGCCTGTTATAAT+AGG 0.245428 2_2:+70401749 Msa0268820:CDS
TGAATTAATTTCAAGATATA+AGG 0.248171 2_2:-70401776 None:intergenic
GGAATCAATGTAGGACTTAT+TGG 0.263649 2_2:+70400235 Msa0268820:CDS
ACGAGCTATACTTGGGATTC+AGG 0.269809 2_2:+70401221 Msa0268820:CDS
GATCTATTACAAGATCAATT+TGG 0.270369 2_2:+70399905 Msa0268820:CDS
GATTCATAAGTGGTTGTTAA+TGG 0.270524 2_2:-70400028 None:intergenic
CGATCTAAAACTTGAGATAA+TGG 0.281648 2_2:-70400067 None:intergenic
GGTCTTCCATCTTGCAAATA+AGG 0.291965 2_2:-70401461 None:intergenic
TTGTTTCGCCCTTCCTTTAA+GGG 0.292882 2_2:-70401861 None:intergenic
ATAATTCGAGGAACTATATC+TGG 0.305120 2_2:+70399953 Msa0268820:CDS
GCATCATTATGCTCGATAAA+AGG 0.305503 2_2:-70400542 None:intergenic
ATTCTGGGATCTTGGGTAAC+AGG 0.305540 2_2:+70401126 Msa0268820:CDS
ATTCGTGAGGGTACCCCTAA+TGG 0.306675 2_2:-70401503 None:intergenic
GGGAGAAAATTGAGTTATTT+GGG 0.307341 2_2:+70400118 Msa0268820:CDS
TCAAATATTCCGCTCTTTCC+CGG 0.314064 2_2:-70401707 None:intergenic
AATTCCGTACATAAAGATTC+AGG 0.323867 2_2:-70399671 None:intergenic
CGCCAAGTGGCCTTAGATTC+AGG 0.326928 2_2:+70400653 Msa0268820:CDS
CGCATTTACCTTTATGAACC+TGG 0.329782 2_2:-70400820 None:intergenic
AACGATCTTTCCTGCGTGTT+CGG 0.330632 2_2:-70400690 None:intergenic
GGAATATTTGATGGAAGAAC+AGG 0.334674 2_2:+70401719 Msa0268820:CDS
AATGAATGTAGGACAGATAT+TGG 0.340082 2_2:+70401523 Msa0268820:CDS
AAACTTCCTTCCTTTGAATC+TGG 0.340714 2_2:-70402132 None:intergenic
TCTGGAGCATCCACAGGTTT+AGG 0.340865 2_2:-70402031 None:intergenic
TCACGCAAGGATTGGTCCTT+GGG 0.341088 2_2:+70400270 Msa0268820:CDS
ACGAGCAATCGAAAAGATTC+TGG 0.342745 2_2:-70402049 None:intergenic
ATATGGTCTTCAACCCATTA+GGG 0.343228 2_2:+70401489 Msa0268820:CDS
GTCAAGCAGTTCCTCTTTCT+CGG 0.344262 2_2:+70400597 Msa0268820:CDS
CCATGAACTATTTGGGTCAA+TGG 0.354074 2_2:-70400097 None:intergenic
GTACTCGGAACTACGATTAT+TGG 0.356639 2_2:+70401998 Msa0268820:CDS
CGGTCCGAAAAGTGCATTGT+TGG 0.359288 2_2:+70400617 Msa0268820:CDS
AGCGGGAACTCCTGAATCTA+AGG 0.364603 2_2:-70400663 None:intergenic
CGTTCGAGAACTACGATCTT+TGG 0.364953 2_2:+70402069 Msa0268820:CDS
TATGCTCGATAAAAGGAATC+AGG 0.367331 2_2:-70400535 None:intergenic
TTGTCGATAAAACTCCAAAA+TGG 0.374690 2_2:-70399618 None:intergenic
TCCGCTCTTTCCCGGATACT+CGG 0.379405 2_2:-70401699 None:intergenic
TTGGGTCCTGGAGGATTGAC+GGG 0.382208 2_2:+70400136 Msa0268820:CDS
GAATGTTCACTCGGATTAGC+TGG 0.386652 2_2:+70401545 Msa0268820:CDS
GATATTTGAACCCGAGTATC+CGG 0.389575 2_2:+70401688 Msa0268820:CDS
GATATGGTCTTCAACCCATT+AGG 0.395616 2_2:+70401488 Msa0268820:CDS
GTTTGGGCGCTCGAGGGGTT+CGG 0.396040 2_2:+70401911 Msa0268820:CDS
AGATGGAAGACCCGTTGATA+TGG 0.398344 2_2:+70401472 Msa0268820:CDS
ATTCCTTCCGAGGTGTCAAT+TGG 0.403361 2_2:-70400217 None:intergenic
AGATTATTACGAGCTATACT+TGG 0.409704 2_2:+70401213 Msa0268820:CDS
TGTAGGACTTATTGGATCCT+TGG 0.411030 2_2:+70400243 Msa0268820:CDS
TCTAACTATTGCATGGGAAC+AGG 0.414074 2_2:+70400464 Msa0268820:CDS
GAAAAGTGCATTGTTGGAAC+TGG 0.419529 2_2:+70400623 Msa0268820:CDS
TTCACGCAAGGATTGGTCCT+TGG 0.420745 2_2:+70400269 Msa0268820:CDS
TTTGGGTCCTGGAGGATTGA+CGG 0.423824 2_2:+70400135 Msa0268820:CDS
GAATTGTGATTCTGGGATCT+TGG 0.426630 2_2:+70401118 Msa0268820:CDS
ATGGAGGTTTGGGCGCTCGA+GGG 0.426714 2_2:+70401905 Msa0268820:CDS
GTCTAAATTTCGGAGTAAAT+GGG 0.428736 2_2:-70401088 None:intergenic
TATGTCTTTCCTCAATGAAA+AGG 0.429238 2_2:+70399565 Msa0268820:CDS
AACTATTTGGGTCAATGGAT+TGG 0.429624 2_2:-70400092 None:intergenic
GCCGGGAGACATGGAAATAA+AGG 0.429982 2_2:+70401404 Msa0268820:CDS
CCATTGACCCAAATAGTTCA+TGG 0.431227 2_2:+70400097 Msa0268820:CDS
TTCGTGAGGGTACCCCTAAT+GGG 0.434009 2_2:-70401502 None:intergenic
ATTATAACAGGCTGTTCAAA+AGG 0.436541 2_2:-70401746 None:intergenic
AGGACAACGGGTAGGCGAAA+TGG 0.436703 2_2:+70401886 Msa0268820:CDS
GAGGATTCTTTCGCCATTTG+AGG 0.441108 2_2:-70401174 None:intergenic
CATAAAGATTCAGGAAATAT+GGG 0.442441 2_2:-70399662 None:intergenic
GATATCCATCCTAGTCACTA+TGG 0.449002 2_2:+70400184 Msa0268820:CDS
ACCTTTATTTCCATGTCTCC+CGG 0.449391 2_2:-70401405 None:intergenic
AAATTGAGTTATTTGGGTCC+TGG 0.453699 2_2:+70400124 Msa0268820:CDS
AATGGAGGTTTGGGCGCTCG+AGG 0.461267 2_2:+70401904 Msa0268820:CDS
GCTCGTAATAATCTATCTTC+CGG 0.462719 2_2:-70401204 None:intergenic
