AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0701840

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0701840 MtrunA17_Chr8g0380271 98.037 866 13 3 1 863 1 865 0.0 1712
Msa0701840 MtrunA17_Chr3g0096441 25.973 874 500 30 18 863 23 777 6.31e-32 133
Msa0701840 MtrunA17_Chr8g0343521 40.323 124 61 3 4 127 6 116 9.71e-17 85.5
Msa0701840 MtrunA17_Chr5g0429151 50.685 73 33 1 18 87 10 82 1.43e-16 84.7
Msa0701840 MtrunA17_Chr5g0446841 40.000 100 58 2 18 115 16 115 4.25e-13 73.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0701840 AT1G29350.1 45.783 913 360 40 2 863 3 831 0.0 570
Msa0701840 AT1G29370.1 45.524 916 358 40 2 863 3 831 0.0 570
Msa0701840 AT1G29370.2 43.775 747 301 33 161 863 20 691 8.96e-150 457
Msa0701840 AT4G18150.1 36.071 901 381 40 6 856 3 758 6.42e-110 355
Msa0701840 AT5G46380.1 50.000 96 42 3 15 105 8 102 1.09e-17 88.2
Msa0701840 AT5G46380.2 50.000 96 42 3 15 105 63 157 1.19e-17 88.2
Msa0701840 AT3G13990.1 47.500 80 42 0 5 84 2 81 6.09e-16 83.2
Msa0701840 AT3G13990.2 47.500 80 42 0 5 84 2 81 6.14e-16 83.2
Msa0701840 AT3G07660.1 54.286 70 28 2 18 83 10 79 2.30e-15 81.3

Find 300 sgRNAs with CRISPR-Local

Find 537 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACAAAATGCCACTGTTTC+TGG 0.131454 4_4:+73293653 Msa0701840:CDS
TGAGAATGGTAGAAATTATT+AGG 0.188167 4_4:-73297057 None:intergenic
TTGTCAAGATGCAGGCTTTA+AGG 0.189462 4_4:+73296123 Msa0701840:intron
TGCAGAAATCCCGACTATTA+TGG 0.197232 4_4:+73293849 Msa0701840:intron
TTTGTATAATACTCAGAATT+TGG 0.210938 4_4:-73292741 None:intergenic
AGTCTGAGCTTTGGAAGTTT+TGG 0.226818 4_4:+73293626 Msa0701840:CDS
ACTGCTTAGGTGGTTGGCTT+TGG 0.229453 4_4:-73297140 None:intergenic
CTGCTTAGGTGGTTGGCTTT+GGG 0.240326 4_4:-73297139 None:intergenic
GCAGGCATTGCTTGTGTAAC+AGG 0.247275 4_4:-73294878 None:intergenic
TATGATTGTTATCCTTATAC+TGG 0.256360 4_4:-73296553 None:intergenic
CCAGGCAAAGATTGTTGATT+AGG 0.276204 4_4:-73296176 None:intergenic
ATATTCCTTTCAGCTGAAAA+TGG 0.278424 4_4:+73293473 Msa0701840:intron
GATAATCCAGGAACTGCTTC+TGG 0.289516 4_4:+73292900 Msa0701840:CDS
GGAAGTTCCACCAGCATTCC+TGG 0.294224 4_4:+73296458 Msa0701840:CDS
TACTCCGATCCCCTCGAGTT+AGG 0.296450 4_4:-73290894 None:intergenic
ATACCATCTGGATATGGTTT+TGG 0.299580 4_4:+73296437 Msa0701840:CDS
GTAACAGGGAAGGGTGAGTA+TGG 0.301650 4_4:-73294863 None:intergenic
ACATACCATTATTACTGAAT+TGG 0.309599 4_4:-73291472 None:intergenic
GCTACTGATGTTTCAGCAAT+TGG 0.311438 4_4:+73293731 Msa0701840:CDS
CTCCTCCAAGTTACTTTGTA+AGG 0.312134 4_4:-73293699 None:intergenic
TAATGATGACCAAGAATAAA+AGG 0.321808 4_4:-73297499 None:intergenic
AATGCTGCTGCGATGGCTGC+TGG 0.323633 4_4:-73297017 None:intergenic
CCTGGTGCTGGTGTTGCCAC+TGG 0.327217 4_4:+73296194 Msa0701840:CDS
CCCGTGTTTAAGAAAGAAAA+TGG 0.342626 4_4:+73291768 Msa0701840:CDS
CGTGATAAACTCCCAGTATA+AGG 0.343410 4_4:+73296541 Msa0701840:CDS
CCTAGGGATGCTTCCCTTGC+CGG 0.343729 4_4:+73297114 Msa0701840:CDS
GCAGAAATCCCGACTATTAT+GGG 0.344135 4_4:+73293850 Msa0701840:intron
GACTAAAACACTCTGGAGTA+TGG 0.347028 4_4:-73293607 None:intergenic
TCATCACTCTGTTGAACATT+GGG 0.349769 4_4:-73292672 None:intergenic
AGTAACTTGGAGGAGACTTC+TGG 0.354552 4_4:+73293707 Msa0701840:CDS
GAAAATGGAACGCCTGCTTA+TGG 0.359441 4_4:+73291783 Msa0701840:CDS
TGAACATTGGGTTCAATAGA+AGG 0.361624 4_4:-73292621 None:intergenic
TCGAACCAATTCAGTAATAA+TGG 0.363650 4_4:+73291467 Msa0701840:CDS
GTATGGAGTTGTAGGTGATT+TGG 0.365100 4_4:-73293590 None:intergenic
TGTCAAGATGCAGGCTTTAA+GGG 0.371015 4_4:+73296124 Msa0701840:intron
CCACTGTGGACAGAAGATTT+AGG 0.371116 4_4:-73292522 None:intergenic
AGCAACATGGCTTCTTCAAT+TGG 0.373493 4_4:+73294908 Msa0701840:CDS
TCATCACTCTGTTGAACATT+GGG 0.374072 4_4:-73292633 None:intergenic
CCGAGTCGCGGCGGCGGCGG+TGG 0.378147 4_4:+73291395 Msa0701840:CDS
TCATATCCAGAAGCAGTTCC+TGG 0.381408 4_4:-73292906 None:intergenic
AGGTGGTTGGCTTTGGGAGC+CGG 0.383810 4_4:-73297133 None:intergenic
GTGGCATAGATCTCGTTATC+AGG 0.387328 4_4:-73291028 None:intergenic
TATCCAATGGTTGTACTAGT+AGG 0.392226 4_4:-73296512 None:intergenic
ATGTTAAATGTACCATTGTT+TGG 0.394612 4_4:+73297282 Msa0701840:three_prime_UTR
CGATATGCTGGCCGGGGTGG+CGG 0.394712 4_4:+73291434 Msa0701840:CDS
TTCTTTGCCCAATGCTCTGT+TGG 0.399402 4_4:+73294808 Msa0701840:CDS
ACCGGCGGCGAGTCGGAAAA+TGG 0.402820 4_4:+73290973 Msa0701840:CDS
GGCAATATATCCCACATAAC+TGG 0.405437 4_4:+73293900 Msa0701840:CDS
TAAACACGGGTTTACTCTGC+TGG 0.406086 4_4:-73291755 None:intergenic
GTTGGGACTGCTTAGGTGGT+TGG 0.411643 4_4:-73297146 None:intergenic
TAAAGCCTCTGGTTGTGAAA+TGG 0.415654 4_4:-73293952 None:intergenic
AAAGAGTATTGTTGTAATAC+AGG 0.416464 4_4:-73297410 None:intergenic
GAATGAGGATATGCAACTTC+TGG 0.418587 4_4:-73294062 None:intergenic
ATATGCAACTTCTGGTTGTT+GGG 0.418891 4_4:-73294054 None:intergenic
ATATAACATAGCTATCAAAA+AGG 0.420805 4_4:+73290625 Msa0701840:five_prime_UTR
TGGAGAAGGGAGATAGGTTC+TGG 0.424665 4_4:-73294103 None:intergenic
GGTTCAGACTTTAAAGCCTC+TGG 0.425019 4_4:-73293963 None:intergenic
CAATGCTCTGTTGGCTTCAA+CGG 0.425294 4_4:+73294817 Msa0701840:CDS
ATCATCGTTGTCGGGTATAC+CGG 0.425443 4_4:+73290955 Msa0701840:CDS
GTTGGCTTTGGGAGCCGGCA+AGG 0.425841 4_4:-73297128 None:intergenic
TCCGTGTTCTGTCTCATATA+TGG 0.427991 4_4:+73297474 Msa0701840:three_prime_UTR
GCTGCTATACCATCTGGATA+TGG 0.428437 4_4:+73296431 Msa0701840:CDS
TGTGCATCCGTACTCACAGC+TGG 0.430757 4_4:+73296241 Msa0701840:CDS
GTTGTTGTTGATTCTGTCCC+TGG 0.432205 4_4:-73296972 None:intergenic
TATGCTCGTGATGTTAACTT+AGG 0.433827 4_4:+73297367 Msa0701840:three_prime_UTR
AGACGACTAACAGCTTCGTT+AGG 0.434553 4_4:-73291073 None:intergenic
TGGTCCGAAGAGACCCAATA+TGG 0.434603 4_4:+73297302 Msa0701840:three_prime_UTR
ACTCCGATCCCCTCGAGTTA+GGG 0.435939 4_4:-73290893 None:intergenic
CCACCGCCGCCGCCGCGACT+CGG 0.436380 4_4:-73291395 None:intergenic
ACTCTGGAGTATGGAGTTGT+AGG 0.436906 4_4:-73293598 None:intergenic
CCGGCCATATTGGGTCTCTT+CGG 0.441041 4_4:-73297306 None:intergenic
TATAATACTCAGAATTTGGA+TGG 0.442532 4_4:-73292737 None:intergenic
GAAGCAGATCCAACATCAAC+AGG 0.444671 4_4:-73292852 None:intergenic
TCACCTTCGTTGTCATCAAA+AGG 0.445731 4_4:-73292975 None:intergenic
TATGCTGGCCGGGGTGGCGG+TGG 0.448422 4_4:+73291437 Msa0701840:CDS
CAGTCTGCTGCTATACCATC+TGG 0.448979 4_4:+73296425 Msa0701840:CDS
TGATGGACAATAATGTAAAC+AGG 0.450601 4_4:+73291835 Msa0701840:CDS
GTAAGGATGAGCGGCAAAGT+AGG 0.453242 4_4:+73290914 Msa0701840:exon
CTGGAAGCTGTAATACGTGC+TGG 0.453247 4_4:-73296953 None:intergenic
TGAACATTGGGGTCAATAGA+AGG 0.454561 4_4:-73292660 None:intergenic
GAGAATGGTAGAAATTATTA+GGG 0.455029 4_4:-73297056 None:intergenic
AACAATCCTATGTGGGTTCA+AGG 0.455407 4_4:+73296901 Msa0701840:CDS
ATTATATCTGATGATAATCC+AGG 0.457309 4_4:+73292888 Msa0701840:CDS
AACTCGAGGGGATCGGAGTA+AGG 0.457374 4_4:+73290897 Msa0701840:five_prime_UTR
GGCGGCGGCGGTGGTAGGAC+TGG 0.457724 4_4:+73291404 Msa0701840:CDS
ATCCAATGGTTGTACTAGTA+GGG 0.460599 4_4:-73296511 None:intergenic
CTACTGATGTTTCAGCAATT+GGG 0.460752 4_4:+73293732 Msa0701840:CDS
TTGGCTTTGGGAGCCGGCAA+GGG 0.466160 4_4:-73297127 None:intergenic
AATTGTTGTTGGGACTGCTT+AGG 0.468035 4_4:-73297153 None:intergenic
AACATGGCTTCTTCAATTGG+TGG 0.468306 4_4:+73294911 Msa0701840:CDS
GTCGCGGCGGCGGCGGTGGT+AGG 0.468646 4_4:+73291399 Msa0701840:CDS
CGCCACCCCGGCCAGCATAT+CGG 0.469813 4_4:-73291433 None:intergenic
TTCATCACTCTGTTGAACAT+TGG 0.471449 4_4:-73292634 None:intergenic
TTATACAAATACATCTAACT+TGG 0.471805 4_4:+73292755 Msa0701840:CDS
TTGCTCTTAACCTCATGAAA+AGG 0.472617 4_4:-73291203 None:intergenic
ATACCGAGTCGCGGCGGCGG+CGG 0.475020 4_4:+73291392 Msa0701840:CDS
TCATATGATTTCACTTCAGC+AGG 0.476681 4_4:+73296571 Msa0701840:CDS
CATGCCATCGGCATTTCAGC+AGG 0.476730 4_4:+73296316 Msa0701840:CDS
CAGCACGTATTACAGCTTCC+AGG 0.479728 4_4:+73296954 Msa0701840:CDS
CAACAATCTTTGCCTGGTGC+TGG 0.482125 4_4:+73296182 Msa0701840:CDS
TTCATCACTCTGTTGAACAT+TGG 0.484635 4_4:-73292673 None:intergenic
GTTAGTCGTCTTCTTTCTCA+AGG 0.485543 4_4:+73291085 Msa0701840:CDS
TAAGGATGAGCGGCAAAGTA+GGG 0.485905 4_4:+73290915 Msa0701840:exon
CAAAAGGATGTCGATGAGAC+TGG 0.486306 4_4:-73292959 None:intergenic
GAAGCACCGCTGCCAGAGAT+TGG 0.486453 4_4:-73296364 None:intergenic
TTACACTGGAGAAGGGAGAT+AGG 0.487511 4_4:-73294109 None:intergenic
ACATCAGAATTGTCCTCCTC+TGG 0.487648 4_4:-73293560 None:intergenic
AGATTTAGGCACGGATGCCT+TGG 0.488437 4_4:-73292508 None:intergenic
GTTGAAGCCAACAGAGCATT+GGG 0.490742 4_4:-73294815 None:intergenic
CCTATGTGGGTTCAAGGGCC+TGG 0.491914 4_4:+73296907 Msa0701840:CDS
GAGAAATTCCACTCTGAGAA+TGG 0.494562 4_4:-73297071 None:intergenic
CGTTGAAGCCAACAGAGCAT+TGG 0.495525 4_4:-73294816 None:intergenic
