AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0993820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0993820 MtrunA17_Chr6g0473021 99.105 894 6 2 1 892 1 894 0.0 1781
Msa0993820 MtrunA17_Chr3g0125831 37.479 587 288 18 317 848 323 885 1.49e-100 333
Msa0993820 MtrunA17_Chr1g0159441 51.579 285 132 4 306 590 322 600 3.05e-98 328
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0993820 AT5G62090.1 51.329 602 212 18 304 891 281 815 3.26e-178 536
Msa0993820 AT5G62090.2 51.329 602 212 18 304 891 281 815 3.26e-178 536
Msa0993820 AT5G62090.3 51.329 602 212 18 304 891 281 815 3.26e-178 536
Msa0993820 AT4G25515.1 46.851 794 303 18 95 882 1 681 5.89e-178 530
Msa0993820 AT4G25520.1 45.765 850 302 24 75 881 9 742 1.61e-177 531
Msa0993820 AT4G25520.2 45.765 850 302 24 75 881 9 742 1.61e-177 531
Msa0993820 AT1G43850.2 54.647 269 116 4 317 585 304 566 3.50e-94 316
Msa0993820 AT1G43850.1 54.647 269 116 4 317 585 304 566 3.50e-94 316

Find 246 sgRNAs with CRISPR-Local

Find 406 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCAACCTTGGTCCGGTTTC+TGG 0.004417 6_4:+67185454 Msa0993820:CDS
GTAACTGTGGATTACGATTT+TGG 0.087200 6_4:-67186002 None:intergenic
TCAAACAATATTAGTATTTC+TGG 0.136306 6_4:+67185652 Msa0993820:CDS
AGCAGGTGGGATATATTATT+TGG 0.184102 6_4:-67185889 None:intergenic
GAATATGGCAAAGAATAATT+TGG 0.196446 6_4:+67189784 Msa0993820:CDS
CAAAGAAGTGCAAGCATTAA+TGG 0.207098 6_4:+67185586 Msa0993820:CDS
AAGAAGCTGGTGAGGGATTC+TGG 0.224369 6_4:-67189466 None:intergenic
GCAAAGAATAATTTGGGTTT+TGG 0.226566 6_4:+67189791 Msa0993820:CDS
ACTCAACTTGTCAGTGTAAT+TGG 0.226766 6_4:+67190094 Msa0993820:three_prime_UTR
CTCCATTTGTGGTTGGAGTT+TGG 0.238832 6_4:-67189817 None:intergenic
CATCAGAAGATTCTGGTAAT+TGG 0.243250 6_4:-67189375 None:intergenic
AGACTTAACGTAGTCAAATT+TGG 0.255462 6_4:+67187295 Msa0993820:CDS
CCAGCTTCTTTGCAAGGTGC+TGG 0.274078 6_4:+67189479 Msa0993820:CDS
TTTGAGCAACCTGAACTAAT+TGG 0.280593 6_4:-67188176 None:intergenic
TGCAAAAGGGTCCTGACTGC+TGG 0.282814 6_4:+67188652 Msa0993820:intron
CCAACCTTGGTCCGGTTTCT+GGG 0.289752 6_4:+67185455 Msa0993820:CDS
CATAAGCAGTAATCACAATA+TGG 0.296648 6_4:+67189304 Msa0993820:CDS
CTCAATTTGTCTATTGTTTG+AGG 0.306265 6_4:+67185205 Msa0993820:five_prime_UTR
TTTGCCTCATCAGAAGATTC+TGG 0.314520 6_4:-67189382 None:intergenic
CAGCTTCTTTGCAAGGTGCT+GGG 0.325798 6_4:+67189480 Msa0993820:CDS
GCCAATGGTCAAGGAAATAA+TGG 0.328082 6_4:+67189848 Msa0993820:CDS
AAGATTTGTTAGAACTTTGC+AGG 0.331751 6_4:+67188732 Msa0993820:CDS
AATATGGCAAAGAATAATTT+GGG 0.333666 6_4:+67189785 Msa0993820:CDS
GGCAATCGTGGTGCTTTGAC+TGG 0.346085 6_4:+67189326 Msa0993820:CDS
CGCTTTCTTTAACAGTGATC+TGG 0.346150 6_4:+67190036 Msa0993820:CDS
TACTAGTAGATTACACTTGC+AGG 0.347743 6_4:-67190296 None:intergenic
CGTGAAGTAAGATTTCCTTC+TGG 0.348949 6_4:+67187358 Msa0993820:CDS
TCATCTGCTGTTGCAGTGAT+TGG 0.350351 6_4:-67189682 None:intergenic
AAATTTGACTACGTTAAGTC+TGG 0.354883 6_4:-67187293 None:intergenic
GTGAAGTAAGATTTCCTTCT+GGG 0.355713 6_4:+67187359 Msa0993820:CDS
AAAATCTCTAAAGCACCTAT+TGG 0.356672 6_4:-67190250 None:intergenic
TACCTCCCATGGCACCTTCT+CGG 0.358757 6_4:+67185293 Msa0993820:exon
GAAACTGCATTCGCTGAGCC+TGG 0.360815 6_4:-67186113 None:intergenic
GCTCAATCATCATCAAGTTC+TGG 0.361407 6_4:+67185331 Msa0993820:CDS
ACATATCCTGCAGTAGTTGC+TGG 0.363947 6_4:-67189706 None:intergenic
TTTGGAAATCTTAGAGAAAG+AGG 0.365537 6_4:+67185161 Msa0993820:five_prime_UTR
ACCCAATGTAAGTGGGAATA+TGG 0.366855 6_4:+67189769 Msa0993820:CDS
AAATCTGGAAGAAGGGGATT+TGG 0.370643 6_4:+67187145 Msa0993820:CDS
GACATATGCGGAACTAAATC+TGG 0.370733 6_4:+67187130 Msa0993820:CDS
AAATCGTAATCCACAGTTAC+AGG 0.371291 6_4:+67186005 Msa0993820:CDS
GCAGGTTTGTCGGTGAAGTT+TGG 0.376597 6_4:+67185143 Msa0993820:five_prime_UTR
TGCTTGCACTTCTTTGCATA+TGG 0.377246 6_4:-67185579 None:intergenic
CACACACTCTTGAACTGCTT+TGG 0.381564 6_4:-67187401 None:intergenic
GGCAGAGCCTCCTCCATTTG+TGG 0.385110 6_4:-67189828 None:intergenic
ACAGGTCAACCAATTAGTTC+AGG 0.385319 6_4:+67188167 Msa0993820:intron
GCCATATTCCCACTTACATT+GGG 0.386693 6_4:-67189770 None:intergenic
GCGTCAGCTTGCGAAGAGTT+TGG 0.390189 6_4:+67188675 Msa0993820:CDS
ACCTCCCATGGCACCTTCTC+GGG 0.391943 6_4:+67185294 Msa0993820:exon
GCTGCTGTAGTGAGGGTAGA+TGG 0.399221 6_4:-67189568 None:intergenic
GATGAGCCAGCTTGAGAAGC+AGG 0.407901 6_4:-67185793 None:intergenic
CAGGCACTTGTGCACCCGTT+TGG 0.413768 6_4:-67185822 None:intergenic
TTGAGTCAGTCATGGCTTCC+AGG 0.414836 6_4:-67190077 None:intergenic
AAACTGTTACTCCTTGAAAC+AGG 0.415397 6_4:-67189872 None:intergenic
AAAGCGCTGTCTGTGAAGTC+AGG 0.416020 6_4:-67190019 None:intergenic
TGCCATATTCCCACTTACAT+TGG 0.423079 6_4:-67189771 None:intergenic
ACCTCAACAAAATCACTCTC+AGG 0.424286 6_4:+67189646 Msa0993820:CDS
GGCCAAACTCCAACCACAAA+TGG 0.432260 6_4:+67189815 Msa0993820:CDS
CACTTAATGAGCGCTGTTGA+AGG 0.436350 6_4:-67189613 None:intergenic
TTCACGGGTGCACAAGTGCC+TGG 0.440431 6_4:+67185850 Msa0993820:CDS
ACAGAGGAACCATCCATTGC+AGG 0.441574 6_4:-67185679 None:intergenic
TGTGAAGTCAGGGGCAAAAT+CGG 0.442003 6_4:-67190008 None:intergenic
TGAAAGATTTGTTGCTGAGC+CGG 0.442598 6_4:-67186081 None:intergenic
ATTTGTTTCTTCAGCATGCT+TGG 0.442668 6_4:+67187101 Msa0993820:intron
ATGGCACCTTCTCGGGTGGC+AGG 0.443888 6_4:+67185301 Msa0993820:CDS
CCGTATGACGGTGGTGGTGT+TGG 0.444476 6_4:+67186225 Msa0993820:CDS
GGCTCATCTTCGCACCAAAC+GGG 0.445319 6_4:+67185808 Msa0993820:CDS
AGGATAATAGTATTGCATAT+TGG 0.445753 6_4:+67186562 Msa0993820:intron
CTGCTGCCGCTGCTGTAGTG+AGG 0.446365 6_4:-67189576 None:intergenic
GTCATGACTCTTACTCCAAT+AGG 0.447795 6_4:+67190235 Msa0993820:three_prime_UTR
CTTATGTGATTGTTTGATCC+AGG 0.449065 6_4:-67189287 None:intergenic
CCTTCTCGATGAAGTGAGCC+AGG 0.450422 6_4:-67189422 None:intergenic
TGGCTCATCTTCGCACCAAA+CGG 0.451424 6_4:+67185807 Msa0993820:CDS
AGGTTGGAATGACCAGTTCC+AGG 0.452566 6_4:-67185439 None:intergenic
GACTCTTCTGCAGCAGCTGG+TGG 0.454343 6_4:+67189914 Msa0993820:CDS
CAAACAATATTAGTATTTCT+GGG 0.454378 6_4:+67185653 Msa0993820:CDS
ACGGAAGAGATATTGTTGTT+TGG 0.456283 6_4:+67190338 Msa0993820:three_prime_UTR
GAAAGATTTGTTGCTGAGCC+GGG 0.456474 6_4:-67186080 None:intergenic
TCTTCTGCAGCAGCTGGTGG+AGG 0.457790 6_4:+67189917 Msa0993820:CDS
GAGAAAGAGGAGATACAGTC+AGG 0.458752 6_4:+67185174 Msa0993820:five_prime_UTR
CTGCTGTAGTGAGGGTAGAT+GGG 0.459396 6_4:-67189567 None:intergenic
CAGTGATCTGGATGATAACA+TGG 0.459525 6_4:+67190048 Msa0993820:CDS
AGGATATGTCAAATAACAAT+GGG 0.460590 6_4:+67189720 Msa0993820:CDS
AAGCTGATGGCATTGAATCC+TGG 0.462617 6_4:+67189269 Msa0993820:CDS
CCCCTTGGTGATTGGAATCA+AGG 0.464760 6_4:-67185267 None:intergenic
CGTATTTACTCAAGACCTAA+AGG 0.464821 6_4:+67187465 Msa0993820:CDS
ATCGGAAGCAACGTCTTGTA+AGG 0.467151 6_4:-67189990 None:intergenic
TTTCTTGGGATTTCTGTGTA+AGG 0.470095 6_4:+67187578 Msa0993820:CDS
