Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0932560 | sp|Q8VZT8|RT11_ARATH | 58.642 | 162 | 65 | 1 | 69 | 228 | 153 | 314 | 4.40e-65 | 207 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0932560 | I3SP73 | 94.937 | 237 | 3 | 2 | 1 | 228 | 1 | 237 | 6.22e-161 | 453 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0632930 | Msa0932560 | 0.813314 | 2.725597e-51 | -8.615850e-47 |
| Msa0169370 | Msa0932560 | 0.821915 | 3.132087e-53 | -8.615850e-47 |
| Msa0178960 | Msa0932560 | 0.802791 | 4.744138e-49 | -8.615850e-47 |
| Msa0436050 | Msa0932560 | 0.813364 | 2.657778e-51 | -8.615850e-47 |
| Msa0359030 | Msa0932560 | 0.829828 | 4.136505e-55 | -8.615850e-47 |
| Msa0932560 | Msa0994730 | 0.800098 | 1.690145e-48 | -8.615850e-47 |
| Msa0932560 | Msa1239740 | 0.804244 | 2.370985e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0932560 | MtrunA17_Chr6g0449471 | 94.937 | 237 | 3 | 2 | 1 | 228 | 1 | 237 | 1.20e-164 | 453 |
| Msa0932560 | MtrunA17_Chr2g0332561 | 84.874 | 238 | 26 | 3 | 1 | 228 | 1 | 238 | 1.50e-142 | 398 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0932560 | AT1G31817.1 | 58.642 | 162 | 65 | 1 | 69 | 228 | 153 | 314 | 4.47e-66 | 207 |
Find 60 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTACTAGGGTTTGAGATTT+GGG | 0.234267 | 6_3:-759144 | None:intergenic |
| CATTGTTGCTGCAGATTACT+AGG | 0.255446 | 6_3:-759158 | None:intergenic |
| TTGGCAGTCTGCAGCCATTA+TGG | 0.258176 | 6_3:-764817 | None:intergenic |
| GATTACTAGGGTTTGAGATT+TGG | 0.262449 | 6_3:-759145 | None:intergenic |
| AATCAGGGCAAAAGCTTTCT+AGG | 0.277751 | 6_3:+764597 | Msa0932560:CDS |
| GTGAGATTGAAGTGTGGTTT+TGG | 0.288990 | 6_3:-759236 | None:intergenic |
| CCCTGATTTCATGTCTTTCA+AGG | 0.289130 | 6_3:-764582 | None:intergenic |
| GGACGGAGATCTAGAGGTTT+AGG | 0.305182 | 6_3:+764650 | Msa0932560:CDS |
| TGGTGGAAATTCCAGGAAAA+TGG | 0.320222 | 6_3:+764385 | Msa0932560:CDS |
| GAAGATGAAAAGAGTGTTAT+GGG | 0.321530 | 6_3:+764428 | Msa0932560:CDS |
| TGGCAGTCTGCAGCCATTAT+GGG | 0.322578 | 6_3:-764816 | None:intergenic |
| AGAAGATGAAAAGAGTGTTA+TGG | 0.333476 | 6_3:+764427 | Msa0932560:CDS |
| TCCTTGAAAGACATGAAATC+AGG | 0.342062 | 6_3:+764581 | Msa0932560:CDS |
| AACTAGATACGTCGACTCTT+TGG | 0.342449 | 6_3:-764836 | None:intergenic |
| GAAACTGCAGGATATGTTAG+AGG | 0.388568 | 6_3:+764257 | Msa0932560:intron |
| CTGAGATTGGTGGAAATTCC+AGG | 0.399094 | 6_3:+764378 | Msa0932560:CDS |
| GTATCTTCAATGTATACAAT+TGG | 0.413544 | 6_3:-764782 | None:intergenic |
| GTAAAACTTAGTGGCTCTGC+TGG | 0.418753 | 6_3:+764557 | Msa0932560:CDS |
| TCCCGACCCCGCAGAAAATC+CGG | 0.427991 | 6_3:-764347 | None:intergenic |
| ACAACTCGTCGTCCCCATAA+TGG | 0.428444 | 6_3:+764803 | Msa0932560:CDS |
| AAAGGAAATGTAAAACTTAG+TGG | 0.428546 | 6_3:+764548 | Msa0932560:CDS |
| TGTGAATGCAAGTGCTCGTC+CGG | 0.438860 | 6_3:+764328 | Msa0932560:CDS |
| GCTATCTATCTCAGTTAGAA+AGG | 0.468861 | 6_3:+764976 | Msa0932560:three_prime_UTR |
| GTTACAGTGACCGATTCTAA+AGG | 0.474490 | 6_3:+764530 | Msa0932560:CDS |
| CGGGAGAATAATGCTGAGAT+TGG | 0.475176 | 6_3:+764365 | Msa0932560:CDS |
| AATGAAGAGATTGACGGCTA+TGG | 0.482399 | 6_3:-759207 | None:intergenic |
| CATCATGCTGGAAATGATAC+TGG | 0.482832 | 6_3:-764466 | None:intergenic |
| TGCTGAAGCAACTGCGGAAG+TGG | 0.498444 | 6_3:+764625 | Msa0932560:CDS |
| GTGCAAGTTGGGGTTTGAGC+GGG | 0.502328 | 6_3:+764288 | Msa0932560:CDS |
| GAGAATAATGCTGAGATTGG+TGG | 0.503317 | 6_3:+764368 | Msa0932560:CDS |
| AGAATCGGTCACTGTAACAA+AGG | 0.511601 | 6_3:-764525 | None:intergenic |
| GAACAAAATCAGCATCATGC+TGG | 0.519192 | 6_3:-764478 | None:intergenic |
| TTGTAGCAACGTCTATTGAA+AGG | 0.519770 | 6_3:+764954 | Msa0932560:three_prime_UTR |
| AGATTGACGGCTATGGATGA+AGG | 0.535592 | 6_3:-759200 | None:intergenic |
| TAGAAAATACGTTCAACAGA+AGG | 0.547606 | 6_3:-764872 | None:intergenic |
| CAAGTTGGGGTTTGAGCGGG+AGG | 0.553465 | 6_3:+764291 | Msa0932560:CDS |
| GGCAGTCTGCAGCCATTATG+GGG | 0.556364 | 6_3:-764815 | None:intergenic |
| TGAAGGAAGAACACAATTTG+CGG | 0.562090 | 6_3:-759183 | None:intergenic |
| GAAGCAACTGCGGAAGTGGT+TGG | 0.563081 | 6_3:+764629 | Msa0932560:CDS |
