Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1454290 | A0A072VQ77 | 96.684 | 754 | 18 | 2 | 1 | 750 | 1 | 751 | 0.0 | 1455 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012780 | Msa1454290 | 0.821838 | 3.262458e-53 | -8.615850e-47 |
| Msa0020630 | Msa1454290 | -0.840461 | 8.573326e-58 | -8.615850e-47 |
| Msa0027540 | Msa1454290 | -0.804074 | 2.572243e-49 | -8.615850e-47 |
| Msa0029020 | Msa1454290 | 0.801584 | 8.405854e-49 | -8.615850e-47 |
| Msa0032120 | Msa1454290 | -0.803597 | 3.231926e-49 | -8.615850e-47 |
| Msa0032400 | Msa1454290 | -0.807296 | 5.418685e-50 | -8.615850e-47 |
| Msa0038350 | Msa1454290 | 0.895183 | 1.220719e-75 | -8.615850e-47 |
| Msa0039420 | Msa1454290 | 0.806996 | 6.271421e-50 | -8.615850e-47 |
| Msa0044710 | Msa1454290 | -0.809586 | 1.758350e-50 | -8.615850e-47 |
| Msa0054640 | Msa1454290 | -0.801579 | 8.424807e-49 | -8.615850e-47 |
| Msa0075310 | Msa1454290 | -0.803439 | 3.484196e-49 | -8.615850e-47 |
| Msa0090040 | Msa1454290 | 0.842368 | 2.699332e-58 | -8.615850e-47 |
| Msa0091770 | Msa1454290 | -0.803195 | 3.914375e-49 | -8.615850e-47 |
| Msa0094100 | Msa1454290 | -0.808773 | 2.626439e-50 | -8.615850e-47 |
| Msa0101810 | Msa1454290 | 0.816570 | 5.165670e-52 | -8.615850e-47 |
| Msa0106110 | Msa1454290 | 0.808122 | 3.617157e-50 | -8.615850e-47 |
| Msa0106120 | Msa1454290 | 0.811464 | 6.910613e-51 | -8.615850e-47 |
| Msa0106370 | Msa1454290 | 0.820419 | 6.927956e-53 | -8.615850e-47 |
| Msa0120330 | Msa1454290 | -0.816758 | 4.689368e-52 | -8.615850e-47 |
| Msa1358870 | Msa1454290 | 0.812452 | 4.210291e-51 | -8.615850e-47 |
| Msa1367080 | Msa1454290 | -0.803753 | 2.998739e-49 | -8.615850e-47 |
| Msa1371080 | Msa1454290 | 0.838233 | 3.248111e-57 | -8.615850e-47 |
| Msa1373950 | Msa1454290 | -0.828173 | 1.041301e-54 | -8.615850e-47 |
| Msa1384120 | Msa1454290 | 0.844164 | 8.958553e-59 | -8.615850e-47 |
| Msa1385620 | Msa1454290 | -0.833674 | 4.655692e-56 | -8.615850e-47 |
| Msa1385900 | Msa1454290 | -0.827364 | 1.629673e-54 | -8.615850e-47 |
| Msa1395230 | Msa1454290 | 0.850611 | 1.518488e-60 | -8.615850e-47 |
| Msa1398480 | Msa1454290 | -0.803245 | 3.821869e-49 | -8.615850e-47 |
| Msa1411070 | Msa1454290 | -0.818572 | 1.827409e-52 | -8.615850e-47 |
| Msa1429360 | Msa1454290 | 0.817702 | 2.874719e-52 | -8.615850e-47 |
| Msa1431000 | Msa1454290 | -0.830487 | 2.857372e-55 | -8.615850e-47 |
| Msa1438270 | Msa1454290 | -0.836797 | 7.580264e-57 | -8.615850e-47 |
| Msa1447160 | Msa1454290 | 0.858482 | 7.990893e-63 | -8.615850e-47 |
| Msa1447440 | Msa1454290 | -0.826108 | 3.250193e-54 | -8.615850e-47 |
| Msa1449250 | Msa1454290 | 0.809585 | 1.759332e-50 | -8.615850e-47 |
| Msa1454290 | Msa1454910 | 0.828985 | 6.630102e-55 | -8.615850e-47 |
| Msa1454290 | Msa1460310 | 0.831540 | 1.575391e-55 | -8.615850e-47 |
| Msa1454290 | Msa1461250 | 0.802516 | 5.406505e-49 | -8.615850e-47 |
| Msa0616560 | Msa1454290 | 0.851986 | 6.206319e-61 | -8.615850e-47 |
| Msa0617560 | Msa1454290 | 0.837281 | 5.703070e-57 | -8.615850e-47 |
| Msa0621890 | Msa1454290 | -0.826613 | 2.464908e-54 | -8.615850e-47 |
| Msa0630990 | Msa1454290 | -0.807041 | 6.133627e-50 | -8.615850e-47 |
| Msa0638280 | Msa1454290 | -0.805377 | 1.374492e-49 | -8.615850e-47 |
| Msa0638320 | Msa1454290 | -0.809477 | 1.856029e-50 | -8.615850e-47 |
| Msa0647450 | Msa1454290 | 0.810745 | 9.892747e-51 | -8.615850e-47 |
| Msa0655990 | Msa1454290 | 0.865704 | 4.867876e-65 | -8.615850e-47 |
| Msa0657050 | Msa1454290 | -0.806289 | 8.842671e-50 | -8.615850e-47 |
| Msa0657670 | Msa1454290 | -0.831936 | 1.258500e-55 | -8.615850e-47 |
| Msa0659800 | Msa1454290 | 0.817253 | 3.629804e-52 | -8.615850e-47 |
| Msa0668090 | Msa1454290 | -0.831972 | 1.232704e-55 | -8.615850e-47 |
| Msa0688110 | Msa1454290 | -0.801246 | 9.858473e-49 | -8.615850e-47 |
| Msa0691080 | Msa1454290 | -0.804012 | 2.649391e-49 | -8.615850e-47 |
| Msa0699920 | Msa1454290 | 0.863542 | 2.311864e-64 | -8.615850e-47 |
| Msa0701030 | Msa1454290 | -0.806171 | 9.361538e-50 | -8.615850e-47 |
| Msa0701840 | Msa1454290 | 0.854031 | 1.612877e-61 | -8.615850e-47 |
| Msa0710070 | Msa1454290 | -0.813615 | 2.339558e-51 | -8.615850e-47 |
| Msa0714600 | Msa1454290 | -0.814944 | 1.190446e-51 | -8.615850e-47 |
| Msa0719490 | Msa1454290 | 0.846204 | 2.515615e-59 | -8.615850e-47 |
| Msa0728620 | Msa1454290 | -0.804064 | 2.584685e-49 | -8.615850e-47 |
| Msa0736710 | Msa1454290 | 0.835699 | 1.441482e-56 | -8.615850e-47 |
| Msa0743130 | Msa1454290 | 0.803866 | 2.841259e-49 | -8.615850e-47 |
| Msa0743650 | Msa1454290 | -0.805158 | 1.527669e-49 | -8.615850e-47 |
| Msa0744500 | Msa1454290 | -0.805799 | 1.121028e-49 | -8.615850e-47 |
| Msa0754720 | Msa1454290 | 0.808365 | 3.210435e-50 | -8.615850e-47 |
| Msa0756630 | Msa1454290 | 0.817160 | 3.809285e-52 | -8.615850e-47 |
| Msa0760890 | Msa1454290 | -0.804359 | 2.243408e-49 | -8.615850e-47 |
| Msa0770430 | Msa1454290 | -0.825456 | 4.640820e-54 | -8.615850e-47 |
| Msa0773610 | Msa1454290 | -0.803478 | 3.419542e-49 | -8.615850e-47 |
| Msa0781220 | Msa1454290 | 0.830452 | 2.913812e-55 | -8.615850e-47 |
| Msa0792510 | Msa1454290 | -0.827927 | 1.193610e-54 | -8.615850e-47 |
| Msa0802470 | Msa1454290 | 0.813434 | 2.564598e-51 | -8.615850e-47 |
| Msa0815750 | Msa1454290 | 0.839612 | 1.427905e-57 | -8.615850e-47 |
| Msa0826650 | Msa1454290 | -0.806931 | 6.471534e-50 | -8.615850e-47 |
| Msa0828570 | Msa1454290 | -0.840188 | 1.010956e-57 | -8.615850e-47 |
| Msa0837990 | Msa1454290 | -0.839562 | 1.471392e-57 | -8.615850e-47 |
| Msa0124570 | Msa1454290 | 0.808559 | 2.918604e-50 | -8.615850e-47 |
| Msa0135820 | Msa1454290 | -0.802867 | 4.575166e-49 | -8.615850e-47 |
| Msa0137120 | Msa1454290 | 0.944821 | 9.629299e-104 | -8.615850e-47 |
| Msa0152740 | Msa1454290 | 0.810370 | 1.192355e-50 | -8.615850e-47 |
| Msa0156650 | Msa1454290 | 0.801969 | 7.005185e-49 | -8.615850e-47 |
| Msa0159750 | Msa1454290 | -0.836959 | 6.892860e-57 | -8.615850e-47 |
| Msa0160000 | Msa1454290 | -0.806250 | 9.012753e-50 | -8.615850e-47 |
| Msa0168100 | Msa1454290 | -0.828396 | 9.199942e-55 | -8.615850e-47 |
| Msa0169140 | Msa1454290 | 0.814215 | 1.725754e-51 | -8.615850e-47 |
| Msa0182930 | Msa1454290 | -0.807768 | 4.300751e-50 | -8.615850e-47 |
| Msa0185640 | Msa1454290 | 0.849495 | 3.117631e-60 | -8.615850e-47 |
| Msa0185700 | Msa1454290 | -0.812160 | 4.876446e-51 | -8.615850e-47 |
| Msa0190830 | Msa1454290 | -0.807090 | 5.989303e-50 | -8.615850e-47 |
| Msa0196130 | Msa1454290 | 0.836530 | 8.866155e-57 | -8.615850e-47 |
| Msa0200950 | Msa1454290 | 0.865780 | 4.607681e-65 | -8.615850e-47 |
| Msa0207000 | Msa1454290 | -0.803764 | 2.983311e-49 | -8.615850e-47 |
| Msa0208390 | Msa1454290 | -0.809593 | 1.752481e-50 | -8.615850e-47 |
| Msa0215320 | Msa1454290 | 0.825540 | 4.433797e-54 | -8.615850e-47 |
| Msa0220970 | Msa1454290 | 0.836927 | 7.023886e-57 | -8.615850e-47 |
| Msa0225000 | Msa1454290 | -0.803891 | 2.807226e-49 | -8.615850e-47 |
| Msa0226250 | Msa1454290 | -0.823051 | 1.705329e-53 | -8.615850e-47 |
| Msa1254950 | Msa1454290 | -0.816617 | 5.041662e-52 | -8.615850e-47 |
| Msa1256540 | Msa1454290 | 0.853952 | 1.700085e-61 | -8.615850e-47 |
| Msa1265820 | Msa1454290 | 0.850317 | 1.835762e-60 | -8.615850e-47 |
| Msa1265960 | Msa1454290 | -0.841235 | 5.373119e-58 | -8.615850e-47 |
| Msa1269580 | Msa1454290 | 0.807541 | 4.806251e-50 | -8.615850e-47 |
| Msa1280120 | Msa1454290 | -0.817903 | 2.590410e-52 | -8.615850e-47 |
| Msa1289830 | Msa1454290 | 0.814429 | 1.547621e-51 | -8.615850e-47 |
| Msa1295690 | Msa1454290 | -0.813111 | 3.019265e-51 | -8.615850e-47 |
| Msa1296960 | Msa1454290 | 0.856725 | 2.648465e-62 | -8.615850e-47 |
| Msa1315510 | Msa1454290 | 0.807705 | 4.436492e-50 | -8.615850e-47 |
| Msa1326000 | Msa1454290 | -0.812011 | 5.255318e-51 | -8.615850e-47 |
| Msa1329990 | Msa1454290 | -0.821644 | 3.619255e-53 | -8.615850e-47 |
| Msa1335860 | Msa1454290 | -0.854015 | 1.630502e-61 | -8.615850e-47 |
| Msa1336470 | Msa1454290 | -0.805463 | 1.319089e-49 | -8.615850e-47 |
| Msa1342430 | Msa1454290 | -0.835114 | 2.026015e-56 | -8.615850e-47 |
| Msa1344010 | Msa1454290 | -0.807359 | 5.254668e-50 | -8.615850e-47 |
| Msa0374330 | Msa1454290 | -0.806640 | 7.456477e-50 | -8.615850e-47 |
| Msa0374410 | Msa1454290 | -0.810202 | 1.295841e-50 | -8.615850e-47 |
| Msa0377280 | Msa1454290 | -0.810322 | 1.221048e-50 | -8.615850e-47 |
| Msa0389060 | Msa1454290 | -0.807817 | 4.199735e-50 | -8.615850e-47 |
| Msa0404690 | Msa1454290 | -0.811741 | 6.014468e-51 | -8.615850e-47 |
| Msa0405250 | Msa1454290 | 0.849133 | 3.930803e-60 | -8.615850e-47 |
| Msa0412970 | Msa1454290 | -0.808564 | 2.911729e-50 | -8.615850e-47 |
| Msa0416520 | Msa1454290 | -0.806347 | 8.599224e-50 | -8.615850e-47 |
| Msa0423360 | Msa1454290 | 0.827788 | 1.289112e-54 | -8.615850e-47 |
| Msa0436280 | Msa1454290 | 0.815453 | 9.173624e-52 | -8.615850e-47 |
| Msa0437710 | Msa1454290 | -0.833424 | 5.376243e-56 | -8.615850e-47 |
| Msa0462590 | Msa1454290 | -0.819867 | 9.266937e-53 | -8.615850e-47 |
| Msa0463460 | Msa1454290 | -0.807884 | 4.064673e-50 | -8.615850e-47 |
| Msa0465680 | Msa1454290 | 0.807998 | 3.842762e-50 | -8.615850e-47 |