GTAGTGACCGATATGCTGGC+CGG 0.495955 4_4:+73291426 Msa0701840:CDS
GATATGCAACTTCTGGTTGT+TGG 0.498257 4_4:-73294055 None:intergenic
GAGCCCAGGTCAAGTGTCAA+TGG 0.500187 4_4:+73292455 Msa0701840:CDS
TAGCACCTACCACCAATCTC+TGG 0.500268 4_4:+73296352 Msa0701840:CDS
ACATAACTGGTGTGGATGCT+AGG 0.500709 4_4:+73293913 Msa0701840:CDS
TCAGCCATTGACACTTGACC+TGG 0.501383 4_4:-73292459 None:intergenic
TGCTCATCCCCATAATAGTC+GGG 0.501814 4_4:-73293858 None:intergenic
AGGTACATCATCATCGTTGT+CGG 0.502101 4_4:+73290946 Msa0701840:CDS
TCTGCATGGTCGGCGAGCCC+AGG 0.502549 4_4:+73292441 Msa0701840:CDS
TAGCATCCACACCAGTTATG+TGG 0.502709 4_4:-73293911 None:intergenic
GGCACGGATGCCTTGGCCTG+TGG 0.503151 4_4:-73292501 None:intergenic
AATGCCACTGTTTCTGGAGC+CGG 0.504252 4_4:+73293659 Msa0701840:CDS
TAACTTATCATATTAGCAAA+AGG 0.504719 4_4:-73296266 None:intergenic
TAGGCCCTTACAAAGTAACT+TGG 0.504725 4_4:+73293694 Msa0701840:CDS
CCGGCAAGGGAAGCATCCCT+AGG 0.505021 4_4:-73297114 None:intergenic
TAAACAGGCAGCCACCATCT+TGG 0.509603 4_4:+73291850 Msa0701840:CDS
AAGTTGTGATGCGAGGCTGC+TGG 0.511504 4_4:-73292570 None:intergenic
TGAACCCTCTGAAACTGCTC+AGG 0.513104 4_4:+73293980 Msa0701840:CDS
TTCTGTTGCAGTGATTCTGT+TGG 0.513872 4_4:+73292372 Msa0701840:intron
TGTGAGCTTGCTTGTGAATG+AGG 0.515023 4_4:-73294077 None:intergenic
GTGGAGGAGCCTCCATAAGC+AGG 0.516664 4_4:-73291795 None:intergenic
GGTGCAAAATGCTGCTGCGA+TGG 0.517018 4_4:-73297024 None:intergenic
TGGGAACGCCTCGTATTGAT+TGG 0.517342 4_4:-73297252 None:intergenic
GATGGGTAGGCCACAGGCCA+AGG 0.517499 4_4:+73292491 Msa0701840:CDS
ACTGACATTGTTCGAGAACC+AGG 0.517878 4_4:-73296925 None:intergenic
ATAGTTTCCACCAGGAATGC+TGG 0.518703 4_4:-73296468 None:intergenic
AACTTGCACCACCGCCACCC+CGG 0.519283 4_4:-73291445 None:intergenic
ATCTCCCTTCTCCAGTGTAA+TGG 0.521345 4_4:+73294112 Msa0701840:CDS
TTACTGAAGCAAATAATGAA+TGG 0.524202 4_4:+73292598 Msa0701840:CDS
GACGACTAACAGCTTCGTTA+GGG 0.524337 4_4:-73291072 None:intergenic
ATGCCACTGTTTCTGGAGCC+GGG 0.524558 4_4:+73293660 Msa0701840:CDS
TAATTACTCCCTCGTGACCT+TGG 0.525295 4_4:-73291365 None:intergenic
GAGCCGGGACACATTCATCT+AGG 0.527788 4_4:+73293675 Msa0701840:CDS
TAGTGACCGATATGCTGGCC+GGG 0.529165 4_4:+73291427 Msa0701840:CDS
CATTACCATTACACTGGAGA+AGG 0.529209 4_4:-73294117 None:intergenic
GCCCTTACAAAGTAACTTGG+AGG 0.530352 4_4:+73293697 Msa0701840:CDS
ACTGGTAGTGACCGATATGC+TGG 0.533784 4_4:+73291422 Msa0701840:CDS
TCGGTGAACTTAACTTGTGT+CGG 0.536722 4_4:+73290475 None:intergenic
CGGGTATACCGGCGGCGAGT+CGG 0.537690 4_4:+73290966 Msa0701840:CDS
AACATCAGCAGCAGAACCCT+AGG 0.541212 4_4:+73297097 Msa0701840:CDS
GGTACATCATCATCGTTGTC+GGG 0.541357 4_4:+73290947 Msa0701840:CDS
CCAGTGGCAACACCAGCACC+AGG 0.542760 4_4:-73296194 None:intergenic
GTAAACTCATGCGAAGATGA+AGG 0.543874 4_4:-73294020 None:intergenic
TCCTCCAAGTTACTTTGTAA+GGG 0.545463 4_4:-73293698 None:intergenic
ATGCTCATCCCCATAATAGT+CGG 0.545903 4_4:-73293859 None:intergenic
AAAGGTCCCAGCTGTGAGTA+CGG 0.546189 4_4:-73296248 None:intergenic
TGGCTTTGTCGAAATGCACC+TGG 0.547698 4_4:-73296997 None:intergenic
CAGCTACAAATTCATTTCCG+TGG 0.549215 4_4:-73292803 None:intergenic
CCTAATCAACAATCTTTGCC+TGG 0.549819 4_4:+73296176 Msa0701840:CDS
TGTCAAGATGGGTAGGCCAC+AGG 0.551390 4_4:+73292485 Msa0701840:CDS
AATATACCGAGTCGCGGCGG+CGG 0.554134 4_4:+73291389 Msa0701840:CDS
TTCTTCCATTTCACAACCAG+AGG 0.555873 4_4:+73293947 Msa0701840:CDS
TACTAATCCTAATCACCTCC+CGG 0.559374 4_4:+73297189 Msa0701840:exon
AGTGACCGATATGCTGGCCG+GGG 0.562948 4_4:+73291428 Msa0701840:CDS
AACCACATACTTGGCATCTG+AGG 0.563576 4_4:-73293756 None:intergenic
AAAGATAAATACCTCCAAGA+TGG 0.563649 4_4:-73291864 None:intergenic
GTCTTATGCATCTAGTGTGA+TGG 0.563807 4_4:+73291818 Msa0701840:CDS
GAACCCTAACTCGAGGGGAT+CGG 0.565653 4_4:+73290890 Msa0701840:five_prime_UTR
CATTGCTTGTGTAACAGGGA+AGG 0.569151 4_4:-73294873 None:intergenic
ACAGGCAGCCACCATCTTGG+AGG 0.569197 4_4:+73291853 Msa0701840:CDS
TGTTGTTGGGACTGCTTAGG+TGG 0.569521 4_4:-73297150 None:intergenic
TGTTGATTAGGTTGAGCTTG+AGG 0.571227 4_4:-73296164 None:intergenic
TGGAAGCTGTAATACGTGCT+GGG 0.572788 4_4:-73296952 None:intergenic
GAGTATGGGATATCCTCCCT+TGG 0.575189 4_4:-73294848 None:intergenic
GTAGAGATAAGTATTGTGAT+CGG 0.576105 4_4:+73290858 Msa0701840:five_prime_UTR
ATAAATAAAGAGATAAACAC+TGG 0.577224 4_4:+73290590 Msa0701840:five_prime_UTR
AATGGCTGACATTGTCAAGA+TGG 0.577715 4_4:+73292473 Msa0701840:CDS
CTACCACCAATCTCTGGCAG+CGG 0.578357 4_4:+73296358 Msa0701840:CDS
AGCACGTATTACAGCTTCCA+GGG 0.578501 4_4:+73296955 Msa0701840:CDS
CCGAAGAGACCCAATATGGC+CGG 0.579027 4_4:+73297306 Msa0701840:three_prime_UTR
ATGTTCAACAGAGTGATGAA+TGG 0.579550 4_4:+73292637 Msa0701840:CDS
ATGTTCAACAGAGTGATGAA+TGG 0.579550 4_4:+73292676 Msa0701840:CDS
GTATAGCTCTGAGGCATGAA+CGG 0.580543 4_4:-73296290 None:intergenic
GGGCCTAGATGAATGTGTCC+CGG 0.582233 4_4:-73293678 None:intergenic
CAGGCATTGCTTGTGTAACA+GGG 0.583522 4_4:-73294877 None:intergenic
GTACTAGTAGGGGCAGCTGA+TGG 0.583533 4_4:-73296500 None:intergenic
ATGATTGTTATCCTTATACT+GGG 0.584516 4_4:-73296552 None:intergenic
CCAGGCCCTTGAACCCACAT+AGG 0.584672 4_4:-73296907 None:intergenic
GATGAGAATCCTGTTGATGT+TGG 0.584695 4_4:+73292843 Msa0701840:CDS
GCCCCTACTAGTACAACCAT+TGG 0.585988 4_4:+73296509 Msa0701840:CDS
AGCATCCACACCAGTTATGT+GGG 0.586141 4_4:-73293910 None:intergenic
GGGGCAGCTGATGGATTCAA+AGG 0.586575 4_4:-73296491 None:intergenic
ATGGCTGACATTGTCAAGAT+GGG 0.587015 4_4:+73292474 Msa0701840:CDS
CTGTCTTCATCATCACATCA+TGG 0.587021 4_4:+73292408 Msa0701840:CDS
TACATTTAACATTAGACCGT+GGG 0.587062 4_4:-73297271 None:intergenic
AGAGATAGAAAACACGAAGA+GGG 0.588714 4_4:+73290760 Msa0701840:five_prime_UTR
GACCGATATGCTGGCCGGGG+TGG 0.588824 4_4:+73291431 Msa0701840:CDS
ACAATCCTATGTGGGTTCAA+GGG 0.590132 4_4:+73296902 Msa0701840:CDS
TATCACGTCATCATATCCAA+TGG 0.592769 4_4:-73296525 None:intergenic
CATGTTACAGTCTTTGAGAG+TGG 0.592942 4_4:-73291047 None:intergenic
TAACAGGGAAGGGTGAGTAT+GGG 0.593054 4_4:-73294862 None:intergenic
GGATGCACAGCAAGGTGTTG+AGG 0.593434 4_4:-73296227 None:intergenic
GATAAATACCTCCAAGATGG+TGG 0.593978 4_4:-73291861 None:intergenic
TATACAAATACATCTAACTT+GGG 0.595181 4_4:+73292756 Msa0701840:CDS
CATATTGCTACTACCTCAGA+TGG 0.595267 4_4:+73293879 Msa0701840:CDS
ATTGCTTGTGTAACAGGGAA+GGG 0.596414 4_4:-73294872 None:intergenic
GTGCATCCGTACTCACAGCT+GGG 0.596507 4_4:+73296242 Msa0701840:CDS
TGCGGCTGAACCCTAACTCG+AGG 0.598394 4_4:+73290883 Msa0701840:five_prime_UTR
AGAATGAGAACAATCCTATG+TGG 0.598777 4_4:+73296893 Msa0701840:intron
ATCAATACGAGGCGTTCCCA+CGG 0.599819 4_4:+73297255 Msa0701840:three_prime_UTR
CATCAACAACAACTGTTGGT+GGG 0.601667 4_4:-73292713 None:intergenic
AAGCTCAGACTAAAACACTC+TGG 0.601824 4_4:-73293614 None:intergenic
CTAAATCTTCTGTCCACAGT+GGG 0.603435 4_4:+73292523 Msa0701840:CDS
GTTGGTGGGTGCTCAACAGA+AGG 0.604734 4_4:-73292699 None:intergenic
TTCAAAGGATAGTTTCCACC+AGG 0.605161 4_4:-73296476 None:intergenic
AATGGAACGCCTGCTTATGG+AGG 0.606529 4_4:+73291786 Msa0701840:CDS
GCAAGGTGTTGAGGAAGTGA+AGG 0.606894 4_4:-73296218 None:intergenic
CCTAAATCTTCTGTCCACAG+TGG 0.609597 4_4:+73292522 Msa0701840:CDS
ATAATACTCAGAATTTGGAT+GGG 0.610849 4_4:-73292736 None:intergenic
TATATCCCACATAACTGGTG+TGG 0.611883 4_4:+73293905 Msa0701840:CDS
GAGCTATACCTACATGCCAT+CGG 0.612525 4_4:+73296304 Msa0701840:CDS
GCACCGCTGCCAGAGATTGG+TGG 0.613306 4_4:-73296361 None:intergenic
GAGAGATAGAAAACACGAAG+AGG 0.613579 4_4:+73290759 Msa0701840:five_prime_UTR
ATATGATGATAATTTGTACA+AGG 0.614124 4_4:+73292923 Msa0701840:CDS
AGCAGTCCCAACAACAATTG+TGG 0.614795 4_4:+73297157 Msa0701840:CDS
CGGCAAGGGAAGCATCCCTA+GGG 0.614858 4_4:-73297113 None:intergenic
AATTTACACACAGATGAGCA+AGG 0.615714 4_4:+73293530 Msa0701840:CDS
CCAATGCATTACCATTACAC+TGG 0.615927 4_4:-73294123 None:intergenic
TGAGCAAGGGACAGAACCAG+AGG 0.616906 4_4:+73293544 Msa0701840:CDS
CTTCCAAAACCATATCCAGA+TGG 0.617034 4_4:-73296440 None:intergenic
CTGACATTGTCAAGATGGGT+AGG 0.617049 4_4:+73292478 Msa0701840:CDS
GAATACAACTACTGTCACAT+GGG 0.617527 4_4:-73297333 None:intergenic
TCCAATGGTTGTACTAGTAG+GGG 0.620354 4_4:-73296510 None:intergenic
GCATCAACAACAACTGTTGG+TGG 0.620968 4_4:-73292714 None:intergenic
AACATTCAAGTTGTGATGCG+AGG 0.621627 4_4:-73292577 None:intergenic
CAGCCATTGACACTTGACCT+GGG 0.622423 4_4:-73292458 None:intergenic
TGGGCATCAACAACAACTGT+TGG 0.624347 4_4:-73292717 None:intergenic
TTGAGGAAGTGAAGGTCCAG+TGG 0.626322 4_4:-73296210 None:intergenic
AAGGATGAGCGGCAAAGTAG+GGG 0.626473 4_4:+73290916 Msa0701840:exon
GAATGAGAACAATCCTATGT+GGG 0.626818 4_4:+73296894 Msa0701840:intron