GGTAGGCGAAATGGAGGTTT+GGG 0.465784 2_2:+70401895 Msa0268820:CDS
GGGTAGGCGAAATGGAGGTT+TGG 0.465926 2_2:+70401894 Msa0268820:CDS
GGGTAAATTAACGCCTCAAA+TGG 0.467677 2_2:+70401161 Msa0268820:CDS
GATCTAAAACTTGAGATAAT+GGG 0.468332 2_2:-70400066 None:intergenic
GGAAAGAGCGGAATATTTGA+TGG 0.469164 2_2:+70401710 Msa0268820:CDS
ATTACAAGATCAATTTGGAT+TGG 0.471878 2_2:+70399910 Msa0268820:CDS
CCGCTCTTTCCCGGATACTC+GGG 0.478316 2_2:-70401698 None:intergenic
AAGAATTTCTAACTATTGCA+TGG 0.481440 2_2:+70400457 Msa0268820:CDS
GGCGAAACAAGGAGGACAAC+GGG 0.481846 2_2:+70401874 Msa0268820:CDS
CCTGCGTGTTCGGCTATAGC+GGG 0.483049 2_2:-70400680 None:intergenic
CGTTTAGAAAATATAATTCG+AGG 0.485783 2_2:+70399941 Msa0268820:CDS
TTCTGGGATCTTGGGTAACA+GGG 0.487124 2_2:+70401127 Msa0268820:CDS
TGTTCATATCTCTCATCAAA+AGG 0.491842 2_2:-70401599 None:intergenic
TTGGCAATTCACGCAAGGAT+TGG 0.498707 2_2:+70400262 Msa0268820:CDS
CAAGTTGATGATAAAATACA+TGG 0.502523 2_2:+70401800 Msa0268820:CDS
AATTGTGATTCTGGGATCTT+GGG 0.504452 2_2:+70401119 Msa0268820:CDS
GTGCATTGTTGGAACTGGAT+TGG 0.504759 2_2:+70400628 Msa0268820:CDS
TGGAGGTTTGGGCGCTCGAG+GGG 0.505858 2_2:+70401906 Msa0268820:CDS
CTCCTGAATCTAAGGCCACT+TGG 0.506387 2_2:-70400655 None:intergenic
TGTACTCATTAGTGAACGTC+TGG 0.512500 2_2:+70400957 Msa0268820:CDS
AGAACTACGATCTTTGGCTC+TGG 0.513829 2_2:+70402075 Msa0268820:CDS
GTTCGCCCCGTCAATCCTCC+AGG 0.515843 2_2:-70400142 None:intergenic
GATATGCCTTATTTGCAAGA+TGG 0.518600 2_2:+70401455 Msa0268820:CDS
TATTAGTAGCTTATATGCCA+TGG 0.519177 2_2:+70400911 Msa0268820:intron
GTAAACAAACATCGAATCCA+TGG 0.519391 2_2:+70401666 Msa0268820:CDS
CAGAAACGTGAAATTAAAGT+AGG 0.520965 2_2:+70401371 Msa0268820:intron
CGACAATTTGCTTGTGTAGG+CGG 0.527978 2_2:+70399635 Msa0268820:CDS
AAAGTAGGTGATAAAGTGGC+CGG 0.529519 2_2:+70401386 Msa0268820:CDS
GCATTTACCTTTATGAACCT+GGG 0.530323 2_2:-70400819 None:intergenic
AAAGATTCTGGAGCATCCAC+AGG 0.531781 2_2:-70402037 None:intergenic
GATAAAGTGGCCGGGAGACA+TGG 0.532845 2_2:+70401395 Msa0268820:CDS
AGAAAGACTTCCAGATTCAA+AGG 0.533242 2_2:+70402122 Msa0268820:CDS
GGGTTGAAGACCATATCAAC+GGG 0.535156 2_2:-70401482 None:intergenic
CACAACAACCCCTTAAAGGA+AGG 0.535519 2_2:+70401852 Msa0268820:CDS
AATTCTTGACGGTATCGAGC+TGG 0.536702 2_2:-70400441 None:intergenic
CAATAGTTAGAAATTCTTGA+CGG 0.539101 2_2:-70400452 None:intergenic
TAATCTATCTTCCGGAGCAT+AGG 0.540322 2_2:-70401196 None:intergenic
TCTATCTTCCGGAGCATAGG+AGG 0.540370 2_2:-70401193 None:intergenic
TACTCGGGTTCAAATATCCA+TGG 0.546454 2_2:-70401683 None:intergenic
TCCTGCGTGTTCGGCTATAG+CGG 0.549505 2_2:-70400681 None:intergenic
AGAATTTCTAACTATTGCAT+GGG 0.549733 2_2:+70400458 Msa0268820:CDS
CAGATATTGGAATGTTCACT+CGG 0.551609 2_2:+70401536 Msa0268820:CDS
TAGTGATTCTTTCAGGACCA+TGG 0.551937 2_2:-70401044 None:intergenic
TATCGACAATTTGCTTGTGT+AGG 0.554239 2_2:+70399632 Msa0268820:CDS
CATTGACCCAAATAGTTCAT+GGG 0.556065 2_2:+70400098 Msa0268820:CDS
GATTATTACGAGCTATACTT+GGG 0.558504 2_2:+70401214 Msa0268820:CDS
CTCGGAACTACGATTATTGG+AGG 0.559077 2_2:+70402001 Msa0268820:CDS
AGACTTCCAGATTCAAAGGA+AGG 0.563377 2_2:+70402126 Msa0268820:CDS
GTCACTAAATTCTGAGGAGT+AGG 0.563396 2_2:-70399998 None:intergenic
GGAAGTCTTTCTCAGATACA+AGG 0.565963 2_2:-70402111 None:intergenic
AACAAGTGCATAATGTCCAC+TGG 0.566338 2_2:-70401828 None:intergenic
TGTTTCGCCCTTCCTTTAAG+GGG 0.567625 2_2:-70401860 None:intergenic
AATGTTCACTCGGATTAGCT+GGG 0.569063 2_2:+70401546 Msa0268820:CDS
GAAAGAATCCTCCTATGCTC+CGG 0.570879 2_2:+70401185 Msa0268820:CDS
TCCTACATTGATTCCTTCCG+AGG 0.572209 2_2:-70400227 None:intergenic
CAAATGCGTCCATAGTGACT+AGG 0.573493 2_2:-70400193 None:intergenic
CTTAAAGGAAGGGCGAAACA+AGG 0.579473 2_2:+70401863 Msa0268820:CDS
AATTAAAGTAGGTGATAAAG+TGG 0.581077 2_2:+70401382 Msa0268820:CDS
ATATTTGAACCCGAGTATCC+GGG 0.581389 2_2:+70401689 Msa0268820:CDS
CAGACTCATGTGACAAGCCA+TGG 0.581560 2_2:+70401027 Msa0268820:CDS
CTGTCCTACATTCATTCGTG+AGG 0.583153 2_2:-70401516 None:intergenic
AGTAAATGGGCTTCTAGATG+TGG 0.584284 2_2:-70401075 None:intergenic
CCCGAGTATCCGGGAAAGAG+CGG 0.584519 2_2:+70401698 Msa0268820:CDS
TGTCCAATTGACACCTCGGA+AGG 0.584582 2_2:+70400214 Msa0268820:CDS
GTCTTTCCTCAATGAAAAGG+AGG 0.586724 2_2:+70399568 Msa0268820:CDS