| ATGGAGAATGAAGAGATTGA+CGG | 0.563106 | 6_3:-759213 | None:intergenic |
| ATTGTTGCTGCAGATTACTA+GGG | 0.563552 | 6_3:-759157 | None:intergenic |
| AGCAATATTGAGCTGGAGGG+AGG | 0.568183 | 6_3:+764730 | Msa0932560:CDS |
| TCTCACACCACCTTCTTCCA+AGG | 0.578505 | 6_3:+759253 | Msa0932560:CDS |
| AAAGGCAAGCAATATTGAGC+TGG | 0.578900 | 6_3:+764723 | Msa0932560:CDS |
| GTGGTTGGACGGAGATCTAG+AGG | 0.582119 | 6_3:+764644 | Msa0932560:CDS |
| CCTTGAAAGACATGAAATCA+GGG | 0.583578 | 6_3:+764582 | Msa0932560:CDS |
| GCAATATTGAGCTGGAGGGA+GGG | 0.589094 | 6_3:+764731 | Msa0932560:CDS |
| CAACTGCGGAAGTGGTTGGA+CGG | 0.593288 | 6_3:+764633 | Msa0932560:CDS |
| TCTGTTGTCATGAAAGTGAA+CGG | 0.595836 | 6_3:+764680 | Msa0932560:CDS |
| AGGAAAATGGACTTTGTGAG+AGG | 0.596525 | 6_3:+764398 | Msa0932560:CDS |
| GGCAAGCAATATTGAGCTGG+AGG | 0.597786 | 6_3:+764726 | Msa0932560:CDS |
| TTACTAGGGTTTGAGATTTG+GGG | 0.606708 | 6_3:-759143 | None:intergenic |
| AGTGCAAGTTGGGGTTTGAG+CGG | 0.614200 | 6_3:+764287 | Msa0932560:CDS |
| GAGGGATTTACTGATTCTCG+AGG | 0.625322 | 6_3:+764749 | Msa0932560:CDS |
| GAAAGTGTTACCTTGGAAGA+AGG | 0.628450 | 6_3:-759263 | None:intergenic |
| GCAAGCAATATTGAGCTGGA+GGG | 0.647783 | 6_3:+764727 | Msa0932560:CDS |
| GTATGCTGCTGAAGCAACTG+CGG | 0.658519 | 6_3:+764619 | Msa0932560:CDS |
| GATGAAAAGAGTGTTATGGG+AGG | 0.673626 | 6_3:+764431 | Msa0932560:CDS |
| GGTGGTGTGAGATTGAAGTG+TGG | 0.696440 | 6_3:-759242 | None:intergenic |
| AGTGTTACCTTGGAAGAAGG+TGG | 0.718531 | 6_3:-759260 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAACAATAATGAAATAT+TGG | + | chr6_3:762548-762567 | Msa0932560:intron | 10.0% |
| !!! | CTTTTTTCTTTAATTGTTAT+TGG | + | chr6_3:759418-759437 | Msa0932560:intron | 15.0% |
| !!! | ATATATTTTACCATCAAATT+AGG | + | chr6_3:759918-759937 | Msa0932560:intron | 15.0% |
| !! | TTTCTTGATTTCATAAATTT+AGG | - | chr6_3:759946-759965 | None:intergenic | 15.0% |
| !! | TACAAAATATTGTTAAATAG+AGG | + | chr6_3:760284-760303 | Msa0932560:intron | 15.0% |
| !! | ACAAAATATTGTTAAATAGA+GGG | + | chr6_3:760285-760304 | Msa0932560:intron | 15.0% |
| !! | ACAAAAAGAAAATAAAAATC+AGG | - | chr6_3:760423-760442 | None:intergenic | 15.0% |
| !!! | TATAAGTTTTGTAAGATTTT+TGG | + | chr6_3:761409-761428 | Msa0932560:intron | 15.0% |
| !!! | ATAAGTTTTGTAAGATTTTT+GGG | + | chr6_3:761410-761429 | Msa0932560:intron | 15.0% |
| !!! | ATATATTTTACCATCAAATT+AGG | + | chr6_3:759918-759937 | Msa0932560:intron | 15.0% |
| !! | AAATCAATAAACTAGAAAAA+AGG | + | chr6_3:761752-761771 | Msa0932560:intron | 15.0% |
| !! | ATATATGTTATCATCAAATT+AGG | + | chr6_3:761970-761989 | Msa0932560:intron | 15.0% |
| !! | TACAAAATATTGTTAAATAG+CGG | + | chr6_3:760284-760303 | Msa0932560:intron | 15.0% |
| !!! | TATAGTTTTCATCTAAAATT+GGG | - | chr6_3:762723-762742 | None:intergenic | 15.0% |
| !!! | ATATAGTTTTCATCTAAAAT+TGG | - | chr6_3:762724-762743 | None:intergenic | 15.0% |
| !! | TTGTGTTAATTATATTAAGT+TGG | + | chr6_3:763654-763673 | Msa0932560:intron | 15.0% |
| !! | TGTGTTAATTATATTAAGTT+GGG | + | chr6_3:763655-763674 | Msa0932560:intron | 15.0% |
| !! | TATCAAATTATTATCAGTGT+CGG | - | chr6_3:759537-759556 | None:intergenic | 20.0% |
| !!! | ATAAGTTTTGTAAGATTGTT+TGG | + | chr6_3:759600-759619 | Msa0932560:intron | 20.0% |
| !!! | TAAGTTTTGTAAGATTGTTT+GGG | + | chr6_3:759601-759620 | Msa0932560:intron | 20.0% |
| !! | ATACATGATATCATCAAATT+AGG | + | chr6_3:760173-760192 | Msa0932560:intron | 20.0% |
| !!! | TTTTCTTTTTGTAGAAAGAT+TGG | + | chr6_3:760431-760450 | Msa0932560:intron | 20.0% |
| !! | TAAAGAAATTGGATTCTAAA+TGG | + | chr6_3:760584-760603 | Msa0932560:intron | 20.0% |
| !! | ATATATGGTATCATCAAATT+AGG | + | chr6_3:760777-760796 | Msa0932560:intron | 20.0% |
| !! | TACAAAATATTGTCAAATAG+CGG | + | chr6_3:761126-761145 | Msa0932560:intron | 20.0% |
| !!! | TTTATTGATTTCATCCATTT+AGG | - | chr6_3:761743-761762 | None:intergenic | 20.0% |
| !!! | TATTCTTTTTGTAGAAAGAT+TGG | + | chr6_3:762247-762266 | Msa0932560:intron | 20.0% |
| !!! | ATCTAATTTCATTCCTTTTT+GGG | + | chr6_3:762799-762818 | Msa0932560:intron | 20.0% |