GTCGCTGTCTTTGATGATAG+AGG 0.470148 6_4:-67186278 None:intergenic
TGGTCATTCCAACCTTGGTC+CGG 0.471673 6_4:+67185447 Msa0993820:CDS
GAAATAATGGACCTGTTTCA+AGG 0.474603 6_4:+67189861 Msa0993820:CDS
CCCAGAAACCGGACCAAGGT+TGG 0.476077 6_4:-67185455 None:intergenic
GTAGATTACACTTGCAGGCC+AGG 0.476217 6_4:-67190291 None:intergenic
CAAACGGGTGCACAAGTGCC+TGG 0.476595 6_4:+67185823 Msa0993820:CDS
GATGCAAATTCTGCACTCTC+TGG 0.480557 6_4:+67185550 Msa0993820:CDS
AGCTTCTTTGCAAGGTGCTG+GGG 0.481337 6_4:+67189481 Msa0993820:CDS
TGCATATTGGAGAAAATTTG+TGG 0.481757 6_4:+67186575 Msa0993820:CDS
ACAAGTGCCTGGATCTTTCA+CGG 0.484466 6_4:+67185834 Msa0993820:CDS
TGCTGCCGCTGCTGTAGTGA+GGG 0.489285 6_4:-67189575 None:intergenic
ATAAGCAGTAATCACAATAT+GGG 0.492121 6_4:+67189305 Msa0993820:CDS
TATTTCTGGGTCACCTGCAA+TGG 0.492304 6_4:+67185666 Msa0993820:CDS
AAAACTGACCGTAGTTGCCT+GGG 0.493407 6_4:-67186682 None:intergenic
GGTGAATTCTGCATAGAGCC+TGG 0.493626 6_4:-67189515 None:intergenic
TCCATTATTTCCTTGACCAT+TGG 0.493782 6_4:-67189849 None:intergenic
CGGAACTAAATCTGGAAGAA+GGG 0.496413 6_4:+67187138 Msa0993820:CDS
TGGGCCATCACAAGCTGCTA+TGG 0.497990 6_4:+67189346 Msa0993820:CDS
TCTGCAGCAGCTGGTGGAGG+CGG 0.500960 6_4:+67189920 Msa0993820:CDS
GCTGGTGGAGGCGGCAACAA+TGG 0.501813 6_4:+67189929 Msa0993820:CDS
GGATCTTGAGTGAAAGATCC+AGG 0.501934 6_4:-67185868 None:intergenic
TCTAACACTATACCTGGAAC+TGG 0.502243 6_4:+67185427 Msa0993820:CDS
GCGGAACTAAATCTGGAAGA+AGG 0.502603 6_4:+67187137 Msa0993820:CDS
GCAGAATCAACAGAAGCTGC+AGG 0.503705 6_4:+67185747 Msa0993820:CDS
CCCTCACCAGCTTCTTTGCA+AGG 0.504492 6_4:+67189473 Msa0993820:CDS
CAGAGTACAATTTCTGAAAG+TGG 0.504850 6_4:+67188204 Msa0993820:CDS
AAAGATGCAGGAGATGGAAC+AGG 0.505007 6_4:+67189202 Msa0993820:CDS
TTCGAGGAAGAAGTTCTTCG+TGG 0.507746 6_4:-67187603 None:intergenic
GAGCCTCCTCCATTTGTGGT+TGG 0.509004 6_4:-67189824 None:intergenic
TTATTCATATCCCCAGAAAC+CGG 0.509783 6_4:-67185466 None:intergenic
GCAAAAGGGTCCTGACTGCT+GGG 0.509818 6_4:+67188653 Msa0993820:intron
CCAGCACCTTGCAAAGAAGC+TGG 0.510142 6_4:-67189479 None:intergenic
TTTCTGAAAGTGGGTCAGAT+GGG 0.511298 6_4:+67188214 Msa0993820:CDS
CATAGTGGACCCAATGTAAG+TGG 0.512009 6_4:+67189761 Msa0993820:CDS
TCTGGGTCACCTGCAATGGA+TGG 0.512455 6_4:+67185670 Msa0993820:CDS
CAAATGATGCAGCCCTCGGC+TGG 0.512950 6_4:+67186192 Msa0993820:CDS
AAACTGCATTCGCTGAGCCT+GGG 0.515879 6_4:-67186112 None:intergenic
TGTGCACCCGTGAAAGATCC+AGG 0.516894 6_4:-67185841 None:intergenic
AATTATTTAGACTCAAAAGA+AGG 0.517001 6_4:+67190388 Msa0993820:three_prime_UTR
GTAAATGACAAGGGTGAGGC+GGG 0.517125 6_4:-67185628 None:intergenic
AGTGACTCTTCTGCAGCAGC+TGG 0.518460 6_4:+67189911 Msa0993820:CDS
GATCACAACGTTGGAGCACT+TGG 0.519657 6_4:+67188926 Msa0993820:CDS
TCGAAAGTTAGTTGCACCAC+AGG 0.521019 6_4:+67187621 Msa0993820:CDS
GCGACATATCAGATGTCCTC+TGG 0.526090 6_4:-67189958 None:intergenic
CAAGGTAGCTATCGTAAGCC+AGG 0.529043 6_4:-67185249 None:intergenic
TTCTGGTTTGAGTTACTGAA+AGG 0.529945 6_4:-67189449 None:intergenic
ATTTCTGAAAGTGGGTCAGA+TGG 0.531570 6_4:+67188213 Msa0993820:CDS
GATGATCCAGCAACTACTGC+AGG 0.531746 6_4:+67189700 Msa0993820:CDS
TGTGGTGCAACTAACTTTCG+AGG 0.533250 6_4:-67187619 None:intergenic
AATCTTTCAGTCGTTGCCCC+CGG 0.533553 6_4:+67186062 Msa0993820:CDS
GCAAACTCAGCGCCAAGTGT+TGG 0.535607 6_4:+67185508 Msa0993820:CDS
AACTCAATGAATTCAAGCCC+TGG 0.537180 6_4:+67189404 Msa0993820:CDS
AATGCAAAAGATGCAGGAGA+TGG 0.538660 6_4:+67189196 Msa0993820:CDS
TATCTCTTCCGTGTGTTGCA+CGG 0.540165 6_4:-67190327 None:intergenic
GCTGGGGCTGCTATAATCCC+AGG 0.542056 6_4:+67189497 Msa0993820:CDS
GAGATGGAACAGGCAGCAAA+TGG 0.542386 6_4:+67189212 Msa0993820:CDS
AGCAACAACAGCAAATGCAG+AGG 0.545148 6_4:+67186154 Msa0993820:CDS
GGAACTGGTCATTCCAACCT+TGG 0.546176 6_4:+67185442 Msa0993820:CDS
TATGACGGTGGTGGTGTTGG+AGG 0.547754 6_4:+67186228 Msa0993820:CDS
GGGGTAAAACACCAGCTGAA+TGG 0.548295 6_4:-67186662 None:intergenic
GGAGGCTCTGCCAATGGTCA+AGG 0.550765 6_4:+67189839 Msa0993820:CDS
CACTTTCAGAAATTGTACTC+TGG 0.552295 6_4:-67188203 None:intergenic
AAAGATTTGTTGCTGAGCCG+GGG 0.553303 6_4:-67186079 None:intergenic
AACTCATCTAACACTATACC+TGG 0.553687 6_4:+67185421 Msa0993820:CDS
GCACCTTCTCGGGTGGCAGG+AGG 0.555371 6_4:+67185304 Msa0993820:CDS
AGATGATATAATGCAACAGC+AGG 0.555604 6_4:+67185939 Msa0993820:CDS
AAACCTCCTGCCACCCGAGA+AGG 0.557804 6_4:-67185307 None:intergenic
GCTCCAAATGCAAAAGATGC+AGG 0.558369 6_4:+67189190 Msa0993820:CDS
CAGGATATGTCAAATAACAA+TGG 0.558761 6_4:+67189719 Msa0993820:CDS
GCTACAATCACTAAATGACT+TGG 0.559114 6_4:+67188699 Msa0993820:CDS
GCCACCCGAGAAGGTGCCAT+GGG 0.559219 6_4:-67185298 None:intergenic
CTGGCTCACTTCATCGAGAA+GGG 0.559974 6_4:+67189423 Msa0993820:CDS
TGCCACCCGAGAAGGTGCCA+TGG 0.561510 6_4:-67185299 None:intergenic
CTGGTTTGAGTTACTGAAAG+GGG 0.562385 6_4:-67189447 None:intergenic
AACGTTGGACACCATTCAGC+TGG 0.563736 6_4:+67186651 Msa0993820:CDS
AAGCGCTGTCTGTGAAGTCA+GGG 0.568237 6_4:-67190018 None:intergenic
AGAGTACAATTTCTGAAAGT+GGG 0.568485 6_4:+67188205 Msa0993820:CDS
CAGCTTCGTGTTGTTCGTGA+GGG 0.569042 6_4:+67187430 Msa0993820:CDS
CCTGGCTCACTTCATCGAGA+AGG 0.569293 6_4:+67189422 Msa0993820:CDS
ACCTTGATTCCAATCACCAA+GGG 0.569360 6_4:+67185266 Msa0993820:five_prime_UTR
AACGTAGTCAAATTTGGTGG+TGG 0.570431 6_4:+67187301 Msa0993820:CDS
CAACCTTGGTCCGGTTTCTG+GGG 0.570652 6_4:+67185456 Msa0993820:CDS
TCTGGTTTGAGTTACTGAAA+GGG 0.570960 6_4:-67189448 None:intergenic
GGTGTGAAGCGTCCGTATGA+CGG 0.573196 6_4:+67186213 Msa0993820:CDS
CAAGTGCCTGGATCTTTCAC+GGG 0.575073 6_4:+67185835 Msa0993820:CDS
CCAACACCACCACCGTCATA+CGG 0.576793 6_4:-67186225 None:intergenic
ACCCGAGAAGGTGCCATGGG+AGG 0.577327 6_4:-67185295 None:intergenic
GTGAATTCTGCATAGAGCCT+GGG 0.577345 6_4:-67189514 None:intergenic
TCCCATGGCACCTTCTCGGG+TGG 0.577436 6_4:+67185297 Msa0993820:exon
GTTTCTGGGGATATGAATAA+CGG 0.578565 6_4:+67185469 Msa0993820:CDS
ACCTTGCAAAGAAGCTGGTG+AGG 0.579868 6_4:-67189474 None:intergenic
CTACAATCACTAAATGACTT+GGG 0.582087 6_4:+67188700 Msa0993820:CDS
GCAGCTTCGTGTTGTTCGTG+AGG 0.582229 6_4:+67187429 Msa0993820:CDS
GCAATCGTGGTGCTTTGACT+GGG 0.583617 6_4:+67189327 Msa0993820:CDS
CTTAACGTAGTCAAATTTGG+TGG 0.585857 6_4:+67187298 Msa0993820:CDS
AATTTGACTACGTTAAGTCT+GGG 0.586300 6_4:-67187292 None:intergenic
AAAGAACTAGCTCCAACACT+TGG 0.586342 6_4:-67185520 None:intergenic
AAACACACTTAATAAGCTGA+TGG 0.587295 6_4:+67189256 Msa0993820:CDS
GAGGTACTGCATCAATCGAC+GGG 0.588234 6_4:-67186259 None:intergenic
GAGGGCTGCATCATTTGTTG+TGG 0.588765 6_4:-67186186 None:intergenic
AACTGCATTCGCTGAGCCTG+GGG 0.596330 6_4:-67186111 None:intergenic
AATCACTCTCAGGGACCTCA+AGG 0.596816 6_4:+67189656 Msa0993820:CDS
AATGGAGGAGGCTCTGCCAA+TGG 0.596871 6_4:+67189833 Msa0993820:CDS
TTGCATTTGGAGCTTTGGTG+TGG 0.597799 6_4:-67189180 None:intergenic
TGCTGTAGTGAGGGTAGATG+GGG 0.597895 6_4:-67189566 None:intergenic