ATGCTCGATAAAAGGAATCA+GGG 0.587469 2_2:-70400534 None:intergenic
TCAGAATTGTAACCTTCCCA+TGG 0.596416 2_2:-70400928 None:intergenic
ATTAGTAGCTTATATGCCAT+GGG 0.596673 2_2:+70400912 Msa0268820:intron
AAGTAGGTGATAAAGTGGCC+GGG 0.597954 2_2:+70401387 Msa0268820:CDS
GGGCGAAACAAGGAGGACAA+CGG 0.598993 2_2:+70401873 Msa0268820:CDS
GTAGCTTATATGCCATGGGA+AGG 0.611195 2_2:+70400916 Msa0268820:intron
TGTCCTACATTCATTCGTGA+GGG 0.611498 2_2:-70401515 None:intergenic
GATCCTTGGCAATTCACGCA+AGG 0.614349 2_2:+70400257 Msa0268820:CDS
AAAATACATGGACGTTCCAG+TGG 0.614997 2_2:+70401812 Msa0268820:CDS
AACTGGATTGGAACGCCAAG+TGG 0.615266 2_2:+70400640 Msa0268820:CDS
GTTGAAGTCACTAAATTCTG+AGG 0.617323 2_2:-70400004 None:intergenic
TGATGAGAGATATGAACAGG+AGG 0.620223 2_2:+70401604 Msa0268820:CDS
AATCCTTGCGTGAATTGCCA+AGG 0.621341 2_2:-70400260 None:intergenic
CATTTGTCCAATTGACACCT+CGG 0.622149 2_2:+70400210 Msa0268820:CDS
GTACCCTCACGAATGAATGT+AGG 0.622385 2_2:+70401512 Msa0268820:CDS
TGGGTTGAAGACCATATCAA+CGG 0.622611 2_2:-70401483 None:intergenic
TGCGTCCATAGTGACTAGGA+TGG 0.626242 2_2:-70400189 None:intergenic
AAACAAGGAGGACAACGGGT+AGG 0.626804 2_2:+70401878 Msa0268820:CDS
TTGAGTTATTTGGGTCCTGG+AGG 0.630319 2_2:+70400127 Msa0268820:CDS
TGGGTCCTGGAGGATTGACG+GGG 0.631061 2_2:+70400137 Msa0268820:CDS
ACAACAACCCCTTAAAGGAA+GGG 0.636584 2_2:+70401853 Msa0268820:CDS
ACCTCGGAAGGAATCAATGT+AGG 0.642821 2_2:+70400226 Msa0268820:CDS
CACGCAAGGATTGGTCCTTG+GGG 0.650600 2_2:+70400271 Msa0268820:CDS
TCTGGGATCTTGGGTAACAG+GGG 0.650699 2_2:+70401128 Msa0268820:CDS
AGGAACAATACCTAAACCTG+TGG 0.656849 2_2:+70402021 Msa0268820:CDS
AAAGCTCGTCAAGAAGTACT+CGG 0.659322 2_2:+70401983 Msa0268820:CDS
ACAACGGGTAGGCGAAATGG+AGG 0.659407 2_2:+70401889 Msa0268820:CDS
TATGGTCTTCAACCCATTAG+GGG 0.670295 2_2:+70401490 Msa0268820:CDS
CCCGCTATAGCCGAACACGC+AGG 0.684746 2_2:+70400680 Msa0268820:CDS
GAATATTTGATGGAAGAACA+GGG 0.689025 2_2:+70401720 Msa0268820:CDS
AAAGGAAGGGCGAAACAAGG+AGG 0.708508 2_2:+70401866 Msa0268820:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAATTAATTTCAAGATATA+AGG - chr2_2:70401779-70401798 None:intergenic 15.0%
!! AAAAGGAGGAAAAAAAAATA+GGG + chr2_2:70399582-70399601 Msa0268820:CDS 20.0%
!! TAACAAAAATGTATTGTTCT+CGG - chr2_2:70399778-70399797 None:intergenic 20.0%
!!! AAGATCATTTTATTTGGAAA+TGG + chr2_2:70400728-70400747 Msa0268820:CDS 20.0%
!!! AGATCATTTTATTTGGAAAT+GGG + chr2_2:70400729-70400748 Msa0268820:CDS 20.0%
!!! ATTTTATTAGTGATTCTTTC+AGG - chr2_2:70401054-70401073 None:intergenic 20.0%
!!! TTCCATTTTTGTCTAAATTT+CGG - chr2_2:70401101-70401120 None:intergenic 20.0%
!! ATATATATATGAATCGTTTC+TGG - chr2_2:70401348-70401367 None:intergenic 20.0%
! AGGAAAGACATAAAAAATTC+GGG - chr2_2:70399557-70399576 None:intergenic 25.0%
! GAGGAAAGACATAAAAAATT+CGG - chr2_2:70399558-70399577 None:intergenic 25.0%
! GAAAAGGAGGAAAAAAAAAT+AGG + chr2_2:70399581-70399600 Msa0268820:CDS 25.0%
! CATAAAGATTCAGGAAATAT+GGG - chr2_2:70399665-70399684 None:intergenic 25.0%
! ACATAAAGATTCAGGAAATA+TGG - chr2_2:70399666-70399685 None:intergenic 25.0%
! ATTTCCTGAATCTTTATGTA+CGG + chr2_2:70399667-70399686 Msa0268820:intron 25.0%
! TTTCAACAAAGATGTGAATT+AGG + chr2_2:70399706-70399725 Msa0268820:intron 25.0%
! AACAAAAATGTATTGTTCTC+GGG - chr2_2:70399777-70399796 None:intergenic 25.0%
! CATTTGATTGGAATGAAATT+TGG + chr2_2:70399825-70399844 Msa0268820:intron 25.0%
!! ATTGGAATGAAATTTGGAAT+GGG + chr2_2:70399831-70399850 Msa0268820:intron 25.0%
! GATCTATTACAAGATCAATT+TGG + chr2_2:70399905-70399924 Msa0268820:CDS 25.0%
! ATTACAAGATCAATTTGGAT+TGG + chr2_2:70399910-70399929 Msa0268820:CDS 25.0%
! CGTTTAGAAAATATAATTCG+AGG + chr2_2:70399941-70399960 Msa0268820:CDS 25.0%
!! GATCTAAAACTTGAGATAAT+GGG - chr2_2:70400069-70400088 None:intergenic 25.0%
! CTCTCAGAAATTTCAAAAAA+TGG - chr2_2:70400309-70400328 None:intergenic 25.0%
! ATATAGTATTCATCTCTACT+TGG - chr2_2:70400363-70400382 None:intergenic 25.0%
! AAGTAGAGATGAATACTATA+TGG + chr2_2:70400362-70400381 Msa0268820:intron 25.0%
! CAATAGTTAGAAATTCTTGA+CGG - chr2_2:70400455-70400474 None:intergenic 25.0%
! AAGAATTTCTAACTATTGCA+TGG + chr2_2:70400457-70400476 Msa0268820:CDS 25.0%
