AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0928730

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0928730 MtrunA17_Chr6g0473021 99.105 894 6 2 1 892 1 894 0.0 1781
Msa0928730 MtrunA17_Chr3g0125831 37.479 587 288 18 317 848 323 885 1.49e-100 333
Msa0928730 MtrunA17_Chr1g0159441 51.579 285 132 4 306 590 322 600 3.05e-98 328
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0928730 AT5G62090.1 51.329 602 212 18 304 891 281 815 3.26e-178 536
Msa0928730 AT5G62090.2 51.329 602 212 18 304 891 281 815 3.26e-178 536
Msa0928730 AT5G62090.3 51.329 602 212 18 304 891 281 815 3.26e-178 536
Msa0928730 AT4G25515.1 46.851 794 303 18 95 882 1 681 5.89e-178 530
Msa0928730 AT4G25520.1 45.765 850 302 24 75 881 9 742 1.61e-177 531
Msa0928730 AT4G25520.2 45.765 850 302 24 75 881 9 742 1.61e-177 531
Msa0928730 AT1G43850.2 54.647 269 116 4 317 585 304 566 3.50e-94 316
Msa0928730 AT1G43850.1 54.647 269 116 4 317 585 304 566 3.50e-94 316

Find 246 sgRNAs with CRISPR-Local

Find 406 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCAACCTTGGTCCGGTTTC+TGG 0.004417 6_2:-74733606 Msa0928730:CDS
GTAACTGTGGATTACGATTT+TGG 0.087200 6_2:+74733058 None:intergenic
TCAAACAATATTAGTATTTC+TGG 0.136306 6_2:-74733408 Msa0928730:CDS
AGCAGGTGGGATATATTATT+TGG 0.184102 6_2:+74733171 None:intergenic
GAATATGGCAAAGAATAATT+TGG 0.196446 6_2:-74729275 Msa0928730:CDS
CAAAGAAGTGCAAGCATTAA+TGG 0.207098 6_2:-74733474 Msa0928730:CDS
AAGAAGCTGGTGAGGGATTC+TGG 0.224369 6_2:+74729593 None:intergenic
GCAAAGAATAATTTGGGTTT+TGG 0.226566 6_2:-74729268 Msa0928730:CDS
ACTCAACTTGTCAGTGTAAT+TGG 0.226766 6_2:-74728965 Msa0928730:three_prime_UTR
CTCCATTTGTGGTTGGAGTT+TGG 0.238832 6_2:+74729242 None:intergenic
CATCAGAAGATTCTGGTAAT+TGG 0.243250 6_2:+74729684 None:intergenic
AGACTTAACGTAGTCAAATT+TGG 0.255462 6_2:-74731765 Msa0928730:CDS
CCAGCTTCTTTGCAAGGTGC+TGG 0.274078 6_2:-74729580 Msa0928730:CDS
TTTGAGCAACCTGAACTAAT+TGG 0.280593 6_2:+74730884 None:intergenic
TGCAAAAGGGTCCTGACTGC+TGG 0.282814 6_2:-74730408 Msa0928730:intron
CCAACCTTGGTCCGGTTTCT+GGG 0.289752 6_2:-74733605 Msa0928730:CDS
CATAAGCAGTAATCACAATA+TGG 0.296648 6_2:-74729755 Msa0928730:CDS
CTCAATTTGTCTATTGTTTG+AGG 0.306265 6_2:-74733855 Msa0928730:five_prime_UTR
TTTGCCTCATCAGAAGATTC+TGG 0.314520 6_2:+74729677 None:intergenic
CAGCTTCTTTGCAAGGTGCT+GGG 0.325798 6_2:-74729579 Msa0928730:CDS
GCCAATGGTCAAGGAAATAA+TGG 0.328082 6_2:-74729211 Msa0928730:CDS
AAGATTTGTTAGAACTTTGC+AGG 0.331751 6_2:-74730328 Msa0928730:intron
AATATGGCAAAGAATAATTT+GGG 0.333666 6_2:-74729274 Msa0928730:CDS
GGCAATCGTGGTGCTTTGAC+TGG 0.346085 6_2:-74729733 Msa0928730:CDS
CGCTTTCTTTAACAGTGATC+TGG 0.346150 6_2:-74729023 Msa0928730:CDS
TACTAGTAGATTACACTTGC+AGG 0.347743 6_2:+74728763 None:intergenic
CGTGAAGTAAGATTTCCTTC+TGG 0.348949 6_2:-74731702 Msa0928730:CDS
TCATCTGCTGTTGCAGTGAT+TGG 0.350351 6_2:+74729377 None:intergenic
AAATTTGACTACGTTAAGTC+TGG 0.354883 6_2:+74731767 None:intergenic
GTGAAGTAAGATTTCCTTCT+GGG 0.355713 6_2:-74731701 Msa0928730:CDS
AAAATCTCTAAAGCACCTAT+TGG 0.356672 6_2:+74728809 None:intergenic
TACCTCCCATGGCACCTTCT+CGG 0.358757 6_2:-74733767 Msa0928730:exon
GAAACTGCATTCGCTGAGCC+TGG 0.360815 6_2:+74732947 None:intergenic
GCTCAATCATCATCAAGTTC+TGG 0.361407 6_2:-74733729 Msa0928730:CDS
ACATATCCTGCAGTAGTTGC+TGG 0.363947 6_2:+74729353 None:intergenic
TTTGGAAATCTTAGAGAAAG+AGG 0.365537 6_2:-74733899 Msa0928730:five_prime_UTR
ACCCAATGTAAGTGGGAATA+TGG 0.366855 6_2:-74729290 Msa0928730:CDS
AAATCTGGAAGAAGGGGATT+TGG 0.370643 6_2:-74731915 Msa0928730:intron
GACATATGCGGAACTAAATC+TGG 0.370733 6_2:-74731930 Msa0928730:CDS
AAATCGTAATCCACAGTTAC+AGG 0.371291 6_2:-74733055 Msa0928730:CDS
GCAGGTTTGTCGGTGAAGTT+TGG 0.376597 6_2:-74733917 Msa0928730:five_prime_UTR
TGCTTGCACTTCTTTGCATA+TGG 0.377246 6_2:+74733481 None:intergenic
CACACACTCTTGAACTGCTT+TGG 0.381564 6_2:+74731659 None:intergenic
GGCAGAGCCTCCTCCATTTG+TGG 0.385110 6_2:+74729231 None:intergenic
ACAGGTCAACCAATTAGTTC+AGG 0.385319 6_2:-74730893 Msa0928730:intron
GCCATATTCCCACTTACATT+GGG 0.386693 6_2:+74729289 None:intergenic
GCGTCAGCTTGCGAAGAGTT+TGG 0.390189 6_2:-74730385 Msa0928730:CDS
ACCTCCCATGGCACCTTCTC+GGG 0.391943 6_2:-74733766 Msa0928730:exon
GCTGCTGTAGTGAGGGTAGA+TGG 0.399221 6_2:+74729491 None:intergenic
GATGAGCCAGCTTGAGAAGC+AGG 0.407901 6_2:+74733267 None:intergenic
CAGGCACTTGTGCACCCGTT+TGG 0.413768 6_2:+74733238 None:intergenic
TTGAGTCAGTCATGGCTTCC+AGG 0.414836 6_2:+74728982 None:intergenic
AAACTGTTACTCCTTGAAAC+AGG 0.415397 6_2:+74729187 None:intergenic
AAAGCGCTGTCTGTGAAGTC+AGG 0.416020 6_2:+74729040 None:intergenic
TGCCATATTCCCACTTACAT+TGG 0.423079 6_2:+74729288 None:intergenic
ACCTCAACAAAATCACTCTC+AGG 0.424286 6_2:-74729413 Msa0928730:CDS
GGCCAAACTCCAACCACAAA+TGG 0.432260 6_2:-74729244 Msa0928730:CDS
CACTTAATGAGCGCTGTTGA+AGG 0.436350 6_2:+74729446 None:intergenic
TTCACGGGTGCACAAGTGCC+TGG 0.440431 6_2:-74733210 Msa0928730:CDS
ACAGAGGAACCATCCATTGC+AGG 0.441574 6_2:+74733381 None:intergenic
TGTGAAGTCAGGGGCAAAAT+CGG 0.442003 6_2:+74729051 None:intergenic
TGAAAGATTTGTTGCTGAGC+CGG 0.442598 6_2:+74732979 None:intergenic
ATTTGTTTCTTCAGCATGCT+TGG 0.442668 6_2:-74731959 Msa0928730:intron
ATGGCACCTTCTCGGGTGGC+AGG 0.443888 6_2:-74733759 Msa0928730:CDS
CCGTATGACGGTGGTGGTGT+TGG 0.444476 6_2:-74732835 Msa0928730:CDS
GGCTCATCTTCGCACCAAAC+GGG 0.445319 6_2:-74733252 Msa0928730:CDS
AGGATAATAGTATTGCATAT+TGG 0.445753 6_2:-74732498 Msa0928730:CDS
CTGCTGCCGCTGCTGTAGTG+AGG 0.446365 6_2:+74729483 None:intergenic
GTCATGACTCTTACTCCAAT+AGG 0.447795 6_2:-74728824 Msa0928730:three_prime_UTR
CTTATGTGATTGTTTGATCC+AGG 0.449065 6_2:+74729772 None:intergenic
CCTTCTCGATGAAGTGAGCC+AGG 0.450422 6_2:+74729637 None:intergenic
TGGCTCATCTTCGCACCAAA+CGG 0.451424 6_2:-74733253 Msa0928730:CDS
AGGTTGGAATGACCAGTTCC+AGG 0.452566 6_2:+74733621 None:intergenic
GACTCTTCTGCAGCAGCTGG+TGG 0.454343 6_2:-74729145 Msa0928730:CDS
CAAACAATATTAGTATTTCT+GGG 0.454378 6_2:-74733407 Msa0928730:CDS
ACGGAAGAGATATTGTTGTT+TGG 0.456283 6_2:-74728721 Msa0928730:three_prime_UTR
GAAAGATTTGTTGCTGAGCC+GGG 0.456474 6_2:+74732980 None:intergenic
TCTTCTGCAGCAGCTGGTGG+AGG 0.457790 6_2:-74729142 Msa0928730:CDS
GAGAAAGAGGAGATACAGTC+AGG 0.458752 6_2:-74733886 Msa0928730:five_prime_UTR
CTGCTGTAGTGAGGGTAGAT+GGG 0.459396 6_2:+74729492 None:intergenic
CAGTGATCTGGATGATAACA+TGG 0.459525 6_2:-74729011 Msa0928730:CDS
AGGATATGTCAAATAACAAT+GGG 0.460590 6_2:-74729339 Msa0928730:CDS
AAGCTGATGGCATTGAATCC+TGG 0.462617 6_2:-74729790 Msa0928730:CDS
CCCCTTGGTGATTGGAATCA+AGG 0.464760 6_2:+74733793 None:intergenic
CGTATTTACTCAAGACCTAA+AGG 0.464821 6_2:-74731595 Msa0928730:intron
ATCGGAAGCAACGTCTTGTA+AGG 0.467151 6_2:+74729069 None:intergenic
TTTCTTGGGATTTCTGTGTA+AGG 0.470095 6_2:-74731482 Msa0928730:CDS