AATCTTTCAGTCATTACCCC+AGG 0.598170 6_4:+67186095 Msa0993820:CDS
CGGACGCTTCACACCAGCCG+AGG 0.600439 6_4:-67186205 None:intergenic
GGAACTAAATCTGGAAGAAG+GGG 0.603444 6_4:+67187139 Msa0993820:CDS
TGCAGTGATTGGTTTCCTTG+AGG 0.604080 6_4:-67189671 None:intergenic
AGAGGTACTGCATCAATCGA+CGG 0.605840 6_4:-67186260 None:intergenic
CCTTGCAAAGAAGCTGGTGA+GGG 0.606576 6_4:-67189473 None:intergenic
AAGCGTCCGTATGACGGTGG+TGG 0.607156 6_4:+67186219 Msa0993820:CDS
TGTAAATGACAAGGGTGAGG+CGG 0.610200 6_4:-67185629 None:intergenic
GGACGCTTCACACCAGCCGA+GGG 0.617274 6_4:-67186204 None:intergenic
ACTCTCCTCGTGCAAAGCAA+CGG 0.618878 6_4:+67186607 Msa0993820:CDS
TTCTGAAAGTGGGTCAGATG+GGG 0.619067 6_4:+67188215 Msa0993820:CDS
ACAACAAATGATGCAGCCCT+CGG 0.621479 6_4:+67186188 Msa0993820:CDS
GAACAGGCAGCAAATGGTCA+AGG 0.623367 6_4:+67189218 Msa0993820:CDS
ATTGCCATAGCAGCTTGTGA+TGG 0.623500 6_4:-67189350 None:intergenic
TACCTTGATTCCAATCACCA+AGG 0.624295 6_4:+67185265 Msa0993820:five_prime_UTR
TCACCTCACAACAGTAGTGG+TGG 0.625883 6_4:+67189533 Msa0993820:CDS
AATCACAATATGGGCAATCG+TGG 0.626493 6_4:+67189314 Msa0993820:CDS
ATTACCAGAATCTTCTGATG+AGG 0.627608 6_4:+67189378 Msa0993820:CDS
GTACAACAACAGTCTCATAG+TGG 0.628238 6_4:+67189746 Msa0993820:CDS
CTCCTCGTGCAAAGCAACGG+TGG 0.631105 6_4:+67186610 Msa0993820:CDS
TCTAACATCATCAACCCAGA+AGG 0.631328 6_4:-67187373 None:intergenic
CAGAATCAACAGAAGCTGCA+GGG 0.632025 6_4:+67185748 Msa0993820:CDS
AAGATTTGTTGCTGAGCCGG+GGG 0.632626 6_4:-67186078 None:intergenic
AGAAAGAGGAGATACAGTCA+GGG 0.633773 6_4:+67185175 Msa0993820:five_prime_UTR
CAAACTCCAACCACAAATGG+AGG 0.635025 6_4:+67189818 Msa0993820:CDS
AGGCTATGTTTCAGCAACAG+AGG 0.635240 6_4:+67186025 Msa0993820:CDS
CCTCAACAAAATCACTCTCA+GGG 0.635858 6_4:+67189647 Msa0993820:CDS
ACTCCAACCACAAATGGAGG+AGG 0.636114 6_4:+67189821 Msa0993820:CDS
TTGTTTGATGTAAATGACAA+GGG 0.642823 6_4:-67185637 None:intergenic
CTTCTCGATGAAGTGAGCCA+GGG 0.649483 6_4:-67189421 None:intergenic
CTGACAAGTTGAGTCAGTCA+TGG 0.652838 6_4:-67190085 None:intergenic
TGAAACATAGCCTGTAACTG+TGG 0.653059 6_4:-67186015 None:intergenic
AATGAGCGCTGTTGAAGGTG+TGG 0.653128 6_4:-67189608 None:intergenic
ATAGTGGACCCAATGTAAGT+GGG 0.659740 6_4:+67189762 Msa0993820:CDS
TGATGTAAATGACAAGGGTG+AGG 0.659830 6_4:-67185632 None:intergenic
AATTCACCTCACAACAGTAG+TGG 0.664907 6_4:+67189530 Msa0993820:CDS
AGAATTCTGCTGTACTACAG+AGG 0.673615 6_4:-67185695 None:intergenic
GAAGGAAATCTTACTTCACG+CGG 0.674498 6_4:-67187355 None:intergenic
GCAACAATGGATTCAACCAG+AGG 0.677444 6_4:+67189942 Msa0993820:CDS
ATCTACCCTCACTACAGCAG+CGG 0.677886 6_4:+67189570 Msa0993820:CDS
ATTGTTTGATGTAAATGACA+AGG 0.683725 6_4:-67185638 None:intergenic
ACTATATTATCTCTGTACAG+TGG 0.684756 6_4:+67190142 Msa0993820:three_prime_UTR
TTAGCATTATATAGTAACGT+TGG 0.685696 6_4:+67186636 Msa0993820:CDS
AAACTGACCGTAGTTGCCTG+GGG 0.689698 6_4:-67186681 None:intergenic
GATATGTCAAATAACAATGG+GGG 0.690886 6_4:+67189722 Msa0993820:CDS
AGTGATCTGGATGATAACAT+GGG 0.697820 6_4:+67190049 Msa0993820:CDS
AGCGCTGTCTGTGAAGTCAG+GGG 0.701664 6_4:-67190017 None:intergenic
CCTTGATTCCAATCACCAAG+GGG 0.715028 6_4:+67185267 Msa0993820:five_prime_UTR
AATCCACCACTACTGTTGTG+AGG 0.715466 6_4:-67189536 None:intergenic
GTGAAGCGTCCGTATGACGG+TGG 0.716785 6_4:+67186216 Msa0993820:CDS
GGATATGTCAAATAACAATG+GGG 0.717595 6_4:+67189721 Msa0993820:CDS
AATCAACAGAAGCTGCAGGG+TGG 0.731716 6_4:+67185751 Msa0993820:CDS
GCTTGGCAGTGTGACATATG+CGG 0.756800 6_4:+67187118 Msa0993820:CDS
CTTGATTCCAATCACCAAGG+GGG 0.762416 6_4:+67185268 Msa0993820:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAACATATTTTTAACGTTT+TGG + chr6_4:67186477-67186496 Msa0993820:intron 15.0%
!! TCTTTAATTCAAAGATTTAA+TGG + chr6_4:67186752-67186771 Msa0993820:intron 15.0%
!! ATATAATTAATTGACTATGA+TGG - chr6_4:67187843-67187862 None:intergenic 15.0%
!! ATCATAGTCAATTAATTATA+TGG + chr6_4:67187842-67187861 Msa0993820:intron 15.0%
!!! TAATTATATGGTTAAACTTT+TGG + chr6_4:67187854-67187873 Msa0993820:intron 15.0%
!!! AATTATATGGTTAAACTTTT+GGG + chr6_4:67187855-67187874 Msa0993820:intron 15.0%
!! CAATTATATAGATATCATTA+TGG - chr6_4:67188088-67188107 None:intergenic 15.0%
!! CATAATGATATCTATATAAT+TGG + chr6_4:67188086-67188105 Msa0993820:intron 15.0%
!!! AAAGTTTTATAACTTTTCTT+TGG - chr6_4:67188429-67188448 None:intergenic 15.0%
!! AAAGAAAAGTTATAAAACTT+TGG + chr6_4:67188428-67188447 Msa0993820:intron 15.0%
!!! AAATTATGGAAAATGAATTT+TGG - chr6_4:67188810-67188829 None:intergenic 15.0%
!! GGATTTGATTAAATAAATTA+TGG - chr6_4:67188824-67188843 None:intergenic 15.0%
!! ATCATTATCTTCATAAATAT+TGG + chr6_4:67188966-67188985 Msa0993820:intron 15.0%
!! AGTAAAACAAGAAAAATATA+AGG - chr6_4:67190187-67190206 None:intergenic 15.0%
!! TCAAACAATATTAGTATTTC+TGG + chr6_4:67185652-67185671 Msa0993820:CDS 20.0%
!! CAAACAATATTAGTATTTCT+GGG + chr6_4:67185653-67185672 Msa0993820:CDS 20.0%
!! CAAATAAAAAAACTGACATT+TGG - chr6_4:67186303-67186322 None:intergenic 20.0%
!!! GTATGATTCATTTTATTTAG+TGG + chr6_4:67186913-67186932 Msa0993820:intron 20.0%
!! AATCCTATAATTTATGAGTT+TGG - chr6_4:67187001-67187020 None:intergenic 20.0%
!! ACAGTAAATATAGTTAGATA+TGG - chr6_4:67187504-67187523 None:intergenic 20.0%
!!! TAATTTTTACCTTTTCTTAC+AGG + chr6_4:67188149-67188168 Msa0993820:intron 20.0%
!! CTGTAAAAAACAGTAAAAAA+TGG - chr6_4:67188458-67188477 None:intergenic 20.0%
!!! ATAATGTTTCTTTTGCAAAA+GGG + chr6_4:67188639-67188658 Msa0993820:intron 20.0%
!! AATATGGCAAAGAATAATTT+GGG + chr6_4:67189785-67189804 Msa0993820:CDS 20.0%
!!! TTTTCTTGTTTTACTTTTTG+TGG + chr6_4:67190192-67190211 Msa0993820:three_prime_UTR 20.0%
!! AATTATTTAGACTCAAAAGA+AGG + chr6_4:67190388-67190407 Msa0993820:three_prime_UTR 20.0%
! TTGTTTGATGTAAATGACAA+GGG - chr6_4:67185640-67185659 None:intergenic 25.0%
! ATTGTTTGATGTAAATGACA+AGG - chr6_4:67185641-67185660 None:intergenic 25.0%
!! TACATGATTGCTTTAGTTTA+CGG + chr6_4:67186342-67186361 Msa0993820:intron 25.0%
!! AGCAACAACTTTTTATGATT+TGG + chr6_4:67186365-67186384 Msa0993820:intron 25.0%
!! GCAACAACTTTTTATGATTT+GGG + chr6_4:67186366-67186385 Msa0993820:intron 25.0%
!! CAACAACTTTTTATGATTTG+GGG + chr6_4:67186367-67186386 Msa0993820:intron 25.0%
!! CTTCTTTTAACATCTAGATT+AGG + chr6_4:67186503-67186522 Msa0993820:intron 25.0%
! AGGATAATAGTATTGCATAT+TGG + chr6_4:67186562-67186581 Msa0993820:intron 25.0%
! TTAGCATTATATAGTAACGT+TGG + chr6_4:67186636-67186655 Msa0993820:CDS 25.0%
!! ATACAAGTGATAGCTTTTAT+GGG - chr6_4:67186941-67186960 None:intergenic 25.0%
! TATCTATCTCTCTCATAAAT+GGG + chr6_4:67186958-67186977 Msa0993820:intron 25.0%
! AAGCCAAACTCATAAATTAT+AGG + chr6_4:67186995-67187014 Msa0993820:intron 25.0%
! TATAACATTATCGCACAAAA+GGG - chr6_4:67187218-67187237 None:intergenic 25.0%
!! CAAATTATCAAGATTTTCAG+TGG - chr6_4:67187549-67187568 None:intergenic 25.0%