! AGAATTTCTAACTATTGCAT+GGG + chr2_2:70400458-70400477 Msa0268820:CDS 25.0%
!! TCCTTCCAATATTTTTCTAT+TGG + chr2_2:70400506-70400525 Msa0268820:CDS 25.0%
! TCCAATAGAAAAATATTGGA+AGG - chr2_2:70400510-70400529 None:intergenic 25.0%
! AAGCTCCAATAGAAAAATAT+TGG - chr2_2:70400514-70400533 None:intergenic 25.0%
!! ACTGACAAGATCATTTTATT+TGG + chr2_2:70400722-70400741 Msa0268820:CDS 25.0%
! GAACGTTGATATCTAATTAA+TGG - chr2_2:70400770-70400789 None:intergenic 25.0%
! TAAAGGTAAATGCGTAAAAA+AGG + chr2_2:70400829-70400848 Msa0268820:intron 25.0%
! AAAGGTAAATGCGTAAAAAA+GGG + chr2_2:70400830-70400849 Msa0268820:intron 25.0%
! AAAAATGGAATTGTGATTCT+GGG + chr2_2:70401111-70401130 Msa0268820:CDS 25.0%
! AATTAAAGTAGGTGATAAAG+TGG + chr2_2:70401382-70401401 Msa0268820:CDS 25.0%
!! TAAGGTTTTCCTATTATAAC+AGG - chr2_2:70401761-70401780 None:intergenic 25.0%
!!! CAAGTTGATGATAAAATACA+TGG + chr2_2:70401800-70401819 Msa0268820:CDS 25.0%
GGAAAGACATAAAAAATTCG+GGG - chr2_2:70399556-70399575 None:intergenic 30.0%
TATGTCTTTCCTCAATGAAA+AGG + chr2_2:70399565-70399584 Msa0268820:CDS 30.0%
!!! TTTTTTCCTCCTTTTCATTG+AGG - chr2_2:70399577-70399596 None:intergenic 30.0%
!! GTCAAAAGAAAATGCCATTT+TGG + chr2_2:70399604-70399623 Msa0268820:CDS 30.0%
TTGTCGATAAAACTCCAAAA+TGG - chr2_2:70399621-70399640 None:intergenic 30.0%
AATTCCGTACATAAAGATTC+AGG - chr2_2:70399674-70399693 None:intergenic 30.0%
AACAAAGATGTGAATTAGGA+GGG + chr2_2:70399710-70399729 Msa0268820:intron 30.0%
GTATATCAATGTTCAGTCTT+CGG - chr2_2:70399755-70399774 None:intergenic 30.0%
GATTGGAATGAAATTTGGAA+TGG + chr2_2:70399830-70399849 Msa0268820:intron 30.0%
ATCTTGTAATAGATCTGCTA+CGG - chr2_2:70399900-70399919 None:intergenic 30.0%
ATAATTCGAGGAACTATATC+TGG + chr2_2:70399953-70399972 Msa0268820:CDS 30.0%
GATTCATAAGTGGTTGTTAA+TGG - chr2_2:70400031-70400050 None:intergenic 30.0%
!!! ACCACTTATGAATCGTTTTT+TGG + chr2_2:70400037-70400056 Msa0268820:CDS 30.0%
TCCAAAAAACGATTCATAAG+TGG - chr2_2:70400041-70400060 None:intergenic 30.0%
! CGATCTAAAACTTGAGATAA+TGG - chr2_2:70400070-70400089 None:intergenic 30.0%
! TTTTCTCCCATGAACTATTT+GGG - chr2_2:70400107-70400126 None:intergenic 30.0%
! ATTTTCTCCCATGAACTATT+TGG - chr2_2:70400108-70400127 None:intergenic 30.0%
TGGGAGAAAATTGAGTTATT+TGG + chr2_2:70400117-70400136 Msa0268820:CDS 30.0%
GGGAGAAAATTGAGTTATTT+GGG + chr2_2:70400118-70400137 Msa0268820:CDS 30.0%
!!! AATTTTTTAGCACTGAATCG+AGG + chr2_2:70400396-70400415 Msa0268820:intron 30.0%
!! ATGCATGCAAGTATTTTTGT+TGG - chr2_2:70400792-70400811 None:intergenic 30.0%
TATTAGTAGCTTATATGCCA+TGG + chr2_2:70400911-70400930 Msa0268820:intron 30.0%
ATTAGTAGCTTATATGCCAT+GGG + chr2_2:70400912-70400931 Msa0268820:intron 30.0%
GTCTAAATTTCGGAGTAAAT+GGG - chr2_2:70401091-70401110 None:intergenic 30.0%
TGTCTAAATTTCGGAGTAAA+TGG - chr2_2:70401092-70401111 None:intergenic 30.0%
CTCCGAAATTTAGACAAAAA+TGG + chr2_2:70401096-70401115 Msa0268820:CDS 30.0%
CAAAAATGGAATTGTGATTC+TGG + chr2_2:70401110-70401129 Msa0268820:CDS 30.0%
AGATTATTACGAGCTATACT+TGG + chr2_2:70401213-70401232 Msa0268820:CDS 30.0%
GATTATTACGAGCTATACTT+GGG + chr2_2:70401214-70401233 Msa0268820:CDS 30.0%
! TTTTAGACAAGTTTCCTTTG+AGG - chr2_2:70401253-70401272 None:intergenic 30.0%
! ACTTGTCTAAAACTACCTAT+AGG + chr2_2:70401261-70401280 Msa0268820:intron 30.0%
CAGAAACGTGAAATTAAAGT+AGG + chr2_2:70401371-70401390 Msa0268820:intron 30.0%
! TTCAAAGATTTTGTCTAGAC+AGG + chr2_2:70401433-70401452 Msa0268820:CDS 30.0%
AATGAATGTAGGACAGATAT+TGG + chr2_2:70401523-70401542 Msa0268820:CDS 30.0%
TGTTCATATCTCTCATCAAA+AGG - chr2_2:70401602-70401621 None:intergenic 30.0%
! TTTTGATGAGAGATATGAAC+AGG + chr2_2:70401601-70401620 Msa0268820:CDS 30.0%
! TTCAGAAAACACAAGTTTTC+TGG - chr2_2:70401633-70401652 None:intergenic 30.0%
GAATATTTGATGGAAGAACA+GGG + chr2_2:70401720-70401739 Msa0268820:CDS 30.0%
ATTATAACAGGCTGTTCAAA+AGG - chr2_2:70401749-70401768 None:intergenic 30.0%
TTTGAACAGCCTGTTATAAT+AGG + chr2_2:70401749-70401768 Msa0268820:CDS 30.0%
! TATCGACAATTTGCTTGTGT+AGG + chr2_2:70399632-70399651 Msa0268820:CDS 35.0%
CAACAAAGATGTGAATTAGG+AGG + chr2_2:70399709-70399728 Msa0268820:intron 35.0%
TTCAGTCTTCGGTCATATTT+CGG - chr2_2:70399744-70399763 None:intergenic 35.0%