| Msa0467900 | Msa1454290 | 0.803154 | 3.990642e-49 | -8.615850e-47 |
| Msa0467920 | Msa1454290 | 0.860224 | 2.397156e-63 | -8.615850e-47 |
| Msa0980440 | Msa1454290 | -0.825561 | 4.383638e-54 | -8.615850e-47 |
| Msa0981740 | Msa1454290 | -0.804022 | 2.636825e-49 | -8.615850e-47 |
| Msa0981820 | Msa1454290 | 0.831885 | 1.295067e-55 | -8.615850e-47 |
| Msa0990960 | Msa1454290 | -0.824738 | 6.859364e-54 | -8.615850e-47 |
| Msa0993820 | Msa1454290 | 0.854321 | 1.330439e-61 | -8.615850e-47 |
| Msa1004210 | Msa1454290 | -0.831530 | 1.584862e-55 | -8.615850e-47 |
| Msa1007610 | Msa1454290 | 0.803478 | 3.419875e-49 | -8.615850e-47 |
| Msa1008490 | Msa1454290 | -0.832750 | 7.908191e-56 | -8.615850e-47 |
| Msa1009020 | Msa1454290 | -0.811423 | 7.053344e-51 | -8.615850e-47 |
| Msa1016670 | Msa1454290 | -0.813782 | 2.150602e-51 | -8.615850e-47 |
| Msa1020930 | Msa1454290 | 0.833259 | 5.909236e-56 | -8.615850e-47 |
| Msa1036390 | Msa1454290 | -0.866901 | 2.031139e-65 | -8.615850e-47 |
| Msa1037700 | Msa1454290 | 0.816350 | 5.787210e-52 | -8.615850e-47 |
| Msa1038050 | Msa1454290 | -0.815078 | 1.111591e-51 | -8.615850e-47 |
| Msa1040120 | Msa1454290 | -0.828030 | 1.127512e-54 | -8.615850e-47 |
| Msa1046610 | Msa1454290 | -0.834027 | 3.799089e-56 | -8.615850e-47 |
| Msa1073110 | Msa1454290 | 0.813206 | 2.878006e-51 | -8.615850e-47 |
| Msa1076480 | Msa1454290 | -0.806032 | 1.001672e-49 | -8.615850e-47 |
| Msa1076680 | Msa1454290 | -0.864101 | 1.548906e-64 | -8.615850e-47 |
| Msa1077390 | Msa1454290 | -0.809399 | 1.928864e-50 | -8.615850e-47 |
| Msa1080460 | Msa1454290 | -0.814278 | 1.671250e-51 | -8.615850e-47 |
| Msa1083410 | Msa1454290 | -0.834592 | 2.742186e-56 | -8.615850e-47 |
| Msa1098560 | Msa1454290 | -0.803787 | 2.950499e-49 | -8.615850e-47 |
| Msa0243930 | Msa1454290 | -0.810335 | 1.212899e-50 | -8.615850e-47 |
| Msa0258670 | Msa1454290 | 0.876074 | 1.863343e-68 | -8.615850e-47 |
| Msa0260950 | Msa1454290 | 0.808962 | 2.393433e-50 | -8.615850e-47 |
| Msa0262420 | Msa1454290 | 0.816356 | 5.768467e-52 | -8.615850e-47 |
| Msa0264940 | Msa1454290 | 0.829157 | 6.022320e-55 | -8.615850e-47 |
| Msa0265820 | Msa1454290 | -0.810317 | 1.224353e-50 | -8.615850e-47 |
| Msa0265980 | Msa1454290 | 0.810966 | 8.863664e-51 | -8.615850e-47 |
| Msa0266000 | Msa1454290 | 0.801421 | 9.074634e-49 | -8.615850e-47 |
| Msa0270440 | Msa1454290 | 0.819374 | 1.201250e-52 | -8.615850e-47 |
| Msa0272480 | Msa1454290 | 0.836592 | 8.551011e-57 | -8.615850e-47 |
| Msa0275670 | Msa1454290 | -0.816291 | 5.966367e-52 | -8.615850e-47 |
| Msa0288330 | Msa1454290 | -0.832034 | 1.190105e-55 | -8.615850e-47 |
| Msa0294560 | Msa1454290 | 0.802042 | 6.767138e-49 | -8.615850e-47 |
| Msa0298940 | Msa1454290 | -0.818121 | 2.312549e-52 | -8.615850e-47 |
| Msa0298970 | Msa1454290 | -0.820554 | 6.451749e-53 | -8.615850e-47 |
| Msa0302990 | Msa1454290 | 0.831540 | 1.575391e-55 | -8.615850e-47 |
| Msa0304740 | Msa1454290 | -0.830675 | 2.569034e-55 | -8.615850e-47 |
| Msa0309080 | Msa1454290 | 0.811180 | 7.965492e-51 | -8.615850e-47 |
| Msa0311580 | Msa1454290 | -0.803756 | 2.994109e-49 | -8.615850e-47 |
| Msa0312690 | Msa1454290 | 0.851044 | 1.146636e-60 | -8.615850e-47 |
| Msa0316160 | Msa1454290 | 0.826161 | 3.157734e-54 | -8.615850e-47 |
| Msa0325470 | Msa1454290 | -0.801068 | 1.071937e-48 | -8.615850e-47 |
| Msa0326670 | Msa1454290 | -0.814394 | 1.575657e-51 | -8.615850e-47 |
| Msa0327860 | Msa1454290 | -0.802011 | 6.869336e-49 | -8.615850e-47 |
| Msa0329870 | Msa1454290 | 0.834451 | 2.975140e-56 | -8.615850e-47 |
| Msa0331590 | Msa1454290 | -0.826209 | 3.074987e-54 | -8.615850e-47 |
| Msa0333720 | Msa1454290 | 0.800636 | 1.313609e-48 | -8.615850e-47 |
| Msa0335890 | Msa1454290 | 0.812098 | 5.029935e-51 | -8.615850e-47 |
| Msa0342200 | Msa1454290 | -0.809862 | 1.533836e-50 | -8.615850e-47 |
| Msa0342340 | Msa1454290 | 0.860851 | 1.547651e-63 | -8.615850e-47 |
| Msa0350020 | Msa1454290 | -0.829627 | 4.629931e-55 | -8.615850e-47 |
| Msa0358170 | Msa1454290 | -0.811929 | 5.474481e-51 | -8.615850e-47 |
| Msa0362740 | Msa1454290 | -0.805092 | 1.577109e-49 | -8.615850e-47 |
| Msa1111630 | Msa1454290 | -0.825569 | 4.364275e-54 | -8.615850e-47 |
| Msa1123980 | Msa1454290 | 0.825265 | 5.149544e-54 | -8.615850e-47 |
| Msa1124680 | Msa1454290 | 0.803937 | 2.746978e-49 | -8.615850e-47 |
| Msa1128160 | Msa1454290 | -0.848174 | 7.251950e-60 | -8.615850e-47 |
| Msa1133660 | Msa1454290 | -0.819302 | 1.247212e-52 | -8.615850e-47 |
| Msa1139240 | Msa1454290 | -0.811350 | 7.317029e-51 | -8.615850e-47 |
| Msa1143240 | Msa1454290 | 0.800395 | 1.470591e-48 | -8.615850e-47 |
| Msa1151960 | Msa1454290 | -0.824840 | 6.488633e-54 | -8.615850e-47 |
| Msa1165360 | Msa1454290 | -0.850076 | 2.145795e-60 | -8.615850e-47 |
| Msa1167000 | Msa1454290 | -0.816239 | 6.127121e-52 | -8.615850e-47 |
| Msa1167170 | Msa1454290 | -0.825381 | 4.834531e-54 | -8.615850e-47 |
| Msa1168680 | Msa1454290 | 0.806865 | 6.684466e-50 | -8.615850e-47 |
| Msa1168730 | Msa1454290 | 0.802841 | 4.633079e-49 | -8.615850e-47 |
| Msa1170040 | Msa1454290 | 0.857207 | 1.910661e-62 | -8.615850e-47 |
| Msa1171060 | Msa1454290 | 0.812457 | 4.199633e-51 | -8.615850e-47 |
| Msa1178160 | Msa1454290 | -0.803105 | 4.086023e-49 | -8.615850e-47 |
| Msa1182830 | Msa1454290 | -0.808141 | 3.583901e-50 | -8.615850e-47 |
| Msa1186570 | Msa1454290 | -0.824846 | 6.468266e-54 | -8.615850e-47 |
| Msa1193340 | Msa1454290 | -0.813202 | 2.883507e-51 | -8.615850e-47 |
| Msa1201990 | Msa1454290 | -0.801571 | 8.457883e-49 | -8.615850e-47 |
| Msa1204980 | Msa1454290 | 0.853067 | 3.053148e-61 | -8.615850e-47 |
| Msa1205010 | Msa1454290 | 0.852340 | 4.922720e-61 | -8.615850e-47 |
| Msa1220230 | Msa1454290 | -0.801439 | 8.999400e-49 | -8.615850e-47 |
| Msa1221200 | Msa1454290 | 0.811094 | 8.313425e-51 | -8.615850e-47 |
| Msa1222970 | Msa1454290 | -0.820729 | 5.880588e-53 | -8.615850e-47 |
| Msa1223460 | Msa1454290 | -0.873944 | 9.927340e-68 | -8.615850e-47 |
| Msa0509970 | Msa1454290 | -0.833689 | 4.616845e-56 | -8.615850e-47 |
| Msa0514330 | Msa1454290 | 0.837194 | 6.002657e-57 | -8.615850e-47 |
| Msa0516450 | Msa1454290 | -0.805516 | 1.285743e-49 | -8.615850e-47 |
| Msa0524890 | Msa1454290 | 0.867584 | 1.228409e-65 | -8.615850e-47 |
| Msa0526640 | Msa1454290 | 0.860419 | 2.092434e-63 | -8.615850e-47 |
| Msa0531990 | Msa1454290 | 0.837907 | 3.940628e-57 | -8.615850e-47 |
| Msa0532100 | Msa1454290 | 0.830438 | 2.936632e-55 | -8.615850e-47 |
| Msa0540070 | Msa1454290 | -0.804192 | 2.430404e-49 | -8.615850e-47 |
| Msa0548280 | Msa1454290 | 0.807069 | 6.052130e-50 | -8.615850e-47 |
| Msa0557680 | Msa1454290 | -0.823424 | 1.395454e-53 | -8.615850e-47 |
| Msa0563140 | Msa1454290 | -0.807294 | 5.422476e-50 | -8.615850e-47 |
| Msa0564510 | Msa1454290 | -0.802004 | 6.890843e-49 | -8.615850e-47 |
| Msa0574170 | Msa1454290 | -0.817932 | 2.551095e-52 | -8.615850e-47 |
| Msa0575850 | Msa1454290 | -0.804901 | 1.728965e-49 | -8.615850e-47 |
| Msa0579290 | Msa1454290 | -0.805834 | 1.102511e-49 | -8.615850e-47 |
| Msa0579390 | Msa1454290 | -0.819825 | 9.474352e-53 | -8.615850e-47 |
| Msa0585000 | Msa1454290 | 0.816420 | 5.580677e-52 | -8.615850e-47 |
| Msa0589640 | Msa1454290 | -0.811281 | 7.573140e-51 | -8.615850e-47 |
| Msa0846640 | Msa1454290 | -0.801994 | 6.922169e-49 | -8.615850e-47 |
| Msa0848360 | Msa1454290 | -0.805661 | 1.198637e-49 | -8.615850e-47 |
| Msa0853540 | Msa1454290 | -0.814460 | 1.523365e-51 | -8.615850e-47 |
| Msa0855020 | Msa1454290 | -0.802518 | 5.400045e-49 | -8.615850e-47 |
| Msa0856380 | Msa1454290 | 0.832555 | 8.841279e-56 | -8.615850e-47 |
| Msa0859430 | Msa1454290 | 0.825425 | 4.719758e-54 | -8.615850e-47 |
| Msa0863770 | Msa1454290 | -0.808262 | 3.376789e-50 | -8.615850e-47 |
| Msa0864690 | Msa1454290 | -0.801504 | 8.725930e-49 | -8.615850e-47 |
| Msa0865990 | Msa1454290 | 0.812682 | 3.748997e-51 | -8.615850e-47 |
| Msa0890250 | Msa1454290 | -0.802513 | 5.414242e-49 | -8.615850e-47 |
| Msa0891040 | Msa1454290 | -0.810744 | 9.896390e-51 | -8.615850e-47 |
| Msa0894890 | Msa1454290 | -0.815525 | 8.841704e-52 | -8.615850e-47 |
| Msa0909710 | Msa1454290 | -0.847890 | 8.682937e-60 | -8.615850e-47 |
| Msa0923820 | Msa1454290 | -0.812906 | 3.348329e-51 | -8.615850e-47 |
| Msa0928730 | Msa1454290 | 0.858908 | 5.962779e-63 | -8.615850e-47 |
| Msa0935370 | Msa1454290 | -0.802016 | 6.852317e-49 | -8.615850e-47 |
| Msa0938420 | Msa1454290 | -0.813962 | 1.962369e-51 | -8.615850e-47 |
| Msa0946120 | Msa1454290 | -0.824607 | 7.364688e-54 | -8.615850e-47 |
| Msa0951720 | Msa1454290 | -0.823183 | 1.588725e-53 | -8.615850e-47 |
| Msa0961420 | Msa1454290 | 0.816269 | 6.032509e-52 | -8.615850e-47 |
| Msa0964680 | Msa1454290 | -0.801430 | 9.036741e-49 | -8.615850e-47 |
| Msa0968320 | Msa1454290 | 0.849997 | 2.256563e-60 | -8.615850e-47 |
| Msa0969700 | Msa1454290 | -0.800831 | 1.198482e-48 | -8.615850e-47 |
| Msa0970050 | Msa1454290 | -0.832725 | 8.022888e-56 | -8.615850e-47 |
| Msa0970630 | Msa1454290 | 0.817286 | 3.568748e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1454290 | MtrunA17_Chr1g0209151 | 96.684 | 754 | 18 | 2 | 1 | 750 | 1 | 751 | 0.0 | 1455 |