!!! AATTTGCTCAGATATTTTCT+TGG + chr6_4:67187563-67187582 Msa0993820:intron 25.0%
!! ATTTGCTCAGATATTTTCTT+GGG + chr6_4:67187564-67187583 Msa0993820:intron 25.0%
!!! ATGTTTTGAACAATCAAGAA+TGG - chr6_4:67187810-67187829 None:intergenic 25.0%
! ATTAATTGACTATGATGGTA+AGG - chr6_4:67187838-67187857 None:intergenic 25.0%
!!! GAGTTTCTTTTGAAAATCTT+GGG + chr6_4:67187995-67188014 Msa0993820:intron 25.0%
!!! AGTTTCTTTTGAAAATCTTG+GGG + chr6_4:67187996-67188015 Msa0993820:intron 25.0%
!!! ATAGTGTAGAGGTATTATTT+TGG + chr6_4:67188113-67188132 Msa0993820:intron 25.0%
!!! GTATAATGCTTCATGTTTTT+TGG + chr6_4:67188383-67188402 Msa0993820:intron 25.0%
!!! ATGTTTTTTGGAAATTGAGT+TGG + chr6_4:67188395-67188414 Msa0993820:intron 25.0%
!! AATGTGTTTGAAGTTATACA+TGG + chr6_4:67188505-67188524 Msa0993820:intron 25.0%
! TTATACATGGTCAACTAATA+AGG + chr6_4:67188518-67188537 Msa0993820:intron 25.0%
!! GATAATGTTTCTTTTGCAAA+AGG + chr6_4:67188638-67188657 Msa0993820:intron 25.0%
! TTATATTTCATAGTTTCTGC+AGG + chr6_4:67188767-67188786 Msa0993820:intron 25.0%
! TATATTTCATAGTTTCTGCA+GGG + chr6_4:67188768-67188787 Msa0993820:intron 25.0%
! ATCTGTAAAAACATAACAGA+AGG - chr6_4:67188860-67188879 None:intergenic 25.0%
!!! TTATTAAGTGTGTTTTGATC+AGG - chr6_4:67189251-67189270 None:intergenic 25.0%
! ATAAGCAGTAATCACAATAT+GGG + chr6_4:67189305-67189324 Msa0993820:CDS 25.0%
! AGGATATGTCAAATAACAAT+GGG + chr6_4:67189720-67189739 Msa0993820:CDS 25.0%
! GAATATGGCAAAGAATAATT+TGG + chr6_4:67189784-67189803 Msa0993820:CDS 25.0%
!!! CAAAGAATAATTTGGGTTTT+GGG + chr6_4:67189792-67189811 Msa0993820:CDS 25.0%
!!! AAAGAATAATTTGGGTTTTG+GGG + chr6_4:67189793-67189812 Msa0993820:CDS 25.0%
!!! TGCTTTAGAGATTTTATTTG+AGG + chr6_4:67190258-67190277 Msa0993820:three_prime_UTR 25.0%
!!! GCTTTAGAGATTTTATTTGA+GGG + chr6_4:67190259-67190278 Msa0993820:three_prime_UTR 25.0%
TTTGGAAATCTTAGAGAAAG+AGG + chr6_4:67185161-67185180 Msa0993820:five_prime_UTR 30.0%
CTCAATTTGTCTATTGTTTG+AGG + chr6_4:67185205-67185224 Msa0993820:five_prime_UTR 30.0%
! TTTTAAACACTAGTTAAGCC+TGG + chr6_4:67185231-67185250 Msa0993820:five_prime_UTR 30.0%
!!! AGTTCTGGAATTTTCTTTCA+AGG + chr6_4:67185346-67185365 Msa0993820:CDS 30.0%
!!! TTACGATTTTGGAATTGTGT+GGG - chr6_4:67185994-67186013 None:intergenic 30.0%
!!! ATTACGATTTTGGAATTGTG+TGG - chr6_4:67185995-67186014 None:intergenic 30.0%
! TTTTGTTGATCTGTTTTCTC+AGG + chr6_4:67186542-67186561 Msa0993820:intron 30.0%
TGCATATTGGAGAAAATTTG+TGG + chr6_4:67186575-67186594 Msa0993820:CDS 30.0%
TGTTATCATCATGTAACTGT+AGG + chr6_4:67186784-67186803 Msa0993820:intron 30.0%
ACAAATGGACAATAACTAGA+TGG - chr6_4:67186865-67186884 None:intergenic 30.0%
! GATACAAGTGATAGCTTTTA+TGG - chr6_4:67186942-67186961 None:intergenic 30.0%
GTATCTATCTCTCTCATAAA+TGG + chr6_4:67186957-67186976 Msa0993820:intron 30.0%
ATCTATCTCTCTCATAAATG+GGG + chr6_4:67186959-67186978 Msa0993820:intron 30.0%
TCTCATAAATGGGGAATAAA+TGG + chr6_4:67186968-67186987 Msa0993820:intron 30.0%
! GAAGTACCATGACAATAAAA+GGG - chr6_4:67187047-67187066 None:intergenic 30.0%
!! AGAAGTACCATGACAATAAA+AGG - chr6_4:67187048-67187067 None:intergenic 30.0%
TGCTGAAGAAACAAATATCA+AGG - chr6_4:67187097-67187116 None:intergenic 30.0%
GTATAACATTATCGCACAAA+AGG - chr6_4:67187219-67187238 None:intergenic 30.0%
TACTAATGATATCTGCATTC+TGG + chr6_4:67187236-67187255 Msa0993820:intron 30.0%
AATTTGACTACGTTAAGTCT+GGG - chr6_4:67187295-67187314 None:intergenic 30.0%
AAATTTGACTACGTTAAGTC+TGG - chr6_4:67187296-67187315 None:intergenic 30.0%
AGACTTAACGTAGTCAAATT+TGG + chr6_4:67187295-67187314 Msa0993820:CDS 30.0%
!!! GATCGATGAACTTTTGTTTT+TGG + chr6_4:67187327-67187346 Msa0993820:CDS 30.0%
CAATTCTCAAGTATCTACAA+CGG + chr6_4:67187885-67187904 Msa0993820:intron 30.0%
!! AAGTTCTATCCATTTTAACC+TGG + chr6_4:67187933-67187952 Msa0993820:intron 30.0%
AAGAAACTCCATCATTTAGA+GGG - chr6_4:67187984-67188003 None:intergenic 30.0%
AAAGAAACTCCATCATTTAG+AGG - chr6_4:67187985-67188004 None:intergenic 30.0%
!! GGAGTTTCTTTTGAAAATCT+TGG + chr6_4:67187994-67188013 Msa0993820:intron 30.0%
TAGATATCATTATGGAGTCA+GGG - chr6_4:67188080-67188099 None:intergenic 30.0%
ATAGATATCATTATGGAGTC+AGG - chr6_4:67188081-67188100 None:intergenic 30.0%
! TAATTGGAATGATAGTGTAG+AGG + chr6_4:67188102-67188121 Msa0993820:intron 30.0%
!!! AGAGGTATTATTTTGGAATG+TGG + chr6_4:67188120-67188139 Msa0993820:intron 30.0%
! AGAGTACAATTTCTGAAAGT+GGG + chr6_4:67188205-67188224 Msa0993820:CDS 30.0%
! ACTCACTGATTGACATATTT+AGG + chr6_4:67188293-67188312 Msa0993820:intron 30.0%
ATGGTCAACTAATAAGGATA+GGG + chr6_4:67188524-67188543 Msa0993820:intron 30.0%
!!! ATAATTTGTTTTCTTGAGCC+AGG + chr6_4:67188572-67188591 Msa0993820:intron 30.0%
AGTATTAATCTCTACAAACC+TGG - chr6_4:67188593-67188612 None:intergenic 30.0%
CTACAATCACTAAATGACTT+GGG + chr6_4:67188700-67188719 Msa0993820:CDS 30.0%
!! AAGATTTGTTAGAACTTTGC+AGG + chr6_4:67188732-67188751 Msa0993820:CDS 30.0%
!!! ATATGTTTTGATCACAACGT+TGG + chr6_4:67188917-67188936 Msa0993820:CDS 30.0%
ATTAATAAACACAGGAACAG+AGG - chr6_4:67189110-67189129 None:intergenic 30.0%
GTAGTAGGATTAATAAACAC+AGG - chr6_4:67189118-67189137 None:intergenic 30.0%
!! TAATTTTTCAAACTCTCTGC+AGG - chr6_4:67189146-67189165 None:intergenic 30.0%
AAACACACTTAATAAGCTGA+TGG + chr6_4:67189256-67189275 Msa0993820:CDS 30.0%
CATAAGCAGTAATCACAATA+TGG + chr6_4:67189304-67189323 Msa0993820:CDS 30.0%
CAGGATATGTCAAATAACAA+TGG + chr6_4:67189719-67189738 Msa0993820:CDS 30.0%
GGATATGTCAAATAACAATG+GGG + chr6_4:67189721-67189740 Msa0993820:CDS 30.0%
GATATGTCAAATAACAATGG+GGG + chr6_4:67189722-67189741 Msa0993820:CDS 30.0%
!! GCAAAGAATAATTTGGGTTT+TGG + chr6_4:67189791-67189810 Msa0993820:CDS 30.0%
!! AAGAATAATTTGGGTTTTGG+GGG + chr6_4:67189794-67189813 Msa0993820:CDS 30.0%
ACTATATTATCTCTGTACAG+TGG + chr6_4:67190142-67190161 Msa0993820:three_prime_UTR 30.0%
!! TTTTGTGGTCATTTTCTTGA+TGG + chr6_4:67190207-67190226 Msa0993820:three_prime_UTR 30.0%
!! AAAATCTCTAAAGCACCTAT+TGG - chr6_4:67190253-67190272 None:intergenic 30.0%
! TTGTTGTACATGTGTTTTGC+AGG + chr6_4:67185125-67185144 Msa0993820:five_prime_UTR 35.0%
! TGGAATTTTCTTTCAAGGAG+AGG + chr6_4:67185351-67185370 Msa0993820:CDS 35.0%
! GGAATTTTCTTTCAAGGAGA+GGG + chr6_4:67185352-67185371 Msa0993820:CDS 35.0%
! GAATTTTCTTTCAAGGAGAG+GGG + chr6_4:67185353-67185372 Msa0993820:CDS 35.0%
AACTCATCTAACACTATACC+TGG + chr6_4:67185421-67185440 Msa0993820:CDS 35.0%
TTATTCATATCCCCAGAAAC+CGG - chr6_4:67185469-67185488 None:intergenic 35.0%
! GTTTCTGGGGATATGAATAA+CGG + chr6_4:67185469-67185488 Msa0993820:CDS 35.0%
! TAACGGAATTTTGAACAGTG+TGG + chr6_4:67185486-67185505 Msa0993820:CDS 35.0%
! CAAAGAAGTGCAAGCATTAA+TGG + chr6_4:67185586-67185605 Msa0993820:CDS 35.0%
AGCAGGTGGGATATATTATT+TGG - chr6_4:67185892-67185911 None:intergenic 35.0%
AGATGATATAATGCAACAGC+AGG + chr6_4:67185939-67185958 Msa0993820:CDS 35.0%