GCGGCTGAACCCTAACTCGA+GGG 0.627579 4_4:+73290884 Msa0701840:five_prime_UTR
AGAATACAACTACTGTCACA+TGG 0.628248 4_4:-73297334 None:intergenic
CACACTAGATGCATAAGACG+TGG 0.629917 4_4:-73291814 None:intergenic
TGGATTGCAATCTGCATGGT+CGG 0.630287 4_4:+73292431 Msa0701840:CDS
AAAGCCTGCTGAAATGCCGA+TGG 0.631956 4_4:-73296320 None:intergenic
CGCTGCCAGAGATTGGTGGT+AGG 0.632641 4_4:-73296357 None:intergenic
TACCTCTGACATGTTTATCG+TGG 0.632657 4_4:-73294936 None:intergenic
GTGGGATATATTGCCATCTG+AGG 0.632746 4_4:-73293892 None:intergenic
GATTCTGTTGGTGTCCATGA+CGG 0.634224 4_4:+73292384 Msa0701840:CDS
CTGAAATGCCGATGGCATGT+AGG 0.634576 4_4:-73296312 None:intergenic
ACAACAGAACCAAGGTCACG+AGG 0.636663 4_4:+73291356 Msa0701840:CDS
AGCTGAAGACAGTTCTGTTG+AGG 0.637818 4_4:+73292821 Msa0701840:CDS
AGGATGAGCGGCAAAGTAGG+GGG 0.638263 4_4:+73290917 Msa0701840:exon
TGAAAATGGTGTTTCATCAG+TGG 0.638285 4_4:+73293487 Msa0701840:CDS
AATTTCTACCATTCTCAGAG+TGG 0.639106 4_4:+73297063 Msa0701840:CDS
AACGGTTCAAACACCAAGGG+AGG 0.641331 4_4:+73294835 Msa0701840:CDS
GCAAGGGACAGAACCAGAGG+AGG 0.642696 4_4:+73293547 Msa0701840:CDS
ATGATGAAGACAGTCCGTCA+TGG 0.643081 4_4:-73292398 None:intergenic
GATGGTATAGCAGCAGACTG+AGG 0.645781 4_4:-73296422 None:intergenic
CAGAATCAACAACAACAACC+AGG 0.645981 4_4:+73296979 Msa0701840:CDS
ACATCAGCAGCAGAACCCTA+GGG 0.646794 4_4:+73297098 Msa0701840:CDS
CAGAAATCCCGACTATTATG+GGG 0.649539 4_4:+73293851 Msa0701840:intron
ATTTACACACAGATGAGCAA+GGG 0.649851 4_4:+73293531 Msa0701840:CDS
ATCGTTGTCGGGTATACCGG+CGG 0.650301 4_4:+73290958 Msa0701840:CDS
GGTCTCTTCGGACCAAACAA+TGG 0.653982 4_4:-73297294 None:intergenic
GTGAGTACGGATGCACAGCA+AGG 0.655238 4_4:-73296235 None:intergenic
CACTCTCAAAGACTGTAACA+TGG 0.656952 4_4:+73291048 Msa0701840:CDS
GTTTCCACCAGGAATGCTGG+TGG 0.657460 4_4:-73296465 None:intergenic
ATTACCATTACACTGGAGAA+GGG 0.657757 4_4:-73294116 None:intergenic
CGGCTGAACCCTAACTCGAG+GGG 0.659200 4_4:+73290885 Msa0701840:five_prime_UTR
CTTCAACGGTTCAAACACCA+AGG 0.659295 4_4:+73294831 Msa0701840:CDS
CAACAGAACCAAGGTCACGA+GGG 0.662269 4_4:+73291357 Msa0701840:CDS
AATACAACTACTGTCACATG+GGG 0.662553 4_4:-73297332 None:intergenic
CATCACTCTGTTGAACATTG+GGG 0.665234 4_4:-73292671 None:intergenic
TATAATATACCGAGTCGCGG+CGG 0.665825 4_4:+73291386 Msa0701840:CDS
AATAGACAACTGCAGAACCA+CGG 0.668240 4_4:+73292786 Msa0701840:CDS
GTACATTTAACATTAGACCG+TGG 0.669271 4_4:-73297272 None:intergenic
GGGATCGGAGTAAGGATGAG+CGG 0.672525 4_4:+73290905 Msa0701840:exon
GCCTGCAAAATATAGCAACA+TGG 0.677043 4_4:+73294895 Msa0701840:CDS
TGTTAATAACATACGGACGA+TGG 0.678696 4_4:-73297556 None:intergenic
TAAGTATTGTGATCGGAGTG+CGG 0.680201 4_4:+73290865 Msa0701840:five_prime_UTR
CATTCTGATGATTCCCACTG+TGG 0.681276 4_4:-73292536 None:intergenic
GCCATATATGAGACAGAACA+CGG 0.681877 4_4:-73297475 None:intergenic
TTCCACGATAAACATGTCAG+AGG 0.686512 4_4:+73294934 Msa0701840:CDS
AGTTCCACCAGCATTCCTGG+TGG 0.687385 4_4:+73296461 Msa0701840:CDS
AATTATAATATACCGAGTCG+CGG 0.693817 4_4:+73291383 Msa0701840:CDS
GTGGACAGAAGATTTAGGCA+CGG 0.697837 4_4:-73292517 None:intergenic
TTCAACGGTTCAAACACCAA+GGG 0.698105 4_4:+73294832 Msa0701840:CDS
ATGGTGGATTGCAATCTGCA+TGG 0.698767 4_4:+73292427 Msa0701840:CDS
TGTCCCGGCTCCAGAAACAG+TGG 0.704706 4_4:-73293663 None:intergenic
TCTTCATCATCACATCATGG+TGG 0.706000 4_4:+73292411 Msa0701840:CDS
ACTAGATGCATAAGACGTGG+AGG 0.713779 4_4:-73291811 None:intergenic
GGCATGTAGGTATAGCTCTG+AGG 0.714504 4_4:-73296299 None:intergenic
AAGCTGTAATACGTGCTGGG+AGG 0.724449 4_4:-73296949 None:intergenic
GAAAATGACCAATCAATACG+AGG 0.743139 4_4:+73297244 Msa0701840:three_prime_UTR
GTAAGGATACAACAGAACCA+AGG 0.748600 4_4:+73291348 Msa0701840:CDS
AAATTATTAGGGTACCCGTG+CGG 0.792199 4_4:-73297045 None:intergenic
ATACAACTACTGTCACATGG+GGG 0.798216 4_4:-73297331 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAATTGATAGAAA+GGG - chr4_4:73290521-73290540 None:intergenic 10.0%
!! AAAAAAAAAAATTGATAGAA+AGG - chr4_4:73290522-73290541 None:intergenic 10.0%
!! AAGTATTATGTATTATATTA+AGG - chr4_4:73294629-73294648 None:intergenic 10.0%
!!! CTTTATTTATCTTTTTATAG+AGG - chr4_4:73290580-73290599 None:intergenic 15.0%
!!! TTTCTTTTTTGTATTTGTTT+AGG + chr4_4:73291325-73291344 Msa0701840:intron 15.0%
!!! TTCTTTTTTGTATTTGTTTA+GGG + chr4_4:73291326-73291345 Msa0701840:intron 15.0%
!!! ATCATTTAAAGCAAATTTTA+TGG - chr4_4:73293040-73293059 None:intergenic 15.0%
!!! GTTTGTACATTATTATTTTA+TGG + chr4_4:73293117-73293136 Msa0701840:intron 15.0%
!!! AACAATATATATTTTAAAGC+TGG + chr4_4:73294167-73294186 Msa0701840:intron 15.0%
!! TAATTAATTATAATCAGTTC+TGG + chr4_4:73294413-73294432 Msa0701840:intron 15.0%
!! TATGTATTATATTAAGGAAA+GGG - chr4_4:73294623-73294642 None:intergenic 15.0%
!! TTATGTATTATATTAAGGAA+AGG - chr4_4:73294624-73294643 None:intergenic 15.0%
!! ATAATTAAAATAGAATTACC+AGG + chr4_4:73295538-73295557 Msa0701840:intron 15.0%
!!! GAAATGAAACTTTTTTTTAA+GGG + chr4_4:73295576-73295595 Msa0701840:intron 15.0%
!!! AAATGAAACTTTTTTTTAAG+GGG + chr4_4:73295577-73295596 Msa0701840:intron 15.0%
!!! AAAATTGGTTACTATTTTAT+AGG - chr4_4:73295774-73295793 None:intergenic 15.0%
!!! TATAAAATAGTAACCAATTT+TGG + chr4_4:73295773-73295792 Msa0701840:intron 15.0%
!!! TTATATTTTGGCTTATTATA+TGG + chr4_4:73296839-73296858 Msa0701840:intron 15.0%
!! ATAAATAAAGAGATAAACAC+TGG + chr4_4:73290590-73290609 Msa0701840:five_prime_UTR 20.0%
!! ATATAACATAGCTATCAAAA+AGG + chr4_4:73290625-73290644 Msa0701840:five_prime_UTR 20.0%
!!! ATGATGTTTGTTTCTATTTT+TGG + chr4_4:73291508-73291527 Msa0701840:intron 20.0%
!! TATACTAAAATAACTGTACA+TGG + chr4_4:73291898-73291917 Msa0701840:intron 20.0%
!!! GAAATTAAGTTTTCAAAAAG+AGG - chr4_4:73292092-73292111 None:intergenic 20.0%
!! CTTTATAATACTTCTACATA+TGG - chr4_4:73292292-73292311 None:intergenic 20.0%
!! TTTGTATAATACTCAGAATT+TGG - chr4_4:73292744-73292763 None:intergenic 20.0%
!! TTATACAAATACATCTAACT+TGG + chr4_4:73292755-73292774 Msa0701840:CDS 20.0%
!! TATACAAATACATCTAACTT+GGG + chr4_4:73292756-73292775 Msa0701840:CDS 20.0%
!!! ATATGATGATAATTTGTACA+AGG + chr4_4:73292923-73292942 Msa0701840:CDS 20.0%
!! TTCTATAACTTAGATATTTC+TGG - chr4_4:73293190-73293209 None:intergenic 20.0%
!! TAAGTTATAGAAATAGCATA+AGG + chr4_4:73293198-73293217 Msa0701840:intron 20.0%
!! GCTCTTTAATTAACTAAAAT+TGG + chr4_4:73294201-73294220 Msa0701840:intron 20.0%
!! TAAATGATATAACTAGAGTT+TGG + chr4_4:73294228-73294247 Msa0701840:intron 20.0%
!! TTTGTTAAAATTTCTTTCTC+CGG + chr4_4:73294505-73294524 Msa0701840:intron 20.0%
!! TCTAACTTATATTGCTTTAT+AGG + chr4_4:73294775-73294794 Msa0701840:intron 20.0%
!! ATGAATTCCATAACATTATT+TGG - chr4_4:73295067-73295086 None:intergenic 20.0%
!! AAATTGTTAACCAGAATTAT+CGG - chr4_4:73295118-73295137 None:intergenic 20.0%
!! ATATAAGTTATGATATGTTC+TGG + chr4_4:73295274-73295293 Msa0701840:intron 20.0%
!!! GGAAATGAAACTTTTTTTTA+AGG + chr4_4:73295575-73295594 Msa0701840:intron 20.0%
!! AGTACTGCAAAAATATAATT+GGG - chr4_4:73295687-73295706 None:intergenic 20.0%
!! TAGTACTGCAAAAATATAAT+TGG - chr4_4:73295688-73295707 None:intergenic 20.0%
!! TATATTGATACTTCCAAAAT+TGG - chr4_4:73295789-73295808 None:intergenic 20.0%
!!! TTTTATCCCAAATTTTGTTA+CGG + chr4_4:73295839-73295858 Msa0701840:intron 20.0%
!! AAGATTTATTAGAGTTAGTT+TGG - chr4_4:73295992-73296011 None:intergenic 20.0%
!! TCAATTATAATCATCTTTAC+TGG - chr4_4:73296017-73296036 None:intergenic 20.0%
!! TAACTTATCATATTAGCAAA+AGG - chr4_4:73296269-73296288 None:intergenic 20.0%
!!! GAAATGCTATTTTTATATTG+TGG - chr4_4:73296389-73296408 None:intergenic 20.0%
!!! TCATATGACTTGTTATATTT+TGG + chr4_4:73296827-73296846 Msa0701840:intron 20.0%
!! AGATGAGAAAAATGTAAAAT+GGG - chr4_4:73297438-73297457 None:intergenic 20.0%
!! AAGATGAGAAAAATGTAAAA+TGG - chr4_4:73297439-73297458 None:intergenic 20.0%
!! AAAAAGCTGTTAATAACATA+CGG - chr4_4:73297566-73297585 None:intergenic 20.0%
!!! AGTTACGATTGTTTCTTTTT+TGG + chr4_4:73290783-73290802 Msa0701840:five_prime_UTR 25.0%
!!! TTTTGTATTTGTTTAGGGTA+AGG + chr4_4:73291331-73291350 Msa0701840:intron 25.0%
! ACATACCATTATTACTGAAT+TGG - chr4_4:73291475-73291494 None:intergenic 25.0%
!!! AAGACTTTTTTACACTAAAG+TGG - chr4_4:73291583-73291602 None:intergenic 25.0%
!! TCCATTTTCTTTCTTAAACA+CGG - chr4_4:73291772-73291791 None:intergenic 25.0%
! GGATAAAAACTAAATTCTTG+TGG + chr4_4:73291928-73291947 Msa0701840:intron 25.0%
!!! ATTTTCAAGCCATATAGAAA+CGG - chr4_4:73292008-73292027 None:intergenic 25.0%
!! TTATTCTTATCTAAAACAGC+TGG + chr4_4:73292127-73292146 Msa0701840:intron 25.0%
!!! TTAATTCTGTGGATTAGTTA+TGG + chr4_4:73292165-73292184 Msa0701840:intron 25.0%