| Msa1454290 | MtrunA17_Chr6g0483611 | 37.179 | 780 | 303 | 33 | 14 | 750 | 4 | 639 | 2.59e-100 | 322 |
| Msa1454290 | MtrunA17_Chr8g0392371 | 38.053 | 452 | 167 | 22 | 26 | 469 | 18 | 364 | 6.14e-54 | 196 |
| Msa1454290 | MtrunA17_Chr4g0048541 | 47.959 | 196 | 89 | 6 | 24 | 216 | 6 | 191 | 2.31e-46 | 171 |
| Msa1454290 | MtrunA17_Chr2g0279951 | 46.099 | 141 | 65 | 3 | 27 | 159 | 8 | 145 | 3.03e-32 | 130 |
| Msa1454290 | MtrunA17_Chr4g0049441 | 47.143 | 140 | 61 | 5 | 27 | 159 | 9 | 142 | 1.11e-29 | 123 |
| Msa1454290 | MtrunA17_Chr2g0305141 | 40.719 | 167 | 82 | 5 | 54 | 211 | 170 | 328 | 1.10e-26 | 117 |
| Msa1454290 | MtrunA17_Chr2g0277031 | 35.669 | 157 | 74 | 4 | 53 | 194 | 11 | 155 | 5.54e-25 | 106 |
| Msa1454290 | MtrunA17_Chr4g0065211 | 38.235 | 170 | 91 | 6 | 54 | 214 | 151 | 315 | 7.46e-25 | 111 |
| Msa1454290 | MtrunA17_Chr5g0428011 | 47.826 | 115 | 52 | 4 | 51 | 162 | 23 | 132 | 4.79e-24 | 105 |
| Msa1454290 | MtrunA17_Chr6g0461841 | 50.000 | 108 | 47 | 3 | 54 | 160 | 190 | 291 | 8.25e-23 | 104 |
| Msa1454290 | MtrunA17_Chr5g0428071 | 34.286 | 210 | 115 | 7 | 28 | 218 | 9 | 214 | 1.82e-21 | 97.8 |
| Msa1454290 | MtrunA17_Chr3g0117061 | 40.833 | 120 | 65 | 3 | 52 | 171 | 6 | 119 | 2.68e-21 | 92.8 |
| Msa1454290 | MtrunA17_Chr2g0310761 | 44.340 | 106 | 54 | 2 | 54 | 159 | 168 | 268 | 7.70e-21 | 98.2 |
| Msa1454290 | MtrunA17_Chr8g0357611 | 42.857 | 105 | 55 | 2 | 55 | 159 | 179 | 278 | 1.42e-20 | 97.8 |
| Msa1454290 | MtrunA17_Chr2g0310781 | 41.228 | 114 | 62 | 2 | 46 | 159 | 142 | 250 | 6.12e-20 | 95.5 |
| Msa1454290 | MtrunA17_Chr5g0440771 | 42.342 | 111 | 56 | 3 | 54 | 160 | 3 | 109 | 1.22e-19 | 87.8 |
| Msa1454290 | MtrunA17_Chr5g0412711 | 40.336 | 119 | 67 | 2 | 53 | 171 | 14 | 128 | 1.30e-19 | 88.6 |
| Msa1454290 | MtrunA17_Chr1g0196631 | 42.857 | 105 | 55 | 2 | 54 | 158 | 193 | 292 | 1.31e-19 | 94.4 |
| Msa1454290 | MtrunA17_Chr4g0058551 | 43.590 | 117 | 60 | 3 | 46 | 162 | 2 | 112 | 1.45e-19 | 87.0 |
| Msa1454290 | MtrunA17_Chr4g0072741 | 44.340 | 106 | 54 | 3 | 54 | 159 | 51 | 151 | 9.99e-16 | 81.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1454290 | AT2G01190.1 | 46.976 | 777 | 267 | 29 | 27 | 750 | 36 | 720 | 9.31e-154 | 464 |
| Msa1454290 | AT3G18230.1 | 41.348 | 445 | 193 | 13 | 32 | 467 | 38 | 423 | 1.47e-67 | 236 |
| Msa1454290 | AT4G05150.1 | 37.847 | 288 | 124 | 11 | 22 | 280 | 36 | 297 | 3.28e-39 | 152 |
| Msa1454290 | AT5G09620.1 | 50.676 | 148 | 62 | 4 | 27 | 166 | 8 | 152 | 2.69e-35 | 141 |
| Msa1454290 | AT5G09620.2 | 50.676 | 148 | 62 | 4 | 27 | 166 | 8 | 152 | 4.27e-35 | 140 |
| Msa1454290 | AT5G64430.1 | 48.993 | 149 | 59 | 4 | 27 | 161 | 8 | 153 | 1.85e-32 | 132 |
| Msa1454290 | AT1G25300.1 | 53.913 | 115 | 46 | 1 | 46 | 160 | 2 | 109 | 4.46e-32 | 126 |
| Msa1454290 | AT5G16220.1 | 48.462 | 130 | 56 | 3 | 35 | 162 | 19 | 139 | 6.99e-26 | 112 |
| Msa1454290 | AT5G49920.1 | 38.356 | 146 | 71 | 4 | 53 | 194 | 8 | 138 | 4.43e-25 | 106 |
| Msa1454290 | AT1G79570.3 | 35.882 | 170 | 93 | 5 | 51 | 220 | 173 | 326 | 1.54e-23 | 107 |
| Msa1454290 | AT3G46920.1 | 38.732 | 142 | 83 | 3 | 54 | 194 | 8 | 146 | 2.75e-23 | 106 |
| Msa1454290 | AT3G46920.2 | 38.732 | 142 | 83 | 3 | 54 | 194 | 74 | 212 | 2.81e-23 | 106 |
| Msa1454290 | AT1G79570.4 | 35.882 | 170 | 93 | 5 | 51 | 220 | 173 | 326 | 3.61e-23 | 106 |
| Msa1454290 | AT1G79570.5 | 35.882 | 170 | 93 | 5 | 51 | 220 | 173 | 326 | 3.61e-23 | 106 |
| Msa1454290 | AT1G79570.2 | 35.882 | 170 | 93 | 5 | 51 | 220 | 173 | 326 | 3.91e-23 | 106 |
| Msa1454290 | AT1G79570.1 | 35.882 | 170 | 93 | 5 | 51 | 220 | 173 | 326 | 3.91e-23 | 106 |
| Msa1454290 | AT1G04700.3 | 43.448 | 145 | 70 | 6 | 31 | 174 | 100 | 233 | 2.29e-22 | 103 |
| Msa1454290 | AT1G04700.1 | 47.934 | 121 | 53 | 5 | 55 | 174 | 122 | 233 | 2.99e-22 | 103 |
| Msa1454290 | AT1G04700.2 | 47.934 | 121 | 53 | 5 | 55 | 174 | 122 | 233 | 2.99e-22 | 103 |
| Msa1454290 | AT3G26510.1 | 40.769 | 130 | 68 | 3 | 50 | 174 | 5 | 130 | 4.83e-22 | 95.1 |
| Msa1454290 | AT3G26510.4 | 40.769 | 130 | 68 | 3 | 50 | 174 | 5 | 130 | 4.83e-22 | 95.1 |
| Msa1454290 | AT3G26510.3 | 40.769 | 130 | 68 | 3 | 50 | 174 | 5 | 130 | 4.83e-22 | 95.1 |
| Msa1454290 | AT3G26510.2 | 40.769 | 130 | 68 | 3 | 50 | 174 | 5 | 130 | 4.83e-22 | 95.1 |
| Msa1454290 | AT3G26510.6 | 40.769 | 130 | 68 | 3 | 50 | 174 | 5 | 130 | 4.83e-22 | 95.1 |
| Msa1454290 | AT3G26510.5 | 40.769 | 130 | 68 | 3 | 50 | 174 | 5 | 130 | 4.83e-22 | 95.1 |
| Msa1454290 | AT1G16270.1 | 44.444 | 108 | 55 | 2 | 52 | 159 | 162 | 264 | 6.45e-22 | 102 |
| Msa1454290 | AT1G16270.2 | 44.444 | 108 | 55 | 2 | 52 | 159 | 162 | 264 | 6.45e-22 | 102 |
| Msa1454290 | AT1G16270.3 | 44.444 | 108 | 55 | 2 | 52 | 159 | 162 | 264 | 6.45e-22 | 102 |
| Msa1454290 | AT3G24715.1 | 45.000 | 120 | 58 | 4 | 54 | 170 | 175 | 289 | 2.86e-21 | 100 |
| Msa1454290 | AT3G24715.3 | 45.000 | 120 | 58 | 4 | 54 | 170 | 175 | 289 | 2.86e-21 | 100 |
| Msa1454290 | AT3G24715.2 | 45.000 | 120 | 58 | 4 | 54 | 170 | 175 | 289 | 2.86e-21 | 100 |
| Msa1454290 | AT5G57610.1 | 38.849 | 139 | 79 | 4 | 54 | 192 | 23 | 155 | 3.46e-21 | 99.8 |
| Msa1454290 | AT2G35050.1 | 42.500 | 120 | 62 | 4 | 51 | 169 | 173 | 286 | 3.50e-21 | 100 |
| Msa1454290 | AT2G35050.2 | 42.500 | 120 | 62 | 4 | 51 | 169 | 173 | 286 | 3.50e-21 | 100 |
| Msa1454290 | AT1G70640.1 | 42.982 | 114 | 57 | 4 | 50 | 162 | 3 | 109 | 1.98e-19 | 87.0 |
| Msa1454290 | AT3G48240.1 | 43.103 | 116 | 57 | 2 | 53 | 168 | 12 | 118 | 5.90e-19 | 85.9 |
| Msa1454290 | AT5G63130.1 | 40.909 | 110 | 56 | 2 | 53 | 162 | 13 | 113 | 6.46e-14 | 71.6 |
| Msa1454290 | AT5G63130.2 | 40.909 | 110 | 56 | 2 | 53 | 162 | 13 | 113 | 6.46e-14 | 71.6 |
Find 253 sgRNAs with CRISPR-Local
Find 299 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTGGGGTTTGGAGGATTT+TGG | 0.144843 | tig0035090:-25968 | Msa1454290:intergenic |
| GTTTCTCAACCTGGATCTTT+TGG | 0.172762 | tig0035090:+24598 | Msa1454290:CDS |
| TTCTGTGCAGCAGGCTAATA+TGG | 0.185433 | tig0035090:+25911 | Msa1454290:CDS |
| TTTATTTCTGCGCTGCAAAA+AGG | 0.193438 | tig0035090:+23796 | Msa1454290:five_prime_UTR |
| CCTTGTTGGGGCTGTCTTGC+AGG | 0.210879 | tig0035090:-25879 | Msa1454290:intergenic |
| TGGCGAATTTGCCTCCTATT+AGG | 0.214995 | tig0035090:+24719 | Msa1454290:CDS |
| ATGGTGGTTCTGGTGGTGTT+AGG | 0.215415 | tig0035090:+24755 | Msa1454290:CDS |
| CTCTCCAAAACCTTGCTTAA+TGG | 0.228074 | tig0035090:+24190 | Msa1454290:CDS |
| GACTTCTTCGTCTCCGTCTT+TGG | 0.229377 | tig0035090:+24699 | Msa1454290:CDS |
| AGATGATACGGCACCGTTTA+TGG | 0.240170 | tig0035090:-24455 | Msa1454290:intergenic |
| AGCGGCCGTCATTTCAGTTT+TGG | 0.253172 | tig0035090:-26042 | Msa1454290:intergenic |
| GCAGCAGGATCAGAAGGTTT+TGG | 0.258724 | tig0035090:+24816 | Msa1454290:CDS |
| GGCGAATTTGCCTCCTATTA+GGG | 0.266693 | tig0035090:+24720 | Msa1454290:CDS |
| CTTGTGACTGTGCCTGAGTT+TGG | 0.274410 | tig0035090:-25131 | Msa1454290:intergenic |
| AATTATATGACAATCATTTC+AGG | 0.285362 | tig0035090:-26631 | Msa1454290:intergenic |
| AGAAATATTGTAACCTTGTT+GGG | 0.287856 | tig0035090:-25892 | Msa1454290:intergenic |
| GGAATTGACTGAGCAGATTC+AGG | 0.292958 | tig0035090:-24382 | Msa1454290:intergenic |
| TCTTCCATTAAGCAAGGTTT+TGG | 0.293356 | tig0035090:-24194 | Msa1454290:intergenic |
| CTTCTCCTGATTCAGTTTCA+AGG | 0.299311 | tig0035090:+25217 | Msa1454290:CDS |
| GGTTGACGGCGTTGGAGGTT+GGG | 0.306728 | tig0035090:-23909 | Msa1454290:intergenic |
| TGAACCAATGTGGTGGGGTT+TGG | 0.308831 | tig0035090:-25978 | Msa1454290:intergenic |
| TCTTCAACATGCACCCTAAT+AGG | 0.318542 | tig0035090:-24733 | Msa1454290:intergenic |
| CATATTGTTGTTGCTGCTGC+TGG | 0.328653 | tig0035090:-25650 | Msa1454290:intergenic |
| TTGTGACTGTGCCTGAGTTT+GGG | 0.328916 | tig0035090:-25130 | Msa1454290:intergenic |
| GTTGTTGGTGTTGGTGGTAT+TGG | 0.331151 | tig0035090:+24865 | Msa1454290:CDS |
| ATGGAGACTTCTTCGTCCTT+TGG | 0.332324 | tig0035090:+24673 | Msa1454290:CDS |
| CTGCATATATAAAACATAAA+AGG | 0.333555 | tig0035090:-26420 | Msa1454290:intergenic |
| TCTTGTATTTCATAATTCAT+AGG | 0.341458 | tig0035090:+26529 | Msa1454290:three_prime_UTR |
| GTATCCACCCTTGTAGTTCC+AGG | 0.341602 | tig0035090:-25537 | Msa1454290:intergenic |
| AGCATATTCATAAGCATAAC+TGG | 0.343168 | tig0035090:-26198 | Msa1454290:intergenic |
| GTCTCCATCATAGGCGAATC+AGG | 0.346187 | tig0035090:-24658 | Msa1454290:intergenic |
| GGTAGGGGAGCACTTCTAAT+GGG | 0.347012 | tig0035090:-26020 | Msa1454290:intergenic |
| ATTTGCTCTTGATAAATAAC+AGG | 0.349363 | tig0035090:-25504 | Msa1454290:intergenic |
| GGGGAGGAATCAACGGAATC+GGG | 0.352597 | tig0035090:-23980 | Msa1454290:intergenic |
| GTCCCATGAGTCGTTGTTGC+GGG | 0.355446 | tig0035090:-24008 | Msa1454290:intergenic |
| CATGTTGAAGATGGTGGTTC+TGG | 0.360128 | tig0035090:+24745 | Msa1454290:CDS |
| GGGTAGGGGAGCACTTCTAA+TGG | 0.363591 | tig0035090:-26021 | Msa1454290:intergenic |
| TTCAATTGGATGTGGCCTTT+CGG | 0.366787 | tig0035090:+26729 | Msa1454290:three_prime_UTR |
| TAGTTGAGGTGTGGTGGTGG+TGG | 0.370870 | tig0035090:-23956 | Msa1454290:intergenic |
| CGGTTGACGGCGTTGGAGGT+TGG | 0.372039 | tig0035090:-23910 | Msa1454290:intergenic |
| ACTGCACATCAGACGGAGTT+TGG | 0.374152 | tig0035090:-24053 | Msa1454290:intergenic |