!!! TACGATTTTGGAATTGTGTG+GGG - chr6_4:67185993-67186012 None:intergenic 35.0%
!! GTAACTGTGGATTACGATTT+TGG - chr6_4:67186005-67186024 None:intergenic 35.0%
AAATCGTAATCCACAGTTAC+AGG + chr6_4:67186005-67186024 Msa0993820:CDS 35.0%
! TATTTGCTGCATGTGAAAAC+CGG + chr6_4:67186317-67186336 Msa0993820:intron 35.0%
ACTAAAGCAATCATGTAGAC+CGG - chr6_4:67186339-67186358 None:intergenic 35.0%
CATCTAGATTAGGTACAACA+CGG + chr6_4:67186513-67186532 Msa0993820:intron 35.0%
! GTTTTTGCACTTCCATGAAT+AGG + chr6_4:67186700-67186719 Msa0993820:intron 35.0%
AATTTACAGCTCTTGTCTAG+AGG - chr6_4:67186825-67186844 None:intergenic 35.0%
TGGTACTTCTGATTCTTTGA+AGG + chr6_4:67187058-67187077 Msa0993820:intron 35.0%
GGTACTTCTGATTCTTTGAA+GGG + chr6_4:67187059-67187078 Msa0993820:intron 35.0%
! ATTTGTTTCTTCAGCATGCT+TGG + chr6_4:67187101-67187120 Msa0993820:intron 35.0%
! ATTCTGGATTTGCTTAACAG+AGG + chr6_4:67187252-67187271 Msa0993820:intron 35.0%
CTTAACGTAGTCAAATTTGG+TGG + chr6_4:67187298-67187317 Msa0993820:CDS 35.0%
GTGAAGTAAGATTTCCTTCT+GGG + chr6_4:67187359-67187378 Msa0993820:CDS 35.0%
CGTATTTACTCAAGACCTAA+AGG + chr6_4:67187465-67187484 Msa0993820:CDS 35.0%
GGTGAAGATCTATAACCTTT+AGG - chr6_4:67187483-67187502 None:intergenic 35.0%
TTTCTTGGGATTTCTGTGTA+AGG + chr6_4:67187578-67187597 Msa0993820:CDS 35.0%
GAATCTTGTAGTGTAGCTAA+AGG - chr6_4:67187772-67187791 None:intergenic 35.0%
GATAGAACTTTCACACCTTT+GGG - chr6_4:67187923-67187942 None:intergenic 35.0%
! TTGGTTCTTCCAGGTTAAAA+TGG - chr6_4:67187945-67187964 None:intergenic 35.0%
ATTGGTTGACCTGTAAGAAA+AGG - chr6_4:67188161-67188180 None:intergenic 35.0%
TTTGAGCAACCTGAACTAAT+TGG - chr6_4:67188179-67188198 None:intergenic 35.0%
CACTTTCAGAAATTGTACTC+TGG - chr6_4:67188206-67188225 None:intergenic 35.0%
! CAGAGTACAATTTCTGAAAG+TGG + chr6_4:67188204-67188223 Msa0993820:CDS 35.0%
!! GTAACATGTAAGTTGATGCA+TGG + chr6_4:67188265-67188284 Msa0993820:intron 35.0%
CATGGTCAACTAATAAGGAT+AGG + chr6_4:67188523-67188542 Msa0993820:intron 35.0%
TGGTCAACTAATAAGGATAG+GGG + chr6_4:67188525-67188544 Msa0993820:intron 35.0%
GCTACAATCACTAAATGACT+TGG + chr6_4:67188699-67188718 Msa0993820:CDS 35.0%
ACAGAAGGCAGAGAAAAAAA+AGG - chr6_4:67188845-67188864 None:intergenic 35.0%
! TCAGCTGTTTCAAATTACAC+AGG + chr6_4:67188990-67189009 Msa0993820:intron 35.0%
!! ATCTTTTGCATTTGGAGCTT+TGG - chr6_4:67189188-67189207 None:intergenic 35.0%
!!! TAAGTGTGTTTTGATCAGGT+GGG - chr6_4:67189247-67189266 None:intergenic 35.0%
!!! TTAAGTGTGTTTTGATCAGG+TGG - chr6_4:67189248-67189267 None:intergenic 35.0%
CTTATGTGATTGTTTGATCC+AGG - chr6_4:67189290-67189309 None:intergenic 35.0%
CATCAGAAGATTCTGGTAAT+TGG - chr6_4:67189378-67189397 None:intergenic 35.0%
ATTACCAGAATCTTCTGATG+AGG + chr6_4:67189378-67189397 Msa0993820:CDS 35.0%
! TCTGGTTTGAGTTACTGAAA+GGG - chr6_4:67189451-67189470 None:intergenic 35.0%
!! TTCTGGTTTGAGTTACTGAA+AGG - chr6_4:67189452-67189471 None:intergenic 35.0%
TCCATTATTTCCTTGACCAT+TGG - chr6_4:67189852-67189871 None:intergenic 35.0%
!! GAAATAATGGACCTGTTTCA+AGG + chr6_4:67189861-67189880 Msa0993820:CDS 35.0%
AAACTGTTACTCCTTGAAAC+AGG - chr6_4:67189875-67189894 None:intergenic 35.0%
AGTGATCTGGATGATAACAT+GGG + chr6_4:67190049-67190068 Msa0993820:CDS 35.0%
! ATGATAACATGGGTTTTACC+TGG + chr6_4:67190059-67190078 Msa0993820:CDS 35.0%
ACTCAACTTGTCAGTGTAAT+TGG + chr6_4:67190094-67190113 Msa0993820:three_prime_UTR 35.0%
!!! ATTTGAGGGTTGTTTTTTCC+TGG + chr6_4:67190273-67190292 Msa0993820:three_prime_UTR 35.0%
TACTAGTAGATTACACTTGC+AGG - chr6_4:67190299-67190318 None:intergenic 35.0%
! ACGGAAGAGATATTGTTGTT+TGG + chr6_4:67190338-67190357 Msa0993820:three_prime_UTR 35.0%
! CATGTGTTTTGCAGGTTTGT+CGG + chr6_4:67185133-67185152 Msa0993820:five_prime_UTR 40.0%
AGAAAGAGGAGATACAGTCA+GGG + chr6_4:67185175-67185194 Msa0993820:five_prime_UTR 40.0%
TACCTTGATTCCAATCACCA+AGG + chr6_4:67185265-67185284 Msa0993820:five_prime_UTR 40.0%
ACCTTGATTCCAATCACCAA+GGG + chr6_4:67185266-67185285 Msa0993820:five_prime_UTR 40.0%
GCTCAATCATCATCAAGTTC+TGG + chr6_4:67185331-67185350 Msa0993820:CDS 40.0%
TCTAACACTATACCTGGAAC+TGG + chr6_4:67185427-67185446 Msa0993820:CDS 40.0%
AAAGAACTAGCTCCAACACT+TGG - chr6_4:67185523-67185542 None:intergenic 40.0%
TGCTTGCACTTCTTTGCATA+TGG - chr6_4:67185582-67185601 None:intergenic 40.0%
TGATGTAAATGACAAGGGTG+AGG - chr6_4:67185635-67185654 None:intergenic 40.0%
AGAATTCTGCTGTACTACAG+AGG - chr6_4:67185698-67185717 None:intergenic 40.0%
TGAAACATAGCCTGTAACTG+TGG - chr6_4:67186018-67186037 None:intergenic 40.0%
!! TGAAAGATTTGTTGCTGAGC+CGG - chr6_4:67186084-67186103 None:intergenic 40.0%
AATCTTTCAGTCATTACCCC+AGG + chr6_4:67186095-67186114 Msa0993820:CDS 40.0%
TTGCAGCATCATCCTATTCA+TGG - chr6_4:67186715-67186734 None:intergenic 40.0%
TTGTCCATTTGTGAGAGAGA+TGG + chr6_4:67186873-67186892 Msa0993820:intron 40.0%
! TCCTTGCCCTTTTATTGTCA+TGG + chr6_4:67187038-67187057 Msa0993820:intron 40.0%
ACCATGACAATAAAAGGGCA+AGG - chr6_4:67187042-67187061 None:intergenic 40.0%
GACATATGCGGAACTAAATC+TGG + chr6_4:67187130-67187149 Msa0993820:CDS 40.0%
CGGAACTAAATCTGGAAGAA+GGG + chr6_4:67187138-67187157 Msa0993820:CDS 40.0%
GGAACTAAATCTGGAAGAAG+GGG + chr6_4:67187139-67187158 Msa0993820:CDS 40.0%
AAATCTGGAAGAAGGGGATT+TGG + chr6_4:67187145-67187164 Msa0993820:CDS 40.0%
! AACGTAGTCAAATTTGGTGG+TGG + chr6_4:67187301-67187320 Msa0993820:CDS 40.0%
GAAGGAAATCTTACTTCACG+CGG - chr6_4:67187358-67187377 None:intergenic 40.0%
CGTGAAGTAAGATTTCCTTC+TGG + chr6_4:67187358-67187377 Msa0993820:CDS 40.0%
TCTAACATCATCAACCCAGA+AGG - chr6_4:67187376-67187395 None:intergenic 40.0%
TATGATTCCGCATGCTATGT+TGG + chr6_4:67187646-67187665 Msa0993820:intron 40.0%
CTTACATCCAACATAGCATG+CGG - chr6_4:67187656-67187675 None:intergenic 40.0%
CGGTTCTTGAAATTTCCCAA+AGG + chr6_4:67187905-67187924 Msa0993820:intron 40.0%
GGATAGAACTTTCACACCTT+TGG - chr6_4:67187924-67187943 None:intergenic 40.0%
ACAGGTCAACCAATTAGTTC+AGG + chr6_4:67188167-67188186 Msa0993820:intron 40.0%
! ATTTCTGAAAGTGGGTCAGA+TGG + chr6_4:67188213-67188232 Msa0993820:CDS 40.0%
! TTTCTGAAAGTGGGTCAGAT+GGG + chr6_4:67188214-67188233 Msa0993820:CDS 40.0%
AGATAGTGAATCTGAGGAAG+AGG - chr6_4:67188323-67188342 None:intergenic 40.0%
CAAGAGAGATAGTGAATCTG+AGG - chr6_4:67188329-67188348 None:intergenic 40.0%
! TCTCCTGCATCTTTTGCATT+TGG - chr6_4:67189196-67189215 None:intergenic 40.0%
AATGCAAAAGATGCAGGAGA+TGG + chr6_4:67189196-67189215 Msa0993820:CDS 40.0%
!!! AAGTGTGTTTTGATCAGGTG+GGG - chr6_4:67189246-67189265 None:intergenic 40.0%
AATCACAATATGGGCAATCG+TGG + chr6_4:67189314-67189333 Msa0993820:CDS 40.0%
TTTGCCTCATCAGAAGATTC+TGG - chr6_4:67189385-67189404 None:intergenic 40.0%
AACTCAATGAATTCAAGCCC+TGG + chr6_4:67189404-67189423 Msa0993820:CDS 40.0%
! CTGGTTTGAGTTACTGAAAG+GGG - chr6_4:67189450-67189469 None:intergenic 40.0%