!! AAATCAATAAATGCCCATTT+TGG + chr4_4:73292221-73292240 Msa0701840:intron 25.0%
! TTACATCTCATTTATCTTCA+GGG - chr4_4:73292249-73292268 None:intergenic 25.0%
! TTTACATCTCATTTATCTTC+AGG - chr4_4:73292250-73292269 None:intergenic 25.0%
!!! ACTAAACAGTATTGATATGA+AGG + chr4_4:73292321-73292340 Msa0701840:intron 25.0%
! TTACTGAAGCAAATAATGAA+TGG + chr4_4:73292598-73292617 Msa0701840:CDS 25.0%
! ATAATACTCAGAATTTGGAT+GGG - chr4_4:73292739-73292758 None:intergenic 25.0%
! TATAATACTCAGAATTTGGA+TGG - chr4_4:73292740-73292759 None:intergenic 25.0%
!!! TCATCAGATATAATTTTAGC+AGG - chr4_4:73292882-73292901 None:intergenic 25.0%
! ATTATATCTGATGATAATCC+AGG + chr4_4:73292888-73292907 Msa0701840:CDS 25.0%
!! AGCAAATTTTATGGAAAACA+TGG - chr4_4:73293031-73293050 None:intergenic 25.0%
! AGCGAATTTAATTCACATAA+TGG - chr4_4:73293084-73293103 None:intergenic 25.0%
!!! TTTTTAAAACCAACTACACA+TGG - chr4_4:73293148-73293167 None:intergenic 25.0%
!!! GGCGATATTATTATTTCTAT+TGG + chr4_4:73293250-73293269 Msa0701840:intron 25.0%
!! TTTTAAACCATTCACACATA+CGG - chr4_4:73293303-73293322 None:intergenic 25.0%
!! CTATTTTATAACCACATACT+TGG - chr4_4:73293768-73293787 None:intergenic 25.0%
! CAAGTATGTGGTTATAAAAT+AGG + chr4_4:73293766-73293785 Msa0701840:intron 25.0%
!! CATTTTACTCTCTTAAGAAT+GGG - chr4_4:73294302-73294321 None:intergenic 25.0%
!!! TCTTTTTGATAGTAGAAAAC+TGG + chr4_4:73294343-73294362 Msa0701840:intron 25.0%
! TTGTTAAAATTTCTTTCTCC+GGG + chr4_4:73294506-73294525 Msa0701840:intron 25.0%
!! ATGTTTCATTCTTTTGGATT+GGG + chr4_4:73294529-73294548 Msa0701840:intron 25.0%
! TGTCCCATTACATTATATTA+TGG + chr4_4:73294650-73294669 Msa0701840:intron 25.0%
! GCACCATAATATAATGTAAT+GGG - chr4_4:73294656-73294675 None:intergenic 25.0%
! TGCACCATAATATAATGTAA+TGG - chr4_4:73294657-73294676 None:intergenic 25.0%
! TATTAACAAGCTATTGAAAG+AGG + chr4_4:73294988-73295007 Msa0701840:intron 25.0%
! TTCTTAGCCAAATAATGTTA+TGG + chr4_4:73295057-73295076 Msa0701840:intron 25.0%
! GAATTCATGTGTACATTAAA+GGG + chr4_4:73295079-73295098 Msa0701840:intron 25.0%
!! TTTATCCCAAATTTTGTTAC+GGG + chr4_4:73295840-73295859 Msa0701840:intron 25.0%
! TACATATACACAAACAATGT+TGG - chr4_4:73295930-73295949 None:intergenic 25.0%
!!! TTTTAACCCCCTTTTTTTAA+GGG + chr4_4:73295962-73295981 Msa0701840:intron 25.0%
!!! GACATAGTTTAGTTTTAAGT+TGG + chr4_4:73296035-73296054 Msa0701840:intron 25.0%
!!! ATTTTTTTTTGTCAAGATGC+AGG + chr4_4:73296115-73296134 Msa0701840:intron 25.0%
! ATGATTGTTATCCTTATACT+GGG - chr4_4:73296555-73296574 None:intergenic 25.0%
! TATGATTGTTATCCTTATAC+TGG - chr4_4:73296556-73296575 None:intergenic 25.0%
!! TCAACTTTAATCAAGCATTT+TGG - chr4_4:73296614-73296633 None:intergenic 25.0%
!! TCTTTATGTCATGTTCTTTT+TGG + chr4_4:73296755-73296774 Msa0701840:intron 25.0%
!!! ATTTTGGCTTATTATATGGA+AGG + chr4_4:73296843-73296862 Msa0701840:intron 25.0%
! GAGAATGGTAGAAATTATTA+GGG - chr4_4:73297059-73297078 None:intergenic 25.0%
! TGAGAATGGTAGAAATTATT+AGG - chr4_4:73297060-73297079 None:intergenic 25.0%
! ATGTTAAATGTACCATTGTT+TGG + chr4_4:73297282-73297301 Msa0701840:three_prime_UTR 25.0%
!!! AAAGAGTATTGTTGTAATAC+AGG - chr4_4:73297413-73297432 None:intergenic 25.0%
! TAATGATGACCAAGAATAAA+AGG - chr4_4:73297502-73297521 None:intergenic 25.0%
! GTAGAGATAAGTATTGTGAT+CGG + chr4_4:73290858-73290877 Msa0701840:five_prime_UTR 30.0%
CAAACGAGAAAAGAAAAAAG+AGG + chr4_4:73291223-73291242 Msa0701840:CDS 30.0%
AATTATAATATACCGAGTCG+CGG + chr4_4:73291383-73291402 Msa0701840:CDS 30.0%
TCGAACCAATTCAGTAATAA+TGG + chr4_4:73291467-73291486 Msa0701840:CDS 30.0%
AATGGTATGTATTTCGAATC+TGG + chr4_4:73291485-73291504 Msa0701840:intron 30.0%
AAAGTCATCAAATCGTTTCT+TGG - chr4_4:73291665-73291684 None:intergenic 30.0%
!! TTAATTTTCGCCGTTGTTTT+TGG + chr4_4:73291715-73291734 Msa0701840:intron 30.0%
AGTCTGATTTCCAAAAACAA+CGG - chr4_4:73291728-73291747 None:intergenic 30.0%
!!! TGTTTTTGGAAATCAGACTA+TGG + chr4_4:73291729-73291748 Msa0701840:intron 30.0%
! CCATTTTCTTTCTTAAACAC+GGG - chr4_4:73291771-73291790 None:intergenic 30.0%
! TGATGGACAATAATGTAAAC+AGG + chr4_4:73291835-73291854 Msa0701840:CDS 30.0%
AAAGATAAATACCTCCAAGA+TGG - chr4_4:73291867-73291886 None:intergenic 30.0%
CTAAAATAACTGTACATGGT+TGG + chr4_4:73291902-73291921 Msa0701840:intron 30.0%
TAAATCTAGCCGTTTCTATA+TGG + chr4_4:73291996-73292015 Msa0701840:intron 30.0%
AAAATCCGATGCTATTGAAA+AGG + chr4_4:73292023-73292042 Msa0701840:intron 30.0%
AAATCCGATGCTATTGAAAA+GGG + chr4_4:73292024-73292043 Msa0701840:intron 30.0%
!!! AACTTGCTTTTGGGATAAAT+TGG - chr4_4:73292055-73292074 None:intergenic 30.0%
AATTTATCCCAAAAGCAAGT+TGG + chr4_4:73292054-73292073 Msa0701840:intron 30.0%
TACATCTCATTTATCTTCAG+GGG - chr4_4:73292248-73292267 None:intergenic 30.0%
ATACTTCTACATATGGAAGA+GGG - chr4_4:73292285-73292304 None:intergenic 30.0%
AATACTTCTACATATGGAAG+AGG - chr4_4:73292286-73292305 None:intergenic 30.0%
ACTGCAACAGAATTGAATAA+TGG - chr4_4:73292364-73292383 None:intergenic 30.0%
TGATCATGTAATTGAAGTGA+TGG + chr4_4:73293056-73293075 Msa0701840:intron 30.0%
GTATGTGTGAATGGTTTAAA+AGG + chr4_4:73293302-73293321 Msa0701840:intron 30.0%
ATATTCCTTTCAGCTGAAAA+TGG + chr4_4:73293473-73293492 Msa0701840:intron 30.0%
! GATCCTGTTTGTTAAAAACT+AGG + chr4_4:73294252-73294271 Msa0701840:intron 30.0%
!! TGACCTAGTTTTTAACAAAC+AGG - chr4_4:73294258-73294277 None:intergenic 30.0%
! CCATTTTACTCTCTTAAGAA+TGG - chr4_4:73294303-73294322 None:intergenic 30.0%
CCATTCTTAAGAGAGTAAAA+TGG + chr4_4:73294300-73294319 Msa0701840:intron 30.0%
! GATGTTTCATTCTTTTGGAT+TGG + chr4_4:73294528-73294547 Msa0701840:intron 30.0%
GGAATTCATGTGTACATTAA+AGG + chr4_4:73295078-73295097 Msa0701840:intron 30.0%
TATGATGCACAAATACGATA+CGG + chr4_4:73295230-73295249 Msa0701840:intron 30.0%
AAAAAAAGTTTCATTTCCCC+TGG - chr4_4:73295573-73295592 None:intergenic 30.0%
! GGCAAAAAGTTTTTCTTGTT+CGG + chr4_4:73295656-73295675 Msa0701840:intron 30.0%
GAATACCCGTAACAAAATTT+GGG - chr4_4:73295848-73295867 None:intergenic 30.0%
GAAATAGCAAAGTGAATCAA+AGG + chr4_4:73295868-73295887 Msa0701840:intron 30.0%
AATCAAAGGAATGTTCTTAG+AGG + chr4_4:73295882-73295901 Msa0701840:intron 30.0%
ATCAAAGGAATGTTCTTAGA+GGG + chr4_4:73295883-73295902 Msa0701840:intron 30.0%
!! GTTTTAACCCCCTTTTTTTA+AGG + chr4_4:73295961-73295980 Msa0701840:intron 30.0%
!! AGTTGGTGTCTTGATTTTAT+TGG + chr4_4:73296052-73296071 Msa0701840:intron 30.0%
!!! TGTCTTGATTTTATTGGTTC+AGG + chr4_4:73296058-73296077 Msa0701840:intron 30.0%
!!! GTCTTGATTTTATTGGTTCA+GGG + chr4_4:73296059-73296078 Msa0701840:intron 30.0%
! CTTTAATCAAGCATTTTGGA+AGG - chr4_4:73296610-73296629 None:intergenic 30.0%
CTTAGAGAAGAAATCAAACA+GGG - chr4_4:73296644-73296663 None:intergenic 30.0%
ACTTAGAGAAGAAATCAAAC+AGG - chr4_4:73296645-73296664 None:intergenic 30.0%
TACATTTAACATTAGACCGT+GGG - chr4_4:73297274-73297293 None:intergenic 30.0%
! TATATGGCTCCTTTTATTCT+TGG + chr4_4:73297490-73297509 Msa0701840:three_prime_UTR 30.0%
! TTTTCTATCTCTCTCTCTCT+CGG - chr4_4:73290752-73290771 None:intergenic 35.0%
AGAGATAGAAAACACGAAGA+GGG + chr4_4:73290760-73290779 Msa0701840:five_prime_UTR 35.0%
AGTTAGTGATGAGAGAGAAA+GGG - chr4_4:73291122-73291141 None:intergenic 35.0%
TAGTTAGTGATGAGAGAGAA+AGG - chr4_4:73291123-73291142 None:intergenic 35.0%
TCTCTCATCACTAACTAGTT+AGG + chr4_4:73291126-73291145 Msa0701840:intron 35.0%
CTCTCATCACTAACTAGTTA+GGG + chr4_4:73291127-73291146 Msa0701840:intron 35.0%
! TCTTGTAGATCCTTTTCATG+AGG + chr4_4:73291193-73291212 Msa0701840:intron 35.0%
TTGCTCTTAACCTCATGAAA+AGG - chr4_4:73291206-73291225 None:intergenic 35.0%
CCCGTGTTTAAGAAAGAAAA+TGG + chr4_4:73291768-73291787 Msa0701840:CDS 35.0%
TCTTGTGGTTATGATGTGTT+TGG + chr4_4:73291943-73291962 Msa0701840:intron 35.0%
!!! TTGCTTTTGGGATAAATTGG+AGG - chr4_4:73292052-73292071 None:intergenic 35.0%
TATTGATATGAAGGCCAAGA+TGG + chr4_4:73292330-73292349 Msa0701840:intron 35.0%
TAATGGTGAAACATCCATCT+TGG - chr4_4:73292347-73292366 None:intergenic 35.0%
TGAACATTGGGTTCAATAGA+AGG - chr4_4:73292624-73292643 None:intergenic 35.0%
TCATCACTCTGTTGAACATT+GGG - chr4_4:73292636-73292655 None:intergenic 35.0%
TTCATCACTCTGTTGAACAT+TGG - chr4_4:73292637-73292656 None:intergenic 35.0%
ATGTTCAACAGAGTGATGAA+TGG + chr4_4:73292637-73292656 Msa0701840:CDS 35.0%
TCATCACTCTGTTGAACATT+GGG - chr4_4:73292636-73292655 None:intergenic 35.0%
TTCATCACTCTGTTGAACAT+TGG - chr4_4:73292637-73292656 None:intergenic 35.0%
ATGTTCAACAGAGTGATGAA+TGG + chr4_4:73292637-73292656 Msa0701840:CDS 35.0%
! ATCCATTTGTTGAGTCAATC+TGG + chr4_4:73293229-73293248 Msa0701840:intron 35.0%