| ATTGGTTCTGCTGTGGTTGT+TGG | 0.379755 | tig0035090:+24976 | Msa1454290:CDS |
| TGATGAACAGTTTGCTCAAA+TGG | 0.382086 | tig0035090:+24843 | Msa1454290:CDS |
| GGATAGTATGTAGGAATTGC+AGG | 0.382162 | tig0035090:-25810 | Msa1454290:intergenic |
| CAGAAATATTGTAACCTTGT+TGG | 0.382832 | tig0035090:-25893 | Msa1454290:intergenic |
| TTGACATGGTGTATGATTCA+TGG | 0.387901 | tig0035090:+26671 | Msa1454290:three_prime_UTR |
| CAGCAGCAGCAGTTTATTCA+TGG | 0.391314 | tig0035090:+25765 | Msa1454290:CDS |
| TCATTTCATTTCATCGATCA+TGG | 0.392855 | tig0035090:+23877 | Msa1454290:exon |
| CATCAGAGAATACCCTATTC+TGG | 0.394884 | tig0035090:-25005 | Msa1454290:intergenic |
| CCTGTACATGTTGCTGCACC+TGG | 0.396429 | tig0035090:-25593 | Msa1454290:intergenic |
| GAAATGAAATGAATAATAAC+TGG | 0.402131 | tig0035090:-23861 | Msa1454290:intergenic |
| GCGGCGGTTGGTGTTCCAAT+TGG | 0.402499 | tig0035090:+24958 | Msa1454290:CDS |
| TGGTGGTTCTGGTGGTGTTA+GGG | 0.407877 | tig0035090:+24756 | Msa1454290:CDS |
| CGGGTCATTGTTTCTTGACA+TGG | 0.410192 | tig0035090:+26657 | Msa1454290:three_prime_UTR |
| TTCTTGTTGACGAGTTCAAT+TGG | 0.411863 | tig0035090:+26715 | Msa1454290:three_prime_UTR |
| GCTGCTTACAGAGCTGCAAC+TGG | 0.412997 | tig0035090:+26062 | Msa1454290:CDS |
| GGATGCTGTGCAGGAACTTC+CGG | 0.414421 | tig0035090:-26308 | Msa1454290:intergenic |
| ACCTGTGGCTGAGGGGTTGG+TGG | 0.416544 | tig0035090:-25069 | Msa1454290:intergenic |
| TGCTGTTGATGCTGACTTGT+AGG | 0.418339 | tig0035090:-26110 | Msa1454290:intergenic |
| TGTTGGTGATTACCAGAATA+GGG | 0.419360 | tig0035090:+24993 | Msa1454290:CDS |
| CTCCGTCTGATGTGCAGTTA+CGG | 0.420983 | tig0035090:+24058 | Msa1454290:CDS |
| GCTCAAATGGTTGTTGGTGT+TGG | 0.422104 | tig0035090:+24856 | Msa1454290:CDS |
| TGTTCCTGATTCGCCTATGA+TGG | 0.422549 | tig0035090:+24654 | Msa1454290:CDS |
| AACGAATCTAGGTCTTCGTT+TGG | 0.425475 | tig0035090:-24241 | Msa1454290:intergenic |
| GGTCTTGATGATGATGTTGC+TGG | 0.426742 | tig0035090:+24529 | Msa1454290:CDS |
| CCTGATGGTGTTTCTCAACC+TGG | 0.431504 | tig0035090:+24589 | Msa1454290:CDS |
| GTTGACGGCGTTGGAGGTTG+GGG | 0.431698 | tig0035090:-23908 | Msa1454290:intergenic |
| CAACCTCCAACGCCGTCAAC+CGG | 0.431862 | tig0035090:+23911 | Msa1454290:CDS |
| AGGGGAGGAATCAACGGAAT+CGG | 0.433576 | tig0035090:-23981 | Msa1454290:intergenic |
| GCAAACCTTGAAACTGAATC+AGG | 0.434694 | tig0035090:-25222 | Msa1454290:intergenic |
| TCGTGTTTGCTACCTGTTTG+TGG | 0.436327 | tig0035090:+26457 | Msa1454290:three_prime_UTR |
| TTGTTGGTGATTACCAGAAT+AGG | 0.438247 | tig0035090:+24992 | Msa1454290:CDS |
| GAGGCTGTTGTTGCTGCTGA+TGG | 0.438597 | tig0035090:-25677 | Msa1454290:intergenic |
| CCAACCGCCGCCAGCGTAGT+TGG | 0.439807 | tig0035090:-24946 | Msa1454290:intergenic |
| TTATATATGCAGTTCTCGTT+GGG | 0.445090 | tig0035090:+26431 | Msa1454290:three_prime_UTR |
| GACGTAACAGAGAGCTTTGT+CGG | 0.447945 | tig0035090:-24104 | Msa1454290:intergenic |
| AGCTGCTACTATGATGCAAC+CGG | 0.450983 | tig0035090:+26289 | Msa1454290:CDS |
| GGCAAATACATACCACAAAC+AGG | 0.454170 | tig0035090:-26469 | Msa1454290:intergenic |
| ACCAATGTGGTGGGGTTTGG+AGG | 0.456388 | tig0035090:-25975 | Msa1454290:intergenic |
| CTCGATCCTACTGTTAGATC+CGG | 0.457694 | tig0035090:+24415 | Msa1454290:CDS |
| TGATGGGGCTGTTGCTGTGA+TGG | 0.459372 | tig0035090:-25840 | Msa1454290:intergenic |
| TAGTAGCAGCTGCCATGGTC+TGG | 0.462175 | tig0035090:-26277 | Msa1454290:intergenic |
| CTGGCAGGGGCAGCAGAACT+AGG | 0.463949 | tig0035090:-26179 | Msa1454290:intergenic |
| CCGTCTGACGGATGCTGTGC+AGG | 0.467762 | tig0035090:-26317 | Msa1454290:intergenic |
| TGGTTCTTTGATACCATAAA+CGG | 0.472006 | tig0035090:+24442 | Msa1454290:CDS |
| TTTATATATGCAGTTCTCGT+TGG | 0.473907 | tig0035090:+26430 | Msa1454290:three_prime_UTR |
| TTACAATATTTCTGTGCAGC+AGG | 0.475574 | tig0035090:+25902 | Msa1454290:CDS |
| GTAGGAACTTGCACAAATTG+AGG | 0.475620 | tig0035090:-26092 | Msa1454290:intergenic |
| TGGACAGAGGCTACAGGATG+AGG | 0.477050 | tig0035090:+24885 | Msa1454290:CDS |
| TAAATCTTCATCGGTTGAAA+CGG | 0.478449 | tig0035090:-24269 | Msa1454290:intergenic |
| CAAATGGTTGTTGGTGTTGG+TGG | 0.479436 | tig0035090:+24859 | Msa1454290:CDS |
| GCCGCCAGCGTAGTTGGCAC+TGG | 0.484966 | tig0035090:-24940 | Msa1454290:intergenic |
| CAGTTTGCTCAAATGGTTGT+TGG | 0.485362 | tig0035090:+24850 | Msa1454290:CDS |
| ACAACCACAGCAGAACCAAT+TGG | 0.486447 | tig0035090:-24973 | Msa1454290:intergenic |
| TGCGGCTGATGTTGAGGTTG+CGG | 0.486485 | tig0035090:-25717 | Msa1454290:intergenic |
| GGTCCGGTTGACGGCGTTGG+AGG | 0.489230 | tig0035090:-23914 | Msa1454290:intergenic |
| TACATAGTAAACCTGGTGAT+GGG | 0.489469 | tig0035090:-25856 | Msa1454290:intergenic |
| TTGGATGTGGCTGGAGGGAA+AGG | 0.491131 | tig0035090:-24034 | Msa1454290:intergenic |
| TTACAATTCCCAAAAGATCC+AGG | 0.491686 | tig0035090:-24607 | Msa1454290:intergenic |
| GCAGCAGCAGCAGGATCAGA+AGG | 0.491807 | tig0035090:+24810 | Msa1454290:CDS |
| GGTGGTCCGGTTGACGGCGT+TGG | 0.493691 | tig0035090:-23917 | Msa1454290:intergenic |
| GTGTGGTGGTGGTGGAGCCA+CGG | 0.495167 | tig0035090:-23948 | Msa1454290:intergenic |
| GGTGTATGATTCATGGCTAT+TGG | 0.495225 | tig0035090:+26678 | Msa1454290:three_prime_UTR |
| GATAACGGTGGTCCGGTTGA+CGG | 0.499187 | tig0035090:-23923 | Msa1454290:intergenic |
| GGGTAGTTGAGGTGTGGTGG+TGG | 0.500900 | tig0035090:-23959 | Msa1454290:intergenic |
| CGATCCACATGGTAGGATCC+AGG | 0.502009 | tig0035090:+25575 | Msa1454290:CDS |
| ACAACCTGTGGCTGAGGGGT+TGG | 0.502603 | tig0035090:-25072 | Msa1454290:intergenic |
| GGTGGAGCCACGGAGGATAA+CGG | 0.503298 | tig0035090:-23938 | Msa1454290:intergenic |
| TGCTGCTTCATGCCGTCTGA+CGG | 0.504939 | tig0035090:-26329 | Msa1454290:intergenic |
| TGTTGCTGTGATGGATATAC+AGG | 0.506750 | tig0035090:-25831 | Msa1454290:intergenic |
| ACCTCGATTAAGAGATGATA+CGG | 0.507397 | tig0035090:-24467 | Msa1454290:intergenic |
| CACGGAGGATAACGGTGGTC+CGG | 0.508705 | tig0035090:-23930 | Msa1454290:intergenic |
| GACGAAGAAGTCTCCATCAT+AGG | 0.509913 | tig0035090:-24667 | Msa1454290:intergenic |
| TGAGAATAGTATACTTGAGC+AGG | 0.512050 | tig0035090:-26224 | Msa1454290:intergenic |
| GAATTGTAAGAATTTGAAGC+AGG | 0.512443 | tig0035090:+24621 | Msa1454290:CDS |
| AGTATACTATTCTCAGCCTA+TGG | 0.513021 | tig0035090:+26232 | Msa1454290:CDS |
| AAAGTCAAGTGGCGGTGGCT+CGG | 0.513401 | tig0035090:+25188 | Msa1454290:CDS |
| CATATTGAACAAGGTTCCAC+TGG | 0.513758 | tig0035090:+24559 | Msa1454290:CDS |
| TGGTACTGTGAAGGCATTGT+GGG | 0.515032 | tig0035090:-26257 | Msa1454290:intergenic |
| CAGCAACATGTACAGGATCC+TGG | 0.517129 | tig0035090:+25600 | Msa1454290:CDS |
| TCGGGGTAGTTGAGGTGTGG+TGG | 0.520239 | tig0035090:-23962 | Msa1454290:intergenic |
| GTAGTTGGCACTGGAGGATG+AGG | 0.520654 | tig0035090:-24931 | Msa1454290:intergenic |
| AGCAGCAGCAGTTTATTCAT+GGG | 0.521183 | tig0035090:+25766 | Msa1454290:CDS |
| CCAACTACGCTGGCGGCGGT+TGG | 0.521638 | tig0035090:+24946 | Msa1454290:CDS |
| TATTCATAAGCATAACTGGC+AGG | 0.521937 | tig0035090:-26194 | Msa1454290:intergenic |
| TGCTGCTGCGGCTGATGTTG+AGG | 0.522699 | tig0035090:-25723 | Msa1454290:intergenic |
| CCAGGTGCAGCAACATGTAC+AGG | 0.525477 | tig0035090:+25593 | Msa1454290:CDS |
| CTTATACAGTATAATAACCT+TGG | 0.527643 | tig0035090:-26565 | Msa1454290:intergenic |
| TAATTCATAGGAAAGGAAAT+CGG | 0.527873 | tig0035090:+26541 | Msa1454290:three_prime_UTR |
| TCAAGATGCTAGTTCAATCA+AGG | 0.528420 | tig0035090:-26754 | Msa1454290:intergenic |
| AGACGGAGTTTGGATGTGGC+TGG | 0.531377 | tig0035090:-24043 | Msa1454290:intergenic |
| GAAGGCATTGTGGGCGCCAT+AGG | 0.531634 | tig0035090:-26248 | Msa1454290:intergenic |
| CAACAAAAGTCAAGTGGCGG+TGG | 0.531834 | tig0035090:+25183 | Msa1454290:CDS |
| GTTCCCGCAACAACGACTCA+TGG | 0.532318 | tig0035090:+24005 | Msa1454290:CDS |
| AGCTGATACTTGAAAGTGAA+AGG | 0.533088 | tig0035090:-24217 | Msa1454290:intergenic |
| TAACAGAGAGCTTTGTCGGT+TGG | 0.534354 | tig0035090:-24100 | Msa1454290:intergenic |
| CCACCATCCGTCTCAATCCA+TGG | 0.537944 | tig0035090:+26154 | Msa1454290:CDS |
| AGAGCTTTGTCGGTTGGACG+AGG | 0.539750 | tig0035090:-24094 | Msa1454290:intergenic |
| TTGACGAGTTCAATTGGATG+TGG | 0.539823 | tig0035090:+26721 | Msa1454290:three_prime_UTR |
| CGTCCCATGAGTCGTTGTTG+CGG | 0.542603 | tig0035090:-24009 | Msa1454290:intergenic |
| ACCACCAACCCCTCAGCCAC+AGG | 0.543936 | tig0035090:+25068 | Msa1454290:CDS |
| AGTGCCAACTACGCTGGCGG+CGG | 0.544621 | tig0035090:+24942 | Msa1454290:CDS |
| ACTTGAACAACCTGTGGCTG+AGG | 0.545262 | tig0035090:-25078 | Msa1454290:intergenic |
| AAATTCAACCTGGAACTACA+AGG | 0.546548 | tig0035090:+25529 | Msa1454290:CDS |
| TGGTATTGGACAGAGGCTAC+AGG | 0.548332 | tig0035090:+24879 | Msa1454290:CDS |
| CGCCGTAACTGCACATCAGA+CGG | 0.548433 | tig0035090:-24060 | Msa1454290:intergenic |
| GGCAGCAGAACTAGGAGCCA+TGG | 0.549533 | tig0035090:-26171 | Msa1454290:intergenic |
| GAAAGGTCTTCCATTAAGCA+AGG | 0.551628 | tig0035090:-24200 | Msa1454290:intergenic |
| CATCATAGTAGCAGCTGCCA+TGG | 0.552855 | tig0035090:-26282 | Msa1454290:intergenic |
| TGAGCAGATTCAGGTTTCGA+TGG | 0.553906 | tig0035090:-24373 | Msa1454290:intergenic |
| CCAGGTTGAGAAACACCATC+AGG | 0.555428 | tig0035090:-24589 | Msa1454290:intergenic |
| GTAGGGGAGCACTTCTAATG+GGG | 0.555535 | tig0035090:-26019 | Msa1454290:intergenic |