AATTCACCTCACAACAGTAG+TGG + chr6_4:67189530-67189549 Msa0993820:CDS 40.0%
ACCTCAACAAAATCACTCTC+AGG + chr6_4:67189646-67189665 Msa0993820:CDS 40.0%
CCTCAACAAAATCACTCTCA+GGG + chr6_4:67189647-67189666 Msa0993820:CDS 40.0%
GTACAACAACAGTCTCATAG+TGG + chr6_4:67189746-67189765 Msa0993820:CDS 40.0%
!! ATAGTGGACCCAATGTAAGT+GGG + chr6_4:67189762-67189781 Msa0993820:CDS 40.0%
ACCCAATGTAAGTGGGAATA+TGG + chr6_4:67189769-67189788 Msa0993820:CDS 40.0%
GCCATATTCCCACTTACATT+GGG - chr6_4:67189773-67189792 None:intergenic 40.0%
TGCCATATTCCCACTTACAT+TGG - chr6_4:67189774-67189793 None:intergenic 40.0%
GCCAATGGTCAAGGAAATAA+TGG + chr6_4:67189848-67189867 Msa0993820:CDS 40.0%
CGCTTTCTTTAACAGTGATC+TGG + chr6_4:67190036-67190055 Msa0993820:CDS 40.0%
CAGTGATCTGGATGATAACA+TGG + chr6_4:67190048-67190067 Msa0993820:CDS 40.0%
GTCATGACTCTTACTCCAAT+AGG + chr6_4:67190235-67190254 Msa0993820:three_prime_UTR 40.0%
! CTTTTAATCCGTGCAACACA+CGG + chr6_4:67190319-67190338 Msa0993820:three_prime_UTR 40.0%
GAGAAAGAGGAGATACAGTC+AGG + chr6_4:67185174-67185193 Msa0993820:five_prime_UTR 45.0%
CCTTGATTCCAATCACCAAG+GGG + chr6_4:67185267-67185286 Msa0993820:five_prime_UTR 45.0%
CTTGATTCCAATCACCAAGG+GGG + chr6_4:67185268-67185287 Msa0993820:five_prime_UTR 45.0%
GATGCAAATTCTGCACTCTC+TGG + chr6_4:67185550-67185569 Msa0993820:CDS 45.0%
TGTAAATGACAAGGGTGAGG+CGG - chr6_4:67185632-67185651 None:intergenic 45.0%
!! TATTTCTGGGTCACCTGCAA+TGG + chr6_4:67185666-67185685 Msa0993820:CDS 45.0%
CAGAATCAACAGAAGCTGCA+GGG + chr6_4:67185748-67185767 Msa0993820:CDS 45.0%
ACAAGTGCCTGGATCTTTCA+CGG + chr6_4:67185834-67185853 Msa0993820:CDS 45.0%
GGATCTTGAGTGAAAGATCC+AGG - chr6_4:67185871-67185890 None:intergenic 45.0%
!!! CCTACGTTTTTTCAGCAGGT+GGG - chr6_4:67185905-67185924 None:intergenic 45.0%
AGGCTATGTTTCAGCAACAG+AGG + chr6_4:67186025-67186044 Msa0993820:CDS 45.0%
!! AAAGATTTGTTGCTGAGCCG+GGG - chr6_4:67186082-67186101 None:intergenic 45.0%
!! GAAAGATTTGTTGCTGAGCC+GGG - chr6_4:67186083-67186102 None:intergenic 45.0%
AGCAACAACAGCAAATGCAG+AGG + chr6_4:67186154-67186173 Msa0993820:CDS 45.0%
ACAACAAATGATGCAGCCCT+CGG + chr6_4:67186188-67186207 Msa0993820:CDS 45.0%
!! AGAGGTACTGCATCAATCGA+CGG - chr6_4:67186263-67186282 None:intergenic 45.0%
! GTCGCTGTCTTTGATGATAG+AGG - chr6_4:67186281-67186300 None:intergenic 45.0%
! TGTTTTACCCCAGGCAACTA+CGG + chr6_4:67186674-67186693 Msa0993820:CDS 45.0%
AAAACTGACCGTAGTTGCCT+GGG - chr6_4:67186685-67186704 None:intergenic 45.0%
AAAAACTGACCGTAGTTGCC+TGG - chr6_4:67186686-67186705 None:intergenic 45.0%
GTGTCCATCTCTCTCACAAA+TGG - chr6_4:67186880-67186899 None:intergenic 45.0%
GCGGAACTAAATCTGGAAGA+AGG + chr6_4:67187137-67187156 Msa0993820:CDS 45.0%
! TGGAAGAAGGGGATTTGGTA+TGG + chr6_4:67187150-67187169 Msa0993820:intron 45.0%
CACACACTCTTGAACTGCTT+TGG - chr6_4:67187404-67187423 None:intergenic 45.0%
TTCGAGGAAGAAGTTCTTCG+TGG - chr6_4:67187606-67187625 None:intergenic 45.0%
TGTGGTGCAACTAACTTTCG+AGG - chr6_4:67187622-67187641 None:intergenic 45.0%
TCGAAAGTTAGTTGCACCAC+AGG + chr6_4:67187621-67187640 Msa0993820:CDS 45.0%
CATGCGGAATCATATACCTG+TGG - chr6_4:67187640-67187659 None:intergenic 45.0%
GCACAAAGACACACAGAATG+TGG - chr6_4:67187724-67187743 None:intergenic 45.0%
!! CTGGTACATTTGGTTCTTCC+AGG - chr6_4:67187954-67187973 None:intergenic 45.0%
! TCATTTAGAGGGCACGAATC+TGG - chr6_4:67187973-67187992 None:intergenic 45.0%
GATTCGTGCCCTCTAAATGA+TGG + chr6_4:67187973-67187992 Msa0993820:intron 45.0%
AAGACGACAGGTTTACTCAG+TGG - chr6_4:67188022-67188041 None:intergenic 45.0%
! TTCTGAAAGTGGGTCAGATG+GGG + chr6_4:67188215-67188234 Msa0993820:CDS 45.0%
AACACAGGAACAGAGGCTAA+TGG - chr6_4:67189103-67189122 None:intergenic 45.0%
TCTCTGCAGGCAAATGTAGT+AGG - chr6_4:67189133-67189152 None:intergenic 45.0%
! TTGCATTTGGAGCTTTGGTG+TGG - chr6_4:67189183-67189202 None:intergenic 45.0%
GCTCCAAATGCAAAAGATGC+AGG + chr6_4:67189190-67189209 Msa0993820:CDS 45.0%
AAAGATGCAGGAGATGGAAC+AGG + chr6_4:67189202-67189221 Msa0993820:CDS 45.0%
!!! AGTGTGTTTTGATCAGGTGG+GGG - chr6_4:67189245-67189264 None:intergenic 45.0%
! AAGCTGATGGCATTGAATCC+TGG + chr6_4:67189269-67189288 Msa0993820:CDS 45.0%
ATTGCCATAGCAGCTTGTGA+TGG - chr6_4:67189353-67189372 None:intergenic 45.0%
GTGAATTCTGCATAGAGCCT+GGG - chr6_4:67189517-67189536 None:intergenic 45.0%
AATCCACCACTACTGTTGTG+AGG - chr6_4:67189539-67189558 None:intergenic 45.0%
! CACTTAATGAGCGCTGTTGA+AGG - chr6_4:67189616-67189635 None:intergenic 45.0%
! CCCTGAGAGTGATTTTGTTG+AGG - chr6_4:67189650-67189669 None:intergenic 45.0%
!! TGCAGTGATTGGTTTCCTTG+AGG - chr6_4:67189674-67189693 None:intergenic 45.0%
TCATCTGCTGTTGCAGTGAT+TGG - chr6_4:67189685-67189704 None:intergenic 45.0%
ACATATCCTGCAGTAGTTGC+TGG - chr6_4:67189709-67189728 None:intergenic 45.0%
!! CATAGTGGACCCAATGTAAG+TGG + chr6_4:67189761-67189780 Msa0993820:CDS 45.0%
CTCCATTTGTGGTTGGAGTT+TGG - chr6_4:67189820-67189839 None:intergenic 45.0%
CAAACTCCAACCACAAATGG+AGG + chr6_4:67189818-67189837 Msa0993820:CDS 45.0%
! GCAACAATGGATTCAACCAG+AGG + chr6_4:67189942-67189961 Msa0993820:CDS 45.0%
ATCGGAAGCAACGTCTTGTA+AGG - chr6_4:67189993-67190012 None:intergenic 45.0%
TGTGAAGTCAGGGGCAAAAT+CGG - chr6_4:67190011-67190030 None:intergenic 45.0%
! CTGACAAGTTGAGTCAGTCA+TGG - chr6_4:67190088-67190107 None:intergenic 45.0%
TATCTCTTCCGTGTGTTGCA+CGG - chr6_4:67190330-67190349 None:intergenic 45.0%
GCAGGTTTGTCGGTGAAGTT+TGG + chr6_4:67185143-67185162 Msa0993820:five_prime_UTR 50.0%
CAAGGTAGCTATCGTAAGCC+AGG - chr6_4:67185252-67185271 None:intergenic 50.0%
! CCCCTTGGTGATTGGAATCA+AGG - chr6_4:67185270-67185289 None:intergenic 50.0%
AGGTTGGAATGACCAGTTCC+AGG - chr6_4:67185442-67185461 None:intergenic 50.0%
GGAACTGGTCATTCCAACCT+TGG + chr6_4:67185442-67185461 Msa0993820:CDS 50.0%
TGGTCATTCCAACCTTGGTC+CGG + chr6_4:67185447-67185466 Msa0993820:CDS 50.0%
GTAAATGACAAGGGTGAGGC+GGG - chr6_4:67185631-67185650 None:intergenic 50.0%
ACAGAGGAACCATCCATTGC+AGG - chr6_4:67185682-67185701 None:intergenic 50.0%
GCAGAATCAACAGAAGCTGC+AGG + chr6_4:67185747-67185766 Msa0993820:CDS 50.0%
AATCAACAGAAGCTGCAGGG+TGG + chr6_4:67185751-67185770 Msa0993820:CDS 50.0%
! CTTTTGCCTGCTTCTCAAGC+TGG + chr6_4:67185787-67185806 Msa0993820:CDS 50.0%
TGGCTCATCTTCGCACCAAA+CGG + chr6_4:67185807-67185826 Msa0993820:CDS 50.0%
CAAGTGCCTGGATCTTTCAC+GGG + chr6_4:67185835-67185854 Msa0993820:CDS 50.0%
CCCACCTGCTGAAAAAACGT+AGG + chr6_4:67185902-67185921 Msa0993820:CDS 50.0%
!!! GCCTACGTTTTTTCAGCAGG+TGG - chr6_4:67185906-67185925 None:intergenic 50.0%
!!! CCAGCCTACGTTTTTTCAGC+AGG - chr6_4:67185909-67185928 None:intergenic 50.0%
CCTGCTGAAAAAACGTAGGC+TGG + chr6_4:67185906-67185925 Msa0993820:CDS 50.0%
AATCTTTCAGTCGTTGCCCC+CGG + chr6_4:67186062-67186081 Msa0993820:CDS 50.0%
!! AAGATTTGTTGCTGAGCCGG+GGG - chr6_4:67186081-67186100 None:intergenic 50.0%