GTCGCTGTCTTTGATGATAG+AGG 0.470148 6_2:+74732782 None:intergenic
TGGTCATTCCAACCTTGGTC+CGG 0.471673 6_2:-74733613 Msa0928730:CDS
GAAATAATGGACCTGTTTCA+AGG 0.474603 6_2:-74729198 Msa0928730:CDS
CCCAGAAACCGGACCAAGGT+TGG 0.476077 6_2:+74733605 None:intergenic
GTAGATTACACTTGCAGGCC+AGG 0.476217 6_2:+74728768 None:intergenic
CAAACGGGTGCACAAGTGCC+TGG 0.476595 6_2:-74733237 Msa0928730:CDS
GATGCAAATTCTGCACTCTC+TGG 0.480557 6_2:-74733510 Msa0928730:CDS
AGCTTCTTTGCAAGGTGCTG+GGG 0.481337 6_2:-74729578 Msa0928730:CDS
TGCATATTGGAGAAAATTTG+TGG 0.481757 6_2:-74732485 Msa0928730:CDS
ACAAGTGCCTGGATCTTTCA+CGG 0.484466 6_2:-74733226 Msa0928730:CDS
TGCTGCCGCTGCTGTAGTGA+GGG 0.489285 6_2:+74729484 None:intergenic
ATAAGCAGTAATCACAATAT+GGG 0.492121 6_2:-74729754 Msa0928730:CDS
TATTTCTGGGTCACCTGCAA+TGG 0.492304 6_2:-74733394 Msa0928730:CDS
AAAACTGACCGTAGTTGCCT+GGG 0.493407 6_2:+74732378 None:intergenic
GGTGAATTCTGCATAGAGCC+TGG 0.493626 6_2:+74729544 None:intergenic
TCCATTATTTCCTTGACCAT+TGG 0.493782 6_2:+74729210 None:intergenic
CGGAACTAAATCTGGAAGAA+GGG 0.496413 6_2:-74731922 Msa0928730:CDS
TGGGCCATCACAAGCTGCTA+TGG 0.497990 6_2:-74729713 Msa0928730:CDS
TCTGCAGCAGCTGGTGGAGG+CGG 0.500960 6_2:-74729139 Msa0928730:CDS
GCTGGTGGAGGCGGCAACAA+TGG 0.501813 6_2:-74729130 Msa0928730:CDS
GGATCTTGAGTGAAAGATCC+AGG 0.501934 6_2:+74733192 None:intergenic
TCTAACACTATACCTGGAAC+TGG 0.502243 6_2:-74733633 Msa0928730:CDS
GCGGAACTAAATCTGGAAGA+AGG 0.502603 6_2:-74731923 Msa0928730:CDS
GCAGAATCAACAGAAGCTGC+AGG 0.503705 6_2:-74733313 Msa0928730:CDS
CCCTCACCAGCTTCTTTGCA+AGG 0.504492 6_2:-74729586 Msa0928730:CDS
CAGAGTACAATTTCTGAAAG+TGG 0.504850 6_2:-74730856 Msa0928730:CDS
AAAGATGCAGGAGATGGAAC+AGG 0.505007 6_2:-74729857 Msa0928730:CDS
TTCGAGGAAGAAGTTCTTCG+TGG 0.507746 6_2:+74731457 None:intergenic
GAGCCTCCTCCATTTGTGGT+TGG 0.509004 6_2:+74729235 None:intergenic
TTATTCATATCCCCAGAAAC+CGG 0.509783 6_2:+74733594 None:intergenic
GCAAAAGGGTCCTGACTGCT+GGG 0.509818 6_2:-74730407 Msa0928730:intron
CCAGCACCTTGCAAAGAAGC+TGG 0.510142 6_2:+74729580 None:intergenic
TTTCTGAAAGTGGGTCAGAT+GGG 0.511298 6_2:-74730846 Msa0928730:CDS
CATAGTGGACCCAATGTAAG+TGG 0.512009 6_2:-74729298 Msa0928730:CDS
TCTGGGTCACCTGCAATGGA+TGG 0.512455 6_2:-74733390 Msa0928730:CDS
CAAATGATGCAGCCCTCGGC+TGG 0.512950 6_2:-74732868 Msa0928730:CDS
AAACTGCATTCGCTGAGCCT+GGG 0.515879 6_2:+74732948 None:intergenic
TGTGCACCCGTGAAAGATCC+AGG 0.516894 6_2:+74733219 None:intergenic
AATTATTTAGACTCAAAAGA+AGG 0.517001 6_2:-74728671 Msa0928730:three_prime_UTR
GTAAATGACAAGGGTGAGGC+GGG 0.517125 6_2:+74733432 None:intergenic
AGTGACTCTTCTGCAGCAGC+TGG 0.518460 6_2:-74729148 Msa0928730:CDS
GATCACAACGTTGGAGCACT+TGG 0.519657 6_2:-74730133 Msa0928730:intron
TCGAAAGTTAGTTGCACCAC+AGG 0.521019 6_2:-74731439 Msa0928730:intron
GCGACATATCAGATGTCCTC+TGG 0.526090 6_2:+74729101 None:intergenic
CAAGGTAGCTATCGTAAGCC+AGG 0.529043 6_2:+74733811 None:intergenic
TTCTGGTTTGAGTTACTGAA+AGG 0.529945 6_2:+74729610 None:intergenic
ATTTCTGAAAGTGGGTCAGA+TGG 0.531570 6_2:-74730847 Msa0928730:CDS
GATGATCCAGCAACTACTGC+AGG 0.531746 6_2:-74729359 Msa0928730:CDS
TGTGGTGCAACTAACTTTCG+AGG 0.533250 6_2:+74731441 None:intergenic
AATCTTTCAGTCGTTGCCCC+CGG 0.533553 6_2:-74732998 Msa0928730:CDS
GCAAACTCAGCGCCAAGTGT+TGG 0.535607 6_2:-74733552 Msa0928730:CDS
AACTCAATGAATTCAAGCCC+TGG 0.537180 6_2:-74729655 Msa0928730:CDS
AATGCAAAAGATGCAGGAGA+TGG 0.538660 6_2:-74729863 Msa0928730:CDS
TATCTCTTCCGTGTGTTGCA+CGG 0.540165 6_2:+74728732 None:intergenic
GCTGGGGCTGCTATAATCCC+AGG 0.542056 6_2:-74729562 Msa0928730:CDS
GAGATGGAACAGGCAGCAAA+TGG 0.542386 6_2:-74729847 Msa0928730:CDS
AGCAACAACAGCAAATGCAG+AGG 0.545148 6_2:-74732906 Msa0928730:CDS
GGAACTGGTCATTCCAACCT+TGG 0.546176 6_2:-74733618 Msa0928730:CDS
TATGACGGTGGTGGTGTTGG+AGG 0.547754 6_2:-74732832 Msa0928730:CDS
GGGGTAAAACACCAGCTGAA+TGG 0.548295 6_2:+74732398 None:intergenic
GGAGGCTCTGCCAATGGTCA+AGG 0.550765 6_2:-74729220 Msa0928730:CDS
CACTTTCAGAAATTGTACTC+TGG 0.552295 6_2:+74730857 None:intergenic
AAAGATTTGTTGCTGAGCCG+GGG 0.553303 6_2:+74732981 None:intergenic
AACTCATCTAACACTATACC+TGG 0.553687 6_2:-74733639 Msa0928730:CDS
GCACCTTCTCGGGTGGCAGG+AGG 0.555371 6_2:-74733756 Msa0928730:CDS
AGATGATATAATGCAACAGC+AGG 0.555604 6_2:-74733121 Msa0928730:CDS
AAACCTCCTGCCACCCGAGA+AGG 0.557804 6_2:+74733753 None:intergenic
GCTCCAAATGCAAAAGATGC+AGG 0.558369 6_2:-74729869 Msa0928730:CDS
CAGGATATGTCAAATAACAA+TGG 0.558761 6_2:-74729340 Msa0928730:CDS
GCTACAATCACTAAATGACT+TGG 0.559114 6_2:-74730361 Msa0928730:CDS
GCCACCCGAGAAGGTGCCAT+GGG 0.559219 6_2:+74733762 None:intergenic
CTGGCTCACTTCATCGAGAA+GGG 0.559974 6_2:-74729636 Msa0928730:CDS
TGCCACCCGAGAAGGTGCCA+TGG 0.561510 6_2:+74733761 None:intergenic
CTGGTTTGAGTTACTGAAAG+GGG 0.562385 6_2:+74729612 None:intergenic
AACGTTGGACACCATTCAGC+TGG 0.563736 6_2:-74732409 Msa0928730:CDS
AAGCGCTGTCTGTGAAGTCA+GGG 0.568237 6_2:+74729041 None:intergenic
AGAGTACAATTTCTGAAAGT+GGG 0.568485 6_2:-74730855 Msa0928730:CDS
CAGCTTCGTGTTGTTCGTGA+GGG 0.569042 6_2:-74731630 Msa0928730:CDS
CCTGGCTCACTTCATCGAGA+AGG 0.569293 6_2:-74729637 Msa0928730:CDS
ACCTTGATTCCAATCACCAA+GGG 0.569360 6_2:-74733794 Msa0928730:five_prime_UTR
AACGTAGTCAAATTTGGTGG+TGG 0.570431 6_2:-74731759 Msa0928730:CDS
CAACCTTGGTCCGGTTTCTG+GGG 0.570652 6_2:-74733604 Msa0928730:CDS
TCTGGTTTGAGTTACTGAAA+GGG 0.570960 6_2:+74729611 None:intergenic
GGTGTGAAGCGTCCGTATGA+CGG 0.573196 6_2:-74732847 Msa0928730:CDS
CAAGTGCCTGGATCTTTCAC+GGG 0.575073 6_2:-74733225 Msa0928730:CDS
CCAACACCACCACCGTCATA+CGG 0.576793 6_2:+74732835 None:intergenic
ACCCGAGAAGGTGCCATGGG+AGG 0.577327 6_2:+74733765 None:intergenic
GTGAATTCTGCATAGAGCCT+GGG 0.577345 6_2:+74729545 None:intergenic
TCCCATGGCACCTTCTCGGG+TGG 0.577436 6_2:-74733763 Msa0928730:exon
GTTTCTGGGGATATGAATAA+CGG 0.578565 6_2:-74733591 Msa0928730:CDS
ACCTTGCAAAGAAGCTGGTG+AGG 0.579868 6_2:+74729585 None:intergenic
CTACAATCACTAAATGACTT+GGG 0.582087 6_2:-74730360 Msa0928730:CDS
GCAGCTTCGTGTTGTTCGTG+AGG 0.582229 6_2:-74731631 Msa0928730:CDS
GCAATCGTGGTGCTTTGACT+GGG 0.583617 6_2:-74729732 Msa0928730:CDS
CTTAACGTAGTCAAATTTGG+TGG 0.585857 6_2:-74731762 Msa0928730:CDS
AATTTGACTACGTTAAGTCT+GGG 0.586300 6_2:+74731768 None:intergenic
AAAGAACTAGCTCCAACACT+TGG 0.586342 6_2:+74733540 None:intergenic
AAACACACTTAATAAGCTGA+TGG 0.587295 6_2:-74729803 Msa0928730:CDS
GAGGTACTGCATCAATCGAC+GGG 0.588234 6_2:+74732801 None:intergenic
GAGGGCTGCATCATTTGTTG+TGG 0.588765 6_2:+74732874 None:intergenic
AACTGCATTCGCTGAGCCTG+GGG 0.596330 6_2:+74732949 None:intergenic
AATCACTCTCAGGGACCTCA+AGG 0.596816 6_2:-74729403 Msa0928730:CDS
AATGGAGGAGGCTCTGCCAA+TGG 0.596871 6_2:-74729226 Msa0928730:CDS
TTGCATTTGGAGCTTTGGTG+TGG 0.597799 6_2:+74729879 None:intergenic
TGCTGTAGTGAGGGTAGATG+GGG 0.597895 6_2:+74729493 None:intergenic
AATCTTTCAGTCATTACCCC+AGG 0.598170 6_2:-74732965 Msa0928730:CDS