GTTGAAGTCACTAAATTCTG+AGG - chr2_2:70400007-70400026 None:intergenic 35.0%
AACTATTTGGGTCAATGGAT+TGG - chr2_2:70400095-70400114 None:intergenic 35.0%
CATTGACCCAAATAGTTCAT+GGG + chr2_2:70400098-70400117 Msa0268820:CDS 35.0%
AAATTGAGTTATTTGGGTCC+TGG + chr2_2:70400124-70400143 Msa0268820:CDS 35.0%
GGAATCAATGTAGGACTTAT+TGG + chr2_2:70400235-70400254 Msa0268820:CDS 35.0%
! TGAATACTATATGGTAGCGA+CGG + chr2_2:70400371-70400390 Msa0268820:intron 35.0%
ATGCTCGATAAAAGGAATCA+GGG - chr2_2:70400537-70400556 None:intergenic 35.0%
TATGCTCGATAAAAGGAATC+AGG - chr2_2:70400538-70400557 None:intergenic 35.0%
GCATCATTATGCTCGATAAA+AGG - chr2_2:70400545-70400564 None:intergenic 35.0%
! AGTTCCAACAATGCACTTTT+CGG - chr2_2:70400624-70400643 None:intergenic 35.0%
CAAAAATCCCAGGTTCATAA+AGG + chr2_2:70400812-70400831 Msa0268820:CDS 35.0%
GCATTTACCTTTATGAACCT+GGG - chr2_2:70400822-70400841 None:intergenic 35.0%
!! AAGGGACAAATTTTAGCAGA+TGG + chr2_2:70400848-70400867 Msa0268820:intron 35.0%
!! AATTGTGATTCTGGGATCTT+GGG + chr2_2:70401119-70401138 Msa0268820:CDS 35.0%
!!! GTAACAGGGGATATTTTAGT+GGG + chr2_2:70401141-70401160 Msa0268820:CDS 35.0%
GCTCGTAATAATCTATCTTC+CGG - chr2_2:70401207-70401226 None:intergenic 35.0%
! TGTCTAAAACTACCTATAGG+TGG + chr2_2:70401264-70401283 Msa0268820:intron 35.0%
TAAAACTACCTATAGGTGGT+AGG + chr2_2:70401268-70401287 Msa0268820:intron 35.0%
AAAACTACCTATAGGTGGTA+GGG + chr2_2:70401269-70401288 Msa0268820:intron 35.0%
TCCATCTCACATCAATAACT+CGG - chr2_2:70401296-70401315 None:intergenic 35.0%
AGATGGATCCAAAAAAAAGC+AGG + chr2_2:70401309-70401328 Msa0268820:intron 35.0%
!!! AGCTAGAACCTGCTTTTTTT+TGG - chr2_2:70401320-70401339 None:intergenic 35.0%
!! GATATGCCTTATTTGCAAGA+TGG + chr2_2:70401455-70401474 Msa0268820:CDS 35.0%
ATATGGTCTTCAACCCATTA+GGG + chr2_2:70401489-70401508 Msa0268820:CDS 35.0%
CAGATATTGGAATGTTCACT+CGG + chr2_2:70401536-70401555 Msa0268820:CDS 35.0%
TGGATTCGATGTTTGTTTAC+TGG - chr2_2:70401666-70401685 None:intergenic 35.0%
GTAAACAAACATCGAATCCA+TGG + chr2_2:70401666-70401685 Msa0268820:CDS 35.0%
GGAATATTTGATGGAAGAAC+AGG + chr2_2:70401719-70401738 Msa0268820:CDS 35.0%
AGAAAGACTTCCAGATTCAA+AGG + chr2_2:70402122-70402141 Msa0268820:CDS 35.0%
AAACTTCCTTCCTTTGAATC+TGG - chr2_2:70402135-70402154 None:intergenic 35.0%
GTCTTTCCTCAATGAAAAGG+AGG + chr2_2:70399568-70399587 Msa0268820:CDS 40.0%
AGATGTGAATTAGGAGGGAT+TGG + chr2_2:70399715-70399734 Msa0268820:intron 40.0%
! GTCACTAAATTCTGAGGAGT+AGG - chr2_2:70400001-70400020 None:intergenic 40.0%
CCATGAACTATTTGGGTCAA+TGG - chr2_2:70400100-70400119 None:intergenic 40.0%
CCATTGACCCAAATAGTTCA+TGG + chr2_2:70400097-70400116 Msa0268820:CDS 40.0%
!!! GAACTGCTAGTTTTCGGATA+CGG + chr2_2:70400161-70400180 Msa0268820:CDS 40.0%
!!! AACTGCTAGTTTTCGGATAC+GGG + chr2_2:70400162-70400181 Msa0268820:CDS 40.0%
GATATCCATCCTAGTCACTA+TGG + chr2_2:70400184-70400203 Msa0268820:CDS 40.0%
CATTTGTCCAATTGACACCT+CGG + chr2_2:70400210-70400229 Msa0268820:CDS 40.0%
TGTAGGACTTATTGGATCCT+TGG + chr2_2:70400243-70400262 Msa0268820:CDS 40.0%
! GAATACTATATGGTAGCGAC+GGG + chr2_2:70400372-70400391 Msa0268820:intron 40.0%
TCTAACTATTGCATGGGAAC+AGG + chr2_2:70400464-70400483 Msa0268820:CDS 40.0%
! GAAAAGTGCATTGTTGGAAC+TGG + chr2_2:70400623-70400642 Msa0268820:CDS 40.0%
TTGCATGCATCAAAAATCCC+AGG + chr2_2:70400802-70400821 Msa0268820:CDS 40.0%
CGCATTTACCTTTATGAACC+TGG - chr2_2:70400823-70400842 None:intergenic 40.0%
TCAGAATTGTAACCTTCCCA+TGG - chr2_2:70400931-70400950 None:intergenic 40.0%
TGTACTCATTAGTGAACGTC+TGG + chr2_2:70400957-70400976 Msa0268820:CDS 40.0%
TAGTGATTCTTTCAGGACCA+TGG - chr2_2:70401047-70401066 None:intergenic 40.0%
! AGTAAATGGGCTTCTAGATG+TGG - chr2_2:70401078-70401097 None:intergenic 40.0%
!! GAATTGTGATTCTGGGATCT+TGG + chr2_2:70401118-70401137 Msa0268820:CDS 40.0%
!! GGTAACAGGGGATATTTTAG+TGG + chr2_2:70401140-70401159 Msa0268820:CDS 40.0%
GGGTAAATTAACGCCTCAAA+TGG + chr2_2:70401161-70401180 Msa0268820:CDS 40.0%
TAATCTATCTTCCGGAGCAT+AGG - chr2_2:70401199-70401218 None:intergenic 40.0%
AAACTACCTATAGGTGGTAG+GGG + chr2_2:70401270-70401289 Msa0268820:intron 40.0%
AAAGTAGGTGATAAAGTGGC+CGG + chr2_2:70401386-70401405 Msa0268820:CDS 40.0%