| !!! | TTATTAGAGTTGATAAAAGA+AGG | + | chr6_3:762844-762863 | Msa0932560:intron | 20.0% |
| !! | TTGCTAGTAAAAAATTAACA+TGG | + | chr6_3:762940-762959 | Msa0932560:intron | 20.0% |
| !!! | AAAAGGTTTAAAATCCATAT+GGG | - | chr6_3:762979-762998 | None:intergenic | 20.0% |
| !!! | TAAAAGGTTTAAAATCCATA+TGG | - | chr6_3:762980-762999 | None:intergenic | 20.0% |
| !! | TAAAGAATCAAAGTCATAAA+AGG | - | chr6_3:762996-763015 | None:intergenic | 20.0% |
| !! | TATCCTAATCAAATTAATCT+TGG | - | chr6_3:763104-763123 | None:intergenic | 20.0% |
| !!! | AGATTAATTTGATTAGGATA+TGG | + | chr6_3:763104-763123 | Msa0932560:intron | 20.0% |
| !! | AAGATGTGTTAAACAAAATA+GGG | + | chr6_3:763472-763491 | Msa0932560:intron | 20.0% |
| !!! | TTATTTTGTGAGACTAAATT+GGG | - | chr6_3:763606-763625 | None:intergenic | 20.0% |
| !!! | ATTATTTTGTGAGACTAAAT+TGG | - | chr6_3:763607-763626 | None:intergenic | 20.0% |
| !!! | TGGTTATTATTTTGAGTAAA+AGG | + | chr6_3:763912-763931 | Msa0932560:intron | 20.0% |
| !!! | ATTTTGTTCATATAAAGATG+CGG | + | chr6_3:764492-764511 | Msa0932560:CDS | 20.0% |
| !!! | TTTTACATTTCCTTTAGAAT+CGG | - | chr6_3:764543-764562 | None:intergenic | 20.0% |
| !! | GAGAGTGATAATCATTTTAA+AGG | - | chr6_3:759098-759117 | None:intergenic | 25.0% |
| !! | TTTTTAGATGTTTGCACTTT+TGG | + | chr6_3:759373-759392 | Msa0932560:intron | 25.0% |
| !! | TTTTAGATGTTTGCACTTTT+GGG | + | chr6_3:759374-759393 | Msa0932560:intron | 25.0% |
| !! | AATTTAGGATCCTAATTTGA+TGG | - | chr6_3:759931-759950 | None:intergenic | 25.0% |
| ! | GAAATCAAGAAACTAGAAAA+AGG | + | chr6_3:759954-759973 | Msa0932560:intron | 25.0% |
| ! | TTACTAGTTAGTGATAGATT+CGG | + | chr6_3:759985-760004 | Msa0932560:intron | 25.0% |
| ! | TATTACTAGTGTATATGTGT+CGG | - | chr6_3:760054-760073 | None:intergenic | 25.0% |
| !! | TATTTTGTAATAGTGTATCG+TGG | - | chr6_3:760273-760292 | None:intergenic | 25.0% |
| ! | TTACAACTTTAGATCCTAAA+TGG | + | chr6_3:760367-760386 | Msa0932560:intron | 25.0% |
| !!! | TATTTCATTTTAGTGTACCT+AGG | + | chr6_3:760485-760504 | Msa0932560:intron | 25.0% |
| !!! | TGTCAATGTTCTAAAGAAAT+TGG | + | chr6_3:760573-760592 | Msa0932560:intron | 25.0% |
| ! | TAAAATCAAGAAAACTGGAA+AGG | + | chr6_3:760608-760627 | Msa0932560:intron | 25.0% |
| ! | TAAATCAAGAAACTGCAAAA+AGG | + | chr6_3:760664-760683 | Msa0932560:intron | 25.0% |
| ! | TACACAACTCATATCATATA+TGG | + | chr6_3:759903-759922 | Msa0932560:intron | 25.0% |
| ! | TACACAACTCATATCATATA+TGG | + | chr6_3:759903-759922 | Msa0932560:intron | 25.0% |
| ! | CTAAATAGCTGAATTCATTT+GGG | + | chr6_3:761234-761253 | Msa0932560:intron | 25.0% |
| ! | AAATAGAAGTGATCGTATAT+AGG | + | chr6_3:761372-761391 | Msa0932560:intron | 25.0% |
| ! | AATAGAAGTGATCGTATATA+GGG | + | chr6_3:761373-761392 | Msa0932560:intron | 25.0% |
| ! | AATAAGTTGTTTATCCAAAC+AGG | + | chr6_3:759820-759839 | Msa0932560:intron | 25.0% |
| !!! | TATTTGATTTTAATGCACGT+GGG | + | chr6_3:762300-762319 | Msa0932560:intron | 25.0% |
| !!! | CATAATATTTAGCTTGCATT+TGG | + | chr6_3:762357-762376 | Msa0932560:intron | 25.0% |
| ! | TCAACAAATTAGATCCTAAA+TGG | + | chr6_3:762399-762418 | Msa0932560:intron | 25.0% |
| ! | TCATTATTGTTAAATGAGCT+TGG | - | chr6_3:762543-762562 | None:intergenic | 25.0% |
| ! | AATATGATGCTATCAATTAG+TGG | + | chr6_3:762644-762663 | Msa0932560:intron | 25.0% |
| !! | CATCTAATTTCATTCCTTTT+TGG | + | chr6_3:762798-762817 | Msa0932560:intron | 25.0% |
| !! | TCTAATTTCATTCCTTTTTG+GGG | + | chr6_3:762800-762819 | Msa0932560:intron | 25.0% |
| !! | TAGCCAAGATTAATTTGATT+AGG | + | chr6_3:763098-763117 | Msa0932560:intron | 25.0% |
| ! | CAAGATGTGTTAAACAAAAT+AGG | + | chr6_3:763471-763490 | Msa0932560:intron | 25.0% |
| ! | CTTATCAGTGTACTAATATT+CGG | + | chr6_3:763543-763562 | Msa0932560:intron | 25.0% |
| ! | GAAAATTGTAAGACCAAATT+GGG | - | chr6_3:763577-763596 | None:intergenic | 25.0% |
| ! | AGAAAATTGTAAGACCAAAT+TGG | - | chr6_3:763578-763597 | None:intergenic | 25.0% |
| ! | ACACAATTTGAAAATGTCAA+GGG | - | chr6_3:763640-763659 | None:intergenic | 25.0% |