CGGACGCTTCACACCAGCCG+AGG 0.600439 6_2:+74732855 None:intergenic
GGAACTAAATCTGGAAGAAG+GGG 0.603444 6_2:-74731921 Msa0928730:CDS
TGCAGTGATTGGTTTCCTTG+AGG 0.604080 6_2:+74729388 None:intergenic
AGAGGTACTGCATCAATCGA+CGG 0.605840 6_2:+74732800 None:intergenic
CCTTGCAAAGAAGCTGGTGA+GGG 0.606576 6_2:+74729586 None:intergenic
AAGCGTCCGTATGACGGTGG+TGG 0.607156 6_2:-74732841 Msa0928730:CDS
TGTAAATGACAAGGGTGAGG+CGG 0.610200 6_2:+74733431 None:intergenic
GGACGCTTCACACCAGCCGA+GGG 0.617274 6_2:+74732856 None:intergenic
ACTCTCCTCGTGCAAAGCAA+CGG 0.618878 6_2:-74732453 Msa0928730:CDS
TTCTGAAAGTGGGTCAGATG+GGG 0.619067 6_2:-74730845 Msa0928730:CDS
ACAACAAATGATGCAGCCCT+CGG 0.621479 6_2:-74732872 Msa0928730:CDS
GAACAGGCAGCAAATGGTCA+AGG 0.623367 6_2:-74729841 Msa0928730:CDS
ATTGCCATAGCAGCTTGTGA+TGG 0.623500 6_2:+74729709 None:intergenic
TACCTTGATTCCAATCACCA+AGG 0.624295 6_2:-74733795 Msa0928730:five_prime_UTR
TCACCTCACAACAGTAGTGG+TGG 0.625883 6_2:-74729526 Msa0928730:CDS
AATCACAATATGGGCAATCG+TGG 0.626493 6_2:-74729745 Msa0928730:CDS
ATTACCAGAATCTTCTGATG+AGG 0.627608 6_2:-74729681 Msa0928730:CDS
GTACAACAACAGTCTCATAG+TGG 0.628238 6_2:-74729313 Msa0928730:CDS
CTCCTCGTGCAAAGCAACGG+TGG 0.631105 6_2:-74732450 Msa0928730:CDS
TCTAACATCATCAACCCAGA+AGG 0.631328 6_2:+74731687 None:intergenic
CAGAATCAACAGAAGCTGCA+GGG 0.632025 6_2:-74733312 Msa0928730:CDS
AAGATTTGTTGCTGAGCCGG+GGG 0.632626 6_2:+74732982 None:intergenic
AGAAAGAGGAGATACAGTCA+GGG 0.633773 6_2:-74733885 Msa0928730:five_prime_UTR
CAAACTCCAACCACAAATGG+AGG 0.635025 6_2:-74729241 Msa0928730:CDS
AGGCTATGTTTCAGCAACAG+AGG 0.635240 6_2:-74733035 Msa0928730:CDS
CCTCAACAAAATCACTCTCA+GGG 0.635858 6_2:-74729412 Msa0928730:CDS
ACTCCAACCACAAATGGAGG+AGG 0.636114 6_2:-74729238 Msa0928730:CDS
TTGTTTGATGTAAATGACAA+GGG 0.642823 6_2:+74733423 None:intergenic
CTTCTCGATGAAGTGAGCCA+GGG 0.649483 6_2:+74729638 None:intergenic
CTGACAAGTTGAGTCAGTCA+TGG 0.652838 6_2:+74728974 None:intergenic
TGAAACATAGCCTGTAACTG+TGG 0.653059 6_2:+74733045 None:intergenic
AATGAGCGCTGTTGAAGGTG+TGG 0.653128 6_2:+74729451 None:intergenic
ATAGTGGACCCAATGTAAGT+GGG 0.659740 6_2:-74729297 Msa0928730:CDS
TGATGTAAATGACAAGGGTG+AGG 0.659830 6_2:+74733428 None:intergenic
AATTCACCTCACAACAGTAG+TGG 0.664907 6_2:-74729529 Msa0928730:CDS
AGAATTCTGCTGTACTACAG+AGG 0.673615 6_2:+74733365 None:intergenic
GAAGGAAATCTTACTTCACG+CGG 0.674498 6_2:+74731705 None:intergenic
GCAACAATGGATTCAACCAG+AGG 0.677444 6_2:-74729117 Msa0928730:CDS
ATCTACCCTCACTACAGCAG+CGG 0.677886 6_2:-74729489 Msa0928730:CDS
ATTGTTTGATGTAAATGACA+AGG 0.683725 6_2:+74733422 None:intergenic
ACTATATTATCTCTGTACAG+TGG 0.684756 6_2:-74728917 Msa0928730:three_prime_UTR
TTAGCATTATATAGTAACGT+TGG 0.685696 6_2:-74732424 Msa0928730:CDS
AAACTGACCGTAGTTGCCTG+GGG 0.689698 6_2:+74732379 None:intergenic
GATATGTCAAATAACAATGG+GGG 0.690886 6_2:-74729337 Msa0928730:CDS
AGTGATCTGGATGATAACAT+GGG 0.697820 6_2:-74729010 Msa0928730:CDS
AGCGCTGTCTGTGAAGTCAG+GGG 0.701664 6_2:+74729042 None:intergenic
CCTTGATTCCAATCACCAAG+GGG 0.715028 6_2:-74733793 Msa0928730:five_prime_UTR
AATCCACCACTACTGTTGTG+AGG 0.715466 6_2:+74729523 None:intergenic
GTGAAGCGTCCGTATGACGG+TGG 0.716785 6_2:-74732844 Msa0928730:CDS
GGATATGTCAAATAACAATG+GGG 0.717595 6_2:-74729338 Msa0928730:CDS
AATCAACAGAAGCTGCAGGG+TGG 0.731716 6_2:-74733309 Msa0928730:CDS
GCTTGGCAGTGTGACATATG+CGG 0.756800 6_2:-74731942 Msa0928730:CDS
CTTGATTCCAATCACCAAGG+GGG 0.762416 6_2:-74733792 Msa0928730:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAACATATTTTTAACGTTT+TGG - chr6_2:74730085-74730104 Msa0928730:intron 15.0%
!! TCTTTAATTCAAAGATTTAA+TGG - chr6_2:74730360-74730379 Msa0928730:CDS 15.0%
!! ATATAATTAATTGACTATGA+TGG + chr6_2:74731451-74731470 None:intergenic 15.0%
!! ATCATAGTCAATTAATTATA+TGG - chr6_2:74731450-74731469 Msa0928730:CDS 15.0%
!!! TAATTATATGGTTAAACTTT+TGG - chr6_2:74731462-74731481 Msa0928730:CDS 15.0%
!!! AATTATATGGTTAAACTTTT+GGG - chr6_2:74731463-74731482 Msa0928730:CDS 15.0%
!! CAATTATATAGATATCATTA+TGG + chr6_2:74731696-74731715 None:intergenic 15.0%
!! CATAATGATATCTATATAAT+TGG - chr6_2:74731694-74731713 Msa0928730:CDS 15.0%
!!! AAAGTTTTATAACTTTTCTT+TGG + chr6_2:74732037-74732056 None:intergenic 15.0%
!! AAAGAAAAGTTATAAAACTT+TGG - chr6_2:74732036-74732055 Msa0928730:intron 15.0%
!!! AAATTATGGAAAATGAATTT+TGG + chr6_2:74732418-74732437 None:intergenic 15.0%
!! GGATTTGATTAAATAAATTA+TGG + chr6_2:74732432-74732451 None:intergenic 15.0%
!! ATCATTATCTTCATAAATAT+TGG - chr6_2:74732575-74732594 Msa0928730:intron 15.0%
!! AGTAAAACAAGAAAAATATA+AGG + chr6_2:74733796-74733815 None:intergenic 15.0%
!! TCAAACAATATTAGTATTTC+TGG - chr6_2:74729260-74729279 Msa0928730:CDS 20.0%
!! CAAACAATATTAGTATTTCT+GGG - chr6_2:74729261-74729280 Msa0928730:CDS 20.0%
!! CAAATAAAAAAACTGACATT+TGG + chr6_2:74729911-74729930 None:intergenic 20.0%
!!! GTATGATTCATTTTATTTAG+TGG - chr6_2:74730521-74730540 Msa0928730:intron 20.0%
!! AATCCTATAATTTATGAGTT+TGG + chr6_2:74730609-74730628 None:intergenic 20.0%
!! ACAGTAAATATAGTTAGATA+TGG + chr6_2:74731112-74731131 None:intergenic 20.0%
!!! TAATTTTTACCTTTTCTTAC+AGG - chr6_2:74731757-74731776 Msa0928730:CDS 20.0%
!! CTGTAAAAAACAGTAAAAAA+TGG + chr6_2:74732066-74732085 None:intergenic 20.0%
!!! ATAATGTTTCTTTTGCAAAA+GGG - chr6_2:74732247-74732266 Msa0928730:intron 20.0%
!! AATATGGCAAAGAATAATTT+GGG - chr6_2:74733394-74733413 Msa0928730:CDS 20.0%
!!! TTTTCTTGTTTTACTTTTTG+TGG - chr6_2:74733801-74733820 Msa0928730:five_prime_UTR 20.0%
!! AATTATTTAGACTCAAAAGA+AGG - chr6_2:74733997-74734016 Msa0928730:five_prime_UTR 20.0%
! TTGTTTGATGTAAATGACAA+GGG + chr6_2:74729248-74729267 None:intergenic 25.0%
! ATTGTTTGATGTAAATGACA+AGG + chr6_2:74729249-74729268 None:intergenic 25.0%
!! TACATGATTGCTTTAGTTTA+CGG - chr6_2:74729950-74729969 Msa0928730:intron 25.0%
!! AGCAACAACTTTTTATGATT+TGG - chr6_2:74729973-74729992 Msa0928730:intron 25.0%
!! GCAACAACTTTTTATGATTT+GGG - chr6_2:74729974-74729993 Msa0928730:intron 25.0%
!! CAACAACTTTTTATGATTTG+GGG - chr6_2:74729975-74729994 Msa0928730:intron 25.0%
!! CTTCTTTTAACATCTAGATT+AGG - chr6_2:74730111-74730130 Msa0928730:intron 25.0%
! AGGATAATAGTATTGCATAT+TGG - chr6_2:74730170-74730189 Msa0928730:CDS 25.0%
! TTAGCATTATATAGTAACGT+TGG - chr6_2:74730244-74730263 Msa0928730:intron 25.0%
!! ATACAAGTGATAGCTTTTAT+GGG + chr6_2:74730549-74730568 None:intergenic 25.0%
! TATCTATCTCTCTCATAAAT+GGG - chr6_2:74730566-74730585 Msa0928730:intron 25.0%
! AAGCCAAACTCATAAATTAT+AGG - chr6_2:74730603-74730622 Msa0928730:intron 25.0%
! TATAACATTATCGCACAAAA+GGG + chr6_2:74730826-74730845 None:intergenic 25.0%
!! CAAATTATCAAGATTTTCAG+TGG + chr6_2:74731157-74731176 None:intergenic 25.0%
!!! AATTTGCTCAGATATTTTCT+TGG - chr6_2:74731171-74731190 Msa0928730:intron 25.0%