AAACTGCATTCGCTGAGCCT+GGG - chr6_4:67186115-67186134 None:intergenic 50.0%
! GAGGGCTGCATCATTTGTTG+TGG - chr6_4:67186189-67186208 None:intergenic 50.0%
!! GAGGTACTGCATCAATCGAC+GGG - chr6_4:67186262-67186281 None:intergenic 50.0%
ACTCTCCTCGTGCAAAGCAA+CGG + chr6_4:67186607-67186626 Msa0993820:CDS 50.0%
AACGTTGGACACCATTCAGC+TGG + chr6_4:67186651-67186670 Msa0993820:CDS 50.0%
GGGGTAAAACACCAGCTGAA+TGG - chr6_4:67186665-67186684 None:intergenic 50.0%
! TTCAGCTGGTGTTTTACCCC+AGG + chr6_4:67186665-67186684 Msa0993820:CDS 50.0%
AAACTGACCGTAGTTGCCTG+GGG - chr6_4:67186684-67186703 None:intergenic 50.0%
GCTTGGCAGTGTGACATATG+CGG + chr6_4:67187118-67187137 Msa0993820:CDS 50.0%
! CAGCTTCGTGTTGTTCGTGA+GGG + chr6_4:67187430-67187449 Msa0993820:CDS 50.0%
GGGCACGAATCTGGTACATT+TGG - chr6_4:67187964-67187983 None:intergenic 50.0%
CAGCGACAAAGAAAGACGAC+AGG - chr6_4:67188034-67188053 None:intergenic 50.0%
! GATCACAACGTTGGAGCACT+TGG + chr6_4:67188926-67188945 Msa0993820:CDS 50.0%
GAGATGGAACAGGCAGCAAA+TGG + chr6_4:67189212-67189231 Msa0993820:CDS 50.0%
GAACAGGCAGCAAATGGTCA+AGG + chr6_4:67189218-67189237 Msa0993820:CDS 50.0%
GCAATCGTGGTGCTTTGACT+GGG + chr6_4:67189327-67189346 Msa0993820:CDS 50.0%
CTTCTCGATGAAGTGAGCCA+GGG - chr6_4:67189424-67189443 None:intergenic 50.0%
CTGGCTCACTTCATCGAGAA+GGG + chr6_4:67189423-67189442 Msa0993820:CDS 50.0%
AAGAAGCTGGTGAGGGATTC+TGG - chr6_4:67189469-67189488 None:intergenic 50.0%
CCTTGCAAAGAAGCTGGTGA+GGG - chr6_4:67189476-67189495 None:intergenic 50.0%
ACCTTGCAAAGAAGCTGGTG+AGG - chr6_4:67189477-67189496 None:intergenic 50.0%
! CAGCTTCTTTGCAAGGTGCT+GGG + chr6_4:67189480-67189499 Msa0993820:CDS 50.0%
!! AGCTTCTTTGCAAGGTGCTG+GGG + chr6_4:67189481-67189500 Msa0993820:CDS 50.0%
GGTGAATTCTGCATAGAGCC+TGG - chr6_4:67189518-67189537 None:intergenic 50.0%
TCACCTCACAACAGTAGTGG+TGG + chr6_4:67189533-67189552 Msa0993820:CDS 50.0%
TGCTGTAGTGAGGGTAGATG+GGG - chr6_4:67189569-67189588 None:intergenic 50.0%
CTGCTGTAGTGAGGGTAGAT+GGG - chr6_4:67189570-67189589 None:intergenic 50.0%
ATCTACCCTCACTACAGCAG+CGG + chr6_4:67189570-67189589 Msa0993820:CDS 50.0%
! AATGAGCGCTGTTGAAGGTG+TGG - chr6_4:67189611-67189630 None:intergenic 50.0%
AATCACTCTCAGGGACCTCA+AGG + chr6_4:67189656-67189675 Msa0993820:CDS 50.0%
GATGATCCAGCAACTACTGC+AGG + chr6_4:67189700-67189719 Msa0993820:CDS 50.0%
GGCCAAACTCCAACCACAAA+TGG + chr6_4:67189815-67189834 Msa0993820:CDS 50.0%
ACTCCAACCACAAATGGAGG+AGG + chr6_4:67189821-67189840 Msa0993820:CDS 50.0%
GCGACATATCAGATGTCCTC+TGG - chr6_4:67189961-67189980 None:intergenic 50.0%
! AAGCGCTGTCTGTGAAGTCA+GGG - chr6_4:67190021-67190040 None:intergenic 50.0%
!! AAAGCGCTGTCTGTGAAGTC+AGG - chr6_4:67190022-67190041 None:intergenic 50.0%
TTGAGTCAGTCATGGCTTCC+AGG - chr6_4:67190080-67190099 None:intergenic 50.0%
GTAGATTACACTTGCAGGCC+AGG - chr6_4:67190294-67190313 None:intergenic 50.0%
! AGGTATGCCCCCTTGGTGAT+TGG - chr6_4:67185278-67185297 None:intergenic 55.0%
TACCTCCCATGGCACCTTCT+CGG + chr6_4:67185293-67185312 Msa0993820:exon 55.0%
TCCAACCTTGGTCCGGTTTC+TGG + chr6_4:67185454-67185473 Msa0993820:CDS 55.0%
CCAACCTTGGTCCGGTTTCT+GGG + chr6_4:67185455-67185474 Msa0993820:CDS 55.0%
CAACCTTGGTCCGGTTTCTG+GGG + chr6_4:67185456-67185475 Msa0993820:CDS 55.0%
TATCCCCAGAAACCGGACCA+AGG - chr6_4:67185462-67185481 None:intergenic 55.0%
GCAAACTCAGCGCCAAGTGT+TGG + chr6_4:67185508-67185527 Msa0993820:CDS 55.0%
TCTGGGTCACCTGCAATGGA+TGG + chr6_4:67185670-67185689 Msa0993820:CDS 55.0%
GATGAGCCAGCTTGAGAAGC+AGG - chr6_4:67185796-67185815 None:intergenic 55.0%
GGCTCATCTTCGCACCAAAC+GGG + chr6_4:67185808-67185827 Msa0993820:CDS 55.0%
TGTGCACCCGTGAAAGATCC+AGG - chr6_4:67185844-67185863 None:intergenic 55.0%
AACTGCATTCGCTGAGCCTG+GGG - chr6_4:67186114-67186133 None:intergenic 55.0%
GAAACTGCATTCGCTGAGCC+TGG - chr6_4:67186116-67186135 None:intergenic 55.0%
! GGTGTGAAGCGTCCGTATGA+CGG + chr6_4:67186213-67186232 Msa0993820:CDS 55.0%
CCAACACCACCACCGTCATA+CGG - chr6_4:67186228-67186247 None:intergenic 55.0%
! TATGACGGTGGTGGTGTTGG+AGG + chr6_4:67186228-67186247 Msa0993820:CDS 55.0%
! GCAGCTTCGTGTTGTTCGTG+AGG + chr6_4:67187429-67187448 Msa0993820:CDS 55.0%
TGCAAAAGGGTCCTGACTGC+TGG + chr6_4:67188652-67188671 Msa0993820:intron 55.0%
GCAAAAGGGTCCTGACTGCT+GGG + chr6_4:67188653-67188672 Msa0993820:intron 55.0%
GCGTCAGCTTGCGAAGAGTT+TGG + chr6_4:67188675-67188694 Msa0993820:CDS 55.0%
GGCAATCGTGGTGCTTTGAC+TGG + chr6_4:67189326-67189345 Msa0993820:CDS 55.0%
TGGGCCATCACAAGCTGCTA+TGG + chr6_4:67189346-67189365 Msa0993820:CDS 55.0%
CCTTCTCGATGAAGTGAGCC+AGG - chr6_4:67189425-67189444 None:intergenic 55.0%
CCTGGCTCACTTCATCGAGA+AGG + chr6_4:67189422-67189441 Msa0993820:CDS 55.0%
CCCTCACCAGCTTCTTTGCA+AGG + chr6_4:67189473-67189492 Msa0993820:CDS 55.0%
CCAGCACCTTGCAAAGAAGC+TGG - chr6_4:67189482-67189501 None:intergenic 55.0%
CCAGCTTCTTTGCAAGGTGC+TGG + chr6_4:67189479-67189498 Msa0993820:CDS 55.0%
GCTGCTGTAGTGAGGGTAGA+TGG - chr6_4:67189571-67189590 None:intergenic 55.0%
GAGCCTCCTCCATTTGTGGT+TGG - chr6_4:67189827-67189846 None:intergenic 55.0%
AATGGAGGAGGCTCTGCCAA+TGG + chr6_4:67189833-67189852 Msa0993820:CDS 55.0%
AGTGACTCTTCTGCAGCAGC+TGG + chr6_4:67189911-67189930 Msa0993820:CDS 55.0%
AGCGCTGTCTGTGAAGTCAG+GGG - chr6_4:67190020-67190039 None:intergenic 55.0%
ACCTCCCATGGCACCTTCTC+GGG + chr6_4:67185294-67185313 Msa0993820:exon 60.0%
AAACCTCCTGCCACCCGAGA+AGG - chr6_4:67185310-67185329 None:intergenic 60.0%
CCCAGAAACCGGACCAAGGT+TGG - chr6_4:67185458-67185477 None:intergenic 60.0%
CAGGCACTTGTGCACCCGTT+TGG - chr6_4:67185825-67185844 None:intergenic 60.0%
CAAACGGGTGCACAAGTGCC+TGG + chr6_4:67185823-67185842 Msa0993820:CDS 60.0%
TTCACGGGTGCACAAGTGCC+TGG + chr6_4:67185850-67185869 Msa0993820:CDS 60.0%
CAAATGATGCAGCCCTCGGC+TGG + chr6_4:67186192-67186211 Msa0993820:CDS 60.0%
! GTGAAGCGTCCGTATGACGG+TGG + chr6_4:67186216-67186235 Msa0993820:CDS 60.0%
AAGCGTCCGTATGACGGTGG+TGG + chr6_4:67186219-67186238 Msa0993820:CDS 60.0%
! CCGTATGACGGTGGTGGTGT+TGG + chr6_4:67186225-67186244 Msa0993820:CDS 60.0%
CTCCTCGTGCAAAGCAACGG+TGG + chr6_4:67186610-67186629 Msa0993820:CDS 60.0%
! CACCACCGTTGCTTTGCACG+AGG - chr6_4:67186615-67186634 None:intergenic 60.0%
GCTGGGGCTGCTATAATCCC+AGG + chr6_4:67189497-67189516 Msa0993820:CDS 60.0%
TGCTGCCGCTGCTGTAGTGA+GGG - chr6_4:67189578-67189597 None:intergenic 60.0%
GGCAGAGCCTCCTCCATTTG+TGG - chr6_4:67189831-67189850 None:intergenic 60.0%
GGAGGCTCTGCCAATGGTCA+AGG + chr6_4:67189839-67189858 Msa0993820:CDS 60.0%
GACTCTTCTGCAGCAGCTGG+TGG + chr6_4:67189914-67189933 Msa0993820:CDS 60.0%
TCTTCTGCAGCAGCTGGTGG+AGG + chr6_4:67189917-67189936 Msa0993820:CDS 60.0%
! CCATGGGAGGTATGCCCCCT+TGG - chr6_4:67185285-67185304 None:intergenic 65.0%
! CCAAGGGGGCATACCTCCCA+TGG + chr6_4:67185282-67185301 Msa0993820:exon 65.0%