! CAATTAGAAAGCATACACAC+AGG - chr4_4:73293353-73293372 None:intergenic 35.0%
! AAACACCATTTTCAGCTGAA+AGG - chr4_4:73293481-73293500 None:intergenic 35.0%
TGAAAATGGTGTTTCATCAG+TGG + chr4_4:73293487-73293506 Msa0701840:CDS 35.0%
AATTTACACACAGATGAGCA+AGG + chr4_4:73293530-73293549 Msa0701840:CDS 35.0%
ATTTACACACAGATGAGCAA+GGG + chr4_4:73293531-73293550 Msa0701840:CDS 35.0%
!! GAAACAGTGGCATTTTGTTT+TGG - chr4_4:73293653-73293672 None:intergenic 35.0%
AAACAAAATGCCACTGTTTC+TGG + chr4_4:73293653-73293672 Msa0701840:CDS 35.0%
! TCCTCCAAGTTACTTTGTAA+GGG - chr4_4:73293701-73293720 None:intergenic 35.0%
CTACTGATGTTTCAGCAATT+GGG + chr4_4:73293732-73293751 Msa0701840:CDS 35.0%
! ATATGCAACTTCTGGTTGTT+GGG - chr4_4:73294057-73294076 None:intergenic 35.0%
ATTACCATTACACTGGAGAA+GGG - chr4_4:73294119-73294138 None:intergenic 35.0%
!! TGCATTGGTCTGTTAGATTT+TGG + chr4_4:73294138-73294157 Msa0701840:intron 35.0%
! TTTAAAGCTGGTGTCTAGTT+TGG + chr4_4:73294179-73294198 Msa0701840:intron 35.0%
GTTAAAAACTAGGTCATCGT+TGG + chr4_4:73294262-73294281 Msa0701840:intron 35.0%
TCCAAAAGAATGAAACATCC+CGG - chr4_4:73294527-73294546 None:intergenic 35.0%
TAAGGAAAGGGTTTGTATAC+AGG - chr4_4:73294611-73294630 None:intergenic 35.0%
AGAAATTTGCATTCCCTTAG+CGG - chr4_4:73295164-73295183 None:intergenic 35.0%
ACTGAGCTACACAAAATCTA+GGG - chr4_4:73295187-73295206 None:intergenic 35.0%
GTATCGTATTTGTGCATCAT+AGG - chr4_4:73295231-73295250 None:intergenic 35.0%
ATGATGCACAAATACGATAC+GGG + chr4_4:73295231-73295250 Msa0701840:intron 35.0%
GTAGATGACTAGCATTTATC+AGG - chr4_4:73295724-73295743 None:intergenic 35.0%
ATAAATGCTAGTCATCTACG+AGG + chr4_4:73295725-73295744 Msa0701840:intron 35.0%
TAAATGCTAGTCATCTACGA+GGG + chr4_4:73295726-73295745 Msa0701840:intron 35.0%
CGAATACCCGTAACAAAATT+TGG - chr4_4:73295849-73295868 None:intergenic 35.0%
TCAAAGGAATGTTCTTAGAG+GGG + chr4_4:73295884-73295903 Msa0701840:intron 35.0%
TTGGCGTACCCTTAAAAAAA+GGG - chr4_4:73295973-73295992 None:intergenic 35.0%
TTTGGCGTACCCTTAAAAAA+AGG - chr4_4:73295974-73295993 None:intergenic 35.0%
!!! ATTTTATTGGTTCAGGGAGA+GGG + chr4_4:73296065-73296084 Msa0701840:intron 35.0%
! ATACCATCTGGATATGGTTT+TGG + chr4_4:73296437-73296456 Msa0701840:CDS 35.0%
ATCCAATGGTTGTACTAGTA+GGG - chr4_4:73296514-73296533 None:intergenic 35.0%
TATCCAATGGTTGTACTAGT+AGG - chr4_4:73296515-73296534 None:intergenic 35.0%
TATCACGTCATCATATCCAA+TGG - chr4_4:73296528-73296547 None:intergenic 35.0%
TCATATGATTTCACTTCAGC+AGG + chr4_4:73296571-73296590 Msa0701840:CDS 35.0%
TTTACATTACAATGGCTGCA+TGG - chr4_4:73296695-73296714 None:intergenic 35.0%
GCCATTGTAATGTAAACAGA+CGG + chr4_4:73296699-73296718 Msa0701840:intron 35.0%
CCATTGTAATGTAAACAGAC+GGG + chr4_4:73296700-73296719 Msa0701840:intron 35.0%
AGACAACTAAATGAAGCACA+TGG - chr4_4:73296738-73296757 None:intergenic 35.0%
!! ATGTCATGTTCTTTTTGGCA+AGG + chr4_4:73296760-73296779 Msa0701840:intron 35.0%
AGAATGAGAACAATCCTATG+TGG + chr4_4:73296893-73296912 Msa0701840:intron 35.0%
GAATGAGAACAATCCTATGT+GGG + chr4_4:73296894-73296913 Msa0701840:intron 35.0%
AATTTCTACCATTCTCAGAG+TGG + chr4_4:73297063-73297082 Msa0701840:CDS 35.0%
!! GTTTTGCCACAATTGTTGTT+GGG - chr4_4:73297166-73297185 None:intergenic 35.0%
! TGTTTTGCCACAATTGTTGT+TGG - chr4_4:73297167-73297186 None:intergenic 35.0%
ACATCAAGACCCTTAAAAAC+CGG - chr4_4:73297211-73297230 None:intergenic 35.0%
GAAAATGACCAATCAATACG+AGG + chr4_4:73297244-73297263 Msa0701840:three_prime_UTR 35.0%
GTACATTTAACATTAGACCG+TGG - chr4_4:73297275-73297294 None:intergenic 35.0%
AATACAACTACTGTCACATG+GGG - chr4_4:73297335-73297354 None:intergenic 35.0%
GAATACAACTACTGTCACAT+GGG - chr4_4:73297336-73297355 None:intergenic 35.0%
AGAATACAACTACTGTCACA+TGG - chr4_4:73297337-73297356 None:intergenic 35.0%
TATGCTCGTGATGTTAACTT+AGG + chr4_4:73297367-73297386 Msa0701840:three_prime_UTR 35.0%
TGTTAATAACATACGGACGA+TGG - chr4_4:73297559-73297578 None:intergenic 35.0%
GAGAGATAGAAAACACGAAG+AGG + chr4_4:73290759-73290778 Msa0701840:five_prime_UTR 40.0%
! TAAGTATTGTGATCGGAGTG+CGG + chr4_4:73290865-73290884 Msa0701840:five_prime_UTR 40.0%
AGGTACATCATCATCGTTGT+CGG + chr4_4:73290946-73290965 Msa0701840:CDS 40.0%
! CATGTTACAGTCTTTGAGAG+TGG - chr4_4:73291050-73291069 None:intergenic 40.0%
CACTCTCAAAGACTGTAACA+TGG + chr4_4:73291048-73291067 Msa0701840:CDS 40.0%
GTTAGTCGTCTTCTTTCTCA+AGG + chr4_4:73291085-73291104 Msa0701840:CDS 40.0%
GTAAGGATACAACAGAACCA+AGG + chr4_4:73291348-73291367 Msa0701840:CDS 40.0%
GTCTTATGCATCTAGTGTGA+TGG + chr4_4:73291818-73291837 Msa0701840:CDS 40.0%
GATAAATACCTCCAAGATGG+TGG - chr4_4:73291864-73291883 None:intergenic 40.0%
ATAACTGTACATGGTTGGAG+TGG + chr4_4:73291907-73291926 Msa0701840:intron 40.0%
! GGAACCCTTTTCAATAGCAT+CGG - chr4_4:73292031-73292050 None:intergenic 40.0%
!! TTGACAGCCAACTTGCTTTT+GGG - chr4_4:73292064-73292083 None:intergenic 40.0%
!! TTTGACAGCCAACTTGCTTT+TGG - chr4_4:73292065-73292084 None:intergenic 40.0%
!! CTCTGTGCTGATTAATTCTG+TGG + chr4_4:73292154-73292173 Msa0701840:intron 40.0%
TATCTTCAGGGGACCAAAAT+GGG - chr4_4:73292237-73292256 None:intergenic 40.0%
TTATCTTCAGGGGACCAAAA+TGG - chr4_4:73292238-73292257 None:intergenic 40.0%
TTCTGTTGCAGTGATTCTGT+TGG + chr4_4:73292372-73292391 Msa0701840:intron 40.0%
CTGTCTTCATCATCACATCA+TGG + chr4_4:73292408-73292427 Msa0701840:CDS 40.0%
TCTTCATCATCACATCATGG+TGG + chr4_4:73292411-73292430 Msa0701840:CDS 40.0%
AATGGCTGACATTGTCAAGA+TGG + chr4_4:73292473-73292492 Msa0701840:CDS 40.0%
ATGGCTGACATTGTCAAGAT+GGG + chr4_4:73292474-73292493 Msa0701840:CDS 40.0%
CTAAATCTTCTGTCCACAGT+GGG + chr4_4:73292523-73292542 Msa0701840:CDS 40.0%
!! AACATTCAAGTTGTGATGCG+AGG - chr4_4:73292580-73292599 None:intergenic 40.0%
TGAACATTGGGGTCAATAGA+AGG - chr4_4:73292663-73292682 None:intergenic 40.0%
CATCACTCTGTTGAACATTG+GGG - chr4_4:73292635-73292654 None:intergenic 40.0%
CATCAACAACAACTGTTGGT+GGG - chr4_4:73292716-73292735 None:intergenic 40.0%
AATAGACAACTGCAGAACCA+CGG + chr4_4:73292786-73292805 Msa0701840:CDS 40.0%
CAGCTACAAATTCATTTCCG+TGG - chr4_4:73292806-73292825 None:intergenic 40.0%
GATGAGAATCCTGTTGATGT+TGG + chr4_4:73292843-73292862 Msa0701840:CDS 40.0%
!! CATCCTTTTGATGACAACGA+AGG + chr4_4:73292972-73292991 Msa0701840:CDS 40.0%
TCACCTTCGTTGTCATCAAA+AGG - chr4_4:73292978-73292997 None:intergenic 40.0%
ATGGTTGTTCCATGTGTAGT+TGG + chr4_4:73293136-73293155 Msa0701840:intron 40.0%
TCTAACTCCGTATGTGTGAA+TGG + chr4_4:73293293-73293312 Msa0701840:intron 40.0%
AAAGCATACACACAGGTACA+TGG - chr4_4:73293346-73293365 None:intergenic 40.0%
ACATGTGCCTTACATACATG+TGG + chr4_4:73293427-73293446 Msa0701840:intron 40.0%
TCAGAGACCACATGTATGTA+AGG - chr4_4:73293437-73293456 None:intergenic 40.0%
GGTCTCTGAGTCTTAATTTC+TGG + chr4_4:73293448-73293467 Msa0701840:intron 40.0%
GTATGGAGTTGTAGGTGATT+TGG - chr4_4:73293593-73293612 None:intergenic 40.0%
!! GACTAAAACACTCTGGAGTA+TGG - chr4_4:73293610-73293629 None:intergenic 40.0%
AAGCTCAGACTAAAACACTC+TGG - chr4_4:73293617-73293636 None:intergenic 40.0%
!!! GAGTGTTTTAGTCTGAGCTT+TGG + chr4_4:73293617-73293636 Msa0701840:CDS 40.0%
!!! AGTCTGAGCTTTGGAAGTTT+TGG + chr4_4:73293626-73293645 Msa0701840:CDS 40.0%
TAGGCCCTTACAAAGTAACT+TGG + chr4_4:73293694-73293713 Msa0701840:CDS 40.0%
! CTCCTCCAAGTTACTTTGTA+AGG - chr4_4:73293702-73293721 None:intergenic 40.0%
GCTACTGATGTTTCAGCAAT+TGG + chr4_4:73293731-73293750 Msa0701840:CDS 40.0%
TGCAGAAATCCCGACTATTA+TGG + chr4_4:73293849-73293868 Msa0701840:intron 40.0%
GCAGAAATCCCGACTATTAT+GGG + chr4_4:73293850-73293869 Msa0701840:intron 40.0%
CAGAAATCCCGACTATTATG+GGG + chr4_4:73293851-73293870 Msa0701840:intron 40.0%
ATGCTCATCCCCATAATAGT+CGG - chr4_4:73293862-73293881 None:intergenic 40.0%
CATATTGCTACTACCTCAGA+TGG + chr4_4:73293879-73293898 Msa0701840:CDS 40.0%
GGCAATATATCCCACATAAC+TGG + chr4_4:73293900-73293919 Msa0701840:CDS 40.0%
TATATCCCACATAACTGGTG+TGG + chr4_4:73293905-73293924 Msa0701840:CDS 40.0%
TTCTTCCATTTCACAACCAG+AGG + chr4_4:73293947-73293966 Msa0701840:CDS 40.0%
TAAAGCCTCTGGTTGTGAAA+TGG - chr4_4:73293955-73293974 None:intergenic 40.0%
! TTTTCCTGAGCAGTTTCAGA+GGG - chr4_4:73293987-73294006 None:intergenic 40.0%
! ATTTTCCTGAGCAGTTTCAG+AGG - chr4_4:73293988-73294007 None:intergenic 40.0%
GTAAACTCATGCGAAGATGA+AGG - chr4_4:73294023-73294042 None:intergenic 40.0%
! GATATGCAACTTCTGGTTGT+TGG - chr4_4:73294058-73294077 None:intergenic 40.0%
GAATGAGGATATGCAACTTC+TGG - chr4_4:73294065-73294084 None:intergenic 40.0%
CATTACCATTACACTGGAGA+AGG - chr4_4:73294120-73294139 None:intergenic 40.0%
CCAATGCATTACCATTACAC+TGG - chr4_4:73294126-73294145 None:intergenic 40.0%