| TCTGTGCAGCAGGCTAATAT+GGG | 0.556647 | tig0035090:+25912 | Msa1454290:CDS |
| GGAACGAGGGGAGGAATCAA+CGG | 0.556888 | tig0035090:-23987 | Msa1454290:intergenic |
| CAACGGAATCGGGGTAGTTG+AGG | 0.557276 | tig0035090:-23970 | Msa1454290:intergenic |
| ATTCTCTGATGATGAGAGAT+CGG | 0.557288 | tig0035090:+25017 | Msa1454290:CDS |
| TATTTCATAATTCATAGGAA+AGG | 0.557544 | tig0035090:+26534 | Msa1454290:three_prime_UTR |
| GGATATACAGGATAGTATGT+AGG | 0.557743 | tig0035090:-25819 | Msa1454290:intergenic |
| TCCTCCAGTGCCAACTACGC+TGG | 0.559724 | tig0035090:+24936 | Msa1454290:CDS |
| GACAAAGCTCTCTGTTACGT+CGG | 0.560297 | tig0035090:+24106 | Msa1454290:CDS |
| TGCTGTTGCAGCAAATAACC+AGG | 0.561601 | tig0035090:-25618 | Msa1454290:intergenic |
| CTACTGTTAGATCCGGTGAA+TGG | 0.563307 | tig0035090:+24422 | Msa1454290:CDS |
| GGACAGAGGCTACAGGATGA+GGG | 0.567639 | tig0035090:+24886 | Msa1454290:CDS |
| GGTTGCTGCGGCTGATGTTG+AGG | 0.568177 | tig0035090:-25696 | Msa1454290:intergenic |
| TTTGTTGAACCAATGTGGTG+GGG | 0.570291 | tig0035090:-25983 | Msa1454290:intergenic |
| GTCTTGATGATGATGTTGCT+GGG | 0.576576 | tig0035090:+24530 | Msa1454290:CDS |
| GTTGAAGATGGTGGTTCTGG+TGG | 0.576663 | tig0035090:+24748 | Msa1454290:CDS |
| AAACGGAGATTAACGAATCT+AGG | 0.578203 | tig0035090:-24252 | Msa1454290:intergenic |
| CCATGGATTGAGACGGATGG+TGG | 0.578757 | tig0035090:-26154 | Msa1454290:intergenic |
| GGATAAATCCGCGAGTGAGG+TGG | 0.580510 | tig0035090:-24161 | Msa1454290:intergenic |
| GTACATAGTAAACCTGGTGA+TGG | 0.582079 | tig0035090:-25857 | Msa1454290:intergenic |
| ATTAGGGTGCATGTTGAAGA+TGG | 0.582359 | tig0035090:+24736 | Msa1454290:CDS |
| GAAATATTGTAACCTTGTTG+GGG | 0.583775 | tig0035090:-25891 | Msa1454290:intergenic |
| GAGTCGTTGTTGCGGGAACG+AGG | 0.584939 | tig0035090:-24001 | Msa1454290:intergenic |
| TTCCCGCAACAACGACTCAT+GGG | 0.585174 | tig0035090:+24006 | Msa1454290:CDS |
| GTCGTTGTTGCGGGAACGAG+GGG | 0.585961 | tig0035090:-23999 | Msa1454290:intergenic |
| ATCGGATCATGGTGTGCCTG+TGG | 0.586106 | tig0035090:+25035 | Msa1454290:CDS |
| ATTCATAAGCATAACTGGCA+GGG | 0.588015 | tig0035090:-26193 | Msa1454290:intergenic |
| GGAGGCAAATTCGCCAAAGA+CGG | 0.588179 | tig0035090:-24712 | Msa1454290:intergenic |
| TACTCACAAGTGCAAACTTG+TGG | 0.589246 | tig0035090:-26805 | Msa1454290:intergenic |
| TTCATAAGCATAACTGGCAG+GGG | 0.590768 | tig0035090:-26192 | Msa1454290:intergenic |
| TCCACTGGAGAAGCTCCTGA+TGG | 0.593224 | tig0035090:+24574 | Msa1454290:CDS |
| TGAAGCTGTTGTTGCTGCTG+CGG | 0.593547 | tig0035090:-25735 | Msa1454290:intergenic |
| TGTTCCAATTGGTTCTGCTG+TGG | 0.593696 | tig0035090:+24969 | Msa1454290:CDS |
| AGACGAAGAAGTCGAACCAA+AGG | 0.594657 | tig0035090:-24689 | Msa1454290:intergenic |
| ACAGCAACAGCCCCATCACC+AGG | 0.596464 | tig0035090:+25845 | Msa1454290:CDS |
| CGGAGTTTGGATGTGGCTGG+AGG | 0.598235 | tig0035090:-24040 | Msa1454290:intergenic |
| TGAACGCGCCACCTCACTCG+CGG | 0.598732 | tig0035090:+24153 | Msa1454290:CDS |
| AGTCGTTGTTGCGGGAACGA+GGG | 0.600229 | tig0035090:-24000 | Msa1454290:intergenic |
| CTTGAACAACCTGTGGCTGA+GGG | 0.600315 | tig0035090:-25077 | Msa1454290:intergenic |
| GCCAGCGTAGTTGGCACTGG+AGG | 0.600507 | tig0035090:-24937 | Msa1454290:intergenic |
| ACATAGTAAACCTGGTGATG+GGG | 0.601720 | tig0035090:-25855 | Msa1454290:intergenic |
| CATCAGACGGAGTTTGGATG+TGG | 0.601884 | tig0035090:-24047 | Msa1454290:intergenic |
| GCAGCAGCAGTTTATTCATG+GGG | 0.604368 | tig0035090:+25767 | Msa1454290:CDS |
| GTTGTTGCGGGAACGAGGGG+AGG | 0.604508 | tig0035090:-23996 | Msa1454290:intergenic |
| TCCTCCAAACCCCACCACAT+TGG | 0.605452 | tig0035090:+25974 | Msa1454290:CDS |
| CTTGAAACTGAATCAGGAGA+AGG | 0.605496 | tig0035090:-25216 | Msa1454290:intergenic |
| TAGGAAAGGAAATCGGTCCA+AGG | 0.605564 | tig0035090:+26548 | Msa1454290:three_prime_UTR |
| GCCGTATCATCTCTTAATCG+AGG | 0.606247 | tig0035090:+24466 | Msa1454290:CDS |
| CTGGTACTGTGAAGGCATTG+TGG | 0.606843 | tig0035090:-26258 | Msa1454290:intergenic |
| GATGATGAGAGATCGGATCA+TGG | 0.609090 | tig0035090:+25024 | Msa1454290:CDS |
| CTGGATCCTACCATGTGGAT+CGG | 0.610151 | tig0035090:-25574 | Msa1454290:intergenic |
| GGAGTTTGGATGTGGCTGGA+GGG | 0.611331 | tig0035090:-24039 | Msa1454290:intergenic |
| TTGCAGGTACATAGTAAACC+TGG | 0.612429 | tig0035090:-25863 | Msa1454290:intergenic |
| CCTGCACAGCATCCGTCAGA+CGG | 0.613220 | tig0035090:+26317 | Msa1454290:CDS |
| CGTGGATAAATCCGCGAGTG+AGG | 0.614369 | tig0035090:-24164 | Msa1454290:intergenic |
| GATAGTATGTAGGAATTGCA+GGG | 0.616127 | tig0035090:-25809 | Msa1454290:intergenic |
| GGGAGGAATCAACGGAATCG+GGG | 0.618967 | tig0035090:-23979 | Msa1454290:intergenic |
| GGTATCAAAGAACCATTCAC+CGG | 0.620315 | tig0035090:-24434 | Msa1454290:intergenic |
| TCGGATCATGGTGTGCCTGT+GGG | 0.622213 | tig0035090:+25036 | Msa1454290:CDS |
| TCAAGCTCAAACCCAAACTC+AGG | 0.623323 | tig0035090:+25119 | Msa1454290:CDS |
| GGGAATAATCATATTGAACA+AGG | 0.623357 | tig0035090:+24550 | Msa1454290:CDS |
| TCAACATGCACCCTAATAGG+AGG | 0.625269 | tig0035090:-24730 | Msa1454290:intergenic |
| ATCAATTTGTCCGATCCACA+TGG | 0.627947 | tig0035090:+25564 | Msa1454290:CDS |
| CATTCACCGGATCTAACAGT+AGG | 0.628644 | tig0035090:-24421 | Msa1454290:intergenic |
| GAGCAAATTCAAATTCAACC+TGG | 0.628952 | tig0035090:+25519 | Msa1454290:CDS |
| ACAGTAGGATCGAGAATTTG+CGG | 0.630234 | tig0035090:-24406 | Msa1454290:intergenic |
| TCCAGTGCCAACTACGCTGG+CGG | 0.630709 | tig0035090:+24939 | Msa1454290:CDS |
| AAAGCTCTCTGTTACGTCGG+TGG | 0.631441 | tig0035090:+24109 | Msa1454290:CDS |
| GCCATGGTCTGGTACTGTGA+AGG | 0.631831 | tig0035090:-26266 | Msa1454290:intergenic |
| CCTACCCAAAACTGAAATGA+CGG | 0.634610 | tig0035090:+26037 | Msa1454290:CDS |
| CCTGCAAGACAGCCCCAACA+AGG | 0.639304 | tig0035090:+25879 | Msa1454290:CDS |
| CTAGGAGCCATGGATTGAGA+CGG | 0.641002 | tig0035090:-26161 | Msa1454290:intergenic |
| ACCATCAGGAGCTTCTCCAG+TGG | 0.641015 | tig0035090:-24575 | Msa1454290:intergenic |
| ATTTGTCCGATCCACATGGT+AGG | 0.641689 | tig0035090:+25568 | Msa1454290:CDS |
| AGTTCAATCAAGGCTCCGAA+AGG | 0.642069 | tig0035090:-26744 | Msa1454290:intergenic |
| GCTTACAGAGCTGCAACTGG+AGG | 0.643603 | tig0035090:+26065 | Msa1454290:CDS |
| TGGTGGTGGTGGAGCCACGG+AGG | 0.644740 | tig0035090:-23945 | Msa1454290:intergenic |
| CAATTTCAACAAAAGTCAAG+TGG | 0.647060 | tig0035090:+25177 | Msa1454290:CDS |
| GAGCTTTGTCGGTTGGACGA+GGG | 0.650315 | tig0035090:-24093 | Msa1454290:intergenic |
| TCTGCTAGAAGGGATTGCTG+TGG | 0.651270 | tig0035090:-25943 | Msa1454290:intergenic |
| TCAACCTGGAACTACAAGGG+TGG | 0.652554 | tig0035090:+25533 | Msa1454290:CDS |
| TGTTGAGGTTGCGGTTGCTG+CGG | 0.654132 | tig0035090:-25708 | Msa1454290:intergenic |
| GTGTTGGTGGTATTGGACAG+AGG | 0.654498 | tig0035090:+24872 | Msa1454290:CDS |
| GAGCCATGGATTGAGACGGA+TGG | 0.658971 | tig0035090:-26157 | Msa1454290:intergenic |
| CGGTTGGACGAGGGACGATG+TGG | 0.660936 | tig0035090:-24084 | Msa1454290:intergenic |
| AGTTGCAGCTCTGTAAGCAG+CGG | 0.662401 | tig0035090:-26060 | Msa1454290:intergenic |
| GTTGGCACTGGAGGATGAGG+CGG | 0.662967 | tig0035090:-24928 | Msa1454290:intergenic |
| GGTTGAACTTGAACAACCTG+TGG | 0.669833 | tig0035090:-25084 | Msa1454290:intergenic |
| GAATCGGGGTAGTTGAGGTG+TGG | 0.676463 | tig0035090:-23965 | Msa1454290:intergenic |
| TTTCAACAAAAGTCAAGTGG+CGG | 0.678298 | tig0035090:+25180 | Msa1454290:CDS |
| AATTCAACCTGGAACTACAA+GGG | 0.679111 | tig0035090:+25530 | Msa1454290:CDS |
| AGGGTGCATGTTGAAGATGG+TGG | 0.679137 | tig0035090:+24739 | Msa1454290:CDS |
| TTTCATTTCATCGATCATGG+AGG | 0.692878 | tig0035090:+23880 | Msa1454290:exon |
| TTGAACAACCTGTGGCTGAG+GGG | 0.694336 | tig0035090:-25076 | Msa1454290:intergenic |
| CGGACCACCGTTATCCTCCG+TGG | 0.696266 | tig0035090:+23931 | Msa1454290:CDS |
| CAGCAGCAGTTTATTCATGG+GGG | 0.698822 | tig0035090:+25768 | Msa1454290:CDS |
| GCCTTCACAGTACCAGACCA+TGG | 0.702903 | tig0035090:+26265 | Msa1454290:CDS |
| GTAGGATCGAGAATTTGCGG+TGG | 0.710077 | tig0035090:-24403 | Msa1454290:intergenic |
| CGTCTGATGTGCAGTTACGG+CGG | 0.713858 | tig0035090:+24061 | Msa1454290:CDS |
| ACTTGCTTATAGTGGCTGTG+AGG | 0.735355 | tig0035090:-26360 | Msa1454280:intergenic |
| GGAGCCACGGAGGATAACGG+TGG | 0.735804 | tig0035090:-23935 | Msa1454280:intergenic |
| TGCACCTGGATCCTACCATG+TGG | 0.740835 | tig0035090:-25579 | Msa1454280:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAAATGTTTGTTTACAT+AGG | + | tig0035090:25307-25326 | Msa1454290:intron | 15.0% |
| !!! | AAGAAACAATTTTGAAAAAT+TGG | + | tig0035090:26389-26408 | Msa1454290:three_prime_UTR | 15.0% |
| !! | GAAATGAAATGAATAATAAC+TGG | - | tig0035090:23864-23883 | Msa1454290:intergenic | 20.0% |
| !!! | CATATTTTCTAAATCTTCAT+CGG | - | tig0035090:24281-24300 | Msa1454290:intergenic | 20.0% |
| !!! | TCTGTTTTATATTTGTGATA+TGG | + | tig0035090:25280-25299 | Msa1454290:intron | 20.0% |
| !!! | ACAATTTTGAAAAATTGGTT+TGG | + | tig0035090:26394-26413 | Msa1454290:three_prime_UTR | 20.0% |
| !! | CTGCATATATAAAACATAAA+AGG | - | tig0035090:26423-26442 | Msa1454290:intergenic | 20.0% |
| !! | TCTTGTATTTCATAATTCAT+AGG | + | tig0035090:26529-26548 | Msa1454290:three_prime_UTR | 20.0% |
| !! | TATTTCATAATTCATAGGAA+AGG | + | tig0035090:26534-26553 | Msa1454290:three_prime_UTR | 20.0% |