| ! | AACACAATTTGAAAATGTCA+AGG | - | chr6_3:763641-763660 | None:intergenic | 25.0% |
| !!! | TAATCTTCTATTTCTATACC+TGG | - | chr6_3:763751-763770 | None:intergenic | 25.0% |
| ! | AATCACACAAAACCTTATTA+GGG | - | chr6_3:764107-764126 | None:intergenic | 25.0% |
| ! | TAATCACACAAAACCTTATT+AGG | - | chr6_3:764108-764127 | None:intergenic | 25.0% |
| ! | TTATGCAATGACATGAAATA+TGG | - | chr6_3:763290-763309 | None:intergenic | 25.0% |
| ! | AAAGGAAATGTAAAACTTAG+TGG | + | chr6_3:764548-764567 | Msa0932560:CDS | 25.0% |
| ! | GTATCTTCAATGTATACAAT+TGG | - | chr6_3:764785-764804 | None:intergenic | 25.0% |
| ! | ATTACTAGGGTTTGAGATTT+GGG | - | chr6_3:759147-759166 | None:intergenic | 30.0% |
| CAACACACACTTATGATTAT+GGG | - | chr6_3:759846-759865 | None:intergenic | 30.0% | |
| TCAACACACACTTATGATTA+TGG | - | chr6_3:759847-759866 | None:intergenic | 30.0% | |
| CACTCTTTAACAACATTGTT+AGG | - | chr6_3:760201-760220 | None:intergenic | 30.0% | |
| ATGGCTAAAATCAAGAAAAC+TGG | + | chr6_3:760603-760622 | Msa0932560:intron | 30.0% | |
| ATGCCTTCAATATGAAGTTT+AGG | + | chr6_3:760736-760755 | Msa0932560:intron | 30.0% | |
| TCTCTATTCACAACATTGTT+AGG | - | chr6_3:760805-760824 | None:intergenic | 30.0% | |
| ATGCCTTCAATATGAAGTTT+AGG | + | chr6_3:760736-760755 | Msa0932560:intron | 30.0% | |
| ! | GATTTGTTCAAATTTCGCTA+CGG | - | chr6_3:761079-761098 | None:intergenic | 30.0% |
| CCAAATGAATTCAGCTATTT+AGG | - | chr6_3:761236-761255 | None:intergenic | 30.0% | |
| CCTAAATAGCTGAATTCATT+TGG | + | chr6_3:761233-761252 | Msa0932560:intron | 30.0% | |
| !! | GTATATAGGGTCTTATTTAC+TGG | + | chr6_3:761386-761405 | Msa0932560:intron | 30.0% |
| ! | AGATCTTTTTATAAGCTACC+TGG | - | chr6_3:761502-761521 | None:intergenic | 30.0% |
| ! | CATTTAGGATCCTAATTTGA+TGG | - | chr6_3:761728-761747 | None:intergenic | 30.0% |
| CATCAAATTAGGATCCTAAA+TGG | + | chr6_3:759929-759948 | Msa0932560:intron | 30.0% | |
| ATGCCTTCAATATGAAGTTT+CGG | + | chr6_3:760736-760755 | Msa0932560:intron | 30.0% | |
| TCTCTATTCACAACATTGTT+AGG | - | chr6_3:760805-760824 | None:intergenic | 30.0% | |
| !! | GTTTTGTTCAAATTTCGCTA+CGG | - | chr6_3:762045-762064 | None:intergenic | 30.0% |
| TGACAACATTAGATCCTAAA+TGG | + | chr6_3:762185-762204 | Msa0932560:intron | 30.0% | |
| !! | GTATTTGATTTTAATGCACG+TGG | + | chr6_3:762299-762318 | Msa0932560:intron | 30.0% |
| TAAAGTCGAGAAAACAGAAA+AGG | + | chr6_3:762423-762442 | Msa0932560:intron | 30.0% | |
| AGTGATAGATAGTAATCAAC+AGG | + | chr6_3:762455-762474 | Msa0932560:intron | 30.0% | |
| ! | GTGAAATACACAGTGTTTTA+AGG | - | chr6_3:762484-762503 | None:intergenic | 30.0% |
| !!! | CGGTTTTTTTTTGGAAGTAA+AGG | + | chr6_3:763132-763151 | Msa0932560:intron | 30.0% |
| GTTTCTGTCAAAACAAGTAA+AGG | + | chr6_3:763159-763178 | Msa0932560:intron | 30.0% | |
| TGGAAAGACTAACTTAGAAT+TGG | + | chr6_3:763354-763373 | Msa0932560:intron | 30.0% | |
| TGAAGCTCATCAACATAAAT+GGG | - | chr6_3:763414-763433 | None:intergenic | 30.0% | |
| ATGAAGCTCATCAACATAAA+TGG | - | chr6_3:763415-763434 | None:intergenic | 30.0% | |
| TTTGTTTAACACATCTTGCT+TGG | - | chr6_3:763469-763488 | None:intergenic | 30.0% | |
| TCGACAAAAATTGTTAGATG+TGG | + | chr6_3:763782-763801 | Msa0932560:intron | 30.0% | |
| ATACCATTCTCACTAATTGT+TGG | + | chr6_3:763833-763852 | Msa0932560:intron | 30.0% | |
| AAACCAACAATTAGTGAGAA+TGG | - | chr6_3:763839-763858 | None:intergenic | 30.0% | |
| CTTCAATATTTGTGTTTGTG+TGG | + | chr6_3:763982-764001 | Msa0932560:intron | 30.0% | |
| TGTGGTGAAAATAAATAGAG+TGG | + | chr6_3:764000-764019 | Msa0932560:intron | 30.0% | |
| ATCACACAAAACCTTATTAG+GGG | - | chr6_3:764106-764125 | None:intergenic | 30.0% | |
| !! | AGAAGATGAAAAGAGTGTTA+TGG | + | chr6_3:764427-764446 | Msa0932560:CDS | 30.0% |
| !! | GAAGATGAAAAGAGTGTTAT+GGG | + | chr6_3:764428-764447 | Msa0932560:CDS | 30.0% |
| ! | TTACTCATTTTCGAAGGAAA+AGG | + | chr6_3:764705-764724 | Msa0932560:CDS | 30.0% |
| TAGAAAATACGTTCAACAGA+AGG | - | chr6_3:764875-764894 | None:intergenic | 30.0% | |
| ! | TTACTAGGGTTTGAGATTTG+GGG | - | chr6_3:759146-759165 | None:intergenic | 35.0% |