!! ATTTGCTCAGATATTTTCTT+GGG - chr6_2:74731172-74731191 Msa0928730:intron 25.0%
!!! ATGTTTTGAACAATCAAGAA+TGG + chr6_2:74731418-74731437 None:intergenic 25.0%
! ATTAATTGACTATGATGGTA+AGG + chr6_2:74731446-74731465 None:intergenic 25.0%
!!! GAGTTTCTTTTGAAAATCTT+GGG - chr6_2:74731603-74731622 Msa0928730:CDS 25.0%
!!! AGTTTCTTTTGAAAATCTTG+GGG - chr6_2:74731604-74731623 Msa0928730:CDS 25.0%
!!! ATAGTGTAGAGGTATTATTT+TGG - chr6_2:74731721-74731740 Msa0928730:CDS 25.0%
!!! GTATAATGCTTCATGTTTTT+TGG - chr6_2:74731991-74732010 Msa0928730:intron 25.0%
!!! ATGTTTTTTGGAAATTGAGT+TGG - chr6_2:74732003-74732022 Msa0928730:intron 25.0%
!! AATGTGTTTGAAGTTATACA+TGG - chr6_2:74732113-74732132 Msa0928730:intron 25.0%
! TTATACATGGTCAACTAATA+AGG - chr6_2:74732126-74732145 Msa0928730:intron 25.0%
!! GATAATGTTTCTTTTGCAAA+AGG - chr6_2:74732246-74732265 Msa0928730:intron 25.0%
! TTATATTTCATAGTTTCTGC+AGG - chr6_2:74732375-74732394 Msa0928730:intron 25.0%
! TATATTTCATAGTTTCTGCA+GGG - chr6_2:74732376-74732395 Msa0928730:intron 25.0%
! ATCTGTAAAAACATAACAGA+AGG + chr6_2:74732469-74732488 None:intergenic 25.0%
!!! TTATTAAGTGTGTTTTGATC+AGG + chr6_2:74732860-74732879 None:intergenic 25.0%
! ATAAGCAGTAATCACAATAT+GGG - chr6_2:74732914-74732933 Msa0928730:CDS 25.0%
! AGGATATGTCAAATAACAAT+GGG - chr6_2:74733329-74733348 Msa0928730:CDS 25.0%
! GAATATGGCAAAGAATAATT+TGG - chr6_2:74733393-74733412 Msa0928730:CDS 25.0%
!!! CAAAGAATAATTTGGGTTTT+GGG - chr6_2:74733401-74733420 Msa0928730:CDS 25.0%
!!! AAAGAATAATTTGGGTTTTG+GGG - chr6_2:74733402-74733421 Msa0928730:CDS 25.0%
!!! TGCTTTAGAGATTTTATTTG+AGG - chr6_2:74733867-74733886 Msa0928730:five_prime_UTR 25.0%
!!! GCTTTAGAGATTTTATTTGA+GGG - chr6_2:74733868-74733887 Msa0928730:five_prime_UTR 25.0%
TTTGGAAATCTTAGAGAAAG+AGG - chr6_2:74728769-74728788 Msa0928730:three_prime_UTR 30.0%
CTCAATTTGTCTATTGTTTG+AGG - chr6_2:74728813-74728832 Msa0928730:three_prime_UTR 30.0%
! TTTTAAACACTAGTTAAGCC+TGG - chr6_2:74728839-74728858 Msa0928730:three_prime_UTR 30.0%
!!! AGTTCTGGAATTTTCTTTCA+AGG - chr6_2:74728954-74728973 Msa0928730:three_prime_UTR 30.0%
!!! TTACGATTTTGGAATTGTGT+GGG + chr6_2:74729602-74729621 None:intergenic 30.0%
!!! ATTACGATTTTGGAATTGTG+TGG + chr6_2:74729603-74729622 None:intergenic 30.0%
! TTTTGTTGATCTGTTTTCTC+AGG - chr6_2:74730150-74730169 Msa0928730:CDS 30.0%
TGCATATTGGAGAAAATTTG+TGG - chr6_2:74730183-74730202 Msa0928730:CDS 30.0%
TGTTATCATCATGTAACTGT+AGG - chr6_2:74730392-74730411 Msa0928730:CDS 30.0%
ACAAATGGACAATAACTAGA+TGG + chr6_2:74730473-74730492 None:intergenic 30.0%
! GATACAAGTGATAGCTTTTA+TGG + chr6_2:74730550-74730569 None:intergenic 30.0%
GTATCTATCTCTCTCATAAA+TGG - chr6_2:74730565-74730584 Msa0928730:intron 30.0%
ATCTATCTCTCTCATAAATG+GGG - chr6_2:74730567-74730586 Msa0928730:intron 30.0%
TCTCATAAATGGGGAATAAA+TGG - chr6_2:74730576-74730595 Msa0928730:intron 30.0%
! GAAGTACCATGACAATAAAA+GGG + chr6_2:74730655-74730674 None:intergenic 30.0%
!! AGAAGTACCATGACAATAAA+AGG + chr6_2:74730656-74730675 None:intergenic 30.0%
TGCTGAAGAAACAAATATCA+AGG + chr6_2:74730705-74730724 None:intergenic 30.0%
GTATAACATTATCGCACAAA+AGG + chr6_2:74730827-74730846 None:intergenic 30.0%
TACTAATGATATCTGCATTC+TGG - chr6_2:74730844-74730863 Msa0928730:CDS 30.0%
AATTTGACTACGTTAAGTCT+GGG + chr6_2:74730903-74730922 None:intergenic 30.0%
AAATTTGACTACGTTAAGTC+TGG + chr6_2:74730904-74730923 None:intergenic 30.0%
AGACTTAACGTAGTCAAATT+TGG - chr6_2:74730903-74730922 Msa0928730:intron 30.0%
!!! GATCGATGAACTTTTGTTTT+TGG - chr6_2:74730935-74730954 Msa0928730:intron 30.0%
CAATTCTCAAGTATCTACAA+CGG - chr6_2:74731493-74731512 Msa0928730:intron 30.0%
!! AAGTTCTATCCATTTTAACC+TGG - chr6_2:74731541-74731560 Msa0928730:intron 30.0%
AAGAAACTCCATCATTTAGA+GGG + chr6_2:74731592-74731611 None:intergenic 30.0%
AAAGAAACTCCATCATTTAG+AGG + chr6_2:74731593-74731612 None:intergenic 30.0%
!! GGAGTTTCTTTTGAAAATCT+TGG - chr6_2:74731602-74731621 Msa0928730:CDS 30.0%
TAGATATCATTATGGAGTCA+GGG + chr6_2:74731688-74731707 None:intergenic 30.0%
ATAGATATCATTATGGAGTC+AGG + chr6_2:74731689-74731708 None:intergenic 30.0%
! TAATTGGAATGATAGTGTAG+AGG - chr6_2:74731710-74731729 Msa0928730:CDS 30.0%
!!! AGAGGTATTATTTTGGAATG+TGG - chr6_2:74731728-74731747 Msa0928730:CDS 30.0%
! AGAGTACAATTTCTGAAAGT+GGG - chr6_2:74731813-74731832 Msa0928730:intron 30.0%
! ACTCACTGATTGACATATTT+AGG - chr6_2:74731901-74731920 Msa0928730:intron 30.0%
ATGGTCAACTAATAAGGATA+GGG - chr6_2:74732132-74732151 Msa0928730:intron 30.0%
!!! ATAATTTGTTTTCTTGAGCC+AGG - chr6_2:74732180-74732199 Msa0928730:intron 30.0%
AGTATTAATCTCTACAAACC+TGG + chr6_2:74732201-74732220 None:intergenic 30.0%
CTACAATCACTAAATGACTT+GGG - chr6_2:74732308-74732327 Msa0928730:intron 30.0%
!! AAGATTTGTTAGAACTTTGC+AGG - chr6_2:74732340-74732359 Msa0928730:intron 30.0%
!!! ATATGTTTTGATCACAACGT+TGG - chr6_2:74732526-74732545 Msa0928730:intron 30.0%
ATTAATAAACACAGGAACAG+AGG + chr6_2:74732719-74732738 None:intergenic 30.0%
GTAGTAGGATTAATAAACAC+AGG + chr6_2:74732727-74732746 None:intergenic 30.0%
!! TAATTTTTCAAACTCTCTGC+AGG + chr6_2:74732755-74732774 None:intergenic 30.0%
AAACACACTTAATAAGCTGA+TGG - chr6_2:74732865-74732884 Msa0928730:CDS 30.0%
CATAAGCAGTAATCACAATA+TGG - chr6_2:74732913-74732932 Msa0928730:CDS 30.0%
CAGGATATGTCAAATAACAA+TGG - chr6_2:74733328-74733347 Msa0928730:CDS 30.0%
GGATATGTCAAATAACAATG+GGG - chr6_2:74733330-74733349 Msa0928730:CDS 30.0%
GATATGTCAAATAACAATGG+GGG - chr6_2:74733331-74733350 Msa0928730:CDS 30.0%
!! GCAAAGAATAATTTGGGTTT+TGG - chr6_2:74733400-74733419 Msa0928730:CDS 30.0%
!! AAGAATAATTTGGGTTTTGG+GGG - chr6_2:74733403-74733422 Msa0928730:CDS 30.0%
ACTATATTATCTCTGTACAG+TGG - chr6_2:74733751-74733770 Msa0928730:CDS 30.0%
!! TTTTGTGGTCATTTTCTTGA+TGG - chr6_2:74733816-74733835 Msa0928730:five_prime_UTR 30.0%
!! AAAATCTCTAAAGCACCTAT+TGG + chr6_2:74733862-74733881 None:intergenic 30.0%
! TTGTTGTACATGTGTTTTGC+AGG - chr6_2:74728733-74728752 Msa0928730:three_prime_UTR 35.0%
! TGGAATTTTCTTTCAAGGAG+AGG - chr6_2:74728959-74728978 Msa0928730:three_prime_UTR 35.0%
! GGAATTTTCTTTCAAGGAGA+GGG - chr6_2:74728960-74728979 Msa0928730:three_prime_UTR 35.0%
! GAATTTTCTTTCAAGGAGAG+GGG - chr6_2:74728961-74728980 Msa0928730:three_prime_UTR 35.0%
AACTCATCTAACACTATACC+TGG - chr6_2:74729029-74729048 Msa0928730:CDS 35.0%
TTATTCATATCCCCAGAAAC+CGG + chr6_2:74729077-74729096 None:intergenic 35.0%
! GTTTCTGGGGATATGAATAA+CGG - chr6_2:74729077-74729096 Msa0928730:CDS 35.0%
! TAACGGAATTTTGAACAGTG+TGG - chr6_2:74729094-74729113 Msa0928730:CDS 35.0%
! CAAAGAAGTGCAAGCATTAA+TGG - chr6_2:74729194-74729213 Msa0928730:CDS 35.0%
AGCAGGTGGGATATATTATT+TGG + chr6_2:74729500-74729519 None:intergenic 35.0%
AGATGATATAATGCAACAGC+AGG - chr6_2:74729547-74729566 Msa0928730:CDS 35.0%
!!! TACGATTTTGGAATTGTGTG+GGG + chr6_2:74729601-74729620 None:intergenic 35.0%