| !! | AATTATATGACAATCATTTC+AGG | - | tig0035090:26634-26653 | Msa1454290:intergenic | 20.0% |
| !!! | ATGATTGTCATATAATTTTG+CGG | + | tig0035090:26637-26656 | Msa1454290:three_prime_UTR | 20.0% |
| ! | AAATAAAAGGACGAAAAAGA+GGG | - | tig0035090:23783-23802 | Msa0230960:intergenic | 25.0% |
| ! | AAACAGAGAATTACAAAAAC+AGG | - | tig0035090:25267-25286 | Msa1454290:intergenic | 25.0% |
| ! | TGATTATTATAAACCTAGAG+TGG | + | tig0035090:25392-25411 | Msa1454290:intron | 25.0% |
| ! | ATTTGCTCTTGATAAATAAC+AGG | - | tig0035090:25507-25526 | Msa1454290:intergenic | 25.0% |
| ! | AGAAATATTGTAACCTTGTT+GGG | - | tig0035090:25895-25914 | Msa1454290:intergenic | 25.0% |
| !!! | TTTTATGAACTTGCTTATAG+TGG | - | tig0035090:26371-26390 | Msa1454290:intergenic | 25.0% |
| !!! | ACACAGTTTCTTATTTTCTA+TGG | - | tig0035090:26493-26512 | Msa1454290:intergenic | 25.0% |
| ! | TAATTCATAGGAAAGGAAAT+CGG | + | tig0035090:26541-26560 | Msa1454290:three_prime_UTR | 25.0% |
| ! | CTTATACAGTATAATAACCT+TGG | - | tig0035090:26568-26587 | Msa1454290:intergenic | 25.0% |
| !! | TGATTGTCATATAATTTTGC+GGG | + | tig0035090:26638-26657 | Msa1454290:three_prime_UTR | 25.0% |
| GAAATAAAAGGACGAAAAAG+AGG | - | tig0035090:23784-23803 | Msa0230960:intergenic | 30.0% | |
| TCATTTCATTTCATCGATCA+TGG | + | tig0035090:23877-23896 | Msa1454290:exon | 30.0% | |
| ! | TAAATCTTCATCGGTTGAAA+CGG | - | tig0035090:24272-24291 | Msa1454290:intergenic | 30.0% |
| TGGTTCTTTGATACCATAAA+CGG | + | tig0035090:24442-24461 | Msa1454290:CDS | 30.0% | |
| ! | TCTTCTGTGAATCATCTTTT+AGG | + | tig0035090:24508-24527 | Msa1454290:CDS | 30.0% |
| GGGAATAATCATATTGAACA+AGG | + | tig0035090:24550-24569 | Msa1454290:CDS | 30.0% | |
| ! | GAATTGTAAGAATTTGAAGC+AGG | + | tig0035090:24621-24640 | Msa1454290:CDS | 30.0% |
| ! | CTTGACTTTTGTTGAAATTG+AGG | - | tig0035090:25177-25196 | Msa1454290:intergenic | 30.0% |
| CAATTTCAACAAAAGTCAAG+TGG | + | tig0035090:25177-25196 | Msa1454290:CDS | 30.0% | |
| GAATTACAAAAACAGGCAAA+TGG | - | tig0035090:25260-25279 | Msa1454290:intergenic | 30.0% | |
| TTATTATAAACCTAGAGTGG+TGG | + | tig0035090:25395-25414 | Msa1454290:intron | 30.0% | |
| ! | GGTTTAGCAATATCTGAAAT+AGG | + | tig0035090:25416-25435 | Msa1454290:intron | 30.0% |
| !! | CAATATCTGAAATAGGCTTT+TGG | + | tig0035090:25423-25442 | Msa1454290:intron | 30.0% |
| GAAATATTGTAACCTTGTTG+GGG | - | tig0035090:25894-25913 | Msa1454290:intergenic | 30.0% | |
| CAGAAATATTGTAACCTTGT+TGG | - | tig0035090:25896-25915 | Msa1454290:intergenic | 30.0% | |
| AGCATATTCATAAGCATAAC+TGG | - | tig0035090:26201-26220 | Msa1454290:intergenic | 30.0% | |
| TTTATATATGCAGTTCTCGT+TGG | + | tig0035090:26430-26449 | Msa1454290:three_prime_UTR | 30.0% | |
| TTATATATGCAGTTCTCGTT+GGG | + | tig0035090:26431-26450 | Msa1454290:three_prime_UTR | 30.0% | |
| ! | TTTTGCAGCGCAGAAATAAA+AGG | - | tig0035090:23796-23815 | Msa0230960:intergenic | 35.0% |
| !! | TTTATTTCTGCGCTGCAAAA+AGG | + | tig0035090:23796-23815 | Msa1454290:five_prime_UTR | 35.0% |
| !! | TTATTTCTGCGCTGCAAAAA+GGG | + | tig0035090:23797-23816 | Msa1454290:five_prime_UTR | 35.0% |
| TTTCATTTCATCGATCATGG+AGG | + | tig0035090:23880-23899 | Msa1454290:exon | 35.0% | |
| ! | TCTTCCATTAAGCAAGGTTT+TGG | - | tig0035090:24197-24216 | Msa1454290:intergenic | 35.0% |
| AGCTGATACTTGAAAGTGAA+AGG | - | tig0035090:24220-24239 | Msa1454290:intergenic | 35.0% | |
| AAACGGAGATTAACGAATCT+AGG | - | tig0035090:24255-24274 | Msa1454290:intergenic | 35.0% | |
| ACCTCGATTAAGAGATGATA+CGG | - | tig0035090:24470-24489 | Msa1454290:intergenic | 35.0% | |
| ! | TTTCTCAACCTGGATCTTTT+GGG | + | tig0035090:24599-24618 | Msa1454290:CDS | 35.0% |
| TTACAATTCCCAAAAGATCC+AGG | - | tig0035090:24610-24629 | Msa1454290:intergenic | 35.0% | |
| ! | TGATGAACAGTTTGCTCAAA+TGG | + | tig0035090:24843-24862 | Msa1454290:CDS | 35.0% |
| !! | TTGTTGGTGATTACCAGAAT+AGG | + | tig0035090:24992-25011 | Msa1454290:CDS | 35.0% |
| !! | TGTTGGTGATTACCAGAATA+GGG | + | tig0035090:24993-25012 | Msa1454290:CDS | 35.0% |
| ! | ATTCTCTGATGATGAGAGAT+CGG | + | tig0035090:25017-25036 | Msa1454290:CDS | 35.0% |
| TTTCAACAAAAGTCAAGTGG+CGG | + | tig0035090:25180-25199 | Msa1454290:CDS | 35.0% | |
| !! | TATCTGAAATAGGCTTTTGG+TGG | + | tig0035090:25426-25445 | Msa1454290:intron | 35.0% |
| GAGCAAATTCAAATTCAACC+TGG | + | tig0035090:25519-25538 | Msa1454290:CDS | 35.0% | |
| AAATTCAACCTGGAACTACA+AGG | + | tig0035090:25529-25548 | Msa1454290:CDS | 35.0% | |
| AATTCAACCTGGAACTACAA+GGG | + | tig0035090:25530-25549 | Msa1454290:CDS | 35.0% | |
| GATAGTATGTAGGAATTGCA+GGG | - | tig0035090:25812-25831 | Msa1454290:intergenic | 35.0% | |
| GGATATACAGGATAGTATGT+AGG | - | tig0035090:25822-25841 | Msa1454290:intergenic | 35.0% | |
| TACATAGTAAACCTGGTGAT+GGG | - | tig0035090:25859-25878 | Msa1454290:intergenic | 35.0% | |
| ! | TTACAATATTTCTGTGCAGC+AGG | + | tig0035090:25902-25921 | Msa1454290:CDS | 35.0% |
| ! | TTTTGTTGAACCAATGTGGT+GGG | - | tig0035090:25987-26006 | Msa1454290:intergenic | 35.0% |
| ! | ATTTTGTTGAACCAATGTGG+TGG | - | tig0035090:25988-26007 | Msa1454290:intergenic | 35.0% |
| ! | TGCATTTTGTTGAACCAATG+TGG | - | tig0035090:25991-26010 | Msa1454290:intergenic | 35.0% |
| ATTCATAAGCATAACTGGCA+GGG | - | tig0035090:26196-26215 | Msa1454290:intergenic | 35.0% | |
| TATTCATAAGCATAACTGGC+AGG | - | tig0035090:26197-26216 | Msa1454290:intergenic | 35.0% | |
| TGAGAATAGTATACTTGAGC+AGG | - | tig0035090:26227-26246 | Msa1454290:intergenic | 35.0% | |
| AGTATACTATTCTCAGCCTA+TGG | + | tig0035090:26232-26251 | Msa1454290:CDS | 35.0% | |
| TTGACATGGTGTATGATTCA+TGG | + | tig0035090:26671-26690 | Msa1454290:three_prime_UTR | 35.0% | |
| TTCTTGTTGACGAGTTCAAT+TGG | + | tig0035090:26715-26734 | Msa1454290:three_prime_UTR | 35.0% | |
| TCAAGATGCTAGTTCAATCA+AGG | - | tig0035090:26757-26776 | Msa1454290:intergenic | 35.0% | |
| ! | TATTTCTGCGCTGCAAAAAG+GGG | + | tig0035090:23798-23817 | Msa1454290:five_prime_UTR | 40.0% |
| !!! | CATTAAGCAAGGTTTTGGAG+AGG | - | tig0035090:24192-24211 | Msa1454290:intergenic | 40.0% |
| CTCTCCAAAACCTTGCTTAA+TGG | + | tig0035090:24190-24209 | Msa1454290:CDS | 40.0% | |
| GAAAGGTCTTCCATTAAGCA+AGG | - | tig0035090:24203-24222 | Msa1454290:intergenic | 40.0% | |
| AACGAATCTAGGTCTTCGTT+TGG | - | tig0035090:24244-24263 | Msa1454290:intergenic | 40.0% | |
| AGAAAAAGACGAATTCGCGA+GGG | - | tig0035090:24349-24368 | Msa1454290:intergenic | 40.0% | |
| ACAGTAGGATCGAGAATTTG+CGG | - | tig0035090:24409-24428 | Msa1454290:intergenic | 40.0% | |
| GGTATCAAAGAACCATTCAC+CGG | - | tig0035090:24437-24456 | Msa1454290:intergenic | 40.0% | |
| !! | GTCTTGATGATGATGTTGCT+GGG | + | tig0035090:24530-24549 | Msa1454290:CDS | 40.0% |
| CATATTGAACAAGGTTCCAC+TGG | + | tig0035090:24559-24578 | Msa1454290:CDS | 40.0% | |
| ! | GTTTCTCAACCTGGATCTTT+TGG | + | tig0035090:24598-24617 | Msa1454290:CDS | 40.0% |
| TCTTCAACATGCACCCTAAT+AGG | - | tig0035090:24736-24755 | Msa1454290:intergenic | 40.0% | |
| ATTAGGGTGCATGTTGAAGA+TGG | + | tig0035090:24736-24755 | Msa1454290:CDS | 40.0% | |
| ! | CAGTTTGCTCAAATGGTTGT+TGG | + | tig0035090:24850-24869 | Msa1454290:CDS | 40.0% |
| CATCAGAGAATACCCTATTC+TGG | - | tig0035090:25008-25027 | Msa1454290:intergenic | 40.0% | |
| ! | TGAGCTTGATTTTGAGCTTG+AGG | - | tig0035090:25108-25127 | Msa1454290:intergenic | 40.0% |
| CTTGAAACTGAATCAGGAGA+AGG | - | tig0035090:25219-25238 | Msa1454290:intergenic | 40.0% | |
| CTTCTCCTGATTCAGTTTCA+AGG | + | tig0035090:25217-25236 | Msa1454290:CDS | 40.0% | |
| GCAAACCTTGAAACTGAATC+AGG | - | tig0035090:25225-25244 | Msa1454290:intergenic | 40.0% | |
| TATTGCTAAACCACCACTCT+AGG | - | tig0035090:25408-25427 | Msa1454290:intergenic | 40.0% | |
| ATCAATTTGTCCGATCCACA+TGG | + | tig0035090:25564-25583 | Msa1454290:CDS | 40.0% | |
| AGCAGCAGCAGTTTATTCAT+GGG | + | tig0035090:25766-25785 | Msa1454290:CDS | 40.0% | |
| GGATAGTATGTAGGAATTGC+AGG | - | tig0035090:25813-25832 | Msa1454290:intergenic | 40.0% | |
| !! | TGTTGCTGTGATGGATATAC+AGG | - | tig0035090:25834-25853 | Msa1454290:intergenic | 40.0% |
| ! | ACATAGTAAACCTGGTGATG+GGG | - | tig0035090:25858-25877 | Msa1454290:intergenic | 40.0% |
| GTACATAGTAAACCTGGTGA+TGG | - | tig0035090:25860-25879 | Msa1454290:intergenic | 40.0% | |
| TTGCAGGTACATAGTAAACC+TGG | - | tig0035090:25866-25885 | Msa1454290:intergenic | 40.0% | |
| TTTGTTGAACCAATGTGGTG+GGG | - | tig0035090:25986-26005 | Msa1454290:intergenic | 40.0% | |
| !!! | GTCATTTCAGTTTTGGGTAG+GGG | - | tig0035090:26038-26057 | Msa1454290:intergenic | 40.0% |
| !!! | CGTCATTTCAGTTTTGGGTA+GGG | - | tig0035090:26039-26058 | Msa1454290:intergenic | 40.0% |
| CCTACCCAAAACTGAAATGA+CGG | + | tig0035090:26037-26056 | Msa1454290:CDS | 40.0% | |
| GTAGGAACTTGCACAAATTG+AGG | - | tig0035090:26095-26114 | Msa1454290:intergenic | 40.0% | |
| TTCATAAGCATAACTGGCAG+GGG | - | tig0035090:26195-26214 | Msa1454290:intergenic | 40.0% | |
| GGCAAATACATACCACAAAC+AGG | - | tig0035090:26472-26491 | Msa1454290:intergenic | 40.0% | |
| GGTGTATGATTCATGGCTAT+TGG | + | tig0035090:26678-26697 | Msa1454290:three_prime_UTR | 40.0% | |
| TTGACGAGTTCAATTGGATG+TGG | + | tig0035090:26721-26740 | Msa1454290:three_prime_UTR | 40.0% | |