! CCAGTGTAATGGTAATGCAT+TGG + chr4_4:73294123-73294142 Msa0701840:intron 40.0%
CTTATTACGCGGTTTCACAT+TGG - chr4_4:73294445-73294464 None:intergenic 40.0%
TGAAACCGCGTAATAAGCTA+GGG + chr4_4:73294448-73294467 Msa0701840:intron 40.0%
! TCCGGGATGTTTCATTCTTT+TGG + chr4_4:73294523-73294542 Msa0701840:intron 40.0%
!! TTCTTTTGGATTGGGTGATG+TGG + chr4_4:73294537-73294556 Msa0701840:intron 40.0%
!! TCTTTTGGATTGGGTGATGT+GGG + chr4_4:73294538-73294557 Msa0701840:intron 40.0%
CTGTCGTGTGGTAATAACAT+AGG + chr4_4:73294687-73294706 Msa0701840:intron 40.0%
TTCAACGGTTCAAACACCAA+GGG + chr4_4:73294832-73294851 Msa0701840:CDS 40.0%
ATTGCTTGTGTAACAGGGAA+GGG - chr4_4:73294875-73294894 None:intergenic 40.0%
GCCTGCAAAATATAGCAACA+TGG + chr4_4:73294895-73294914 Msa0701840:CDS 40.0%
! GCCATGTTGCTATATTTTGC+AGG - chr4_4:73294899-73294918 None:intergenic 40.0%
AGCAACATGGCTTCTTCAAT+TGG + chr4_4:73294908-73294927 Msa0701840:CDS 40.0%
AACATGGCTTCTTCAATTGG+TGG + chr4_4:73294911-73294930 Msa0701840:CDS 40.0%
TTCCACGATAAACATGTCAG+AGG + chr4_4:73294934-73294953 Msa0701840:CDS 40.0%
TACCTCTGACATGTTTATCG+TGG - chr4_4:73294939-73294958 None:intergenic 40.0%
CACTGAGCTACACAAAATCT+AGG - chr4_4:73295188-73295207 None:intergenic 40.0%
! GATTTTGTGTAGCTCAGTGT+TGG + chr4_4:73295189-73295208 Msa0701840:intron 40.0%
TGATGCACAAATACGATACG+GGG + chr4_4:73295232-73295251 Msa0701840:intron 40.0%
AAAAGTTTCATTTCCCCTGG+AGG - chr4_4:73295570-73295589 None:intergenic 40.0%
GGGAAATGAAACTCGATATG+AGG + chr4_4:73295597-73295616 Msa0701840:intron 40.0%
AAATGACGAACGAAAGCTGA+AGG + chr4_4:73295620-73295639 Msa0701840:intron 40.0%
TGGCGTACCCTTAAAAAAAG+GGG - chr4_4:73295972-73295991 None:intergenic 40.0%
!!! GATTTTATTGGTTCAGGGAG+AGG + chr4_4:73296064-73296083 Msa0701840:intron 40.0%
TTGTCAAGATGCAGGCTTTA+AGG + chr4_4:73296123-73296142 Msa0701840:intron 40.0%
! TGTCAAGATGCAGGCTTTAA+GGG + chr4_4:73296124-73296143 Msa0701840:intron 40.0%
!! TGTTGATTAGGTTGAGCTTG+AGG - chr4_4:73296167-73296186 None:intergenic 40.0%
! CCAGGCAAAGATTGTTGATT+AGG - chr4_4:73296179-73296198 None:intergenic 40.0%
CCTAATCAACAATCTTTGCC+TGG + chr4_4:73296176-73296195 Msa0701840:CDS 40.0%
CTTCCAAAACCATATCCAGA+TGG - chr4_4:73296443-73296462 None:intergenic 40.0%
TTCAAAGGATAGTTTCCACC+AGG - chr4_4:73296479-73296498 None:intergenic 40.0%
TCCAATGGTTGTACTAGTAG+GGG - chr4_4:73296513-73296532 None:intergenic 40.0%
CGTGATAAACTCCCAGTATA+AGG + chr4_4:73296541-73296560 Msa0701840:CDS 40.0%
CCCGTCTGTTTACATTACAA+TGG - chr4_4:73296703-73296722 None:intergenic 40.0%
! TTTCTTTTCCTAACCACCAC+TGG - chr4_4:73296796-73296815 None:intergenic 40.0%
AACAATCCTATGTGGGTTCA+AGG + chr4_4:73296901-73296920 Msa0701840:CDS 40.0%
ACAATCCTATGTGGGTTCAA+GGG + chr4_4:73296902-73296921 Msa0701840:CDS 40.0%
CAGAATCAACAACAACAACC+AGG + chr4_4:73296979-73296998 Msa0701840:CDS 40.0%
! AAATTATTAGGGTACCCGTG+CGG - chr4_4:73297048-73297067 None:intergenic 40.0%
! GAGAAATTCCACTCTGAGAA+TGG - chr4_4:73297074-73297093 None:intergenic 40.0%
! AATTGTTGTTGGGACTGCTT+AGG - chr4_4:73297156-73297175 None:intergenic 40.0%
TACTAATCCTAATCACCTCC+CGG + chr4_4:73297189-73297208 Msa0701840:exon 40.0%
TTAAAAACCGGGAGGTGATT+AGG - chr4_4:73297199-73297218 None:intergenic 40.0%
! TAATCACCTCCCGGTTTTTA+AGG + chr4_4:73297198-73297217 Msa0701840:three_prime_UTR 40.0%
! AATCACCTCCCGGTTTTTAA+GGG + chr4_4:73297199-73297218 Msa0701840:three_prime_UTR 40.0%
CATCAAGACCCTTAAAAACC+GGG - chr4_4:73297210-73297229 None:intergenic 40.0%
ATACAACTACTGTCACATGG+GGG - chr4_4:73297334-73297353 None:intergenic 40.0%
TCCGTGTTCTGTCTCATATA+TGG + chr4_4:73297474-73297493 Msa0701840:three_prime_UTR 40.0%
GCCATATATGAGACAGAACA+CGG - chr4_4:73297478-73297497 None:intergenic 40.0%
TAAGGATGAGCGGCAAAGTA+GGG + chr4_4:73290915-73290934 Msa0701840:exon 45.0%
GGTACATCATCATCGTTGTC+GGG + chr4_4:73290947-73290966 Msa0701840:CDS 45.0%
ATCATCGTTGTCGGGTATAC+CGG + chr4_4:73290955-73290974 Msa0701840:CDS 45.0%
GTGGCATAGATCTCGTTATC+AGG - chr4_4:73291031-73291050 None:intergenic 45.0%
GACGACTAACAGCTTCGTTA+GGG - chr4_4:73291075-73291094 None:intergenic 45.0%
AGACGACTAACAGCTTCGTT+AGG - chr4_4:73291076-73291095 None:intergenic 45.0%
TAATTACTCCCTCGTGACCT+TGG - chr4_4:73291368-73291387 None:intergenic 45.0%
TATAATATACCGAGTCGCGG+CGG + chr4_4:73291386-73291405 Msa0701840:CDS 45.0%
TAAACACGGGTTTACTCTGC+TGG - chr4_4:73291758-73291777 None:intergenic 45.0%
GAAAATGGAACGCCTGCTTA+TGG + chr4_4:73291783-73291802 Msa0701840:CDS 45.0%
ACTAGATGCATAAGACGTGG+AGG - chr4_4:73291814-73291833 None:intergenic 45.0%
CACACTAGATGCATAAGACG+TGG - chr4_4:73291817-73291836 None:intergenic 45.0%
GGTTCCAATGTATCTCGCTA+TGG + chr4_4:73292186-73292205 Msa0701840:intron 45.0%
GATGCCATAGCGAGATACAT+TGG - chr4_4:73292193-73292212 None:intergenic 45.0%
! GATTCTGTTGGTGTCCATGA+CGG + chr4_4:73292384-73292403 Msa0701840:CDS 45.0%
ATGATGAAGACAGTCCGTCA+TGG - chr4_4:73292401-73292420 None:intergenic 45.0%
!! ATGGTGGATTGCAATCTGCA+TGG + chr4_4:73292427-73292446 Msa0701840:CDS 45.0%
TGGATTGCAATCTGCATGGT+CGG + chr4_4:73292431-73292450 Msa0701840:CDS 45.0%
CTGACATTGTCAAGATGGGT+AGG + chr4_4:73292478-73292497 Msa0701840:CDS 45.0%
GTGGACAGAAGATTTAGGCA+CGG - chr4_4:73292520-73292539 None:intergenic 45.0%
CCACTGTGGACAGAAGATTT+AGG - chr4_4:73292525-73292544 None:intergenic 45.0%
CCTAAATCTTCTGTCCACAG+TGG + chr4_4:73292522-73292541 Msa0701840:CDS 45.0%
CATTCTGATGATTCCCACTG+TGG - chr4_4:73292539-73292558 None:intergenic 45.0%
GCATCAACAACAACTGTTGG+TGG - chr4_4:73292717-73292736 None:intergenic 45.0%
TGGGCATCAACAACAACTGT+TGG - chr4_4:73292720-73292739 None:intergenic 45.0%
AGCTGAAGACAGTTCTGTTG+AGG + chr4_4:73292821-73292840 Msa0701840:CDS 45.0%
GAAGCAGATCCAACATCAAC+AGG - chr4_4:73292855-73292874 None:intergenic 45.0%
GATAATCCAGGAACTGCTTC+TGG + chr4_4:73292900-73292919 Msa0701840:CDS 45.0%
TCATATCCAGAAGCAGTTCC+TGG - chr4_4:73292909-73292928 None:intergenic 45.0%
CAAAAGGATGTCGATGAGAC+TGG - chr4_4:73292962-73292981 None:intergenic 45.0%
! CGCCAGATTGACTCAACAAA+TGG - chr4_4:73293234-73293253 None:intergenic 45.0%
ACATCAGAATTGTCCTCCTC+TGG - chr4_4:73293563-73293582 None:intergenic 45.0%
!! ACTCTGGAGTATGGAGTTGT+AGG - chr4_4:73293601-73293620 None:intergenic 45.0%
GCCCTTACAAAGTAACTTGG+AGG + chr4_4:73293697-73293716 Msa0701840:CDS 45.0%
AGTAACTTGGAGGAGACTTC+TGG + chr4_4:73293707-73293726 Msa0701840:CDS 45.0%
AACCACATACTTGGCATCTG+AGG - chr4_4:73293759-73293778 None:intergenic 45.0%
TGCTCATCCCCATAATAGTC+GGG - chr4_4:73293861-73293880 None:intergenic 45.0%
GTGGGATATATTGCCATCTG+AGG - chr4_4:73293895-73293914 None:intergenic 45.0%
AGCATCCACACCAGTTATGT+GGG - chr4_4:73293913-73293932 None:intergenic 45.0%
TAGCATCCACACCAGTTATG+TGG - chr4_4:73293914-73293933 None:intergenic 45.0%
ACATAACTGGTGTGGATGCT+AGG + chr4_4:73293913-73293932 Msa0701840:CDS 45.0%
!! GGTTCAGACTTTAAAGCCTC+TGG - chr4_4:73293966-73293985 None:intergenic 45.0%
! TGTGAGCTTGCTTGTGAATG+AGG - chr4_4:73294080-73294099 None:intergenic 45.0%
TTACACTGGAGAAGGGAGAT+AGG - chr4_4:73294112-73294131 None:intergenic 45.0%
ATCTCCCTTCTCCAGTGTAA+TGG + chr4_4:73294112-73294131 Msa0701840:CDS 45.0%
GTGAAACCGCGTAATAAGCT+AGG + chr4_4:73294447-73294466 Msa0701840:intron 45.0%
GAAACCGCGTAATAAGCTAG+GGG + chr4_4:73294449-73294468 Msa0701840:intron 45.0%
TTCTTTGCCCAATGCTCTGT+TGG + chr4_4:73294808-73294827 Msa0701840:CDS 45.0%
! GTTGAAGCCAACAGAGCATT+GGG - chr4_4:73294818-73294837 None:intergenic 45.0%
!! CAATGCTCTGTTGGCTTCAA+CGG + chr4_4:73294817-73294836 Msa0701840:CDS 45.0%
CTTCAACGGTTCAAACACCA+AGG + chr4_4:73294831-73294850 Msa0701840:CDS 45.0%
TAACAGGGAAGGGTGAGTAT+GGG - chr4_4:73294865-73294884 None:intergenic 45.0%
CATTGCTTGTGTAACAGGGA+AGG - chr4_4:73294876-73294895 None:intergenic 45.0%
! CAGGCATTGCTTGTGTAACA+GGG - chr4_4:73294880-73294899 None:intergenic 45.0%
CAGTTACACGCCGATAATTC+TGG + chr4_4:73295105-73295124 Msa0701840:intron 45.0%
AATGACAACCACATCCGCTA+AGG + chr4_4:73295147-73295166 Msa0701840:intron 45.0%
ATGACAACCACATCCGCTAA+GGG + chr4_4:73295148-73295167 Msa0701840:intron 45.0%
ACGAAAGCTGAAGGATAGAG+TGG + chr4_4:73295629-73295648 Msa0701840:intron 45.0%
AAGGAATGTTCTTAGAGGGG+AGG + chr4_4:73295887-73295906 Msa0701840:intron 45.0%
TGTTCTTAGAGGGGAGGTTA+TGG + chr4_4:73295893-73295912 Msa0701840:intron 45.0%
GGCGTACCCTTAAAAAAAGG+GGG - chr4_4:73295971-73295990 None:intergenic 45.0%
!! GTATAGCTCTGAGGCATGAA+CGG - chr4_4:73296293-73296312 None:intergenic 45.0%
GAGCTATACCTACATGCCAT+CGG + chr4_4:73296304-73296323 Msa0701840:CDS 45.0%
GCTGCTATACCATCTGGATA+TGG + chr4_4:73296431-73296450 Msa0701840:CDS 45.0%