! ACCTTTATTTCCATGTCTCC+CGG - chr2_2:70401408-70401427 None:intergenic 40.0%
GGTCTTCCATCTTGCAAATA+AGG - chr2_2:70401464-70401483 None:intergenic 40.0%
! TGGGTTGAAGACCATATCAA+CGG - chr2_2:70401486-70401505 None:intergenic 40.0%
GATATGGTCTTCAACCCATT+AGG + chr2_2:70401488-70401507 Msa0268820:CDS 40.0%
TATGGTCTTCAACCCATTAG+GGG + chr2_2:70401490-70401509 Msa0268820:CDS 40.0%
TGTCCTACATTCATTCGTGA+GGG - chr2_2:70401518-70401537 None:intergenic 40.0%
!! AATGTTCACTCGGATTAGCT+GGG + chr2_2:70401546-70401565 Msa0268820:CDS 40.0%
TGATGAGAGATATGAACAGG+AGG + chr2_2:70401604-70401623 Msa0268820:CDS 40.0%
TACTCGGGTTCAAATATCCA+TGG - chr2_2:70401686-70401705 None:intergenic 40.0%
GATATTTGAACCCGAGTATC+CGG + chr2_2:70401688-70401707 Msa0268820:CDS 40.0%
ATATTTGAACCCGAGTATCC+GGG + chr2_2:70401689-70401708 Msa0268820:CDS 40.0%
TCAAATATTCCGCTCTTTCC+CGG - chr2_2:70401710-70401729 None:intergenic 40.0%
GGAAAGAGCGGAATATTTGA+TGG + chr2_2:70401710-70401729 Msa0268820:CDS 40.0%
AAAATACATGGACGTTCCAG+TGG + chr2_2:70401812-70401831 Msa0268820:CDS 40.0%
AACAAGTGCATAATGTCCAC+TGG - chr2_2:70401831-70401850 None:intergenic 40.0%
GTTACACAACAACCCCTTAA+AGG + chr2_2:70401848-70401867 Msa0268820:CDS 40.0%
ACAACAACCCCTTAAAGGAA+GGG + chr2_2:70401853-70401872 Msa0268820:CDS 40.0%
TTGTTTCGCCCTTCCTTTAA+GGG - chr2_2:70401864-70401883 None:intergenic 40.0%
!! AAAGCTCGTCAAGAAGTACT+CGG + chr2_2:70401983-70402002 Msa0268820:CDS 40.0%
GTACTCGGAACTACGATTAT+TGG + chr2_2:70401998-70402017 Msa0268820:CDS 40.0%
AGGAACAATACCTAAACCTG+TGG + chr2_2:70402021-70402040 Msa0268820:CDS 40.0%
ACGAGCAATCGAAAAGATTC+TGG - chr2_2:70402052-70402071 None:intergenic 40.0%
GGAAGTCTTTCTCAGATACA+AGG - chr2_2:70402114-70402133 None:intergenic 40.0%
AGACTTCCAGATTCAAAGGA+AGG + chr2_2:70402126-70402145 Msa0268820:CDS 40.0%
! CGACAATTTGCTTGTGTAGG+CGG + chr2_2:70399635-70399654 Msa0268820:CDS 45.0%
GCAGCTGTCAATATATCTCG+CGG - chr2_2:70399801-70399820 None:intergenic 45.0%
GCGAGATATATTGACAGCTG+CGG + chr2_2:70399800-70399819 Msa0268820:intron 45.0%
ACAGCTGCGGATCATTTGAT+TGG + chr2_2:70399813-70399832 Msa0268820:intron 45.0%
TTGAGTTATTTGGGTCCTGG+AGG + chr2_2:70400127-70400146 Msa0268820:CDS 45.0%
CAAATGCGTCCATAGTGACT+AGG - chr2_2:70400196-70400215 None:intergenic 45.0%
! ATTCCTTCCGAGGTGTCAAT+TGG - chr2_2:70400220-70400239 None:intergenic 45.0%
ACCTCGGAAGGAATCAATGT+AGG + chr2_2:70400226-70400245 Msa0268820:CDS 45.0%
!! TCCTACATTGATTCCTTCCG+AGG - chr2_2:70400230-70400249 None:intergenic 45.0%
AATCCTTGCGTGAATTGCCA+AGG - chr2_2:70400263-70400282 None:intergenic 45.0%
TTGGCAATTCACGCAAGGAT+TGG + chr2_2:70400262-70400281 Msa0268820:CDS 45.0%
TGGACTTTCTATAGACCCCA+AGG - chr2_2:70400289-70400308 None:intergenic 45.0%
! AGCACTGAATCGAGGTATTC+AGG + chr2_2:70400404-70400423 Msa0268820:intron 45.0%
! ACTGAATCGAGGTATTCAGG+AGG + chr2_2:70400407-70400426 Msa0268820:intron 45.0%
! AATTCTTGACGGTATCGAGC+TGG - chr2_2:70400444-70400463 None:intergenic 45.0%
GTCAAGCAGTTCCTCTTTCT+CGG + chr2_2:70400597-70400616 Msa0268820:CDS 45.0%
GTGCATTGTTGGAACTGGAT+TGG + chr2_2:70400628-70400647 Msa0268820:CDS 45.0%
AACGATCTTTCCTGCGTGTT+CGG - chr2_2:70400693-70400712 None:intergenic 45.0%
GTAGCTTATATGCCATGGGA+AGG + chr2_2:70400916-70400935 Msa0268820:intron 45.0%
!! ATTCTGGGATCTTGGGTAAC+AGG + chr2_2:70401126-70401145 Msa0268820:CDS 45.0%
!! TTCTGGGATCTTGGGTAACA+GGG + chr2_2:70401127-70401146 Msa0268820:CDS 45.0%
GAGGATTCTTTCGCCATTTG+AGG - chr2_2:70401177-70401196 None:intergenic 45.0%
GAAAGAATCCTCCTATGCTC+CGG + chr2_2:70401185-70401204 Msa0268820:CDS 45.0%
ACGAGCTATACTTGGGATTC+AGG + chr2_2:70401221-70401240 Msa0268820:CDS 45.0%
!! GATTCAGGTATCGACCTCAA+AGG + chr2_2:70401236-70401255 Msa0268820:intron 45.0%
GCCGAGTTATTGATGTGAGA+TGG + chr2_2:70401292-70401311 Msa0268820:intron 45.0%
AAGTAGGTGATAAAGTGGCC+GGG + chr2_2:70401387-70401406 Msa0268820:CDS 45.0%
AGATGGAAGACCCGTTGATA+TGG + chr2_2:70401472-70401491 Msa0268820:CDS 45.0%
GGGTTGAAGACCATATCAAC+GGG - chr2_2:70401485-70401504 None:intergenic 45.0%
GTACCCTCACGAATGAATGT+AGG + chr2_2:70401512-70401531 Msa0268820:CDS 45.0%
CTGTCCTACATTCATTCGTG+AGG - chr2_2:70401519-70401538 None:intergenic 45.0%