| TTCAATTGGATGTGGCCTTT+CGG | + | tig0035090:26729-26748 | Msa1454290:three_prime_UTR | 40.0% | |
| TACTCACAAGTGCAAACTTG+TGG | - | tig0035090:26808-26827 | Msa1454290:intergenic | 40.0% | |
| !!! | TTTTGTGCTGCTTGTTGCTG+CGG | - | tig0035090:23829-23848 | Msa1454290:intergenic | 45.0% |
| ! | TAACAGAGAGCTTTGTCGGT+TGG | - | tig0035090:24103-24122 | Msa1454290:intergenic | 45.0% |
| ! | GACGTAACAGAGAGCTTTGT+CGG | - | tig0035090:24107-24126 | Msa1454290:intergenic | 45.0% |
| GACAAAGCTCTCTGTTACGT+CGG | + | tig0035090:24106-24125 | Msa1454290:CDS | 45.0% | |
| CAGAAAAAGACGAATTCGCG+AGG | - | tig0035090:24350-24369 | Msa1454290:intergenic | 45.0% | |
| ! | TGAGCAGATTCAGGTTTCGA+TGG | - | tig0035090:24376-24395 | Msa1454290:intergenic | 45.0% |
| GGAATTGACTGAGCAGATTC+AGG | - | tig0035090:24385-24404 | Msa1454290:intergenic | 45.0% | |
| CTCGATCCTACTGTTAGATC+CGG | + | tig0035090:24415-24434 | Msa1454290:CDS | 45.0% | |
| CATTCACCGGATCTAACAGT+AGG | - | tig0035090:24424-24443 | Msa1454290:intergenic | 45.0% | |
| CTACTGTTAGATCCGGTGAA+TGG | + | tig0035090:24422-24441 | Msa1454290:CDS | 45.0% | |
| AGATGATACGGCACCGTTTA+TGG | - | tig0035090:24458-24477 | Msa1454290:intergenic | 45.0% | |
| GCCGTATCATCTCTTAATCG+AGG | + | tig0035090:24466-24485 | Msa1454290:CDS | 45.0% | |
| !! | GGTCTTGATGATGATGTTGC+TGG | + | tig0035090:24529-24548 | Msa1454290:CDS | 45.0% |
| ! | TGTTCCTGATTCGCCTATGA+TGG | + | tig0035090:24654-24673 | Msa1454290:CDS | 45.0% |
| GACGAAGAAGTCTCCATCAT+AGG | - | tig0035090:24670-24689 | Msa1454290:intergenic | 45.0% | |
| ATGGAGACTTCTTCGTCCTT+TGG | + | tig0035090:24673-24692 | Msa1454290:CDS | 45.0% | |
| AGACGAAGAAGTCGAACCAA+AGG | - | tig0035090:24692-24711 | Msa1454290:intergenic | 45.0% | |
| TGGCGAATTTGCCTCCTATT+AGG | + | tig0035090:24719-24738 | Msa1454290:CDS | 45.0% | |
| GGCGAATTTGCCTCCTATTA+GGG | + | tig0035090:24720-24739 | Msa1454290:CDS | 45.0% | |
| TCAACATGCACCCTAATAGG+AGG | - | tig0035090:24733-24752 | Msa1454290:intergenic | 45.0% | |
| ! | CATGTTGAAGATGGTGGTTC+TGG | + | tig0035090:24745-24764 | Msa1454290:CDS | 45.0% |
| ! | CAGCAGGATCAGAAGGTTTT+GGG | + | tig0035090:24817-24836 | Msa1454290:CDS | 45.0% |
| ! | AGCAGGATCAGAAGGTTTTG+GGG | + | tig0035090:24818-24837 | Msa1454290:CDS | 45.0% |
| GCTCAAATGGTTGTTGGTGT+TGG | + | tig0035090:24856-24875 | Msa1454290:CDS | 45.0% | |
| !! | CAAATGGTTGTTGGTGTTGG+TGG | + | tig0035090:24859-24878 | Msa1454290:CDS | 45.0% |
| !! | GTTGTTGGTGTTGGTGGTAT+TGG | + | tig0035090:24865-24884 | Msa1454290:CDS | 45.0% |
| !! | TGTTCCAATTGGTTCTGCTG+TGG | + | tig0035090:24969-24988 | Msa1454290:CDS | 45.0% |
| ACAACCACAGCAGAACCAAT+TGG | - | tig0035090:24976-24995 | Msa1454290:intergenic | 45.0% | |
| !! | ATTGGTTCTGCTGTGGTTGT+TGG | + | tig0035090:24976-24995 | Msa1454290:CDS | 45.0% |
| GATGATGAGAGATCGGATCA+TGG | + | tig0035090:25024-25043 | Msa1454290:CDS | 45.0% | |
| ! | GGTGGTTTTCTATATCCCAC+AGG | - | tig0035090:25054-25073 | Msa1454290:intergenic | 45.0% |
| GGTTGAACTTGAACAACCTG+TGG | - | tig0035090:25087-25106 | Msa1454290:intergenic | 45.0% | |
| TCAAGCTCAAACCCAAACTC+AGG | + | tig0035090:25119-25138 | Msa1454290:CDS | 45.0% | |
| TTGTGACTGTGCCTGAGTTT+GGG | - | tig0035090:25133-25152 | Msa1454290:intergenic | 45.0% | |
| ATTTGTCCGATCCACATGGT+AGG | + | tig0035090:25568-25587 | Msa1454290:CDS | 45.0% | |
| TGCTGTTGCAGCAAATAACC+AGG | - | tig0035090:25621-25640 | Msa1454290:intergenic | 45.0% | |
| ! | CATATTGTTGTTGCTGCTGC+TGG | - | tig0035090:25653-25672 | Msa1454290:intergenic | 45.0% |
| CAGCAGCAGCAGTTTATTCA+TGG | + | tig0035090:25765-25784 | Msa1454290:CDS | 45.0% | |
| GCAGCAGCAGTTTATTCATG+GGG | + | tig0035090:25767-25786 | Msa1454290:CDS | 45.0% | |
| CAGCAGCAGTTTATTCATGG+GGG | + | tig0035090:25768-25787 | Msa1454290:CDS | 45.0% | |
| TTCTGTGCAGCAGGCTAATA+TGG | + | tig0035090:25911-25930 | Msa1454290:CDS | 45.0% | |
| TCTGTGCAGCAGGCTAATAT+GGG | + | tig0035090:25912-25931 | Msa1454290:CDS | 45.0% | |
| !!! | GATTTTGGGGTCTGCTAGAA+GGG | - | tig0035090:25956-25975 | Msa1454290:intergenic | 45.0% |
| !!! | CCGTCATTTCAGTTTTGGGT+AGG | - | tig0035090:26040-26059 | Msa1454290:intergenic | 45.0% |
| !! | TGCTGTTGATGCTGACTTGT+AGG | - | tig0035090:26113-26132 | Msa1454290:intergenic | 45.0% |
| !! | TGGTACTGTGAAGGCATTGT+GGG | - | tig0035090:26260-26279 | Msa1454290:intergenic | 45.0% |
| AGCTGCTACTATGATGCAAC+CGG | + | tig0035090:26289-26308 | Msa1454290:CDS | 45.0% | |
| ACTTGCTTATAGTGGCTGTG+AGG | - | tig0035090:26363-26382 | Msa1454290:intergenic | 45.0% | |
| ! | TCGTGTTTGCTACCTGTTTG+TGG | + | tig0035090:26457-26476 | Msa1454290:three_prime_UTR | 45.0% |
| TAGGAAAGGAAATCGGTCCA+AGG | + | tig0035090:26548-26567 | Msa1454290:three_prime_UTR | 45.0% | |
| ! | CGGGTCATTGTTTCTTGACA+TGG | + | tig0035090:26657-26676 | Msa1454290:three_prime_UTR | 45.0% |
| AGTTCAATCAAGGCTCCGAA+AGG | - | tig0035090:26747-26766 | Msa1454290:intergenic | 45.0% | |
| AGGGGAGGAATCAACGGAAT+CGG | - | tig0035090:23984-24003 | Msa1454290:intergenic | 50.0% | |
| TTCCCGCAACAACGACTCAT+GGG | + | tig0035090:24006-24025 | Msa1454290:CDS | 50.0% | |
| CATCAGACGGAGTTTGGATG+TGG | - | tig0035090:24050-24069 | Msa1454290:intergenic | 50.0% | |
| ACTGCACATCAGACGGAGTT+TGG | - | tig0035090:24056-24075 | Msa1454290:intergenic | 50.0% | |
| CTCCGTCTGATGTGCAGTTA+CGG | + | tig0035090:24058-24077 | Msa1454290:CDS | 50.0% | |
| AAAGCTCTCTGTTACGTCGG+TGG | + | tig0035090:24109-24128 | Msa1454290:CDS | 50.0% | |
| GTAGGATCGAGAATTTGCGG+TGG | - | tig0035090:24406-24425 | Msa1454290:intergenic | 50.0% | |
| ! | CCAGGTTGAGAAACACCATC+AGG | - | tig0035090:24592-24611 | Msa1454290:intergenic | 50.0% |
| ! | CCTGATGGTGTTTCTCAACC+TGG | + | tig0035090:24589-24608 | Msa1454290:CDS | 50.0% |
| GTCTCCATCATAGGCGAATC+AGG | - | tig0035090:24661-24680 | Msa1454290:intergenic | 50.0% | |
| GACTTCTTCGTCTCCGTCTT+TGG | + | tig0035090:24699-24718 | Msa1454290:CDS | 50.0% | |
| GGAGGCAAATTCGCCAAAGA+CGG | - | tig0035090:24715-24734 | Msa1454290:intergenic | 50.0% | |
| AGGGTGCATGTTGAAGATGG+TGG | + | tig0035090:24739-24758 | Msa1454290:CDS | 50.0% | |
| !! | GTTGAAGATGGTGGTTCTGG+TGG | + | tig0035090:24748-24767 | Msa1454290:CDS | 50.0% |
| !! | ATGGTGGTTCTGGTGGTGTT+AGG | + | tig0035090:24755-24774 | Msa1454290:CDS | 50.0% |
| !! | TGGTGGTTCTGGTGGTGTTA+GGG | + | tig0035090:24756-24775 | Msa1454290:CDS | 50.0% |
| ! | GCAGCAGGATCAGAAGGTTT+TGG | + | tig0035090:24816-24835 | Msa1454290:CDS | 50.0% |
| !! | GTGTTGGTGGTATTGGACAG+AGG | + | tig0035090:24872-24891 | Msa1454290:CDS | 50.0% |
| ! | TGGTATTGGACAGAGGCTAC+AGG | + | tig0035090:24879-24898 | Msa1454290:CDS | 50.0% |
| TTGAACAACCTGTGGCTGAG+GGG | - | tig0035090:25079-25098 | Msa1454290:intergenic | 50.0% | |
| CTTGAACAACCTGTGGCTGA+GGG | - | tig0035090:25080-25099 | Msa1454290:intergenic | 50.0% | |
| ACTTGAACAACCTGTGGCTG+AGG | - | tig0035090:25081-25100 | Msa1454290:intergenic | 50.0% | |
| CTTGTGACTGTGCCTGAGTT+TGG | - | tig0035090:25134-25153 | Msa1454290:intergenic | 50.0% | |
| CAACAAAAGTCAAGTGGCGG+TGG | + | tig0035090:25183-25202 | Msa1454290:CDS | 50.0% | |
| TCAACCTGGAACTACAAGGG+TGG | + | tig0035090:25533-25552 | Msa1454290:CDS | 50.0% | |
| GTATCCACCCTTGTAGTTCC+AGG | - | tig0035090:25540-25559 | Msa1454290:intergenic | 50.0% | |
| CTGGATCCTACCATGTGGAT+CGG | - | tig0035090:25577-25596 | Msa1454290:intergenic | 50.0% | |
| CAGCAACATGTACAGGATCC+TGG | + | tig0035090:25600-25619 | Msa1454290:CDS | 50.0% | |
| TGAAGCTGTTGTTGCTGCTG+CGG | - | tig0035090:25738-25757 | Msa1454290:intergenic | 50.0% | |
| TCTGCTAGAAGGGATTGCTG+TGG | - | tig0035090:25946-25965 | Msa1454290:intergenic | 50.0% | |
| !!! | GGATTTTGGGGTCTGCTAGA+AGG | - | tig0035090:25957-25976 | Msa1454290:intergenic | 50.0% |
| ! | GTGGGGTTTGGAGGATTTTG+GGG | - | tig0035090:25969-25988 | Msa1454290:intergenic | 50.0% |
| ! | GGTGGGGTTTGGAGGATTTT+GGG | - | tig0035090:25970-25989 | Msa1454290:intergenic | 50.0% |
| ! | TGGTGGGGTTTGGAGGATTT+TGG | - | tig0035090:25971-25990 | Msa1454290:intergenic | 50.0% |
| ! | TGAACCAATGTGGTGGGGTT+TGG | - | tig0035090:25981-26000 | Msa1454290:intergenic | 50.0% |
| !! | GTAGGGGAGCACTTCTAATG+GGG | - | tig0035090:26022-26041 | Msa1454290:intergenic | 50.0% |
| !! | GGTAGGGGAGCACTTCTAAT+GGG | - | tig0035090:26023-26042 | Msa1454290:intergenic | 50.0% |
| ! | GCGGCCGTCATTTCAGTTTT+GGG | - | tig0035090:26044-26063 | Msa1454290:intergenic | 50.0% |
| ! | AGCGGCCGTCATTTCAGTTT+TGG | - | tig0035090:26045-26064 | Msa1454290:intergenic | 50.0% |
| AGTTGCAGCTCTGTAAGCAG+CGG | - | tig0035090:26063-26082 | Msa1454290:intergenic | 50.0% | |
| ! | CTAGGAGCCATGGATTGAGA+CGG | - | tig0035090:26164-26183 | Msa1454290:intergenic | 50.0% |
| !! | CTGGTACTGTGAAGGCATTG+TGG | - | tig0035090:26261-26280 | Msa1454290:intergenic | 50.0% |
| CATCATAGTAGCAGCTGCCA+TGG | - | tig0035090:26285-26304 | Msa1454290:intergenic | 50.0% | |
| ! | GATAACGGTGGTCCGGTTGA+CGG | - | tig0035090:23926-23945 | Msa1454290:intergenic | 55.0% |
| !! | TAGTTGAGGTGTGGTGGTGG+TGG | - | tig0035090:23959-23978 | Msa1454290:intergenic | 55.0% |
| GAATCGGGGTAGTTGAGGTG+TGG | - | tig0035090:23968-23987 | Msa1454290:intergenic | 55.0% | |
| CAACGGAATCGGGGTAGTTG+AGG | - | tig0035090:23973-23992 | Msa1454290:intergenic | 55.0% | |