| ! | GATTACTAGGGTTTGAGATT+TGG | - | chr6_3:759148-759167 | None:intergenic | 35.0% |
| ATTGTTGCTGCAGATTACTA+GGG | - | chr6_3:759160-759179 | None:intergenic | 35.0% | |
| TGAAGGAAGAACACAATTTG+CGG | - | chr6_3:759186-759205 | None:intergenic | 35.0% | |
| ATGGAGAATGAAGAGATTGA+CGG | - | chr6_3:759216-759235 | None:intergenic | 35.0% | |
| !! | AAAGTGTGAAAGTGTTACCT+TGG | - | chr6_3:759273-759292 | None:intergenic | 35.0% |
| AAGTGATCGTATTCGTATGT+AGG | + | chr6_3:759562-759581 | Msa0932560:intron | 35.0% | |
| AGTGATCGTATTCGTATGTA+GGG | + | chr6_3:759563-759582 | Msa0932560:intron | 35.0% | |
| !! | GTATGTAGGGTCTTATTTAC+TGG | + | chr6_3:759576-759595 | Msa0932560:intron | 35.0% |
| ! | TTATTTTCGTAAGTTCTGCC+AGG | + | chr6_3:759672-759691 | Msa0932560:intron | 35.0% |
| AGATCTTTCTATAAGCTACC+TGG | - | chr6_3:759693-759712 | None:intergenic | 35.0% | |
| CTTATGATTATGGGTCTGTT+TGG | - | chr6_3:759837-759856 | None:intergenic | 35.0% | |
| ! | ATGCCTTTAATCTGAAGTGT+CGG | + | chr6_3:759877-759896 | Msa0932560:intron | 35.0% |
| CAAGAAACTAGAAAAAGGTG+TGG | + | chr6_3:759959-759978 | Msa0932560:intron | 35.0% | |
| ATAGTTGTGTTATACCGTAG+CGG | + | chr6_3:760224-760243 | Msa0932560:intron | 35.0% | |
| ! | GATTTGTTCAAATTCCGCTA+CGG | - | chr6_3:760241-760260 | None:intergenic | 35.0% |
| CCAAATGATTTCAGCCATTT+AGG | - | chr6_3:760384-760403 | None:intergenic | 35.0% | |
| CCTAAATGGCTGAAATCATT+TGG | + | chr6_3:760381-760400 | Msa0932560:intron | 35.0% | |
| TAGAAAGATTGGTGCAATAG+TGG | + | chr6_3:760442-760461 | Msa0932560:intron | 35.0% | |
| GTGAGTAGTGATAAATCCTT+TGG | + | chr6_3:760641-760660 | Msa0932560:intron | 35.0% | |
| GCAGTTTCTTGATTTACCAA+AGG | - | chr6_3:760660-760679 | None:intergenic | 35.0% | |
| GCACCTAAACTTCATATTGA+AGG | - | chr6_3:760742-760761 | None:intergenic | 35.0% | |
| ! | GCTTTGTTCAAATTTCGCTA+CGG | - | chr6_3:760852-760871 | None:intergenic | 35.0% |
| GCACCTAAACTTCATATTGA+AGG | - | chr6_3:760742-760761 | None:intergenic | 35.0% | |
| TTGTACTAAGTAGTGTATCG+CGG | - | chr6_3:761111-761130 | None:intergenic | 35.0% | |
| CAGCCTATGATATTGTTCAT+CGG | + | chr6_3:761447-761466 | Msa0932560:intron | 35.0% | |
| CAACCGATGAACAATATCAT+AGG | - | chr6_3:761453-761472 | None:intergenic | 35.0% | |
| ! | TTATTTTCGTATGTTCTGCC+AGG | + | chr6_3:761481-761500 | Msa0932560:intron | 35.0% |
| !! | TTGTAGCACCGACATATTAA+AGG | - | chr6_3:761688-761707 | None:intergenic | 35.0% |
| AAGGTGTAGTAGTTACTAGT+TGG | + | chr6_3:761771-761790 | Msa0932560:intron | 35.0% | |
| TATTGCTGATGTATATGCGT+CGG | - | chr6_3:761852-761871 | None:intergenic | 35.0% | |
| GTTGTGAATAGAGATTGTAG+TGG | + | chr6_3:762004-762023 | Msa0932560:intron | 35.0% | |
| CTAAATGGCTGAAGTCATTT+GGG | + | chr6_3:762200-762219 | Msa0932560:intron | 35.0% | |
| TTTCTCGACTTTAGCCATTT+AGG | - | chr6_3:762416-762435 | None:intergenic | 35.0% | |
| TCGAGAAAACAGAAAAGGAT+CGG | + | chr6_3:762428-762447 | Msa0932560:intron | 35.0% | |
| !!! | AATCCTTTGAGCTAGCTTTT+GGG | + | chr6_3:762509-762528 | Msa0932560:intron | 35.0% |
| ATATCTGTGATTCACATCAG+TGG | + | chr6_3:762590-762609 | Msa0932560:intron | 35.0% | |
| TATCACTGAATGAATGCTCT+TGG | + | chr6_3:762686-762705 | Msa0932560:intron | 35.0% | |
| AAAATTCCTGTCAGACAGTT+TGG | + | chr6_3:762753-762772 | Msa0932560:intron | 35.0% | |
| AAATTCCTGTCAGACAGTTT+GGG | + | chr6_3:762754-762773 | Msa0932560:intron | 35.0% | |
| TGAGAACTTAATCCCCAAAA+AGG | - | chr6_3:762815-762834 | None:intergenic | 35.0% | |
| AAATTAACATGGCTTTCCAC+AGG | + | chr6_3:762951-762970 | Msa0932560:intron | 35.0% | |
| TTGATTAGGATATGGCTTGA+CGG | + | chr6_3:763112-763131 | Msa0932560:intron | 35.0% | |
| !!! | ATGGCTTGACGGTTTTTTTT+TGG | + | chr6_3:763123-763142 | Msa0932560:intron | 35.0% |
| ATAATGATACACGCAAAGAG+TGG | + | chr6_3:763334-763353 | Msa0932560:intron | 35.0% | |
| ! | TTGATGAGCTTCATAGCTTT+TGG | + | chr6_3:763421-763440 | Msa0932560:intron | 35.0% |
| GAGAAAGCAACTTAGGAATT+TGG | + | chr6_3:763496-763515 | Msa0932560:intron | 35.0% | |
| ATTAGTACACTGATAAGCTG+AGG | - | chr6_3:763540-763559 | None:intergenic | 35.0% | |