!! GAATGTTCACTCGGATTAGC+TGG + chr2_2:70401545-70401564 Msa0268820:CDS 45.0%
CACAACAACCCCTTAAAGGA+AGG + chr2_2:70401852-70401871 Msa0268820:CDS 45.0%
TGTTTCGCCCTTCCTTTAAG+GGG - chr2_2:70401863-70401882 None:intergenic 45.0%
CTTGTTTCGCCCTTCCTTTA+AGG - chr2_2:70401865-70401884 None:intergenic 45.0%
CTTAAAGGAAGGGCGAAACA+AGG + chr2_2:70401863-70401882 Msa0268820:CDS 45.0%
CTCGGAACTACGATTATTGG+AGG + chr2_2:70402001-70402020 Msa0268820:CDS 45.0%
!! AAAGATTCTGGAGCATCCAC+AGG - chr2_2:70402040-70402059 None:intergenic 45.0%
CGTTCGAGAACTACGATCTT+TGG + chr2_2:70402069-70402088 Msa0268820:CDS 45.0%
! AGAACTACGATCTTTGGCTC+TGG + chr2_2:70402075-70402094 Msa0268820:CDS 45.0%
TTTGGGTCCTGGAGGATTGA+CGG + chr2_2:70400135-70400154 Msa0268820:CDS 50.0%
TGCGTCCATAGTGACTAGGA+TGG - chr2_2:70400192-70400211 None:intergenic 50.0%
TGTCCAATTGACACCTCGGA+AGG + chr2_2:70400214-70400233 Msa0268820:CDS 50.0%
GATCCTTGGCAATTCACGCA+AGG + chr2_2:70400257-70400276 Msa0268820:CDS 50.0%
!! TTCACGCAAGGATTGGTCCT+TGG + chr2_2:70400269-70400288 Msa0268820:CDS 50.0%
!! TCACGCAAGGATTGGTCCTT+GGG + chr2_2:70400270-70400289 Msa0268820:CDS 50.0%
! CACTTTTCGGACCGAGAAAG+AGG - chr2_2:70400611-70400630 None:intergenic 50.0%
! CGGTCCGAAAAGTGCATTGT+TGG + chr2_2:70400617-70400636 Msa0268820:CDS 50.0%
! AACTGGATTGGAACGCCAAG+TGG + chr2_2:70400640-70400659 Msa0268820:CDS 50.0%
! CTCCTGAATCTAAGGCCACT+TGG - chr2_2:70400658-70400677 None:intergenic 50.0%
AGCGGGAACTCCTGAATCTA+AGG - chr2_2:70400666-70400685 None:intergenic 50.0%
CAGACTCATGTGACAAGCCA+TGG + chr2_2:70401027-70401046 Msa0268820:CDS 50.0%
! TCTGGGATCTTGGGTAACAG+GGG + chr2_2:70401128-70401147 Msa0268820:CDS 50.0%
TCTATCTTCCGGAGCATAGG+AGG - chr2_2:70401196-70401215 None:intergenic 50.0%
GCCGGGAGACATGGAAATAA+AGG + chr2_2:70401404-70401423 Msa0268820:CDS 50.0%
!! TTCGTGAGGGTACCCCTAAT+GGG - chr2_2:70401505-70401524 None:intergenic 50.0%
!! ATTCGTGAGGGTACCCCTAA+TGG - chr2_2:70401506-70401525 None:intergenic 50.0%
AAAGGAAGGGCGAAACAAGG+AGG + chr2_2:70401866-70401885 Msa0268820:CDS 50.0%
AAACAAGGAGGACAACGGGT+AGG + chr2_2:70401878-70401897 Msa0268820:CDS 50.0%
GGTAGGCGAAATGGAGGTTT+GGG + chr2_2:70401895-70401914 Msa0268820:CDS 50.0%
! TCTGGAGCATCCACAGGTTT+AGG - chr2_2:70402034-70402053 None:intergenic 50.0%
TTGGGTCCTGGAGGATTGAC+GGG + chr2_2:70400136-70400155 Msa0268820:CDS 55.0%
!!! CGGGGCGAACTGCTAGTTTT+CGG + chr2_2:70400155-70400174 Msa0268820:CDS 55.0%
!! CACGCAAGGATTGGTCCTTG+GGG + chr2_2:70400271-70400290 Msa0268820:CDS 55.0%
! CGCCAAGTGGCCTTAGATTC+AGG + chr2_2:70400653-70400672 Msa0268820:CDS 55.0%
TCCTGCGTGTTCGGCTATAG+CGG - chr2_2:70400684-70400703 None:intergenic 55.0%
!! GCAGATGGTGCTGCTACTGT+TGG + chr2_2:70400863-70400882 Msa0268820:intron 55.0%
!! GATGGTGCTGCTACTGTTGG+CGG + chr2_2:70400866-70400885 Msa0268820:intron 55.0%
TGTTGGCGGTGAACTCGCTT+TGG + chr2_2:70400880-70400899 Msa0268820:intron 55.0%
GTTGGCGGTGAACTCGCTTT+GGG + chr2_2:70400881-70400900 Msa0268820:intron 55.0%
GATAAAGTGGCCGGGAGACA+TGG + chr2_2:70401395-70401414 Msa0268820:CDS 55.0%
TCCGCTCTTTCCCGGATACT+CGG - chr2_2:70401702-70401721 None:intergenic 55.0%
GGGCGAAACAAGGAGGACAA+CGG + chr2_2:70401873-70401892 Msa0268820:CDS 55.0%
GGCGAAACAAGGAGGACAAC+GGG + chr2_2:70401874-70401893 Msa0268820:CDS 55.0%
AGGACAACGGGTAGGCGAAA+TGG + chr2_2:70401886-70401905 Msa0268820:CDS 55.0%
ACAACGGGTAGGCGAAATGG+AGG + chr2_2:70401889-70401908 Msa0268820:CDS 55.0%
GGGTAGGCGAAATGGAGGTT+TGG + chr2_2:70401894-70401913 Msa0268820:CDS 55.0%
TGGGTCCTGGAGGATTGACG+GGG + chr2_2:70400137-70400156 Msa0268820:CDS 60.0%
CCTGCGTGTTCGGCTATAGC+GGG - chr2_2:70400683-70400702 None:intergenic 60.0%
ACTCGGCCCCTACCACCTAT+AGG - chr2_2:70401279-70401298 None:intergenic 60.0%
CCGCTCTTTCCCGGATACTC+GGG - chr2_2:70401701-70401720 None:intergenic 60.0%
CCCGAGTATCCGGGAAAGAG+CGG + chr2_2:70401698-70401717 Msa0268820:CDS 60.0%
AATGGAGGTTTGGGCGCTCG+AGG + chr2_2:70401904-70401923 Msa0268820:CDS 60.0%
ATGGAGGTTTGGGCGCTCGA+GGG + chr2_2:70401905-70401924 Msa0268820:CDS 60.0%
GTTCGCCCCGTCAATCCTCC+AGG - chr2_2:70400145-70400164 None:intergenic 65.0%
CCCGCTATAGCCGAACACGC+AGG + chr2_2:70400680-70400699 Msa0268820:CDS 65.0%
TGGAGGTTTGGGCGCTCGAG+GGG + chr2_2:70401906-70401925 Msa0268820:CDS 65.0%