!! GTAACTGTGGATTACGATTT+TGG + chr6_2:74729613-74729632 None:intergenic 35.0%
AAATCGTAATCCACAGTTAC+AGG - chr6_2:74729613-74729632 Msa0928730:CDS 35.0%
! TATTTGCTGCATGTGAAAAC+CGG - chr6_2:74729925-74729944 Msa0928730:intron 35.0%
ACTAAAGCAATCATGTAGAC+CGG + chr6_2:74729947-74729966 None:intergenic 35.0%
CATCTAGATTAGGTACAACA+CGG - chr6_2:74730121-74730140 Msa0928730:intron 35.0%
! GTTTTTGCACTTCCATGAAT+AGG - chr6_2:74730308-74730327 Msa0928730:intron 35.0%
AATTTACAGCTCTTGTCTAG+AGG + chr6_2:74730433-74730452 None:intergenic 35.0%
TGGTACTTCTGATTCTTTGA+AGG - chr6_2:74730666-74730685 Msa0928730:intron 35.0%
GGTACTTCTGATTCTTTGAA+GGG - chr6_2:74730667-74730686 Msa0928730:intron 35.0%
! ATTTGTTTCTTCAGCATGCT+TGG - chr6_2:74730709-74730728 Msa0928730:intron 35.0%
! ATTCTGGATTTGCTTAACAG+AGG - chr6_2:74730860-74730879 Msa0928730:CDS 35.0%
CTTAACGTAGTCAAATTTGG+TGG - chr6_2:74730906-74730925 Msa0928730:intron 35.0%
GTGAAGTAAGATTTCCTTCT+GGG - chr6_2:74730967-74730986 Msa0928730:intron 35.0%
CGTATTTACTCAAGACCTAA+AGG - chr6_2:74731073-74731092 Msa0928730:intron 35.0%
GGTGAAGATCTATAACCTTT+AGG + chr6_2:74731091-74731110 None:intergenic 35.0%
TTTCTTGGGATTTCTGTGTA+AGG - chr6_2:74731186-74731205 Msa0928730:intron 35.0%
GAATCTTGTAGTGTAGCTAA+AGG + chr6_2:74731380-74731399 None:intergenic 35.0%
GATAGAACTTTCACACCTTT+GGG + chr6_2:74731531-74731550 None:intergenic 35.0%
! TTGGTTCTTCCAGGTTAAAA+TGG + chr6_2:74731553-74731572 None:intergenic 35.0%
ATTGGTTGACCTGTAAGAAA+AGG + chr6_2:74731769-74731788 None:intergenic 35.0%
TTTGAGCAACCTGAACTAAT+TGG + chr6_2:74731787-74731806 None:intergenic 35.0%
CACTTTCAGAAATTGTACTC+TGG + chr6_2:74731814-74731833 None:intergenic 35.0%
! CAGAGTACAATTTCTGAAAG+TGG - chr6_2:74731812-74731831 Msa0928730:intron 35.0%
!! GTAACATGTAAGTTGATGCA+TGG - chr6_2:74731873-74731892 Msa0928730:intron 35.0%
CATGGTCAACTAATAAGGAT+AGG - chr6_2:74732131-74732150 Msa0928730:intron 35.0%
TGGTCAACTAATAAGGATAG+GGG - chr6_2:74732133-74732152 Msa0928730:intron 35.0%
GCTACAATCACTAAATGACT+TGG - chr6_2:74732307-74732326 Msa0928730:intron 35.0%
CAGAAGGCAGAGAAAAAAAA+AGG + chr6_2:74732453-74732472 None:intergenic 35.0%
! TCAGCTGTTTCAAATTACAC+AGG - chr6_2:74732599-74732618 Msa0928730:intron 35.0%
!! ATCTTTTGCATTTGGAGCTT+TGG + chr6_2:74732797-74732816 None:intergenic 35.0%
!!! TAAGTGTGTTTTGATCAGGT+GGG + chr6_2:74732856-74732875 None:intergenic 35.0%
!!! TTAAGTGTGTTTTGATCAGG+TGG + chr6_2:74732857-74732876 None:intergenic 35.0%
CTTATGTGATTGTTTGATCC+AGG + chr6_2:74732899-74732918 None:intergenic 35.0%
CATCAGAAGATTCTGGTAAT+TGG + chr6_2:74732987-74733006 None:intergenic 35.0%
ATTACCAGAATCTTCTGATG+AGG - chr6_2:74732987-74733006 Msa0928730:CDS 35.0%
! TCTGGTTTGAGTTACTGAAA+GGG + chr6_2:74733060-74733079 None:intergenic 35.0%
!! TTCTGGTTTGAGTTACTGAA+AGG + chr6_2:74733061-74733080 None:intergenic 35.0%
TCCATTATTTCCTTGACCAT+TGG + chr6_2:74733461-74733480 None:intergenic 35.0%
!! GAAATAATGGACCTGTTTCA+AGG - chr6_2:74733470-74733489 Msa0928730:CDS 35.0%
AAACTGTTACTCCTTGAAAC+AGG + chr6_2:74733484-74733503 None:intergenic 35.0%
AGTGATCTGGATGATAACAT+GGG - chr6_2:74733658-74733677 Msa0928730:CDS 35.0%
! ATGATAACATGGGTTTTACC+TGG - chr6_2:74733668-74733687 Msa0928730:CDS 35.0%
ACTCAACTTGTCAGTGTAAT+TGG - chr6_2:74733703-74733722 Msa0928730:CDS 35.0%
!!! ATTTGAGGGTTGTTTTTTCC+TGG - chr6_2:74733882-74733901 Msa0928730:five_prime_UTR 35.0%
TACTAGTAGATTACACTTGC+AGG + chr6_2:74733908-74733927 None:intergenic 35.0%
! ACGGAAGAGATATTGTTGTT+TGG - chr6_2:74733947-74733966 Msa0928730:five_prime_UTR 35.0%
! CATGTGTTTTGCAGGTTTGT+CGG - chr6_2:74728741-74728760 Msa0928730:three_prime_UTR 40.0%
AGAAAGAGGAGATACAGTCA+GGG - chr6_2:74728783-74728802 Msa0928730:three_prime_UTR 40.0%
TACCTTGATTCCAATCACCA+AGG - chr6_2:74728873-74728892 Msa0928730:three_prime_UTR 40.0%
ACCTTGATTCCAATCACCAA+GGG - chr6_2:74728874-74728893 Msa0928730:three_prime_UTR 40.0%
GCTCAATCATCATCAAGTTC+TGG - chr6_2:74728939-74728958 Msa0928730:three_prime_UTR 40.0%
TCTAACACTATACCTGGAAC+TGG - chr6_2:74729035-74729054 Msa0928730:CDS 40.0%
AAAGAACTAGCTCCAACACT+TGG + chr6_2:74729131-74729150 None:intergenic 40.0%
TGCTTGCACTTCTTTGCATA+TGG + chr6_2:74729190-74729209 None:intergenic 40.0%
TGATGTAAATGACAAGGGTG+AGG + chr6_2:74729243-74729262 None:intergenic 40.0%
AGAATTCTGCTGTACTACAG+AGG + chr6_2:74729306-74729325 None:intergenic 40.0%
TGAAACATAGCCTGTAACTG+TGG + chr6_2:74729626-74729645 None:intergenic 40.0%
!! TGAAAGATTTGTTGCTGAGC+CGG + chr6_2:74729692-74729711 None:intergenic 40.0%
AATCTTTCAGTCATTACCCC+AGG - chr6_2:74729703-74729722 Msa0928730:CDS 40.0%
TTGCAGCATCATCCTATTCA+TGG + chr6_2:74730323-74730342 None:intergenic 40.0%
TTGTCCATTTGTGAGAGAGA+TGG - chr6_2:74730481-74730500 Msa0928730:intron 40.0%
! TCCTTGCCCTTTTATTGTCA+TGG - chr6_2:74730646-74730665 Msa0928730:intron 40.0%
ACCATGACAATAAAAGGGCA+AGG + chr6_2:74730650-74730669 None:intergenic 40.0%
GACATATGCGGAACTAAATC+TGG - chr6_2:74730738-74730757 Msa0928730:intron 40.0%
CGGAACTAAATCTGGAAGAA+GGG - chr6_2:74730746-74730765 Msa0928730:intron 40.0%
GGAACTAAATCTGGAAGAAG+GGG - chr6_2:74730747-74730766 Msa0928730:intron 40.0%
AAATCTGGAAGAAGGGGATT+TGG - chr6_2:74730753-74730772 Msa0928730:intron 40.0%
! AACGTAGTCAAATTTGGTGG+TGG - chr6_2:74730909-74730928 Msa0928730:intron 40.0%
GAAGGAAATCTTACTTCACG+CGG + chr6_2:74730966-74730985 None:intergenic 40.0%
CGTGAAGTAAGATTTCCTTC+TGG - chr6_2:74730966-74730985 Msa0928730:intron 40.0%
TCTAACATCATCAACCCAGA+AGG + chr6_2:74730984-74731003 None:intergenic 40.0%
TATGATTCCGCATGCTATGT+TGG - chr6_2:74731254-74731273 Msa0928730:intron 40.0%
CTTACATCCAACATAGCATG+CGG + chr6_2:74731264-74731283 None:intergenic 40.0%
CGGTTCTTGAAATTTCCCAA+AGG - chr6_2:74731513-74731532 Msa0928730:intron 40.0%
GGATAGAACTTTCACACCTT+TGG + chr6_2:74731532-74731551 None:intergenic 40.0%
ACAGGTCAACCAATTAGTTC+AGG - chr6_2:74731775-74731794 Msa0928730:CDS 40.0%
! ATTTCTGAAAGTGGGTCAGA+TGG - chr6_2:74731821-74731840 Msa0928730:intron 40.0%
! TTTCTGAAAGTGGGTCAGAT+GGG - chr6_2:74731822-74731841 Msa0928730:intron 40.0%
AGATAGTGAATCTGAGGAAG+AGG + chr6_2:74731931-74731950 None:intergenic 40.0%
CAAGAGAGATAGTGAATCTG+AGG + chr6_2:74731937-74731956 None:intergenic 40.0%
! TCTCCTGCATCTTTTGCATT+TGG + chr6_2:74732805-74732824 None:intergenic 40.0%
AATGCAAAAGATGCAGGAGA+TGG - chr6_2:74732805-74732824 Msa0928730:CDS 40.0%
!!! AAGTGTGTTTTGATCAGGTG+GGG + chr6_2:74732855-74732874 None:intergenic 40.0%
AATCACAATATGGGCAATCG+TGG - chr6_2:74732923-74732942 Msa0928730:CDS 40.0%
TTTGCCTCATCAGAAGATTC+TGG + chr6_2:74732994-74733013 None:intergenic 40.0%
AACTCAATGAATTCAAGCCC+TGG - chr6_2:74733013-74733032 Msa0928730:CDS 40.0%
! CTGGTTTGAGTTACTGAAAG+GGG + chr6_2:74733059-74733078 None:intergenic 40.0%
AATTCACCTCACAACAGTAG+TGG - chr6_2:74733139-74733158 Msa0928730:CDS 40.0%