| GGGAGGAATCAACGGAATCG+GGG | - | tig0035090:23982-24001 | Msa1454290:intergenic | 55.0% | |
| GGGGAGGAATCAACGGAATC+GGG | - | tig0035090:23983-24002 | Msa1454290:intergenic | 55.0% | |
| GGAACGAGGGGAGGAATCAA+CGG | - | tig0035090:23990-24009 | Msa1454290:intergenic | 55.0% | |
| AGTCGTTGTTGCGGGAACGA+GGG | - | tig0035090:24003-24022 | Msa1454290:intergenic | 55.0% | |
| GTTCCCGCAACAACGACTCA+TGG | + | tig0035090:24005-24024 | Msa1454290:CDS | 55.0% | |
| GTCCCATGAGTCGTTGTTGC+GGG | - | tig0035090:24011-24030 | Msa1454290:intergenic | 55.0% | |
| CGTCCCATGAGTCGTTGTTG+CGG | - | tig0035090:24012-24031 | Msa1454290:intergenic | 55.0% | |
| TTGGATGTGGCTGGAGGGAA+AGG | - | tig0035090:24037-24056 | Msa1454290:intergenic | 55.0% | |
| GGAGTTTGGATGTGGCTGGA+GGG | - | tig0035090:24042-24061 | Msa1454290:intergenic | 55.0% | |
| AGACGGAGTTTGGATGTGGC+TGG | - | tig0035090:24046-24065 | Msa1454290:intergenic | 55.0% | |
| CGCCGTAACTGCACATCAGA+CGG | - | tig0035090:24063-24082 | Msa1454290:intergenic | 55.0% | |
| CGTCTGATGTGCAGTTACGG+CGG | + | tig0035090:24061-24080 | Msa1454290:CDS | 55.0% | |
| ! | GAGCTTTGTCGGTTGGACGA+GGG | - | tig0035090:24096-24115 | Msa1454290:intergenic | 55.0% |
| ! | AGAGCTTTGTCGGTTGGACG+AGG | - | tig0035090:24097-24116 | Msa1454290:intergenic | 55.0% |
| GGATAAATCCGCGAGTGAGG+TGG | - | tig0035090:24164-24183 | Msa1454290:intergenic | 55.0% | |
| CGTGGATAAATCCGCGAGTG+AGG | - | tig0035090:24167-24186 | Msa1454290:intergenic | 55.0% | |
| TCCACTGGAGAAGCTCCTGA+TGG | + | tig0035090:24574-24593 | Msa1454290:CDS | 55.0% | |
| ACCATCAGGAGCTTCTCCAG+TGG | - | tig0035090:24578-24597 | Msa1454290:intergenic | 55.0% | |
| TGGACAGAGGCTACAGGATG+AGG | + | tig0035090:24885-24904 | Msa1454290:CDS | 55.0% | |
| GGACAGAGGCTACAGGATGA+GGG | + | tig0035090:24886-24905 | Msa1454290:CDS | 55.0% | |
| ! | GTAGTTGGCACTGGAGGATG+AGG | - | tig0035090:24934-24953 | Msa1454290:intergenic | 55.0% |
| ATCGGATCATGGTGTGCCTG+TGG | + | tig0035090:25035-25054 | Msa1454290:CDS | 55.0% | |
| TCGGATCATGGTGTGCCTGT+GGG | + | tig0035090:25036-25055 | Msa1454290:CDS | 55.0% | |
| AAAGTCAAGTGGCGGTGGCT+CGG | + | tig0035090:25188-25207 | Msa1454290:CDS | 55.0% | |
| CGATCCACATGGTAGGATCC+AGG | + | tig0035090:25575-25594 | Msa1454290:CDS | 55.0% | |
| TGCACCTGGATCCTACCATG+TGG | - | tig0035090:25582-25601 | Msa1454290:intergenic | 55.0% | |
| CCTGTACATGTTGCTGCACC+TGG | - | tig0035090:25596-25615 | Msa1454290:intergenic | 55.0% | |
| CCAGGTGCAGCAACATGTAC+AGG | + | tig0035090:25593-25612 | Msa1454290:CDS | 55.0% | |
| GAGGCTGTTGTTGCTGCTGA+TGG | - | tig0035090:25680-25699 | Msa1454290:intergenic | 55.0% | |
| TGTTGAGGTTGCGGTTGCTG+CGG | - | tig0035090:25711-25730 | Msa1454290:intergenic | 55.0% | |
| TGCGGCTGATGTTGAGGTTG+CGG | - | tig0035090:25720-25739 | Msa1454290:intergenic | 55.0% | |
| TGATGGGGCTGTTGCTGTGA+TGG | - | tig0035090:25843-25862 | Msa1454290:intergenic | 55.0% | |
| TCCTCCAAACCCCACCACAT+TGG | + | tig0035090:25974-25993 | Msa1454290:CDS | 55.0% | |
| ! | ACCAATGTGGTGGGGTTTGG+AGG | - | tig0035090:25978-25997 | Msa1454290:intergenic | 55.0% |
| !! | GGGTAGGGGAGCACTTCTAA+TGG | - | tig0035090:26024-26043 | Msa1454290:intergenic | 55.0% |
| GCTGCTTACAGAGCTGCAAC+TGG | + | tig0035090:26062-26081 | Msa1454290:CDS | 55.0% | |
| GCTTACAGAGCTGCAACTGG+AGG | + | tig0035090:26065-26084 | Msa1454290:CDS | 55.0% | |
| ! | CCATGGATTGAGACGGATGG+TGG | - | tig0035090:26157-26176 | Msa1454290:intergenic | 55.0% |
| CCACCATCCGTCTCAATCCA+TGG | + | tig0035090:26154-26173 | Msa1454290:CDS | 55.0% | |
| ! | GAGCCATGGATTGAGACGGA+TGG | - | tig0035090:26160-26179 | Msa1454290:intergenic | 55.0% |
| GCCTTCACAGTACCAGACCA+TGG | + | tig0035090:26265-26284 | Msa1454290:CDS | 55.0% | |
| GCCATGGTCTGGTACTGTGA+AGG | - | tig0035090:26269-26288 | Msa1454290:intergenic | 55.0% | |
| TAGTAGCAGCTGCCATGGTC+TGG | - | tig0035090:26280-26299 | Msa1454290:intergenic | 55.0% | |
| GGATGCTGTGCAGGAACTTC+CGG | - | tig0035090:26311-26330 | Msa1454290:intergenic | 55.0% | |
| ! | TGCTGCTTCATGCCGTCTGA+CGG | - | tig0035090:26332-26351 | Msa1454290:intergenic | 55.0% |
| ! | GTTGACGGCGTTGGAGGTTG+GGG | - | tig0035090:23911-23930 | Msa1454290:intergenic | 60.0% |
| ! | GGTTGACGGCGTTGGAGGTT+GGG | - | tig0035090:23912-23931 | Msa1454290:intergenic | 60.0% |
| CAACCTCCAACGCCGTCAAC+CGG | + | tig0035090:23911-23930 | Msa1454290:CDS | 60.0% | |
| ! | CACGGAGGATAACGGTGGTC+CGG | - | tig0035090:23933-23952 | Msa1454290:intergenic | 60.0% |
| GGTGGAGCCACGGAGGATAA+CGG | - | tig0035090:23941-23960 | Msa1454290:intergenic | 60.0% | |
| GGGTAGTTGAGGTGTGGTGG+TGG | - | tig0035090:23962-23981 | Msa1454290:intergenic | 60.0% | |
| TCGGGGTAGTTGAGGTGTGG+TGG | - | tig0035090:23965-23984 | Msa1454290:intergenic | 60.0% | |
| GTCGTTGTTGCGGGAACGAG+GGG | - | tig0035090:24002-24021 | Msa1454290:intergenic | 60.0% | |
| GAGTCGTTGTTGCGGGAACG+AGG | - | tig0035090:24004-24023 | Msa1454290:intergenic | 60.0% | |
| CGGAGTTTGGATGTGGCTGG+AGG | - | tig0035090:24043-24062 | Msa1454290:intergenic | 60.0% | |
| !!! | CAAGGTTTTGGAGAGGCGCG+TGG | - | tig0035090:24185-24204 | Msa1454290:intergenic | 60.0% |
| GCAGCAGCAGCAGGATCAGA+AGG | + | tig0035090:24810-24829 | Msa1454290:CDS | 60.0% | |
| ! | GTTGGCACTGGAGGATGAGG+CGG | - | tig0035090:24931-24950 | Msa1454290:intergenic | 60.0% |
| TCCTCCAGTGCCAACTACGC+TGG | + | tig0035090:24936-24955 | Msa1454290:CDS | 60.0% | |
| TCCAGTGCCAACTACGCTGG+CGG | + | tig0035090:24939-24958 | Msa1454290:CDS | 60.0% | |
| ! | GCGGCGGTTGGTGTTCCAAT+TGG | + | tig0035090:24958-24977 | Msa1454290:CDS | 60.0% |
| ACAACCTGTGGCTGAGGGGT+TGG | - | tig0035090:25075-25094 | Msa1454290:intergenic | 60.0% | |
| GGTTGCTGCGGCTGATGTTG+AGG | - | tig0035090:25699-25718 | Msa1454290:intergenic | 60.0% | |
| TGCTGCTGCGGCTGATGTTG+AGG | - | tig0035090:25726-25745 | Msa1454290:intergenic | 60.0% | |
| ACAGCAACAGCCCCATCACC+AGG | + | tig0035090:25845-25864 | Msa1454290:CDS | 60.0% | |
| CCTTGTTGGGGCTGTCTTGC+AGG | - | tig0035090:25882-25901 | Msa1454290:intergenic | 60.0% | |
| CCTGCAAGACAGCCCCAACA+AGG | + | tig0035090:25879-25898 | Msa1454290:CDS | 60.0% | |
| GGCAGCAGAACTAGGAGCCA+TGG | - | tig0035090:26174-26193 | Msa1454290:intergenic | 60.0% | |
| !! | GAAGGCATTGTGGGCGCCAT+AGG | - | tig0035090:26251-26270 | Msa1454290:intergenic | 60.0% |
| CCTGCACAGCATCCGTCAGA+CGG | + | tig0035090:26317-26336 | Msa1454290:CDS | 60.0% | |
| ! | CGGTTGACGGCGTTGGAGGT+TGG | - | tig0035090:23913-23932 | Msa1454290:intergenic | 65.0% |
| CGGACCACCGTTATCCTCCG+TGG | + | tig0035090:23931-23950 | Msa1454290:CDS | 65.0% | |
| ! | GGAGCCACGGAGGATAACGG+TGG | - | tig0035090:23938-23957 | Msa1454290:intergenic | 65.0% |
| !! | GTGTGGTGGTGGTGGAGCCA+CGG | - | tig0035090:23951-23970 | Msa1454290:intergenic | 65.0% |
| GTTGTTGCGGGAACGAGGGG+AGG | - | tig0035090:23999-24018 | Msa1454290:intergenic | 65.0% | |
| CGGTTGGACGAGGGACGATG+TGG | - | tig0035090:24087-24106 | Msa1454290:intergenic | 65.0% | |
| TGAACGCGCCACCTCACTCG+CGG | + | tig0035090:24153-24172 | Msa1454290:CDS | 65.0% | |
| ACAGCAGCAGCAGCAGCAGC+AGG | + | tig0035090:24801-24820 | Msa1454290:CDS | 65.0% | |
| ! | GCCAGCGTAGTTGGCACTGG+AGG | - | tig0035090:24940-24959 | Msa1454290:intergenic | 65.0% |
| AGTGCCAACTACGCTGGCGG+CGG | + | tig0035090:24942-24961 | Msa1454290:CDS | 65.0% | |
| ACCACCAACCCCTCAGCCAC+AGG | + | tig0035090:25068-25087 | Msa1454290:CDS | 65.0% | |
| ACCTGTGGCTGAGGGGTTGG+TGG | - | tig0035090:25072-25091 | Msa1454290:intergenic | 65.0% | |
| CTGGCAGGGGCAGCAGAACT+AGG | - | tig0035090:26182-26201 | Msa1454290:intergenic | 65.0% | |
| ! | CCGTCTGACGGATGCTGTGC+AGG | - | tig0035090:26320-26339 | Msa1454290:intergenic | 65.0% |
| ! | GGTCCGGTTGACGGCGTTGG+AGG | - | tig0035090:23917-23936 | Msa1454290:intergenic | 70.0% |
| GGTGGTCCGGTTGACGGCGT+TGG | - | tig0035090:23920-23939 | Msa1454290:intergenic | 70.0% | |
| !! | TGGTGGTGGTGGAGCCACGG+AGG | - | tig0035090:23948-23967 | Msa1454290:intergenic | 70.0% |
| GCCGCCAGCGTAGTTGGCAC+TGG | - | tig0035090:24943-24962 | Msa1454290:intergenic | 70.0% | |
| CCAACCGCCGCCAGCGTAGT+TGG | - | tig0035090:24949-24968 | Msa1454290:intergenic | 70.0% | |
| CCAACTACGCTGGCGGCGGT+TGG | + | tig0035090:24946-24965 | Msa1454290:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0035090 | gene | 23778 | 26845 | 23778 | ID=Msa1454290;Name=Msa1454290 |
| tig0035090 | mRNA | 23778 | 26845 | 23778 | ID=Msa1454290-mRNA-1;Parent=Msa1454290;Name=Msa1454290-mRNA-1;_AED=0.00;_eAED=0.00;_QI=118|1|1|1|1|1|2|469|750 |
| tig0035090 | exon | 23778 | 25238 | 23778 | ID=Msa1454290-mRNA-1:exon:19651;Parent=Msa1454290-mRNA-1 |
| tig0035090 | exon | 25467 | 26845 | 25467 | ID=Msa1454290-mRNA-1:exon:19652;Parent=Msa1454290-mRNA-1 |
| tig0035090 | five_prime_UTR | 23778 | 23895 | 23778 | ID=Msa1454290-mRNA-1:five_prime_utr;Parent=Msa1454290-mRNA-1 |
| tig0035090 | CDS | 23896 | 25238 | 23896 | ID=Msa1454290-mRNA-1:cds;Parent=Msa1454290-mRNA-1 |
| tig0035090 | CDS | 25467 | 26376 | 25467 | ID=Msa1454290-mRNA-1:cds;Parent=Msa1454290-mRNA-1 |
| tig0035090 | three_prime_UTR | 26377 | 26845 | 26377 | ID=Msa1454290-mRNA-1:three_prime_utr;Parent=Msa1454290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