ATAGTTTCCACCAGGAATGC+TGG - chr4_4:73296471-73296490 None:intergenic 45.0%
!! TAAACAGACGGGTTGACATG+TGG + chr4_4:73296711-73296730 Msa0701840:intron 45.0%
!! CTTTTTGGCAAGGAGATGCA+AGG + chr4_4:73296770-73296789 Msa0701840:intron 45.0%
ACTGACATTGTTCGAGAACC+AGG - chr4_4:73296928-73296947 None:intergenic 45.0%
TGGAAGCTGTAATACGTGCT+GGG - chr4_4:73296955-73296974 None:intergenic 45.0%
AGCACGTATTACAGCTTCCA+GGG + chr4_4:73296955-73296974 Msa0701840:CDS 45.0%
!! GTTGTTGTTGATTCTGTCCC+TGG - chr4_4:73296975-73296994 None:intergenic 45.0%
AGCAGTCCCAACAACAATTG+TGG + chr4_4:73297157-73297176 Msa0701840:CDS 45.0%
!!! TTTTTTTTTTTTTTTATTAC+TGG + chr4_4:73290532-73290551 Msa0701840:five_prime_UTR 5.0%
!!! TATAAATAGTTTTAATATAA+CGG + chr4_4:73295017-73295036 Msa0701840:intron 5.0%
GTAAGGATGAGCGGCAAAGT+AGG + chr4_4:73290914-73290933 Msa0701840:exon 50.0%
AAGGATGAGCGGCAAAGTAG+GGG + chr4_4:73290916-73290935 Msa0701840:exon 50.0%
ACAACAGAACCAAGGTCACG+AGG + chr4_4:73291356-73291375 Msa0701840:CDS 50.0%
CAACAGAACCAAGGTCACGA+GGG + chr4_4:73291357-73291376 Msa0701840:CDS 50.0%
! ACTGGTAGTGACCGATATGC+TGG + chr4_4:73291422-73291441 Msa0701840:CDS 50.0%
AATGGAACGCCTGCTTATGG+AGG + chr4_4:73291786-73291805 Msa0701840:CDS 50.0%
TAAACAGGCAGCCACCATCT+TGG + chr4_4:73291850-73291869 Msa0701840:CDS 50.0%
CAGCCATTGACACTTGACCT+GGG - chr4_4:73292461-73292480 None:intergenic 50.0%
TCAGCCATTGACACTTGACC+TGG - chr4_4:73292462-73292481 None:intergenic 50.0%
AGATTTAGGCACGGATGCCT+TGG - chr4_4:73292511-73292530 None:intergenic 50.0%
!! AATGCCACTGTTTCTGGAGC+CGG + chr4_4:73293659-73293678 Msa0701840:CDS 50.0%
GTCCTCAGATGCCAAGTATG+TGG + chr4_4:73293754-73293773 Msa0701840:intron 50.0%
!! TGAACCCTCTGAAACTGCTC+AGG + chr4_4:73293980-73293999 Msa0701840:CDS 50.0%
TGGAGAAGGGAGATAGGTTC+TGG - chr4_4:73294106-73294125 None:intergenic 50.0%
CCATCCCCTAGCTTATTACG+CGG - chr4_4:73294456-73294475 None:intergenic 50.0%
CAGAGATCACAACTGTCGTG+TGG + chr4_4:73294675-73294694 Msa0701840:intron 50.0%
CGTTGAAGCCAACAGAGCAT+TGG - chr4_4:73294819-73294838 None:intergenic 50.0%
AACGGTTCAAACACCAAGGG+AGG + chr4_4:73294835-73294854 Msa0701840:CDS 50.0%
GAGTATGGGATATCCTCCCT+TGG - chr4_4:73294851-73294870 None:intergenic 50.0%
GTAACAGGGAAGGGTGAGTA+TGG - chr4_4:73294866-73294885 None:intergenic 50.0%
! GCAGGCATTGCTTGTGTAAC+AGG - chr4_4:73294881-73294900 None:intergenic 50.0%
! TTGCATTCCCTTAGCGGATG+TGG - chr4_4:73295158-73295177 None:intergenic 50.0%
TACGGGGATGCGTCGTTTAT+TGG + chr4_4:73295248-73295267 Msa0701840:intron 50.0%
ATTACCAGGATAGCACCTCC+AGG + chr4_4:73295552-73295571 Msa0701840:intron 50.0%
TTACCAGGATAGCACCTCCA+GGG + chr4_4:73295553-73295572 Msa0701840:intron 50.0%
GCTGAAGGATAGAGTGGTCT+AGG + chr4_4:73295635-73295654 Msa0701840:intron 50.0%
CAACAATCTTTGCCTGGTGC+TGG + chr4_4:73296182-73296201 Msa0701840:CDS 50.0%
TTGAGGAAGTGAAGGTCCAG+TGG - chr4_4:73296213-73296232 None:intergenic 50.0%
!! GCAAGGTGTTGAGGAAGTGA+AGG - chr4_4:73296221-73296240 None:intergenic 50.0%
AAAGGTCCCAGCTGTGAGTA+CGG - chr4_4:73296251-73296270 None:intergenic 50.0%
! GGCATGTAGGTATAGCTCTG+AGG - chr4_4:73296302-73296321 None:intergenic 50.0%
CTGAAATGCCGATGGCATGT+AGG - chr4_4:73296315-73296334 None:intergenic 50.0%
AAAGCCTGCTGAAATGCCGA+TGG - chr4_4:73296323-73296342 None:intergenic 50.0%
! GCATTTCAGCAGGCTTTTGC+TGG + chr4_4:73296326-73296345 Msa0701840:CDS 50.0%
TAGCACCTACCACCAATCTC+TGG + chr4_4:73296352-73296371 Msa0701840:CDS 50.0%
GATGGTATAGCAGCAGACTG+AGG - chr4_4:73296425-73296444 None:intergenic 50.0%
CAGTCTGCTGCTATACCATC+TGG + chr4_4:73296425-73296444 Msa0701840:CDS 50.0%
GCCCCTACTAGTACAACCAT+TGG + chr4_4:73296509-73296528 Msa0701840:CDS 50.0%
AAGCTGTAATACGTGCTGGG+AGG - chr4_4:73296952-73296971 None:intergenic 50.0%
CTGGAAGCTGTAATACGTGC+TGG - chr4_4:73296956-73296975 None:intergenic 50.0%
CAGCACGTATTACAGCTTCC+AGG + chr4_4:73296954-73296973 Msa0701840:CDS 50.0%
!! TGGCTTTGTCGAAATGCACC+TGG - chr4_4:73297000-73297019 None:intergenic 50.0%
AACATCAGCAGCAGAACCCT+AGG + chr4_4:73297097-73297116 Msa0701840:CDS 50.0%
ACATCAGCAGCAGAACCCTA+GGG + chr4_4:73297098-73297117 Msa0701840:CDS 50.0%
!! CTGCTTAGGTGGTTGGCTTT+GGG - chr4_4:73297142-73297161 None:intergenic 50.0%
!! ACTGCTTAGGTGGTTGGCTT+TGG - chr4_4:73297143-73297162 None:intergenic 50.0%
TGTTGTTGGGACTGCTTAGG+TGG - chr4_4:73297153-73297172 None:intergenic 50.0%
CAAGACCCTTAAAAACCGGG+AGG - chr4_4:73297207-73297226 None:intergenic 50.0%
! TGGGAACGCCTCGTATTGAT+TGG - chr4_4:73297255-73297274 None:intergenic 50.0%
! ATCAATACGAGGCGTTCCCA+CGG + chr4_4:73297255-73297274 Msa0701840:three_prime_UTR 50.0%
GGTCTCTTCGGACCAAACAA+TGG - chr4_4:73297297-73297316 None:intergenic 50.0%
TGGTCCGAAGAGACCCAATA+TGG + chr4_4:73297302-73297321 Msa0701840:three_prime_UTR 50.0%
GAACCCTAACTCGAGGGGAT+CGG + chr4_4:73290890-73290909 Msa0701840:five_prime_UTR 55.0%
ACTCCGATCCCCTCGAGTTA+GGG - chr4_4:73290896-73290915 None:intergenic 55.0%
TACTCCGATCCCCTCGAGTT+AGG - chr4_4:73290897-73290916 None:intergenic 55.0%
AACTCGAGGGGATCGGAGTA+AGG + chr4_4:73290897-73290916 Msa0701840:five_prime_UTR 55.0%
GGGATCGGAGTAAGGATGAG+CGG + chr4_4:73290905-73290924 Msa0701840:exon 55.0%
AGGATGAGCGGCAAAGTAGG+GGG + chr4_4:73290917-73290936 Msa0701840:exon 55.0%
GGCAAAGTAGGGGGACAGAA+AGG + chr4_4:73290926-73290945 Msa0701840:CDS 55.0%
ATCGTTGTCGGGTATACCGG+CGG + chr4_4:73290958-73290977 Msa0701840:CDS 55.0%
GTAGTGACCGATATGCTGGC+CGG + chr4_4:73291426-73291445 Msa0701840:CDS 55.0%
TAGTGACCGATATGCTGGCC+GGG + chr4_4:73291427-73291446 Msa0701840:CDS 55.0%
GAGCCCAGGTCAAGTGTCAA+TGG + chr4_4:73292455-73292474 Msa0701840:CDS 55.0%
TGTCAAGATGGGTAGGCCAC+AGG + chr4_4:73292485-73292504 Msa0701840:CDS 55.0%
AAGTTGTGATGCGAGGCTGC+TGG - chr4_4:73292573-73292592 None:intergenic 55.0%
! GTTGGTGGGTGCTCAACAGA+AGG - chr4_4:73292702-73292721 None:intergenic 55.0%
TGAGCAAGGGACAGAACCAG+AGG + chr4_4:73293544-73293563 Msa0701840:CDS 55.0%
!! ATGCCACTGTTTCTGGAGCC+GGG + chr4_4:73293660-73293679 Msa0701840:CDS 55.0%
GAGCCGGGACACATTCATCT+AGG + chr4_4:73293675-73293694 Msa0701840:CDS 55.0%
GGGCCTAGATGAATGTGTCC+CGG - chr4_4:73293681-73293700 None:intergenic 55.0%
CCGCGTAATAAGCTAGGGGA+TGG + chr4_4:73294453-73294472 Msa0701840:intron 55.0%
TACCAGGATAGCACCTCCAG+GGG + chr4_4:73295554-73295573 Msa0701840:intron 55.0%
!! GGATGCACAGCAAGGTGTTG+AGG - chr4_4:73296230-73296249 None:intergenic 55.0%
GTGAGTACGGATGCACAGCA+AGG - chr4_4:73296238-73296257 None:intergenic 55.0%
TGTGCATCCGTACTCACAGC+TGG + chr4_4:73296241-73296260 Msa0701840:CDS 55.0%
GTGCATCCGTACTCACAGCT+GGG + chr4_4:73296242-73296261 Msa0701840:CDS 55.0%
CATGCCATCGGCATTTCAGC+AGG + chr4_4:73296316-73296335 Msa0701840:CDS 55.0%
CTACCACCAATCTCTGGCAG+CGG + chr4_4:73296358-73296377 Msa0701840:CDS 55.0%
GGAAGTTCCACCAGCATTCC+TGG + chr4_4:73296458-73296477 Msa0701840:CDS 55.0%
AGTTCCACCAGCATTCCTGG+TGG + chr4_4:73296461-73296480 Msa0701840:CDS 55.0%
GTTTCCACCAGGAATGCTGG+TGG - chr4_4:73296468-73296487 None:intergenic 55.0%
!! GGGGCAGCTGATGGATTCAA+AGG - chr4_4:73296494-73296513 None:intergenic 55.0%
GTACTAGTAGGGGCAGCTGA+TGG - chr4_4:73296503-73296522 None:intergenic 55.0%
ATGCAAGGCCAGTGGTGGTT+AGG + chr4_4:73296785-73296804 Msa0701840:intron 55.0%
GGTGCAAAATGCTGCTGCGA+TGG - chr4_4:73297027-73297046 None:intergenic 55.0%
! CAGCAGCATTTTGCACCGCA+CGG + chr4_4:73297030-73297049 Msa0701840:CDS 55.0%
! AGCAGCATTTTGCACCGCAC+GGG + chr4_4:73297031-73297050 Msa0701840:CDS 55.0%
GTTGGGACTGCTTAGGTGGT+TGG - chr4_4:73297149-73297168 None:intergenic 55.0%
CCGGCCATATTGGGTCTCTT+CGG - chr4_4:73297309-73297328 None:intergenic 55.0%
CCGAAGAGACCCAATATGGC+CGG + chr4_4:73297306-73297325 Msa0701840:three_prime_UTR 55.0%
TGCGGCTGAACCCTAACTCG+AGG + chr4_4:73290883-73290902 Msa0701840:five_prime_UTR 60.0%
GCGGCTGAACCCTAACTCGA+GGG + chr4_4:73290884-73290903 Msa0701840:five_prime_UTR 60.0%
CGGCTGAACCCTAACTCGAG+GGG + chr4_4:73290885-73290904 Msa0701840:five_prime_UTR 60.0%
!! ACCATTTTCCGACTCGCCGC+CGG - chr4_4:73290977-73290996 None:intergenic 60.0%
AATATACCGAGTCGCGGCGG+CGG + chr4_4:73291389-73291408 Msa0701840:CDS 60.0%
AGTGACCGATATGCTGGCCG+GGG + chr4_4:73291428-73291447 Msa0701840:CDS 60.0%
GTGGAGGAGCCTCCATAAGC+AGG - chr4_4:73291798-73291817 None:intergenic 60.0%
ACAGGCAGCCACCATCTTGG+AGG + chr4_4:73291853-73291872 Msa0701840:CDS 60.0%
GCAAGGGACAGAACCAGAGG+AGG + chr4_4:73293547-73293566 Msa0701840:CDS 60.0%
TGTCCCGGCTCCAGAAACAG+TGG - chr4_4:73293666-73293685 None:intergenic 60.0%
!! TTCCCCTGGAGGTGCTATCC+TGG - chr4_4:73295559-73295578 None:intergenic 60.0%