GTTTGGGCGCTCGAGGGGTT+CGG + chr2_2:70401911-70401930 Msa0268820:CDS 65.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 70399512 70402156 70399512 ID=Msa0268820;Name=Msa0268820
chr2_2 mRNA 70399512 70402156 70399512 ID=Msa0268820-mRNA-1;Parent=Msa0268820;Name=Msa0268820-mRNA-1;_AED=0.42;_eAED=0.44;_QI=0|0|0|1|1|1|5|0|692
chr2_2 exon 70399512 70399683 70399512 ID=Msa0268820-mRNA-1:exon:22624;Parent=Msa0268820-mRNA-1
chr2_2 exon 70399903 70400292 70399903 ID=Msa0268820-mRNA-1:exon:22625;Parent=Msa0268820-mRNA-1
chr2_2 exon 70400426 70400833 70400426 ID=Msa0268820-mRNA-1:exon:22626;Parent=Msa0268820-mRNA-1
chr2_2 exon 70400917 70401242 70400917 ID=Msa0268820-mRNA-1:exon:22627;Parent=Msa0268820-mRNA-1
chr2_2 exon 70401374 70402156 70401374 ID=Msa0268820-mRNA-1:exon:22628;Parent=Msa0268820-mRNA-1
chr2_2 CDS 70399512 70399683 70399512 ID=Msa0268820-mRNA-1:cds;Parent=Msa0268820-mRNA-1
chr2_2 CDS 70399903 70400292 70399903 ID=Msa0268820-mRNA-1:cds;Parent=Msa0268820-mRNA-1
chr2_2 CDS 70400426 70400833 70400426 ID=Msa0268820-mRNA-1:cds;Parent=Msa0268820-mRNA-1
chr2_2 CDS 70400917 70401242 70400917 ID=Msa0268820-mRNA-1:cds;Parent=Msa0268820-mRNA-1
chr2_2 CDS 70401374 70402156 70401374 ID=Msa0268820-mRNA-1:cds;Parent=Msa0268820-mRNA-1
Gene Sequence

>Msa0268820

ATGGGTTCGAATTTAAGCGAAATTCTTGAGAACGTTTGCTACCCCGAATTTTTTATGTCTTTCCTCAATGAAAAGGAGGAAAAAAAAATAGGGTCAAAAGAAAATGCCATTTTGGAGTTTTATCGACAATTTGCTTGTGTAGGCGGAGATCCCATATTTCCTGAATCTTTATCAGATCTATTACAAGATCAATTTGGATTGGCTCTCGTTCGTTTAGAAAATATAATTCGAGGAACTATATCTGGAGCAATTAGATATAAATTGATACCTACTCCTCAGAATTTAGTGACTTCAACTCCATTAACAACCACTTATGAATCGTTTTTTGGATTACACCCATTATCTCAAGTTTTAGATCGAACCAATCCATTGACCCAAATAGTTCATGGGAGAAAATTGAGTTATTTGGGTCCTGGAGGATTGACGGGGCGAACTGCTAGTTTTCGGATACGGGATATCCATCCTAGTCACTATGGACGCATTTGTCCAATTGACACCTCGGAAGGAATCAATGTAGGACTTATTGGATCCTTGGCAATTCACGCAAGGATTGGTCCTTGGGGAGGAGCAGATTGTTCCAGCTCGATACCGTCAAGAATTTCTAACTATTGCATGGGAACAGGTTCATCTTCGAAGTATTTTTCCTTCCAATATTTTTCTATTGGAGCTTCCCTGATTCCTTTTATCGAGCATAATGATGCGAATCGAGCTTTAATGAGTTCTAATATGCAACGTCAAGCAGTTCCTCTTTCTCGGTCCGAAAAGTGCATTGTTGGAACTGGATTGGAACGCCAAGTGGCCTTAGATTCAGGAGTTCCCGCTATAGCCGAACACGCAGGAAAGATCGTTTATAACGATACTGACAAGATCATTTTATTTGGAAATGGGAATGCTCTAAGTATTCCATTAATTAGATATCAACGTTCCAACAAAAATACTTGCATGCATCAAAAATCCCAGGTTCATAAAGTAGCTTATATGCCATGGGAAGGTTACAATTCTGAAGATGCTGTACTCATTAGTGAACGTCTGGTCTATGAAGATATTTATACTTCTTTTCACATACGTAAATATGAAATTCAGACTCATGTGACAAGCCATGGTCCTGAAAGAATCACTAATAAAATTCCACATCTAGAAGCCCATTTACTCCGAAATTTAGACAAAAATGGAATTGTGATTCTGGGATCTTGGGTAACAGGGGATATTTTAGTGGGTAAATTAACGCCTCAAATGGCGAAAGAATCCTCCTATGCTCCGGAAGATAGATTATTACGAGCTATACTTGGGATTCAGAAACGTGAAATTAAAGTAGGTGATAAAGTGGCCGGGAGACATGGAAATAAAGGTATCGTTTCAAAGATTTTGTCTAGACAGGATATGCCTTATTTGCAAGATGGAAGACCCGTTGATATGGTCTTCAACCCATTAGGGGTACCCTCACGAATGAATGTAGGACAGATATTGGAATGTTCACTCGGATTAGCTGGGAGTATGCTAAATAGACATTATCGAATAGCACCTTTTGATGAGAGATATGAACAGGAGGCTTCCAGAAAACTTGTGTTTTCTGAATTATATGAAGCCAGTAAACAAACATCGAATCCATGGATATTTGAACCCGAGTATCCGGGAAAGAGCGGAATATTTGATGGAAGAACAGGGAATCCTTTTGAACAGCCTGTTATAATAGGAAAACCTTATATCTTGAAATTAATTCATCAAGTTGATGATAAAATACATGGACGTTCCAGTGGACATTATGCACTTGTTACACAACAACCCCTTAAAGGAAGGGCGAAACAAGGAGGACAACGGGTAGGCGAAATGGAGGTTTGGGCGCTCGAGGGGTTCGGTGTTGCTCATATTTTACAAGAGATGCTGACTTATAAATCTGATCATATTAAAGCTCGTCAAGAAGTACTCGGAACTACGATTATTGGAGGAACAATACCTAAACCTGTGGATGCTCCAGAATCTTTTCGATTGCTCGTTCGAGAACTACGATCTTTGGCTCTGGAACTGAATCATTTCCTTGTATCTGAGAAAGACTTCCAGATTCAAAGGAAGGAAGTTTAA
Protein sequence

>Msa0268820

MGSNLSEILENVCYPEFFMSFLNEKEEKKIGSKENAILEFYRQFACVGGDPIFPESLSDLLQDQFGLALVRLENIIRGTISGAIRYKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGPWGGADCSSSIPSRISNYCMGTGSSSKYFSFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQVALDSGVPAIAEHAGKIVYNDTDKIILFGNGNALSIPLIRYQRSNKNTCMHQKSQVHKVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSHGPERITNKIPHLEAHLLRNLDKNGIVILGSWVTGDILVGKLTPQMAKESSYAPEDRLLRAILGIQKREIKVGDKVAGRHGNKGIVSKILSRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQILECSLGLAGSMLNRHYRIAPFDERYEQEASRKLVFSELYEASKQTSNPWIFEPEYPGKSGIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLKGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIKARQEVLGTTIIGGTIPKPVDAPESFRLLVRELRSLALELNHFLVSEKDFQIQRKEV*