ACCTCAACAAAATCACTCTC+AGG - chr6_2:74733255-74733274 Msa0928730:CDS 40.0%
CCTCAACAAAATCACTCTCA+GGG - chr6_2:74733256-74733275 Msa0928730:CDS 40.0%
GTACAACAACAGTCTCATAG+TGG - chr6_2:74733355-74733374 Msa0928730:CDS 40.0%
!! ATAGTGGACCCAATGTAAGT+GGG - chr6_2:74733371-74733390 Msa0928730:CDS 40.0%
ACCCAATGTAAGTGGGAATA+TGG - chr6_2:74733378-74733397 Msa0928730:CDS 40.0%
GCCATATTCCCACTTACATT+GGG + chr6_2:74733382-74733401 None:intergenic 40.0%
TGCCATATTCCCACTTACAT+TGG + chr6_2:74733383-74733402 None:intergenic 40.0%
GCCAATGGTCAAGGAAATAA+TGG - chr6_2:74733457-74733476 Msa0928730:CDS 40.0%
CGCTTTCTTTAACAGTGATC+TGG - chr6_2:74733645-74733664 Msa0928730:CDS 40.0%
CAGTGATCTGGATGATAACA+TGG - chr6_2:74733657-74733676 Msa0928730:CDS 40.0%
GTCATGACTCTTACTCCAAT+AGG - chr6_2:74733844-74733863 Msa0928730:five_prime_UTR 40.0%
! CTTTTAATCCGTGCAACACA+CGG - chr6_2:74733928-74733947 Msa0928730:five_prime_UTR 40.0%
GAGAAAGAGGAGATACAGTC+AGG - chr6_2:74728782-74728801 Msa0928730:three_prime_UTR 45.0%
CCTTGATTCCAATCACCAAG+GGG - chr6_2:74728875-74728894 Msa0928730:three_prime_UTR 45.0%
CTTGATTCCAATCACCAAGG+GGG - chr6_2:74728876-74728895 Msa0928730:three_prime_UTR 45.0%
GATGCAAATTCTGCACTCTC+TGG - chr6_2:74729158-74729177 Msa0928730:CDS 45.0%
TGTAAATGACAAGGGTGAGG+CGG + chr6_2:74729240-74729259 None:intergenic 45.0%
!! TATTTCTGGGTCACCTGCAA+TGG - chr6_2:74729274-74729293 Msa0928730:CDS 45.0%
CAGAATCAACAGAAGCTGCA+GGG - chr6_2:74729356-74729375 Msa0928730:CDS 45.0%
ACAAGTGCCTGGATCTTTCA+CGG - chr6_2:74729442-74729461 Msa0928730:CDS 45.0%
GGATCTTGAGTGAAAGATCC+AGG + chr6_2:74729479-74729498 None:intergenic 45.0%
!!! CCTACGTTTTTTCAGCAGGT+GGG + chr6_2:74729513-74729532 None:intergenic 45.0%
AGGCTATGTTTCAGCAACAG+AGG - chr6_2:74729633-74729652 Msa0928730:CDS 45.0%
!! AAAGATTTGTTGCTGAGCCG+GGG + chr6_2:74729690-74729709 None:intergenic 45.0%
!! GAAAGATTTGTTGCTGAGCC+GGG + chr6_2:74729691-74729710 None:intergenic 45.0%
AGCAACAACAGCAAATGCAG+AGG - chr6_2:74729762-74729781 Msa0928730:CDS 45.0%
ACAACAAATGATGCAGCCCT+CGG - chr6_2:74729796-74729815 Msa0928730:CDS 45.0%
!! AGAGGTACTGCATCAATCGA+CGG + chr6_2:74729871-74729890 None:intergenic 45.0%
! GTCGCTGTCTTTGATGATAG+AGG + chr6_2:74729889-74729908 None:intergenic 45.0%
! TGTTTTACCCCAGGCAACTA+CGG - chr6_2:74730282-74730301 Msa0928730:intron 45.0%
AAAACTGACCGTAGTTGCCT+GGG + chr6_2:74730293-74730312 None:intergenic 45.0%
AAAAACTGACCGTAGTTGCC+TGG + chr6_2:74730294-74730313 None:intergenic 45.0%
GTGTCCATCTCTCTCACAAA+TGG + chr6_2:74730488-74730507 None:intergenic 45.0%
GCGGAACTAAATCTGGAAGA+AGG - chr6_2:74730745-74730764 Msa0928730:intron 45.0%
! TGGAAGAAGGGGATTTGGTA+TGG - chr6_2:74730758-74730777 Msa0928730:intron 45.0%
CACACACTCTTGAACTGCTT+TGG + chr6_2:74731012-74731031 None:intergenic 45.0%
TTCGAGGAAGAAGTTCTTCG+TGG + chr6_2:74731214-74731233 None:intergenic 45.0%
TGTGGTGCAACTAACTTTCG+AGG + chr6_2:74731230-74731249 None:intergenic 45.0%
TCGAAAGTTAGTTGCACCAC+AGG - chr6_2:74731229-74731248 Msa0928730:intron 45.0%
CATGCGGAATCATATACCTG+TGG + chr6_2:74731248-74731267 None:intergenic 45.0%
GCACAAAGACACACAGAATG+TGG + chr6_2:74731332-74731351 None:intergenic 45.0%
!! CTGGTACATTTGGTTCTTCC+AGG + chr6_2:74731562-74731581 None:intergenic 45.0%
! TCATTTAGAGGGCACGAATC+TGG + chr6_2:74731581-74731600 None:intergenic 45.0%
GATTCGTGCCCTCTAAATGA+TGG - chr6_2:74731581-74731600 Msa0928730:intron 45.0%
AAGACGACAGGTTTACTCAG+TGG + chr6_2:74731630-74731649 None:intergenic 45.0%
! TTCTGAAAGTGGGTCAGATG+GGG - chr6_2:74731823-74731842 Msa0928730:intron 45.0%
AACACAGGAACAGAGGCTAA+TGG + chr6_2:74732712-74732731 None:intergenic 45.0%
TCTCTGCAGGCAAATGTAGT+AGG + chr6_2:74732742-74732761 None:intergenic 45.0%
! TTGCATTTGGAGCTTTGGTG+TGG + chr6_2:74732792-74732811 None:intergenic 45.0%
GCTCCAAATGCAAAAGATGC+AGG - chr6_2:74732799-74732818 Msa0928730:CDS 45.0%
AAAGATGCAGGAGATGGAAC+AGG - chr6_2:74732811-74732830 Msa0928730:CDS 45.0%
!!! AGTGTGTTTTGATCAGGTGG+GGG + chr6_2:74732854-74732873 None:intergenic 45.0%
! AAGCTGATGGCATTGAATCC+TGG - chr6_2:74732878-74732897 Msa0928730:CDS 45.0%
ATTGCCATAGCAGCTTGTGA+TGG + chr6_2:74732962-74732981 None:intergenic 45.0%
GTGAATTCTGCATAGAGCCT+GGG + chr6_2:74733126-74733145 None:intergenic 45.0%
AATCCACCACTACTGTTGTG+AGG + chr6_2:74733148-74733167 None:intergenic 45.0%
! CACTTAATGAGCGCTGTTGA+AGG + chr6_2:74733225-74733244 None:intergenic 45.0%
! CCCTGAGAGTGATTTTGTTG+AGG + chr6_2:74733259-74733278 None:intergenic 45.0%
!! TGCAGTGATTGGTTTCCTTG+AGG + chr6_2:74733283-74733302 None:intergenic 45.0%
TCATCTGCTGTTGCAGTGAT+TGG + chr6_2:74733294-74733313 None:intergenic 45.0%
ACATATCCTGCAGTAGTTGC+TGG + chr6_2:74733318-74733337 None:intergenic 45.0%
!! CATAGTGGACCCAATGTAAG+TGG - chr6_2:74733370-74733389 Msa0928730:CDS 45.0%
CTCCATTTGTGGTTGGAGTT+TGG + chr6_2:74733429-74733448 None:intergenic 45.0%
CAAACTCCAACCACAAATGG+AGG - chr6_2:74733427-74733446 Msa0928730:CDS 45.0%
! GCAACAATGGATTCAACCAG+AGG - chr6_2:74733551-74733570 Msa0928730:CDS 45.0%
ATCGGAAGCAACGTCTTGTA+AGG + chr6_2:74733602-74733621 None:intergenic 45.0%
TGTGAAGTCAGGGGCAAAAT+CGG + chr6_2:74733620-74733639 None:intergenic 45.0%
! CTGACAAGTTGAGTCAGTCA+TGG + chr6_2:74733697-74733716 None:intergenic 45.0%
TATCTCTTCCGTGTGTTGCA+CGG + chr6_2:74733939-74733958 None:intergenic 45.0%
GCAGGTTTGTCGGTGAAGTT+TGG - chr6_2:74728751-74728770 Msa0928730:three_prime_UTR 50.0%
CAAGGTAGCTATCGTAAGCC+AGG + chr6_2:74728860-74728879 None:intergenic 50.0%
! CCCCTTGGTGATTGGAATCA+AGG + chr6_2:74728878-74728897 None:intergenic 50.0%
AGGTTGGAATGACCAGTTCC+AGG + chr6_2:74729050-74729069 None:intergenic 50.0%
GGAACTGGTCATTCCAACCT+TGG - chr6_2:74729050-74729069 Msa0928730:CDS 50.0%
TGGTCATTCCAACCTTGGTC+CGG - chr6_2:74729055-74729074 Msa0928730:CDS 50.0%
GTAAATGACAAGGGTGAGGC+GGG + chr6_2:74729239-74729258 None:intergenic 50.0%
ACAGAGGAACCATCCATTGC+AGG + chr6_2:74729290-74729309 None:intergenic 50.0%
GCAGAATCAACAGAAGCTGC+AGG - chr6_2:74729355-74729374 Msa0928730:CDS 50.0%
AATCAACAGAAGCTGCAGGG+TGG - chr6_2:74729359-74729378 Msa0928730:CDS 50.0%
! CTTTTGCCTGCTTCTCAAGC+TGG - chr6_2:74729395-74729414 Msa0928730:CDS 50.0%
TGGCTCATCTTCGCACCAAA+CGG - chr6_2:74729415-74729434 Msa0928730:CDS 50.0%
CAAGTGCCTGGATCTTTCAC+GGG - chr6_2:74729443-74729462 Msa0928730:CDS 50.0%
CCCACCTGCTGAAAAAACGT+AGG - chr6_2:74729510-74729529 Msa0928730:CDS 50.0%
!!! GCCTACGTTTTTTCAGCAGG+TGG + chr6_2:74729514-74729533 None:intergenic 50.0%
!!! CCAGCCTACGTTTTTTCAGC+AGG + chr6_2:74729517-74729536 None:intergenic 50.0%
CCTGCTGAAAAAACGTAGGC+TGG - chr6_2:74729514-74729533 Msa0928730:CDS 50.0%
AATCTTTCAGTCGTTGCCCC+CGG - chr6_2:74729670-74729689 Msa0928730:CDS 50.0%
!! AAGATTTGTTGCTGAGCCGG+GGG + chr6_2:74729689-74729708 None:intergenic 50.0%