! CGCTGCCAGAGATTGGTGGT+AGG - chr4_4:73296360-73296379 None:intergenic 60.0%
!! GAAGCACCGCTGCCAGAGAT+TGG - chr4_4:73296367-73296386 None:intergenic 60.0%
GCAAGGAGATGCAAGGCCAG+TGG + chr4_4:73296777-73296796 Msa0701840:intron 60.0%
AGGAGATGCAAGGCCAGTGG+TGG + chr4_4:73296780-73296799 Msa0701840:intron 60.0%
CCAGGCCCTTGAACCCACAT+AGG - chr4_4:73296910-73296929 None:intergenic 60.0%
CCTATGTGGGTTCAAGGGCC+TGG + chr4_4:73296907-73296926 Msa0701840:CDS 60.0%
AATGCTGCTGCGATGGCTGC+TGG - chr4_4:73297020-73297039 None:intergenic 60.0%
!! CGGCAAGGGAAGCATCCCTA+GGG - chr4_4:73297116-73297135 None:intergenic 60.0%
CCTAGGGATGCTTCCCTTGC+CGG + chr4_4:73297114-73297133 Msa0701840:CDS 60.0%
!! TTGGCTTTGGGAGCCGGCAA+GGG - chr4_4:73297130-73297149 None:intergenic 60.0%
!! AGGTGGTTGGCTTTGGGAGC+CGG - chr4_4:73297136-73297155 None:intergenic 60.0%
!! ATGGGGGCACCGGCCATATT+GGG - chr4_4:73297318-73297337 None:intergenic 60.0%
! CTACTGTCACATGGGGGCAC+CGG - chr4_4:73297328-73297347 None:intergenic 60.0%
ACCGGCGGCGAGTCGGAAAA+TGG + chr4_4:73290973-73290992 Msa0701840:CDS 65.0%
AACTTGCACCACCGCCACCC+CGG - chr4_4:73291448-73291467 None:intergenic 65.0%
GATGGGTAGGCCACAGGCCA+AGG + chr4_4:73292491-73292510 Msa0701840:CDS 65.0%
CCAGTGGCAACACCAGCACC+AGG - chr4_4:73296197-73296216 None:intergenic 65.0%
!! CCTGGTGCTGGTGTTGCCAC+TGG + chr4_4:73296194-73296213 Msa0701840:CDS 65.0%
GCACCGCTGCCAGAGATTGG+TGG - chr4_4:73296364-73296383 None:intergenic 65.0%
!! CCGGCAAGGGAAGCATCCCT+AGG - chr4_4:73297117-73297136 None:intergenic 65.0%
!! GTTGGCTTTGGGAGCCGGCA+AGG - chr4_4:73297131-73297150 None:intergenic 65.0%
!! CATGGGGGCACCGGCCATAT+TGG - chr4_4:73297319-73297338 None:intergenic 65.0%
CGGGTATACCGGCGGCGAGT+CGG + chr4_4:73290966-73290985 Msa0701840:CDS 70.0%
GACCGATATGCTGGCCGGGG+TGG + chr4_4:73291431-73291450 Msa0701840:CDS 70.0%
CGCCACCCCGGCCAGCATAT+CGG - chr4_4:73291436-73291455 None:intergenic 70.0%
CGATATGCTGGCCGGGGTGG+CGG + chr4_4:73291434-73291453 Msa0701840:CDS 70.0%
TCTGCATGGTCGGCGAGCCC+AGG + chr4_4:73292441-73292460 Msa0701840:CDS 70.0%
GGCACGGATGCCTTGGCCTG+TGG - chr4_4:73292504-73292523 None:intergenic 70.0%
ATACCGAGTCGCGGCGGCGG+CGG + chr4_4:73291392-73291411 Msa0701840:CDS 75.0%
! TATGCTGGCCGGGGTGGCGG+TGG + chr4_4:73291437-73291456 Msa0701840:CDS 75.0%
! GGCGGCGGCGGTGGTAGGAC+TGG + chr4_4:73291404-73291423 Msa0701840:CDS 80.0%
! CCACCGCCGCCGCCGCGACT+CGG - chr4_4:73291398-73291417 None:intergenic 85.0%
! GTCGCGGCGGCGGCGGTGGT+AGG + chr4_4:73291399-73291418 Msa0701840:CDS 85.0%
! CCGAGTCGCGGCGGCGGCGG+TGG + chr4_4:73291395-73291414 Msa0701840:CDS 90.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 73290478 73297610 73290478 ID=Msa0701840;Name=Msa0701840
chr4_4 mRNA 73290478 73297610 73290478 ID=Msa0701840-mRNA-1;Parent=Msa0701840;Name=Msa0701840-mRNA-1;_AED=0.03;_eAED=0.03;_QI=442|1|0.9|1|1|1|10|416|863
chr4_4 exon 73290478 73291106 73290478 ID=Msa0701840-mRNA-1:exon:22485;Parent=Msa0701840-mRNA-1
chr4_4 exon 73291201 73291244 73291201 ID=Msa0701840-mRNA-1:exon:22486;Parent=Msa0701840-mRNA-1
chr4_4 exon 73291347 73291488 73291347 ID=Msa0701840-mRNA-1:exon:22487;Parent=Msa0701840-mRNA-1
chr4_4 exon 73291745 73291874 73291745 ID=Msa0701840-mRNA-1:exon:22488;Parent=Msa0701840-mRNA-1
chr4_4 exon 73292383 73292993 73292383 ID=Msa0701840-mRNA-1:exon:22489;Parent=Msa0701840-mRNA-1
chr4_4 exon 73293486 73293768 73293486 ID=Msa0701840-mRNA-1:exon:22490;Parent=Msa0701840-mRNA-1
chr4_4 exon 73293854 73294133 73293854 ID=Msa0701840-mRNA-1:exon:22491;Parent=Msa0701840-mRNA-1
chr4_4 exon 73294797 73294955 73294797 ID=Msa0701840-mRNA-1:exon:22492;Parent=Msa0701840-mRNA-1
chr4_4 exon 73296137 73296592 73296137 ID=Msa0701840-mRNA-1:exon:22493;Parent=Msa0701840-mRNA-1
chr4_4 exon 73296895 73297610 73296895 ID=Msa0701840-mRNA-1:exon:22494;Parent=Msa0701840-mRNA-1
chr4_4 five_prime_UTR 73290478 73290919 73290478 ID=Msa0701840-mRNA-1:five_prime_utr;Parent=Msa0701840-mRNA-1
chr4_4 CDS 73290920 73291106 73290920 ID=Msa0701840-mRNA-1:cds;Parent=Msa0701840-mRNA-1
chr4_4 CDS 73291201 73291244 73291201 ID=Msa0701840-mRNA-1:cds;Parent=Msa0701840-mRNA-1
chr4_4 CDS 73291347 73291488 73291347 ID=Msa0701840-mRNA-1:cds;Parent=Msa0701840-mRNA-1
chr4_4 CDS 73291745 73291874 73291745 ID=Msa0701840-mRNA-1:cds;Parent=Msa0701840-mRNA-1
chr4_4 CDS 73292383 73292993 73292383 ID=Msa0701840-mRNA-1:cds;Parent=Msa0701840-mRNA-1
chr4_4 CDS 73293486 73293768 73293486 ID=Msa0701840-mRNA-1:cds;Parent=Msa0701840-mRNA-1
chr4_4 CDS 73293854 73294133 73293854 ID=Msa0701840-mRNA-1:cds;Parent=Msa0701840-mRNA-1
chr4_4 CDS 73294797 73294955 73294797 ID=Msa0701840-mRNA-1:cds;Parent=Msa0701840-mRNA-1
chr4_4 CDS 73296137 73296592 73296137 ID=Msa0701840-mRNA-1:cds;Parent=Msa0701840-mRNA-1
chr4_4 CDS 73296895 73297194 73296895 ID=Msa0701840-mRNA-1:cds;Parent=Msa0701840-mRNA-1
chr4_4 three_prime_UTR 73297195 73297610 73297195 ID=Msa0701840-mRNA-1:three_prime_utr;Parent=Msa0701840-mRNA-1
Gene Sequence

>Msa0701840

ATGAGCGGCAAAGTAGGGGGACAGAAAGGTACATCATCATCGTTGTCGGGTATACCGGCGGCGAGTCGGAAAATGGTACAAAGCTTGAAAGAGATAGTTTCGAATATACCTGATAACGAGATCTATGCCACTCTCAAAGACTGTAACATGGACCCTAACGAAGCTGTTAGTCGTCTTCTTTCTCAAGATCCTTTTCATGAGGTTAAGAGCAAACGAGAAAAGAAAAAAGAGGGTAAGGATACAACAGAACCAAGGTCACGAGGGAGTAATTATAATATACCGAGTCGCGGCGGCGGCGGTGGTAGGACTGGTAGTGACCGATATGCTGGCCGGGGTGGCGGTGGTGCAAGTTCGAACCAATTCAGTAATAATGACTATGGTGTCCAGCAGAGTAAACCCGTGTTTAAGAAAGAAAATGGAACGCCTGCTTATGGAGGCTCCTCCACGTCTTATGCATCTAGTGTGATGGACAATAATGTAAACAGGCAGCCACCATCTTGGAGTGATTCTGTTGGTGTCCATGACGGACTGTCTTCATCATCACATCATGGTGGATTGCAATCTGCATGGTCGGCGAGCCCAGGTCAAGTGTCAATGGCTGACATTGTCAAGATGGGTAGGCCACAGGCCAAGGCATCCGTGCCTAAATCTTCTGTCCACAGTGGGAATCATCAGAATGCTTTTTCAACTCCAGCAGCCTCGCATCACAACTTGAATGTTACTGAAGCAAATAATGAATGGCCTTCTATTGAACCCAATGTTCAACAGAGTGATGAATGGCCTTCTATTGACCCCAATGTTCAACAGAGTGATGAATGGCCTTCTGTTGAGCACCCACCAACAGTTGTTGTTGATGCCCATCCAAATTCTGAGTATTATACAAATACATCTAACTTGGGTGAAGCTAATAGACAACTGCAGAACCACGGAAATGAATTTGTAGCTGAAGACAGTTCTGTTGAGGATGAGAATCCTGTTGATGTTGGATCTGCTTCTATACCTGCTAAAATTATATCTGATGATAATCCAGGAACTGCTTCTGGATATGATGATAATTTGTACAAGGACATAAATTCTTACCAGTCTCATCGACATCCTTTTGATGACAACGAAGCTGAAAATGGTGTTTCATCAGTGGCTACAAACTTAGAGCAGCTAAATTTACACACAGATGAGCAAGGGACAGAACCAGAGGAGGACAATTCTGATGTACTTATTCCAAATCACCTACAACTCCATACTCCAGAGTGTTTTAGTCTGAGCTTTGGAAGTTTTGGACCAAAACAAAATGCCACTGTTTCTGGAGCCGGGACACATTCATCTAGGCCCTTACAAAGTAACTTGGAGGAGACTTCTGGAGCTACTGATGTTTCAGCAATTGGGTCCTCAGATGCCAAAAATCCCGACTATTATGGGGATGAGCATATTGCTACTACCTCAGATGGCAATATATCCCACATAACTGGTGTGGATGCTAGGACTTATGAACATTCTTCCATTTCACAACCAGAGGCTTTAAAGTCTGAACCCTCTGAAACTGCTCAGGAAAATCAATATTCATTTCCTTCATCTTCGCATGAGTTTACATATGAAAATGCCCAACAACCAGAAGTTGCATATCCTCATTCACAAGCAAGCTCACAGATCCAGAACCTATCTCCCTTCTCCAGTGTAATGGCATATACAAATTCTTTGCCCAATGCTCTGTTGGCTTCAACGGTTCAAACACCAAGGGAGGATATCCCATACTCACCCTTCCCTGTTACACAAGCAATGCCTGCAAAATATAGCAACATGGCTTCTTCAATTGGTGGTTCCACGATAAACATGTCAGAGGCTTTAAGGGCAAACAGCATTTCGACGCCTCAAGCTCAACCTAATCAACAATCTTTGCCTGGTGCTGGTGTTGCCACTGGACCTTCACTTCCTCAACACCTTGCTGTGCATCCGTACTCACAGCTGGGACCTTTTGCTAATATGATAAGTTATCCGTTCATGCCTCAGAGCTATACCTACATGCCATCGGCATTTCAGCAGGCTTTTGCTGGAAATAGCACCTACCACCAATCTCTGGCAGCGGTGCTTCCACAATATAAAAATAGCATTTCTGTCAGCAGCTTGCCTCAGTCTGCTGCTATACCATCTGGATATGGTTTTGGAAGTTCCACCAGCATTCCTGGTGGAAACTATCCTTTGAATCCATCAGCTGCCCCTACTAGTACAACCATTGGATATGATGACGTGATAAACTCCCAGTATAAGGATAACAATCATATGATTTCACTTCAGCAGAATGAGAACAATCCTATGTGGGTTCAAGGGCCTGGTTCTCGAACAATGTCAGTTCCTCCCAGCACGTATTACAGCTTCCAGGGACAGAATCAACAACAACAACCAGGTGCATTTCGACAAAGCCAGCAGCCATCGCAGCAGCATTTTGCACCGCACGGGTACCCTAATAATTTCTACCATTCTCAGAGTGGAATTTCTCTAGAACATCAGCAGCAGAACCCTAGGGATGCTTCCCTTGCCGGCTCCCAAAGCCAACCACCTAAGCAGTCCCAACAACAATTGTGGCAAAACAGCTACTAA
Protein sequence

>Msa0701840

MSGKVGGQKGTSSSLSGIPAASRKMVQSLKEIVSNIPDNEIYATLKDCNMDPNEAVSRLLSQDPFHEVKSKREKKKEGKDTTEPRSRGSNYNIPSRGGGGGRTGSDRYAGRGGGGASSNQFSNNDYGVQQSKPVFKKENGTPAYGGSSTSYASSVMDNNVNRQPPSWSDSVGVHDGLSSSSHHGGLQSAWSASPGQVSMADIVKMGRPQAKASVPKSSVHSGNHQNAFSTPAASHHNLNVTEANNEWPSIEPNVQQSDEWPSIDPNVQQSDEWPSVEHPPTVVVDAHPNSEYYTNTSNLGEANRQLQNHGNEFVAEDSSVEDENPVDVGSASIPAKIISDDNPGTASGYDDNLYKDINSYQSHRHPFDDNEAENGVSSVATNLEQLNLHTDEQGTEPEEDNSDVLIPNHLQLHTPECFSLSFGSFGPKQNATVSGAGTHSSRPLQSNLEETSGATDVSAIGSSDAKNPDYYGDEHIATTSDGNISHITGVDARTYEHSSISQPEALKSEPSETAQENQYSFPSSSHEFTYENAQQPEVAYPHSQASSQIQNLSPFSSVMAYTNSLPNALLASTVQTPREDIPYSPFPVTQAMPAKYSNMASSIGGSTINMSEALRANSISTPQAQPNQQSLPGAGVATGPSLPQHLAVHPYSQLGPFANMISYPFMPQSYTYMPSAFQQAFAGNSTYHQSLAAVLPQYKNSISVSSLPQSAAIPSGYGFGSSTSIPGGNYPLNPSAAPTSTTIGYDDVINSQYKDNNHMISLQQNENNPMWVQGPGSRTMSVPPSTYYSFQGQNQQQQPGAFRQSQQPSQQHFAPHGYPNNFYHSQSGISLEHQQQNPRDASLAGSQSQPPKQSQQQLWQNSY*