!! ACCCGAGAAGGTGCCATGGG+AGG - chr6_4:67185298-67185317 None:intergenic 65.0%
TCCCATGGCACCTTCTCGGG+TGG + chr6_4:67185297-67185316 Msa0993820:exon 65.0%
!! GCCACCCGAGAAGGTGCCAT+GGG - chr6_4:67185301-67185320 None:intergenic 65.0%
!! TGCCACCCGAGAAGGTGCCA+TGG - chr6_4:67185302-67185321 None:intergenic 65.0%
ATGGCACCTTCTCGGGTGGC+AGG + chr6_4:67185301-67185320 Msa0993820:CDS 65.0%
GGACGCTTCACACCAGCCGA+GGG - chr6_4:67186207-67186226 None:intergenic 65.0%
CAAGCTGACGCCCAGCAGTC+AGG - chr6_4:67188666-67188685 None:intergenic 65.0%
CTGCTGCCGCTGCTGTAGTG+AGG - chr6_4:67189579-67189598 None:intergenic 65.0%
TCTGCAGCAGCTGGTGGAGG+CGG + chr6_4:67189920-67189939 Msa0993820:CDS 65.0%
GCTGGTGGAGGCGGCAACAA+TGG + chr6_4:67189929-67189948 Msa0993820:CDS 65.0%
GCACCTTCTCGGGTGGCAGG+AGG + chr6_4:67185304-67185323 Msa0993820:CDS 70.0%
CGGACGCTTCACACCAGCCG+AGG - chr6_4:67186208-67186227 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 67185060 67190413 67185060 ID=Msa0993820;Name=Msa0993820
chr6_4 mRNA 67185060 67190413 67185060 ID=Msa0993820-mRNA-1;Parent=Msa0993820;Name=Msa0993820-mRNA-1;_AED=0.03;_eAED=0.03;_QI=241|1|1|1|1|1|9|323|892
chr6_4 exon 67185060 67186305 67185060 ID=Msa0993820-mRNA-1:exon:12486;Parent=Msa0993820-mRNA-1
chr6_4 exon 67186564 67186695 67186564 ID=Msa0993820-mRNA-1:exon:12487;Parent=Msa0993820-mRNA-1
chr6_4 exon 67187115 67187166 67187115 ID=Msa0993820-mRNA-1:exon:12488;Parent=Msa0993820-mRNA-1
chr6_4 exon 67187272 67187486 67187272 ID=Msa0993820-mRNA-1:exon:12489;Parent=Msa0993820-mRNA-1
chr6_4 exon 67187574 67187642 67187574 ID=Msa0993820-mRNA-1:exon:12490;Parent=Msa0993820-mRNA-1
chr6_4 exon 67188171 67188271 67188171 ID=Msa0993820-mRNA-1:exon:12491;Parent=Msa0993820-mRNA-1
chr6_4 exon 67188660 67188753 67188660 ID=Msa0993820-mRNA-1:exon:12492;Parent=Msa0993820-mRNA-1
chr6_4 exon 67188878 67188947 67188878 ID=Msa0993820-mRNA-1:exon:12493;Parent=Msa0993820-mRNA-1
chr6_4 exon 67189150 67190413 67189150 ID=Msa0993820-mRNA-1:exon:12494;Parent=Msa0993820-mRNA-1
chr6_4 five_prime_UTR 67185060 67185300 67185060 ID=Msa0993820-mRNA-1:five_prime_utr;Parent=Msa0993820-mRNA-1
chr6_4 CDS 67185301 67186305 67185301 ID=Msa0993820-mRNA-1:cds;Parent=Msa0993820-mRNA-1
chr6_4 CDS 67186564 67186695 67186564 ID=Msa0993820-mRNA-1:cds;Parent=Msa0993820-mRNA-1
chr6_4 CDS 67187115 67187166 67187115 ID=Msa0993820-mRNA-1:cds;Parent=Msa0993820-mRNA-1
chr6_4 CDS 67187272 67187486 67187272 ID=Msa0993820-mRNA-1:cds;Parent=Msa0993820-mRNA-1
chr6_4 CDS 67187574 67187642 67187574 ID=Msa0993820-mRNA-1:cds;Parent=Msa0993820-mRNA-1
chr6_4 CDS 67188171 67188271 67188171 ID=Msa0993820-mRNA-1:cds;Parent=Msa0993820-mRNA-1
chr6_4 CDS 67188660 67188753 67188660 ID=Msa0993820-mRNA-1:cds;Parent=Msa0993820-mRNA-1
chr6_4 CDS 67188878 67188947 67188878 ID=Msa0993820-mRNA-1:cds;Parent=Msa0993820-mRNA-1
chr6_4 CDS 67189150 67190090 67189150 ID=Msa0993820-mRNA-1:cds;Parent=Msa0993820-mRNA-1
chr6_4 three_prime_UTR 67190091 67190413 67190091 ID=Msa0993820-mRNA-1:three_prime_utr;Parent=Msa0993820-mRNA-1
Gene Sequence

>Msa0993820

ATGGCACCTTCTCGGGTGGCAGGAGGTTTAGCTCAATCATCATCAAGTTCTGGAATTTTCTTTCAAGGAGAGGGGCAGTCACATAATTTAGTTAACTCTCACTTGAGCTCGTCATTAGTTAACTCATCTAACACTATACCTGGAACTGGTCATTCCAACCTTGGTCCGGTTTCTGGGGATATGAATAACGGAATTTTGAACAGTGTGGCAAACTCAGCGCCAAGTGTTGGAGCTAGTTCTTTAGTCACAGATGCAAATTCTGCACTCTCTGGTGAGCGCCATATGCAAAGAAGTGCAAGCATTAATGGAGATTCGTATTTAAGATTACCCGCCTCACCCTTGTCATTTACATCAAACAATATTAGTATTTCTGGGTCACCTGCAATGGATGGTTCCTCTGTAGTACAGCAGAATTCTCATCAAGATCAGAATGCTCAACAGTTGCAGCAGAATCAACAGAAGCTGCAGGGTGGTTCAAGTTCTATGCTTTTGCCTGCTTCTCAAGCTGGCTCATCTTCGCACCAAACGGGTGCACAAGTGCCTGGATCTTTCACGGGTGCACAAGTGCCTGGATCTTTCACTCAAGATCCAAATAATATATCCCACCTGCTGAAAAAACGTAGGCTGGATATCAAACAAGATGATATAATGCAACAGCAGGTAATACAGCAGCTTCTTCAGAGACAAGACCCCACACAATTCCAAAATCGTAATCCACAGTTACAGGCTATGTTTCAGCAACAGAGGCTGAAGCAACAACAAATCTTTCAGTCGTTGCCCCCGGCTCAGCAACAAATCTTTCAGTCATTACCCCAGGCTCAGCGAATGCAGTTTCTGCAGCAACAACAGCAGCAGCAACAACAGCAAATGCAGAGGCAGCAAATACCACAACAAATGATGCAGCCCTCGGCTGGTGTGAAGCGTCCGTATGACGGTGGTGGTGTTGGAGGTGTATGTGCCCGTCGATTGATGCAGTACCTCTATCATCAAAGACAGCGACCAAATGATAATAGTATTGCATATTGGAGAAAATTTGTGGCTGAATATTACTCTCCTCGTGCAAAGCAACGGTGGTGCTTAGCATTATATAGTAACGTTGGACACCATTCAGCTGGTGTTTTACCCCAGGCAACTACGCATGCTTGGCAGTGTGACATATGCGGAACTAAATCTGGAAGAAGGGGATTTGAGGCAACTTTTGATATACTACCCAGACTTAACGTAGTCAAATTTGGTGGTGGAGTGATCGATGAACTTTTGTTTTTGGACTTGCCGCGTGAAGTAAGATTTCCTTCTGGGTTGATGATGTTAGAATATACCAAAGCAGTTCAAGAGTGTGTGTATGAGCAGCTTCGTGTTGTTCGTGAGGGTCAACTTCGTATCGTATTTACTCAAGACCTAAAGATATTTTCTTGGGATTTCTGTGTAAGGCGCCACGAAGAACTTCTTCCTCGAAAGTTAGTTGCACCACAGGTCAACCAATTAGTTCAGGTTGCTCAAAAATGCCAGAGTACAATTTCTGAAAGTGGGTCAGATGGGGTCTCTCAGCAAGACTTGCAAACAAACAGTAACATGGTCCTGACTGCTGGGCGTCAGCTTGCGAAGAGTTTGGAGCTACAATCACTAAATGACTTGGGATTTTCGAAAAGATTTGTTAGAACTTTGCAGATTTCTGAAGTTTGCAATAGCATGAAAGATCTAATCGATATATGTTTTGATCACAACGTTGGAGCACTTGAGAGTTTGAAAAATTATTCTCAATATTCAACCACACCAAAGCTCCAAATGCAAAAGATGCAGGAGATGGAACAGGCAGCAAATGGTCAAGGACCCCCACCTGATCAAAACACACTTAATAAGCTGATGGCATTGAATCCTGGATCAAACAATCACATAAGCAGTAATCACAATATGGGCAATCGTGGTGCTTTGACTGGGCCATCACAAGCTGCTATGGCAATGTCCAATTACCAGAATCTTCTGATGAGGCAAAACTCAATGAATTCAAGCCCTGGCTCACTTCATCGAGAAGGGTCCCCTTTCAGTAACTCAAACCAGAATCCCTCACCAGCTTCTTTGCAAGGTGCTGGGGCTGCTATAATCCCAGGCTCTATGCAGAATTCACCTCACAACAGTAGTGGTGGATTCTCAAATCCCCATCTACCCTCACTACAGCAGCGGCAGCAGCAGCAACAACCACACCTTCAACAGCGCTCATTAAGTGCAAATAATTTACCTCAACAAAATCACTCTCAGGGACCTCAAGGAAACCAATCACTGCAACAGCAGATGATCCAGCAACTACTGCAGGATATGTCAAATAACAATGGGGGAGTACAACAACAGTCTCATAGTGGACCCAATGTAAGTGGGAATATGGCAAAGAATAATTTGGGTTTTGGGGGCCAAACTCCAACCACAAATGGAGGAGGCTCTGCCAATGGTCAAGGAAATAATGGACCTGTTTCAAGGAGTAACAGTTTCAAAGCAGCTTCAAACAGTGACTCTTCTGCAGCAGCTGGTGGAGGCGGCAACAATGGATTCAACCAGAGGACATCTGATATGTCGCAGAATCTAGCCTTACAAGACGTTGCTTCCGATTTTGCCCCTGACTTCACAGACAGCGCTTTCTTTAACAGTGATCTGGATGATAACATGGGTTTTACCTGGAAGCCATGA
Protein sequence

>Msa0993820

MAPSRVAGGLAQSSSSSGIFFQGEGQSHNLVNSHLSSSLVNSSNTIPGTGHSNLGPVSGDMNNGILNSVANSAPSVGASSLVTDANSALSGERHMQRSASINGDSYLRLPASPLSFTSNNISISGSPAMDGSSVVQQNSHQDQNAQQLQQNQQKLQGGSSSMLLPASQAGSSSHQTGAQVPGSFTGAQVPGSFTQDPNNISHLLKKRRLDIKQDDIMQQQVIQQLLQRQDPTQFQNRNPQLQAMFQQQRLKQQQIFQSLPPAQQQIFQSLPQAQRMQFLQQQQQQQQQQMQRQQIPQQMMQPSAGVKRPYDGGGVGGVCARRLMQYLYHQRQRPNDNSIAYWRKFVAEYYSPRAKQRWCLALYSNVGHHSAGVLPQATTHAWQCDICGTKSGRRGFEATFDILPRLNVVKFGGGVIDELLFLDLPREVRFPSGLMMLEYTKAVQECVYEQLRVVREGQLRIVFTQDLKIFSWDFCVRRHEELLPRKLVAPQVNQLVQVAQKCQSTISESGSDGVSQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRFVRTLQISEVCNSMKDLIDICFDHNVGALESLKNYSQYSTTPKLQMQKMQEMEQAANGQGPPPDQNTLNKLMALNPGSNNHISSNHNMGNRGALTGPSQAAMAMSNYQNLLMRQNSMNSSPGSLHREGSPFSNSNQNPSPASLQGAGAAIIPGSMQNSPHNSSGGFSNPHLPSLQQRQQQQQPHLQQRSLSANNLPQQNHSQGPQGNQSLQQQMIQQLLQDMSNNNGGVQQQSHSGPNVSGNMAKNNLGFGGQTPTTNGGGSANGQGNNGPVSRSNSFKAASNSDSSAAAGGGGNNGFNQRTSDMSQNLALQDVASDFAPDFTDSAFFNSDLDDNMGFTWKP*