AAACTGCATTCGCTGAGCCT+GGG + chr6_2:74729723-74729742 None:intergenic 50.0%
! GAGGGCTGCATCATTTGTTG+TGG + chr6_2:74729797-74729816 None:intergenic 50.0%
!! GAGGTACTGCATCAATCGAC+GGG + chr6_2:74729870-74729889 None:intergenic 50.0%
ACTCTCCTCGTGCAAAGCAA+CGG - chr6_2:74730215-74730234 Msa0928730:intron 50.0%
AACGTTGGACACCATTCAGC+TGG - chr6_2:74730259-74730278 Msa0928730:intron 50.0%
GGGGTAAAACACCAGCTGAA+TGG + chr6_2:74730273-74730292 None:intergenic 50.0%
! TTCAGCTGGTGTTTTACCCC+AGG - chr6_2:74730273-74730292 Msa0928730:intron 50.0%
AAACTGACCGTAGTTGCCTG+GGG + chr6_2:74730292-74730311 None:intergenic 50.0%
GCTTGGCAGTGTGACATATG+CGG - chr6_2:74730726-74730745 Msa0928730:intron 50.0%
! CAGCTTCGTGTTGTTCGTGA+GGG - chr6_2:74731038-74731057 Msa0928730:intron 50.0%
GGGCACGAATCTGGTACATT+TGG + chr6_2:74731572-74731591 None:intergenic 50.0%
CAGCGACAAAGAAAGACGAC+AGG + chr6_2:74731642-74731661 None:intergenic 50.0%
! GATCACAACGTTGGAGCACT+TGG - chr6_2:74732535-74732554 Msa0928730:intron 50.0%
GAGATGGAACAGGCAGCAAA+TGG - chr6_2:74732821-74732840 Msa0928730:CDS 50.0%
GAACAGGCAGCAAATGGTCA+AGG - chr6_2:74732827-74732846 Msa0928730:CDS 50.0%
GCAATCGTGGTGCTTTGACT+GGG - chr6_2:74732936-74732955 Msa0928730:CDS 50.0%
CTTCTCGATGAAGTGAGCCA+GGG + chr6_2:74733033-74733052 None:intergenic 50.0%
CTGGCTCACTTCATCGAGAA+GGG - chr6_2:74733032-74733051 Msa0928730:CDS 50.0%
AAGAAGCTGGTGAGGGATTC+TGG + chr6_2:74733078-74733097 None:intergenic 50.0%
CCTTGCAAAGAAGCTGGTGA+GGG + chr6_2:74733085-74733104 None:intergenic 50.0%
ACCTTGCAAAGAAGCTGGTG+AGG + chr6_2:74733086-74733105 None:intergenic 50.0%
! CAGCTTCTTTGCAAGGTGCT+GGG - chr6_2:74733089-74733108 Msa0928730:CDS 50.0%
!! AGCTTCTTTGCAAGGTGCTG+GGG - chr6_2:74733090-74733109 Msa0928730:CDS 50.0%
GGTGAATTCTGCATAGAGCC+TGG + chr6_2:74733127-74733146 None:intergenic 50.0%
TCACCTCACAACAGTAGTGG+TGG - chr6_2:74733142-74733161 Msa0928730:CDS 50.0%
TGCTGTAGTGAGGGTAGATG+GGG + chr6_2:74733178-74733197 None:intergenic 50.0%
CTGCTGTAGTGAGGGTAGAT+GGG + chr6_2:74733179-74733198 None:intergenic 50.0%
ATCTACCCTCACTACAGCAG+CGG - chr6_2:74733179-74733198 Msa0928730:CDS 50.0%
! AATGAGCGCTGTTGAAGGTG+TGG + chr6_2:74733220-74733239 None:intergenic 50.0%
AATCACTCTCAGGGACCTCA+AGG - chr6_2:74733265-74733284 Msa0928730:CDS 50.0%
GATGATCCAGCAACTACTGC+AGG - chr6_2:74733309-74733328 Msa0928730:CDS 50.0%
GGCCAAACTCCAACCACAAA+TGG - chr6_2:74733424-74733443 Msa0928730:CDS 50.0%
ACTCCAACCACAAATGGAGG+AGG - chr6_2:74733430-74733449 Msa0928730:CDS 50.0%
GCGACATATCAGATGTCCTC+TGG + chr6_2:74733570-74733589 None:intergenic 50.0%
! AAGCGCTGTCTGTGAAGTCA+GGG + chr6_2:74733630-74733649 None:intergenic 50.0%
!! AAAGCGCTGTCTGTGAAGTC+AGG + chr6_2:74733631-74733650 None:intergenic 50.0%
TTGAGTCAGTCATGGCTTCC+AGG + chr6_2:74733689-74733708 None:intergenic 50.0%
GTAGATTACACTTGCAGGCC+AGG + chr6_2:74733903-74733922 None:intergenic 50.0%
! AGGTATGCCCCCTTGGTGAT+TGG + chr6_2:74728886-74728905 None:intergenic 55.0%
TACCTCCCATGGCACCTTCT+CGG - chr6_2:74728901-74728920 Msa0928730:three_prime_UTR 55.0%
TCCAACCTTGGTCCGGTTTC+TGG - chr6_2:74729062-74729081 Msa0928730:CDS 55.0%
CCAACCTTGGTCCGGTTTCT+GGG - chr6_2:74729063-74729082 Msa0928730:CDS 55.0%
CAACCTTGGTCCGGTTTCTG+GGG - chr6_2:74729064-74729083 Msa0928730:CDS 55.0%
TATCCCCAGAAACCGGACCA+AGG + chr6_2:74729070-74729089 None:intergenic 55.0%
GCAAACTCAGCGCCAAGTGT+TGG - chr6_2:74729116-74729135 Msa0928730:CDS 55.0%
TCTGGGTCACCTGCAATGGA+TGG - chr6_2:74729278-74729297 Msa0928730:CDS 55.0%
GATGAGCCAGCTTGAGAAGC+AGG + chr6_2:74729404-74729423 None:intergenic 55.0%
GGCTCATCTTCGCACCAAAC+GGG - chr6_2:74729416-74729435 Msa0928730:CDS 55.0%
TGTGCACCCGTGAAAGATCC+AGG + chr6_2:74729452-74729471 None:intergenic 55.0%
AACTGCATTCGCTGAGCCTG+GGG + chr6_2:74729722-74729741 None:intergenic 55.0%
GAAACTGCATTCGCTGAGCC+TGG + chr6_2:74729724-74729743 None:intergenic 55.0%
! GGTGTGAAGCGTCCGTATGA+CGG - chr6_2:74729821-74729840 Msa0928730:CDS 55.0%
CCAACACCACCACCGTCATA+CGG + chr6_2:74729836-74729855 None:intergenic 55.0%
! TATGACGGTGGTGGTGTTGG+AGG - chr6_2:74729836-74729855 Msa0928730:CDS 55.0%
! GCAGCTTCGTGTTGTTCGTG+AGG - chr6_2:74731037-74731056 Msa0928730:intron 55.0%
TGCAAAAGGGTCCTGACTGC+TGG - chr6_2:74732260-74732279 Msa0928730:intron 55.0%
GCAAAAGGGTCCTGACTGCT+GGG - chr6_2:74732261-74732280 Msa0928730:intron 55.0%
GCGTCAGCTTGCGAAGAGTT+TGG - chr6_2:74732283-74732302 Msa0928730:intron 55.0%
GGCAATCGTGGTGCTTTGAC+TGG - chr6_2:74732935-74732954 Msa0928730:CDS 55.0%
TGGGCCATCACAAGCTGCTA+TGG - chr6_2:74732955-74732974 Msa0928730:CDS 55.0%
CCTTCTCGATGAAGTGAGCC+AGG + chr6_2:74733034-74733053 None:intergenic 55.0%
CCTGGCTCACTTCATCGAGA+AGG - chr6_2:74733031-74733050 Msa0928730:CDS 55.0%
CCCTCACCAGCTTCTTTGCA+AGG - chr6_2:74733082-74733101 Msa0928730:CDS 55.0%
CCAGCACCTTGCAAAGAAGC+TGG + chr6_2:74733091-74733110 None:intergenic 55.0%
CCAGCTTCTTTGCAAGGTGC+TGG - chr6_2:74733088-74733107 Msa0928730:CDS 55.0%
GCTGCTGTAGTGAGGGTAGA+TGG + chr6_2:74733180-74733199 None:intergenic 55.0%
GAGCCTCCTCCATTTGTGGT+TGG + chr6_2:74733436-74733455 None:intergenic 55.0%
AATGGAGGAGGCTCTGCCAA+TGG - chr6_2:74733442-74733461 Msa0928730:CDS 55.0%
AGTGACTCTTCTGCAGCAGC+TGG - chr6_2:74733520-74733539 Msa0928730:CDS 55.0%
AGCGCTGTCTGTGAAGTCAG+GGG + chr6_2:74733629-74733648 None:intergenic 55.0%
ACCTCCCATGGCACCTTCTC+GGG - chr6_2:74728902-74728921 Msa0928730:three_prime_UTR 60.0%
AAACCTCCTGCCACCCGAGA+AGG + chr6_2:74728918-74728937 None:intergenic 60.0%
CCCAGAAACCGGACCAAGGT+TGG + chr6_2:74729066-74729085 None:intergenic 60.0%
CAGGCACTTGTGCACCCGTT+TGG + chr6_2:74729433-74729452 None:intergenic 60.0%
CAAACGGGTGCACAAGTGCC+TGG - chr6_2:74729431-74729450 Msa0928730:CDS 60.0%
TTCACGGGTGCACAAGTGCC+TGG - chr6_2:74729458-74729477 Msa0928730:CDS 60.0%
CAAATGATGCAGCCCTCGGC+TGG - chr6_2:74729800-74729819 Msa0928730:CDS 60.0%
! GTGAAGCGTCCGTATGACGG+TGG - chr6_2:74729824-74729843 Msa0928730:CDS 60.0%
AAGCGTCCGTATGACGGTGG+TGG - chr6_2:74729827-74729846 Msa0928730:CDS 60.0%
! CCGTATGACGGTGGTGGTGT+TGG - chr6_2:74729833-74729852 Msa0928730:CDS 60.0%
CTCCTCGTGCAAAGCAACGG+TGG - chr6_2:74730218-74730237 Msa0928730:intron 60.0%
! CACCACCGTTGCTTTGCACG+AGG + chr6_2:74730223-74730242 None:intergenic 60.0%
GCTGGGGCTGCTATAATCCC+AGG - chr6_2:74733106-74733125 Msa0928730:CDS 60.0%
TGCTGCCGCTGCTGTAGTGA+GGG + chr6_2:74733187-74733206 None:intergenic 60.0%
GGCAGAGCCTCCTCCATTTG+TGG + chr6_2:74733440-74733459 None:intergenic 60.0%
GGAGGCTCTGCCAATGGTCA+AGG - chr6_2:74733448-74733467 Msa0928730:CDS 60.0%
GACTCTTCTGCAGCAGCTGG+TGG - chr6_2:74733523-74733542 Msa0928730:CDS 60.0%
TCTTCTGCAGCAGCTGGTGG+AGG - chr6_2:74733526-74733545 Msa0928730:CDS 60.0%
! CCATGGGAGGTATGCCCCCT+TGG + chr6_2:74728893-74728912 None:intergenic 65.0%
! CCAAGGGGGCATACCTCCCA+TGG - chr6_2:74728890-74728909 Msa0928730:three_prime_UTR 65.0%