| AGCAAGCTCAGCATATAATT+TGG | + | chr6_3:763892-763911 | Msa0932560:intron | 35.0% | |
| ATGAATGCATGGTAATAGAG+AGG | + | chr6_3:764029-764048 | Msa0932560:intron | 35.0% | |
| TGAATGCATGGTAATAGAGA+GGG | + | chr6_3:764030-764049 | Msa0932560:intron | 35.0% | |
| TTTCATACTCTTGAAACTGC+AGG | + | chr6_3:764245-764264 | Msa0932560:intron | 35.0% | |
| !!! | AGGATTTTCAAGTGCAAGTT+GGG | + | chr6_3:764277-764296 | Msa0932560:CDS | 35.0% |
| TCCTTGAAAGACATGAAATC+AGG | + | chr6_3:764581-764600 | Msa0932560:CDS | 35.0% | |
| CCTTGAAAGACATGAAATCA+GGG | + | chr6_3:764582-764601 | Msa0932560:CDS | 35.0% | |
| TCTGTTGTCATGAAAGTGAA+CGG | + | chr6_3:764680-764699 | Msa0932560:CDS | 35.0% | |
| ! | ACGGATTTACTCATTTTCGA+AGG | + | chr6_3:764699-764718 | Msa0932560:CDS | 35.0% |
| AGACGTTGCTACAAAAATTC+TGG | - | chr6_3:764948-764967 | None:intergenic | 35.0% | |
| TTGTAGCAACGTCTATTGAA+AGG | + | chr6_3:764954-764973 | Msa0932560:three_prime_UTR | 35.0% | |
| GCTATCTATCTCAGTTAGAA+AGG | + | chr6_3:764976-764995 | Msa0932560:three_prime_UTR | 35.0% | |
| CATTGTTGCTGCAGATTACT+AGG | - | chr6_3:759161-759180 | None:intergenic | 40.0% | |
| AATGAAGAGATTGACGGCTA+TGG | - | chr6_3:759210-759229 | None:intergenic | 40.0% | |
| !!! | GATTGAAGTGTGGTTTTGGA+TGG | - | chr6_3:759235-759254 | None:intergenic | 40.0% |
| ! | GTGAGATTGAAGTGTGGTTT+TGG | - | chr6_3:759239-759258 | None:intergenic | 40.0% |
| !! | GAAAGTGTTACCTTGGAAGA+AGG | - | chr6_3:759266-759285 | None:intergenic | 40.0% |
| ! | GAAACTAGAAAAAGGTGTGG+TGG | + | chr6_3:759962-759981 | Msa0932560:intron | 40.0% |
| ATGTCTTCAATCTGCAGTGT+TGG | + | chr6_3:760132-760151 | Msa0932560:intron | 40.0% | |
| !! | AGATTGGTGCAATAGTGGAT+CGG | + | chr6_3:760447-760466 | Msa0932560:intron | 40.0% |
| CAAGAAACTGCAAAAAGGTG+TGG | + | chr6_3:760669-760688 | Msa0932560:intron | 40.0% | |
| GTTGTGAATAGAGACTGTAG+TGG | + | chr6_3:760811-760830 | Msa0932560:intron | 40.0% | |
| GTTGTGAATAGAGACTGTAG+TGG | + | chr6_3:760811-760830 | Msa0932560:intron | 40.0% | |
| TCGACACGCCTTTAATATGT+CGG | + | chr6_3:761677-761696 | Msa0932560:intron | 40.0% | |
| GCACCGAAACTTCATATTGA+AGG | - | chr6_3:761935-761954 | None:intergenic | 40.0% | |
| TTGTTCCACGATACACTACT+TGG | + | chr6_3:762069-762088 | Msa0932560:intron | 40.0% | |
| TTGTACCAAGTAGTGTATCG+TGG | - | chr6_3:762077-762096 | None:intergenic | 40.0% | |
| CCAAATGACTTCAGCCATTT+AGG | - | chr6_3:762202-762221 | None:intergenic | 40.0% | |
| CCTAAATGGCTGAAGTCATT+TGG | + | chr6_3:762199-762218 | Msa0932560:intron | 40.0% | |
| TAGAAAGATTGGCGCAATAG+TGG | + | chr6_3:762258-762277 | Msa0932560:intron | 40.0% | |
| !!! | CAATCCTTTGAGCTAGCTTT+TGG | + | chr6_3:762508-762527 | Msa0932560:intron | 40.0% |
| ! | TTGGCTCTTATCAAGTTTGC+TGG | + | chr6_3:762567-762586 | Msa0932560:intron | 40.0% |
| ! | CATCAGTGGTCAACCAATTT+TGG | + | chr6_3:762604-762623 | Msa0932560:intron | 40.0% |
| GACTACTGATCCACCAAAAT+TGG | - | chr6_3:762620-762639 | None:intergenic | 40.0% | |
| ! | GAATGCTCTTGGTTAGTTGT+AGG | + | chr6_3:762697-762716 | Msa0932560:intron | 40.0% |
| ! | GTGCTTTGTGCTTTGTTACT+TGG | - | chr6_3:762879-762898 | None:intergenic | 40.0% |
| AAAATCCATATGGGAACCTG+TGG | - | chr6_3:762970-762989 | None:intergenic | 40.0% | |
| CACGCAACAACTATCAATAG+AGG | + | chr6_3:763019-763038 | Msa0932560:intron | 40.0% | |
| TGTCAAAACAAGTAAAGGCG+TGG | + | chr6_3:763164-763183 | Msa0932560:intron | 40.0% | |
| ATAGGGAGAGAAAGCAACTT+AGG | + | chr6_3:763489-763508 | Msa0932560:intron | 40.0% | |
| AGTGAGAATGGTATCGTCTA+AGG | - | chr6_3:763827-763846 | None:intergenic | 40.0% | |
| GAACTGCGAGAAAATTGTGA+AGG | + | chr6_3:763942-763961 | Msa0932560:intron | 40.0% | |
| AGTGGAGATGAATGAATGCA+TGG | + | chr6_3:764018-764037 | Msa0932560:intron | 40.0% | |
| GAATGCATGGTAATAGAGAG+GGG | + | chr6_3:764031-764050 | Msa0932560:intron | 40.0% | |
| ! | TTCTTTTCACATAACGCAGC+AGG | - | chr6_3:764067-764086 | None:intergenic | 40.0% |
| AAGATGGTTGACCCCTAATA+AGG | + | chr6_3:764092-764111 | Msa0932560:intron | 40.0% | |
| GAAACTGCAGGATATGTTAG+AGG | + | chr6_3:764257-764276 | Msa0932560:intron | 40.0% | |
| !!! | GAGGATTTTCAAGTGCAAGT+TGG | + | chr6_3:764276-764295 | Msa0932560:CDS | 40.0% |
| !!! | GGATTTTCAAGTGCAAGTTG+GGG | + | chr6_3:764278-764297 | Msa0932560:CDS | 40.0% |
| GAGAATAATGCTGAGATTGG+TGG | + | chr6_3:764368-764387 | Msa0932560:CDS | 40.0% | |
| TGGTGGAAATTCCAGGAAAA+TGG | + | chr6_3:764385-764404 | Msa0932560:CDS | 40.0% | |
| ! | TCTCACAAAGTCCATTTTCC+TGG | - | chr6_3:764399-764418 | None:intergenic | 40.0% |
| ! | AGGAAAATGGACTTTGTGAG+AGG | + | chr6_3:764398-764417 | Msa0932560:CDS | 40.0% |
| !! | GATGAAAAGAGTGTTATGGG+AGG | + | chr6_3:764431-764450 | Msa0932560:CDS | 40.0% |
| CATCATGCTGGAAATGATAC+TGG | - | chr6_3:764469-764488 | None:intergenic | 40.0% | |
| GAACAAAATCAGCATCATGC+TGG | - | chr6_3:764481-764500 | None:intergenic | 40.0% | |
| AGAATCGGTCACTGTAACAA+AGG | - | chr6_3:764528-764547 | None:intergenic | 40.0% | |
| ! | GTTACAGTGACCGATTCTAA+AGG | + | chr6_3:764530-764549 | Msa0932560:CDS | 40.0% |
| CCCTGATTTCATGTCTTTCA+AGG | - | chr6_3:764585-764604 | None:intergenic | 40.0% | |
| AATCAGGGCAAAAGCTTTCT+AGG | + | chr6_3:764597-764616 | Msa0932560:CDS | 40.0% | |
| AAAGGCAAGCAATATTGAGC+TGG | + | chr6_3:764723-764742 | Msa0932560:CDS | 40.0% | |
| !! | AACTAGATACGTCGACTCTT+TGG | - | chr6_3:764839-764858 | None:intergenic | 40.0% |
| AGATTGACGGCTATGGATGA+AGG | - | chr6_3:759203-759222 | None:intergenic | 45.0% | |
| AGTGTTACCTTGGAAGAAGG+TGG | - | chr6_3:759263-759282 | None:intergenic | 45.0% | |
| !! | ATCAGTGTCGGTGTTTGTGT+TGG | - | chr6_3:759525-759544 | None:intergenic | 45.0% |
| ! | GCACCGACACTTCAGATTAA+AGG | - | chr6_3:759883-759902 | None:intergenic | 45.0% |
| AGTTGTAAAGCGCAGATTGC+AGG | - | chr6_3:760355-760374 | None:intergenic | 45.0% | |
| !! | GTGCAATAGTGGATCGGATT+AGG | + | chr6_3:760453-760472 | Msa0932560:intron | 45.0% |
| ! | GAAACTGCAAAAAGGTGTGG+TGG | + | chr6_3:760672-760691 | Msa0932560:intron | 45.0% |
| !! | GCGCAATAGTGGATACGATT+AGG | + | chr6_3:762269-762288 | Msa0932560:intron | 45.0% |
| ACTCCCAAAAGCTAGCTCAA+AGG | - | chr6_3:762515-762534 | None:intergenic | 45.0% | |
| ! | CAGTGGTCAACCAATTTTGG+TGG | + | chr6_3:762607-762626 | Msa0932560:intron | 45.0% |
| GTAGAGTGCAGGATATAGAG+TGG | + | chr6_3:763387-763406 | Msa0932560:intron | 45.0% | |
| TTTGGCATGTCCTAGTGTCA+CGG | + | chr6_3:763514-763533 | Msa0932560:intron | 45.0% | |
| TTCGGAGTGAAGACCCAATT+TGG | + | chr6_3:763561-763580 | Msa0932560:intron | 45.0% | |
| CACAGTTCATGACTCATGAG+AGG | - | chr6_3:763691-763710 | None:intergenic | 45.0% | |
| CGTCACATTGCTTTGCTAGT+TGG | - | chr6_3:763718-763737 | None:intergenic | 45.0% | |
| ATGTGACGTGTGTTGTATCC+AGG | + | chr6_3:763730-763749 | Msa0932560:intron | 45.0% | |
| !! | TATGCTGAGCTTGCTGTTGA+AGG | - | chr6_3:763887-763906 | None:intergenic | 45.0% |
| CGGGAGAATAATGCTGAGAT+TGG | + | chr6_3:764365-764384 | Msa0932560:CDS | 45.0% | |
| CTGAGATTGGTGGAAATTCC+AGG | + | chr6_3:764378-764397 | Msa0932560:CDS | 45.0% | |
| ! | GTAAAACTTAGTGGCTCTGC+TGG | + | chr6_3:764557-764576 | Msa0932560:CDS | 45.0% |
| GCAAGCAATATTGAGCTGGA+GGG | + | chr6_3:764727-764746 | Msa0932560:CDS | 45.0% | |
| !! | GAGGGATTTACTGATTCTCG+AGG | + | chr6_3:764749-764768 | Msa0932560:CDS | 45.0% |
| !!! | TTTTATCATTATTTTTTTAT+TGG | + | chr6_3:759322-759341 | Msa0932560:intron | 5.0% |
| !!! | TTTATCATTATTTTTTTATT+GGG | + | chr6_3:759323-759342 | Msa0932560:intron | 5.0% |
| !!! | ATTTTTAATCTAAAATTTTA+AGG | - | chr6_3:763218-763237 | None:intergenic | 5.0% |
| GGTGGTGTGAGATTGAAGTG+TGG | - | chr6_3:759245-759264 | None:intergenic | 50.0% | |
| TCTCACACCACCTTCTTCCA+AGG | + | chr6_3:759253-759272 | Msa0932560:CDS | 50.0% | |
| GTACCTAGGTTGTGTGTGCT+TGG | + | chr6_3:760499-760518 | Msa0932560:intron | 50.0% | |
| GTCAGTGTCAGTGTCAGCAT+CGG | - | chr6_3:760876-760895 | None:intergenic | 50.0% | |
| AGCAGTGTCCACGTTTGTGT+CGG | - | chr6_3:761340-761359 | None:intergenic | 50.0% | |
| AAACAGGCCCATACTCACCA+GGG | + | chr6_3:761641-761660 | Msa0932560:intron | 50.0% | |
| CAACACACCCTGGTGAGTAT+GGG | - | chr6_3:761651-761670 | None:intergenic | 50.0% | |