!! ACCCGAGAAGGTGCCATGGG+AGG + chr6_2:74728906-74728925 None:intergenic 65.0%
TCCCATGGCACCTTCTCGGG+TGG - chr6_2:74728905-74728924 Msa0928730:three_prime_UTR 65.0%
!! GCCACCCGAGAAGGTGCCAT+GGG + chr6_2:74728909-74728928 None:intergenic 65.0%
!! TGCCACCCGAGAAGGTGCCA+TGG + chr6_2:74728910-74728929 None:intergenic 65.0%
ATGGCACCTTCTCGGGTGGC+AGG - chr6_2:74728909-74728928 Msa0928730:three_prime_UTR 65.0%
GGACGCTTCACACCAGCCGA+GGG + chr6_2:74729815-74729834 None:intergenic 65.0%
CAAGCTGACGCCCAGCAGTC+AGG + chr6_2:74732274-74732293 None:intergenic 65.0%
CTGCTGCCGCTGCTGTAGTG+AGG + chr6_2:74733188-74733207 None:intergenic 65.0%
TCTGCAGCAGCTGGTGGAGG+CGG - chr6_2:74733529-74733548 Msa0928730:CDS 65.0%
GCTGGTGGAGGCGGCAACAA+TGG - chr6_2:74733538-74733557 Msa0928730:CDS 65.0%
GCACCTTCTCGGGTGGCAGG+AGG - chr6_2:74728912-74728931 Msa0928730:three_prime_UTR 70.0%
CGGACGCTTCACACCAGCCG+AGG + chr6_2:74729816-74729835 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 74728668 74734022 74728668 ID=Msa0928730;Name=Msa0928730
chr6_2 mRNA 74728668 74734022 74728668 ID=Msa0928730-mRNA-1;Parent=Msa0928730;Name=Msa0928730-mRNA-1;_AED=0.03;_eAED=0.03;_QI=241|1|1|1|1|1|9|323|892
chr6_2 exon 74728668 74729931 74728668 ID=Msa0928730-mRNA-1:exon:12715;Parent=Msa0928730-mRNA-1
chr6_2 exon 74730134 74730203 74730134 ID=Msa0928730-mRNA-1:exon:12714;Parent=Msa0928730-mRNA-1
chr6_2 exon 74730329 74730422 74730329 ID=Msa0928730-mRNA-1:exon:12713;Parent=Msa0928730-mRNA-1
chr6_2 exon 74730811 74730911 74730811 ID=Msa0928730-mRNA-1:exon:12712;Parent=Msa0928730-mRNA-1
chr6_2 exon 74731440 74731508 74731440 ID=Msa0928730-mRNA-1:exon:12711;Parent=Msa0928730-mRNA-1
chr6_2 exon 74731596 74731810 74731596 ID=Msa0928730-mRNA-1:exon:12710;Parent=Msa0928730-mRNA-1
chr6_2 exon 74731916 74731967 74731916 ID=Msa0928730-mRNA-1:exon:12709;Parent=Msa0928730-mRNA-1
chr6_2 exon 74732387 74732518 74732387 ID=Msa0928730-mRNA-1:exon:12708;Parent=Msa0928730-mRNA-1
chr6_2 exon 74732777 74734022 74732777 ID=Msa0928730-mRNA-1:exon:12707;Parent=Msa0928730-mRNA-1
chr6_2 five_prime_UTR 74733782 74734022 74733782 ID=Msa0928730-mRNA-1:five_prime_utr;Parent=Msa0928730-mRNA-1
chr6_2 CDS 74732777 74733781 74732777 ID=Msa0928730-mRNA-1:cds;Parent=Msa0928730-mRNA-1
chr6_2 CDS 74732387 74732518 74732387 ID=Msa0928730-mRNA-1:cds;Parent=Msa0928730-mRNA-1
chr6_2 CDS 74731916 74731967 74731916 ID=Msa0928730-mRNA-1:cds;Parent=Msa0928730-mRNA-1
chr6_2 CDS 74731596 74731810 74731596 ID=Msa0928730-mRNA-1:cds;Parent=Msa0928730-mRNA-1
chr6_2 CDS 74731440 74731508 74731440 ID=Msa0928730-mRNA-1:cds;Parent=Msa0928730-mRNA-1
chr6_2 CDS 74730811 74730911 74730811 ID=Msa0928730-mRNA-1:cds;Parent=Msa0928730-mRNA-1
chr6_2 CDS 74730329 74730422 74730329 ID=Msa0928730-mRNA-1:cds;Parent=Msa0928730-mRNA-1
chr6_2 CDS 74730134 74730203 74730134 ID=Msa0928730-mRNA-1:cds;Parent=Msa0928730-mRNA-1
chr6_2 CDS 74728991 74729931 74728991 ID=Msa0928730-mRNA-1:cds;Parent=Msa0928730-mRNA-1
chr6_2 three_prime_UTR 74728668 74728990 74728668 ID=Msa0928730-mRNA-1:three_prime_utr;Parent=Msa0928730-mRNA-1
Gene Sequence

>Msa0928730

ATGGCACCTTCTCGGGTGGCAGGAGGTTTAGCTCAATCATCATCAAGTTCTGGAATTTTCTTTCAAGGAGAGGGGCAGTCACATAATTTAGTTAACTCTCACTTGAGCTCGTCATTAGTTAACTCATCTAACACTATACCTGGAACTGGTCATTCCAACCTTGGTCCGGTTTCTGGGGATATGAATAACGGAATTTTGAACAGTGTGGCAAACTCAGCGCCAAGTGTTGGAGCTAGTTCTTTAGTCACAGATGCAAATTCTGCACTCTCTGGTGAGCGCCATATGCAAAGAAGTGCAAGCATTAATGGAGATTCGTATTTAAGATTACCCGCCTCACCCTTGTCATTTACATCAAACAATATTAGTATTTCTGGGTCACCTGCAATGGATGGTTCCTCTGTAGTACAGCAGAATTCTCATCAAGATCAGAATGCTCAACAGTTGCAGCAGAATCAACAGAAGCTGCAGGGTGGTTCAAGTTCTATGCTTTTGCCTGCTTCTCAAGCTGGCTCATCTTCGCACCAAACGGGTGCACAAGTGCCTGGATCTTTCACGGGTGCACAAGTGCCTGGATCTTTCACTCAAGATCCAAATAATATATCCCACCTGCTGAAAAAACGTAGGCTGGATATCAAACAAGATGATATAATGCAACAGCAGGTAATACAGCAGCTTCTTCAGAGACAAGACCCCACACAATTCCAAAATCGTAATCCACAGTTACAGGCTATGTTTCAGCAACAGAGGCTGAAGCAACAACAAATCTTTCAGTCGTTGCCCCCGGCTCAGCAACAAATCTTTCAGTCATTACCCCAGGCTCAGCGAATGCAGTTTCTGCAGCAACAACAGCAGCAGCAACAACAGCAAATGCAGAGGCAGCAAATACCACAACAAATGATGCAGCCCTCGGCTGGTGTGAAGCGTCCGTATGACGGTGGTGGTGTTGGAGGTGTATGTGCCCGTCGATTGATGCAGTACCTCTATCATCAAAGACAGCGACCAAATGATAATAGTATTGCATATTGGAGAAAATTTGTGGCTGAATATTACTCTCCTCGTGCAAAGCAACGGTGGTGCTTAGCATTATATAGTAACGTTGGACACCATTCAGCTGGTGTTTTACCCCAGGCAACTACGCATGCTTGGCAGTGTGACATATGCGGAACTAAATCTGGAAGAAGGGGATTTGAGGCAACTTTTGATATACTACCCAGACTTAACGTAGTCAAATTTGGTGGTGGAGTGATCGATGAACTTTTGTTTTTGGACTTGCCGCGTGAAGTAAGATTTCCTTCTGGGTTGATGATGTTAGAATATACCAAAGCAGTTCAAGAGTGTGTGTATGAGCAGCTTCGTGTTGTTCGTGAGGGTCAACTTCGTATCGTATTTACTCAAGACCTAAAGATATTTTCTTGGGATTTCTGTGTAAGGCGCCACGAAGAACTTCTTCCTCGAAAGTTAGTTGCACCACAGGTCAACCAATTAGTTCAGGTTGCTCAAAAATGCCAGAGTACAATTTCTGAAAGTGGGTCAGATGGGGTCTCTCAGCAAGACTTGCAAACAAACAGTAACATGGTCCTGACTGCTGGGCGTCAGCTTGCGAAGAGTTTGGAGCTACAATCACTAAATGACTTGGGATTTTCGAAAAGATTTGTTAGAACTTTGCAGATTTCTGAAGTTTGCAATAGCATGAAAGATCTAATCGATATATGTTTTGATCACAACGTTGGAGCACTTGAGAGTTTGAAAAATTATTCTCAATATTCAACCACACCAAAGCTCCAAATGCAAAAGATGCAGGAGATGGAACAGGCAGCAAATGGTCAAGGACCCCCACCTGATCAAAACACACTTAATAAGCTGATGGCATTGAATCCTGGATCAAACAATCACATAAGCAGTAATCACAATATGGGCAATCGTGGTGCTTTGACTGGGCCATCACAAGCTGCTATGGCAATGTCCAATTACCAGAATCTTCTGATGAGGCAAAACTCAATGAATTCAAGCCCTGGCTCACTTCATCGAGAAGGGTCCCCTTTCAGTAACTCAAACCAGAATCCCTCACCAGCTTCTTTGCAAGGTGCTGGGGCTGCTATAATCCCAGGCTCTATGCAGAATTCACCTCACAACAGTAGTGGTGGATTCTCAAATCCCCATCTACCCTCACTACAGCAGCGGCAGCAGCAGCAACAACCACACCTTCAACAGCGCTCATTAAGTGCAAATAATTTACCTCAACAAAATCACTCTCAGGGACCTCAAGGAAACCAATCACTGCAACAGCAGATGATCCAGCAACTACTGCAGGATATGTCAAATAACAATGGGGGAGTACAACAACAGTCTCATAGTGGACCCAATGTAAGTGGGAATATGGCAAAGAATAATTTGGGTTTTGGGGGCCAAACTCCAACCACAAATGGAGGAGGCTCTGCCAATGGTCAAGGAAATAATGGACCTGTTTCAAGGAGTAACAGTTTCAAAGCAGCTTCAAACAGTGACTCTTCTGCAGCAGCTGGTGGAGGCGGCAACAATGGATTCAACCAGAGGACATCTGATATGTCGCAGAATCTAGCCTTACAAGACGTTGCTTCCGATTTTGCCCCTGACTTCACAGACAGCGCTTTCTTTAACAGTGATCTGGATGATAACATGGGTTTTACCTGGAAGCCATGA
Protein sequence

>Msa0928730

MAPSRVAGGLAQSSSSSGIFFQGEGQSHNLVNSHLSSSLVNSSNTIPGTGHSNLGPVSGDMNNGILNSVANSAPSVGASSLVTDANSALSGERHMQRSASINGDSYLRLPASPLSFTSNNISISGSPAMDGSSVVQQNSHQDQNAQQLQQNQQKLQGGSSSMLLPASQAGSSSHQTGAQVPGSFTGAQVPGSFTQDPNNISHLLKKRRLDIKQDDIMQQQVIQQLLQRQDPTQFQNRNPQLQAMFQQQRLKQQQIFQSLPPAQQQIFQSLPQAQRMQFLQQQQQQQQQQMQRQQIPQQMMQPSAGVKRPYDGGGVGGVCARRLMQYLYHQRQRPNDNSIAYWRKFVAEYYSPRAKQRWCLALYSNVGHHSAGVLPQATTHAWQCDICGTKSGRRGFEATFDILPRLNVVKFGGGVIDELLFLDLPREVRFPSGLMMLEYTKAVQECVYEQLRVVREGQLRIVFTQDLKIFSWDFCVRRHEELLPRKLVAPQVNQLVQVAQKCQSTISESGSDGVSQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRFVRTLQISEVCNSMKDLIDICFDHNVGALESLKNYSQYSTTPKLQMQKMQEMEQAANGQGPPPDQNTLNKLMALNPGSNNHISSNHNMGNRGALTGPSQAAMAMSNYQNLLMRQNSMNSSPGSLHREGSPFSNSNQNPSPASLQGAGAAIIPGSMQNSPHNSSGGFSNPHLPSLQQRQQQQQPHLQQRSLSANNLPQQNHSQGPQGNQSLQQQMIQQLLQDMSNNNGGVQQQSHSGPNVSGNMAKNNLGFGGQTPTTNGGGSANGQGNNGPVSRSNSFKAASNSDSSAAAGGGGNNGFNQRTSDMSQNLALQDVASDFAPDFTDSAFFNSDLDDNMGFTWKP*