| TCAACACACCCTGGTGAGTA+TGG | - | chr6_3:761652-761671 | None:intergenic | 50.0% | |
| TGTTGTCAAGCGCAGATTGC+AGG | - | chr6_3:762173-762192 | None:intergenic | 50.0% | |
| GCTTTCCACAGGTTCCCATA+TGG | + | chr6_3:762962-762981 | Msa0932560:intron | 50.0% | |
| GTGACATCAGTGTAGAGTGC+AGG | + | chr6_3:763376-763395 | Msa0932560:intron | 50.0% | |
| TCACATAACGCAGCAGGCAA+AGG | - | chr6_3:764061-764080 | None:intergenic | 50.0% | |
| ! | AGTGCAAGTTGGGGTTTGAG+CGG | + | chr6_3:764287-764306 | Msa0932560:CDS | 50.0% |
| TGTGAATGCAAGTGCTCGTC+CGG | + | chr6_3:764328-764347 | Msa0932560:CDS | 50.0% | |
| GTATGCTGCTGAAGCAACTG+CGG | + | chr6_3:764619-764638 | Msa0932560:CDS | 50.0% | |
| GGACGGAGATCTAGAGGTTT+AGG | + | chr6_3:764650-764669 | Msa0932560:CDS | 50.0% | |
| GGCAAGCAATATTGAGCTGG+AGG | + | chr6_3:764726-764745 | Msa0932560:CDS | 50.0% | |
| AGCAATATTGAGCTGGAGGG+AGG | + | chr6_3:764730-764749 | Msa0932560:CDS | 50.0% | |
| GCAATATTGAGCTGGAGGGA+GGG | + | chr6_3:764731-764750 | Msa0932560:CDS | 50.0% | |
| ACAACTCGTCGTCCCCATAA+TGG | + | chr6_3:764803-764822 | Msa0932560:CDS | 50.0% | |
| TGGCAGTCTGCAGCCATTAT+GGG | - | chr6_3:764819-764838 | None:intergenic | 50.0% | |
| TTGGCAGTCTGCAGCCATTA+TGG | - | chr6_3:764820-764839 | None:intergenic | 50.0% | |
| GAGCCAAGCACACACAACCT+AGG | - | chr6_3:760505-760524 | None:intergenic | 55.0% | |
| TGTTGTCAAGCGCAGATCGC+AGG | - | chr6_3:761207-761226 | None:intergenic | 55.0% | |
| !! | GTGAAGCACCGACACAAACG+TGG | + | chr6_3:761329-761348 | Msa0932560:intron | 55.0% |
| CTGGTGAGTATGGGCCTGTT+TGG | - | chr6_3:761642-761661 | None:intergenic | 55.0% | |
| CAAACAGGCCCATACTCACC+AGG | + | chr6_3:761640-761659 | Msa0932560:intron | 55.0% | |
| ! | TCGAAGTGCTCAACACACCC+TGG | - | chr6_3:761661-761680 | None:intergenic | 55.0% |
| CACTGCCCAAACTGTCTGAC+AGG | - | chr6_3:762762-762781 | None:intergenic | 55.0% | |
| TAAGCTGAGGCCGTGACACT+AGG | - | chr6_3:763527-763546 | None:intergenic | 55.0% | |
| ! | GTGCAAGTTGGGGTTTGAGC+GGG | + | chr6_3:764288-764307 | Msa0932560:CDS | 55.0% |
| ! | GTGCTCGTCCGGATTTTCTG+CGG | + | chr6_3:764339-764358 | Msa0932560:CDS | 55.0% |
| ! | TGCTCGTCCGGATTTTCTGC+GGG | + | chr6_3:764340-764359 | Msa0932560:CDS | 55.0% |
| TGCTGAAGCAACTGCGGAAG+TGG | + | chr6_3:764625-764644 | Msa0932560:CDS | 55.0% | |
| GAAGCAACTGCGGAAGTGGT+TGG | + | chr6_3:764629-764648 | Msa0932560:CDS | 55.0% | |
| CAACTGCGGAAGTGGTTGGA+CGG | + | chr6_3:764633-764652 | Msa0932560:CDS | 55.0% | |
| GTGGTTGGACGGAGATCTAG+AGG | + | chr6_3:764644-764663 | Msa0932560:CDS | 55.0% | |
| GGCAGTCTGCAGCCATTATG+GGG | - | chr6_3:764818-764837 | None:intergenic | 55.0% | |
| ! | GCACGTGGGTTGTGTGTGCT+TGG | + | chr6_3:762314-762333 | Msa0932560:intron | 60.0% |
| ! | CAAGTTGGGGTTTGAGCGGG+AGG | + | chr6_3:764291-764310 | Msa0932560:CDS | 60.0% |
| ! | GCTCGTCCGGATTTTCTGCG+GGG | + | chr6_3:764341-764360 | Msa0932560:CDS | 60.0% |
| ! | GTCCGGATTTTCTGCGGGGT+CGG | + | chr6_3:764345-764364 | Msa0932560:CDS | 60.0% |
| ! | TCCGGATTTTCTGCGGGGTC+GGG | + | chr6_3:764346-764365 | Msa0932560:CDS | 60.0% |
| TCCCGACCCCGCAGAAAATC+CGG | - | chr6_3:764350-764369 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 759087 | 765026 | 759087 | ID=Msa0932560;Name=Msa0932560 |
| chr6_3 | mRNA | 759087 | 765026 | 759087 | ID=Msa0932560-mRNA-1;Parent=Msa0932560;Name=Msa0932560-mRNA-1;_AED=0.01;_eAED=0.01;_QI=91|1|1|1|1|1|2|170|228 |
| chr6_3 | exon | 759087 | 759274 | 759087 | ID=Msa0932560-mRNA-1:exon:257;Parent=Msa0932560-mRNA-1 |
| chr6_3 | exon | 764267 | 765026 | 764267 | ID=Msa0932560-mRNA-1:exon:258;Parent=Msa0932560-mRNA-1 |
| chr6_3 | five_prime_UTR | 759087 | 759177 | 759087 | ID=Msa0932560-mRNA-1:five_prime_utr;Parent=Msa0932560-mRNA-1 |
| chr6_3 | CDS | 759178 | 759274 | 759178 | ID=Msa0932560-mRNA-1:cds;Parent=Msa0932560-mRNA-1 |
| chr6_3 | CDS | 764267 | 764856 | 764267 | ID=Msa0932560-mRNA-1:cds;Parent=Msa0932560-mRNA-1 |
| chr6_3 | three_prime_UTR | 764857 | 765026 | 764857 | ID=Msa0932560-mRNA-1:three_prime_utr;Parent=Msa0932560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
